Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: TMEM133 Sequence: fasta or formatted (129aa) NCBI GI: 14042933
Description:

transmembrane protein 133

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             1.6          2           1
 C cysteine            3.9          5           1
 D aspartate           1.6          2           1
 E glutamate           3.9          5           1
 F phenylalanine       6.2          8           1
 G glycine             6.2          8           1
 H histidine           3.9          5           2
 I isoleucine          5.4          7           1
 K lysine              4.7          6           1
 L leucine            15.5         20           3
 M methionine          1.6          2           1
 N asparagine          7.8         10           2
 P proline             7.8         10           1
 Q glutamine           1.6          2           1
 R arginine            3.1          4           2
 S serine              7.0          9           2
 T threonine           7.0          9           1
 V valine              7.0          9           1
 W tryptophan          0.8          1           1
 Y tyrosine            3.9          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transmembrane protein 133 
SMG1                  0.008   PI-3-kinase-related kinase SMG-1 
SLC7A6                0.008   solute carrier family 7 (cationic amino acid transp...
SLC7A6                0.008   solute carrier family 7 (cationic amino acid transp...
LOC100293633          0.008   PREDICTED: hypothetical protein 
LOC100291448          0.008   PREDICTED: hypothetical protein XP_002348241 
LOC100289458          0.008   PREDICTED: hypothetical protein XP_002342265 
OR8A1                 0.008   olfactory receptor, family 8, subfamily A, member 1 ...
TBCKL                 0.008   TBC domain-containing protein kinase-like 
PREX2                 0.008   DEP domain containing 2 isoform a 
LOC100292462          0.004   PREDICTED: hypothetical protein 
MOV10                 0.004   Mov10, Moloney leukemia virus 10, homolog 
MOV10                 0.004   Mov10, Moloney leukemia virus 10, homolog 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press