Search of human proteins with 239756873

Search of human proteins with 239756873

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239756873 PREDICTED: hypothetical protein [Homo sapiens]
         (123 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239756873 PREDICTED: hypothetical protein [Homo sapiens]           255   5e-69
gi|239751367 PREDICTED: hypothetical protein XP_002347820 [Homo ...   254   1e-68
gi|239745876 PREDICTED: hypothetical protein XP_002343570 [Homo ...   254   1e-68
gi|188536004 zinc finger protein 469 [Homo sapiens]                    31   0.27 
gi|21361831 partitioning-defective protein 3 homolog [Homo sapiens]    28   1.8  
gi|4826694 integral membrane protein DGCR2 [Homo sapiens]              27   3.9  
gi|4502607 cholecystokinin A receptor [Homo sapiens]                   27   3.9  
gi|217272865 myotubularin related protein 4 [Homo sapiens]             27   3.9  
gi|18426913 drebrin 1 isoform b [Homo sapiens]                         27   3.9  
gi|18426915 drebrin 1 isoform a [Homo sapiens]                         27   3.9  
gi|58218970 protease, serine, 36 [Homo sapiens]                        27   3.9  
gi|45120119 microtubule associated serine/threonine kinase 1 [Ho...    27   5.1  
gi|62000702 diacylglycerol kinase kappa [Homo sapiens]                 27   5.1  
gi|148529023 hypothetical protein LOC23172 [Homo sapiens]              26   6.7  
gi|116063562 FERM domain containing 4A [Homo sapiens]                  26   6.7  
gi|14042933 transmembrane protein 133 [Homo sapiens]                   26   6.7  
gi|148746220 spermatogenesis associated, serine-rich 2 [Homo sap...    26   8.7  
gi|117938328 l(3)mbt-like isoform I [Homo sapiens]                     26   8.7  
gi|117938330 l(3)mbt-like isoform II [Homo sapiens]                    26   8.7  

>gi|239756873 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 123

 Score =  255 bits (652), Expect = 5e-69
 Identities = 123/123 (100%), Positives = 123/123 (100%)

Query: 1   MVIWRSERLVAAEILRLLSLVMNLLAAYSRSSSRNCPLLYGMRFLRPRRKAQASGGCCPL 60
           MVIWRSERLVAAEILRLLSLVMNLLAAYSRSSSRNCPLLYGMRFLRPRRKAQASGGCCPL
Sbjct: 1   MVIWRSERLVAAEILRLLSLVMNLLAAYSRSSSRNCPLLYGMRFLRPRRKAQASGGCCPL 60

Query: 61  EYLQMLPSKRDLVGSVLPGNTSGCSSHQREPRTGNCPQATGSHVAVLQEHPESAPQTRPG 120
           EYLQMLPSKRDLVGSVLPGNTSGCSSHQREPRTGNCPQATGSHVAVLQEHPESAPQTRPG
Sbjct: 61  EYLQMLPSKRDLVGSVLPGNTSGCSSHQREPRTGNCPQATGSHVAVLQEHPESAPQTRPG 120

Query: 121 NWP 123
           NWP
Sbjct: 121 NWP 123


>gi|239751367 PREDICTED: hypothetical protein XP_002347820 [Homo
           sapiens]
          Length = 123

 Score =  254 bits (649), Expect = 1e-68
 Identities = 122/123 (99%), Positives = 123/123 (100%)

Query: 1   MVIWRSERLVAAEILRLLSLVMNLLAAYSRSSSRNCPLLYGMRFLRPRRKAQASGGCCPL 60
           MVIWRSERLVAAEILRLLSLVMNLLAAYSRSSSRNCPLLYGMRFLRPRRKAQASGGCCPL
Sbjct: 1   MVIWRSERLVAAEILRLLSLVMNLLAAYSRSSSRNCPLLYGMRFLRPRRKAQASGGCCPL 60

Query: 61  EYLQMLPSKRDLVGSVLPGNTSGCSSHQREPRTGNCPQATGSHVAVLQEHPESAPQTRPG 120
           EYLQMLPSKRDLVGSVLPGNTSGCSSHQREP+TGNCPQATGSHVAVLQEHPESAPQTRPG
Sbjct: 61  EYLQMLPSKRDLVGSVLPGNTSGCSSHQREPKTGNCPQATGSHVAVLQEHPESAPQTRPG 120

Query: 121 NWP 123
           NWP
Sbjct: 121 NWP 123


>gi|239745876 PREDICTED: hypothetical protein XP_002343570 [Homo
           sapiens]
          Length = 123

 Score =  254 bits (649), Expect = 1e-68
 Identities = 122/123 (99%), Positives = 123/123 (100%)

Query: 1   MVIWRSERLVAAEILRLLSLVMNLLAAYSRSSSRNCPLLYGMRFLRPRRKAQASGGCCPL 60
           MVIWRSERLVAAEILRLLSLVMNLLAAYSRSSSRNCPLLYGMRFLRPRRKAQASGGCCPL
Sbjct: 1   MVIWRSERLVAAEILRLLSLVMNLLAAYSRSSSRNCPLLYGMRFLRPRRKAQASGGCCPL 60

Query: 61  EYLQMLPSKRDLVGSVLPGNTSGCSSHQREPRTGNCPQATGSHVAVLQEHPESAPQTRPG 120
           EYLQMLPSKRDLVGSVLPGNTSGCSSHQREP+TGNCPQATGSHVAVLQEHPESAPQTRPG
Sbjct: 61  EYLQMLPSKRDLVGSVLPGNTSGCSSHQREPKTGNCPQATGSHVAVLQEHPESAPQTRPG 120

Query: 121 NWP 123
           NWP
Sbjct: 121 NWP 123


>gi|188536004 zinc finger protein 469 [Homo sapiens]
          Length = 3925

 Score = 30.8 bits (68), Expect = 0.27
 Identities = 27/77 (35%), Positives = 35/77 (45%), Gaps = 11/77 (14%)

Query: 47   PRRKAQASGGCCPLEYLQMLPSKRDLVGSVLPGNTSGCSSHQREPRTGNCPQATGSHVAV 106
            P +KA+A  G         LPSKR  V   +PG+  G    +  PR  +   + GS  A+
Sbjct: 3431 PGQKARALEGT--------LPSKRRRVA--MPGSAPGPGEDRPPPRGSSPILSEGSLPAL 3480

Query: 107  LQEHPESAPQTRPGNWP 123
            L    E AP T  G WP
Sbjct: 3481 LHLCSEVAPSTTKG-WP 3496


>gi|21361831 partitioning-defective protein 3 homolog [Homo sapiens]
          Length = 1356

 Score = 28.1 bits (61), Expect = 1.8
 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)

Query: 80  NTSGCSSHQREPRTGNCPQATGSHVAVLQE-HPESAPQTRPGNWP 123
           N++G  + QR PR  + P+   SH  +    HP   P + P + P
Sbjct: 395 NSAGLHTVQRAPRLNHPPEQIDSHSRLPHSAHPSGKPPSAPASAP 439


>gi|4826694 integral membrane protein DGCR2 [Homo sapiens]
          Length = 550

 Score = 26.9 bits (58), Expect = 3.9
 Identities = 20/76 (26%), Positives = 28/76 (36%), Gaps = 12/76 (15%)

Query: 45  LRPRRKAQASGGCCPLEYLQMLPSKRDLVGSVLPGNTSGCSSHQREPRTGNCPQATGSHV 104
           LRP  +       C    +Q +P         LP    G ++ + E    NCP+ TG   
Sbjct: 24  LRPELRCNPGQFACRSGTIQCIP---------LPWQCDGWATCEDESDEANCPEVTGE-- 72

Query: 105 AVLQEHPESAPQTRPG 120
            V   H + A   R G
Sbjct: 73  -VRPHHGKEAVDPRQG 87


>gi|4502607 cholecystokinin A receptor [Homo sapiens]
          Length = 428

 Score = 26.9 bits (58), Expect = 3.9
 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 4/82 (4%)

Query: 4   WRSERLVAAEILRLLSLVMNLLAAYSRSSSRNCPLLYGMRFLRPRRKAQASGGCCPLEYL 63
           WR+    +AE  RL    ++ +   S +SS   P++Y     R R    A+  CCP    
Sbjct: 335 WRAYDTASAE-RRLSGTPISFILLLSYTSSCVNPIIYCFMNKRFRLGFMATFPCCP---N 390

Query: 64  QMLPSKRDLVGSVLPGNTSGCS 85
              P  R  VG    G T+G S
Sbjct: 391 PGPPGARGEVGEEEEGGTTGAS 412


>gi|217272865 myotubularin related protein 4 [Homo sapiens]
          Length = 1195

 Score = 26.9 bits (58), Expect = 3.9
 Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 16/83 (19%)

Query: 38  LLYGMRFLRPRRKA-QASGGCCPLEYLQMLPSKRDLVGSVLPGNTSGCSSHQREPRTGNC 96
           L YG    RP  K  +A+G C   ++ Q     R+ V S +      CSSH      G+C
Sbjct: 928 LSYGCCSKRPNSKQMRATGPCFGGQWAQ-----REGVKSPV------CSSHSN----GHC 972

Query: 97  PQATGSHVAVLQEHPESAPQTRP 119
               G +   L  HP+    T+P
Sbjct: 973 TGPGGKNQMWLSSHPKQVSSTKP 995


>gi|18426913 drebrin 1 isoform b [Homo sapiens]
          Length = 651

 Score = 26.9 bits (58), Expect = 3.9
 Identities = 15/39 (38%), Positives = 19/39 (48%)

Query: 78  PGNTSGCSSHQREPRTGNCPQATGSHVAVLQEHPESAPQ 116
           PGN  G S+ Q EPR    P  T   +A +    E AP+
Sbjct: 482 PGNGEGASTLQGEPRAPTPPSGTEVTLAEVPLLDEVAPE 520


>gi|18426915 drebrin 1 isoform a [Homo sapiens]
          Length = 649

 Score = 26.9 bits (58), Expect = 3.9
 Identities = 15/39 (38%), Positives = 19/39 (48%)

Query: 78  PGNTSGCSSHQREPRTGNCPQATGSHVAVLQEHPESAPQ 116
           PGN  G S+ Q EPR    P  T   +A +    E AP+
Sbjct: 480 PGNGEGASTLQGEPRAPTPPSGTEVTLAEVPLLDEVAPE 518


>gi|58218970 protease, serine, 36 [Homo sapiens]
          Length = 855

 Score = 26.9 bits (58), Expect = 3.9
 Identities = 16/50 (32%), Positives = 17/50 (34%), Gaps = 10/50 (20%)

Query: 74  GSVLPGNTSGCSSHQREPRTGNCPQATGSHVAVLQEHPESAPQTRPGNWP 123
           G   P       S  +EPR  NC  A           PE     RPG WP
Sbjct: 296 GPAFPTQPQKTQSDPQEPREENCTIAL----------PECGKAPRPGAWP 335


>gi|45120119 microtubule associated serine/threonine kinase 1 [Homo
            sapiens]
          Length = 1570

 Score = 26.6 bits (57), Expect = 5.1
 Identities = 23/65 (35%), Positives = 28/65 (43%), Gaps = 5/65 (7%)

Query: 54   SGGCCPLEYLQMLPSKRDLVGSVLPGNTSGCSSHQREPRTGNCPQATGSHVAVLQEHPES 113
            S G  PL  L   PS        LPG+T G SSH     T + P    S   V++  P+S
Sbjct: 1198 SAGNIPLSPLAHTPSPTQASPPPLPGHTVG-SSH----TTQSFPAKLHSSPPVVRPRPKS 1252

Query: 114  APQTR 118
            A   R
Sbjct: 1253 AEPPR 1257


>gi|62000702 diacylglycerol kinase kappa [Homo sapiens]
          Length = 1271

 Score = 26.6 bits (57), Expect = 5.1
 Identities = 11/30 (36%), Positives = 13/30 (43%)

Query: 94  GNCPQATGSHVAVLQEHPESAPQTRPGNWP 123
           G CP+AT      L   P   P T P + P
Sbjct: 64  GPCPEATSESATELYTEPTPEPATEPASEP 93


>gi|148529023 hypothetical protein LOC23172 [Homo sapiens]
          Length = 415

 Score = 26.2 bits (56), Expect = 6.7
 Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 9/55 (16%)

Query: 60  LEYLQMLPSKR--DLVGSVLP--GNTSGCSSHQREPRTGNCPQATGSHVAVLQEH 110
           LEY+   P++R    +   +P  GNTS     Q+E +  + P  + S+  V++EH
Sbjct: 143 LEYVLFRPNRRYNQRISLAIPNLGNTS-----QQEYKVSSVPNTSQSYAKVIKEH 192


>gi|116063562 FERM domain containing 4A [Homo sapiens]
          Length = 1039

 Score = 26.2 bits (56), Expect = 6.7
 Identities = 11/20 (55%), Positives = 14/20 (70%)

Query: 82  SGCSSHQREPRTGNCPQATG 101
           S  SSH+R P TG+C +A G
Sbjct: 630 SHSSSHKRFPSTGSCAEAGG 649


>gi|14042933 transmembrane protein 133 [Homo sapiens]
          Length = 129

 Score = 26.2 bits (56), Expect = 6.7
 Identities = 10/23 (43%), Positives = 13/23 (56%)

Query: 78  PGNTSGCSSHQREPRTGNCPQAT 100
           PGN    S H++E R   CP+ T
Sbjct: 9   PGNHISWSGHEKEHRLDYCPEVT 31


>gi|148746220 spermatogenesis associated, serine-rich 2 [Homo
           sapiens]
          Length = 545

 Score = 25.8 bits (55), Expect = 8.7
 Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 10/56 (17%)

Query: 76  VLPGNTSGCSSHQREPRTGNCPQATGSHVAVLQ----------EHPESAPQTRPGN 121
           VLPGN  G   ++ + +  N P   G H ++ +             +SAP   PGN
Sbjct: 443 VLPGNRRGGQGYRPQGQKSNDPMNQGRHDSMGRYRNSSWYSSGSRYQSAPSQAPGN 498


>gi|117938328 l(3)mbt-like isoform I [Homo sapiens]
          Length = 772

 Score = 25.8 bits (55), Expect = 8.7
 Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 12/53 (22%)

Query: 45  LRPRRKAQAS-GGCCPLEYLQMLPSKRDLVGSVLPGNTSGCSSHQREPRTGNC 96
           L PR  + AS GGC PL Y + LP  R          TS  S H R+  T  C
Sbjct: 518 LGPREPSSASPGGCPPLSY-RSLPHTR----------TSKYSFHHRKCPTPGC 559


>gi|117938330 l(3)mbt-like isoform II [Homo sapiens]
          Length = 738

 Score = 25.8 bits (55), Expect = 8.7
 Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 12/53 (22%)

Query: 45  LRPRRKAQAS-GGCCPLEYLQMLPSKRDLVGSVLPGNTSGCSSHQREPRTGNC 96
           L PR  + AS GGC PL Y + LP  R          TS  S H R+  T  C
Sbjct: 518 LGPREPSSASPGGCPPLSY-RSLPHTR----------TSKYSFHHRKCPTPGC 559


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.133    0.417 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,240,233
Number of Sequences: 37866
Number of extensions: 227965
Number of successful extensions: 615
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 607
Number of HSP's gapped (non-prelim): 19
length of query: 123
length of database: 18,247,518
effective HSP length: 89
effective length of query: 34
effective length of database: 14,877,444
effective search space: 505833096
effective search space used: 505833096
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.