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Search of human proteins with 239755420
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239755420 PREDICTED: hypothetical protein [Homo sapiens]
(171 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239755420 PREDICTED: hypothetical protein [Homo sapiens] 342 9e-95
gi|239749896 PREDICTED: hypothetical protein XP_002347199 isofor... 342 9e-95
gi|239749894 PREDICTED: hypothetical protein XP_002347198 isofor... 342 9e-95
gi|239744196 PREDICTED: hypothetical protein XP_002343054 [Homo ... 342 9e-95
gi|239755402 PREDICTED: hypothetical protein [Homo sapiens] 33 0.12
gi|239749910 PREDICTED: hypothetical protein XP_002347211 [Homo ... 33 0.12
gi|239744211 PREDICTED: hypothetical protein XP_002343075 [Homo ... 33 0.12
gi|239756311 PREDICTED: hypothetical protein [Homo sapiens] 31 0.46
gi|239754979 PREDICTED: hypothetical protein [Homo sapiens] 30 1.0
gi|239751194 PREDICTED: hypothetical protein XP_002347745 [Homo ... 30 1.3
gi|239745684 PREDICTED: hypothetical protein XP_002343515 [Homo ... 30 1.3
gi|239753842 PREDICTED: similar to hCG2040199 [Homo sapiens] 29 1.7
gi|169166778 PREDICTED: similar to hCG2040199 [Homo sapiens] 29 1.7
gi|169166363 PREDICTED: similar to hCG2040199 [Homo sapiens] 29 1.7
gi|76056882 calcium binding protein 1 isoform 3 [Homo sapiens] 29 1.7
gi|239749721 PREDICTED: hypothetical protein [Homo sapiens] 29 2.3
gi|239743976 PREDICTED: hypothetical protein [Homo sapiens] 29 2.3
gi|150170732 hypothetical protein LOC374470 [Homo sapiens] 29 2.3
gi|150170675 hypothetical protein LOC374470 [Homo sapiens] 29 2.3
gi|93141033 PAX interacting protein 1 [Homo sapiens] 28 3.0
gi|156564238 hypothetical protein LOC129293 [Homo sapiens] 28 3.0
gi|169164783 PREDICTED: hypothetical protein [Homo sapiens] 28 3.9
gi|169163482 PREDICTED: hypothetical protein [Homo sapiens] 28 3.9
gi|56549696 E1A binding protein p400 [Homo sapiens] 28 5.0
gi|170016061 spectrin, beta, non-erythrocytic 5 [Homo sapiens] 28 5.0
gi|153792042 G protein-coupled receptor 178 [Homo sapiens] 28 5.0
gi|239755599 PREDICTED: hypothetical protein XP_002344618 [Homo ... 27 6.6
gi|239750090 PREDICTED: hypothetical protein XP_002347290 [Homo ... 27 6.6
gi|239744399 PREDICTED: hypothetical protein XP_002343154 [Homo ... 27 6.6
gi|18644886 forkhead box P1 isoform 1 [Homo sapiens] 27 6.6
>gi|239755420 PREDICTED: hypothetical protein [Homo sapiens]
Length = 171
Score = 342 bits (877), Expect = 9e-95
Identities = 171/171 (100%), Positives = 171/171 (100%)
Query: 1 MSTPRFRKRLRLDSATWWQCRTRSERSTGQYSANAPDTVASDAEAAGEVKVVEFWAVPSQ 60
MSTPRFRKRLRLDSATWWQCRTRSERSTGQYSANAPDTVASDAEAAGEVKVVEFWAVPSQ
Sbjct: 1 MSTPRFRKRLRLDSATWWQCRTRSERSTGQYSANAPDTVASDAEAAGEVKVVEFWAVPSQ 60
Query: 61 LLNRGVPHVGVDGQREAAETSAAPLRQVHDGLVLELAAGGEIQLLQGRAAISEAAQRQPV 120
LLNRGVPHVGVDGQREAAETSAAPLRQVHDGLVLELAAGGEIQLLQGRAAISEAAQRQPV
Sbjct: 61 LLNRGVPHVGVDGQREAAETSAAPLRQVHDGLVLELAAGGEIQLLQGRAAISEAAQRQPV 120
Query: 121 HPVTVRERQALQAWAALGQSPKRPATQLPAAAQRHTPQLRIPRQHRHQVLV 171
HPVTVRERQALQAWAALGQSPKRPATQLPAAAQRHTPQLRIPRQHRHQVLV
Sbjct: 121 HPVTVRERQALQAWAALGQSPKRPATQLPAAAQRHTPQLRIPRQHRHQVLV 171
>gi|239749896 PREDICTED: hypothetical protein XP_002347199 isoform 2
[Homo sapiens]
Length = 171
Score = 342 bits (877), Expect = 9e-95
Identities = 171/171 (100%), Positives = 171/171 (100%)
Query: 1 MSTPRFRKRLRLDSATWWQCRTRSERSTGQYSANAPDTVASDAEAAGEVKVVEFWAVPSQ 60
MSTPRFRKRLRLDSATWWQCRTRSERSTGQYSANAPDTVASDAEAAGEVKVVEFWAVPSQ
Sbjct: 1 MSTPRFRKRLRLDSATWWQCRTRSERSTGQYSANAPDTVASDAEAAGEVKVVEFWAVPSQ 60
Query: 61 LLNRGVPHVGVDGQREAAETSAAPLRQVHDGLVLELAAGGEIQLLQGRAAISEAAQRQPV 120
LLNRGVPHVGVDGQREAAETSAAPLRQVHDGLVLELAAGGEIQLLQGRAAISEAAQRQPV
Sbjct: 61 LLNRGVPHVGVDGQREAAETSAAPLRQVHDGLVLELAAGGEIQLLQGRAAISEAAQRQPV 120
Query: 121 HPVTVRERQALQAWAALGQSPKRPATQLPAAAQRHTPQLRIPRQHRHQVLV 171
HPVTVRERQALQAWAALGQSPKRPATQLPAAAQRHTPQLRIPRQHRHQVLV
Sbjct: 121 HPVTVRERQALQAWAALGQSPKRPATQLPAAAQRHTPQLRIPRQHRHQVLV 171
>gi|239749894 PREDICTED: hypothetical protein XP_002347198 isoform 1
[Homo sapiens]
Length = 171
Score = 342 bits (877), Expect = 9e-95
Identities = 171/171 (100%), Positives = 171/171 (100%)
Query: 1 MSTPRFRKRLRLDSATWWQCRTRSERSTGQYSANAPDTVASDAEAAGEVKVVEFWAVPSQ 60
MSTPRFRKRLRLDSATWWQCRTRSERSTGQYSANAPDTVASDAEAAGEVKVVEFWAVPSQ
Sbjct: 1 MSTPRFRKRLRLDSATWWQCRTRSERSTGQYSANAPDTVASDAEAAGEVKVVEFWAVPSQ 60
Query: 61 LLNRGVPHVGVDGQREAAETSAAPLRQVHDGLVLELAAGGEIQLLQGRAAISEAAQRQPV 120
LLNRGVPHVGVDGQREAAETSAAPLRQVHDGLVLELAAGGEIQLLQGRAAISEAAQRQPV
Sbjct: 61 LLNRGVPHVGVDGQREAAETSAAPLRQVHDGLVLELAAGGEIQLLQGRAAISEAAQRQPV 120
Query: 121 HPVTVRERQALQAWAALGQSPKRPATQLPAAAQRHTPQLRIPRQHRHQVLV 171
HPVTVRERQALQAWAALGQSPKRPATQLPAAAQRHTPQLRIPRQHRHQVLV
Sbjct: 121 HPVTVRERQALQAWAALGQSPKRPATQLPAAAQRHTPQLRIPRQHRHQVLV 171
>gi|239744196 PREDICTED: hypothetical protein XP_002343054 [Homo
sapiens]
Length = 171
Score = 342 bits (877), Expect = 9e-95
Identities = 171/171 (100%), Positives = 171/171 (100%)
Query: 1 MSTPRFRKRLRLDSATWWQCRTRSERSTGQYSANAPDTVASDAEAAGEVKVVEFWAVPSQ 60
MSTPRFRKRLRLDSATWWQCRTRSERSTGQYSANAPDTVASDAEAAGEVKVVEFWAVPSQ
Sbjct: 1 MSTPRFRKRLRLDSATWWQCRTRSERSTGQYSANAPDTVASDAEAAGEVKVVEFWAVPSQ 60
Query: 61 LLNRGVPHVGVDGQREAAETSAAPLRQVHDGLVLELAAGGEIQLLQGRAAISEAAQRQPV 120
LLNRGVPHVGVDGQREAAETSAAPLRQVHDGLVLELAAGGEIQLLQGRAAISEAAQRQPV
Sbjct: 61 LLNRGVPHVGVDGQREAAETSAAPLRQVHDGLVLELAAGGEIQLLQGRAAISEAAQRQPV 120
Query: 121 HPVTVRERQALQAWAALGQSPKRPATQLPAAAQRHTPQLRIPRQHRHQVLV 171
HPVTVRERQALQAWAALGQSPKRPATQLPAAAQRHTPQLRIPRQHRHQVLV
Sbjct: 121 HPVTVRERQALQAWAALGQSPKRPATQLPAAAQRHTPQLRIPRQHRHQVLV 171
>gi|239755402 PREDICTED: hypothetical protein [Homo sapiens]
Length = 321
Score = 33.1 bits (74), Expect = 0.12
Identities = 35/117 (29%), Positives = 48/117 (41%), Gaps = 22/117 (18%)
Query: 65 GVPHVGVDGQREAAETSAAPLRQVHDGLVLELAAGGEIQ-------LLQGRAAISEAAQR 117
G VG + QR+A P ++VH V GGE + LQ +++AA
Sbjct: 154 GQHSVGAEAQRDA------PPQRVHQHDVAVHCDGGEREHRHIDGDRLQEEDQVAQAAAE 207
Query: 118 QP---VHPVTVRERQALQAWAALGQSPKRPATQLPAAAQRHTPQLRIPRQHRHQVLV 171
P + + RER A A +GQ Q+ RH Q PR H+HQ V
Sbjct: 208 HPAAWLEGIGQRERHAGGAHEHVGQG------QVADEEVRHVVQPAHPRDHQHQQAV 258
>gi|239749910 PREDICTED: hypothetical protein XP_002347211 [Homo
sapiens]
Length = 321
Score = 33.1 bits (74), Expect = 0.12
Identities = 35/117 (29%), Positives = 48/117 (41%), Gaps = 22/117 (18%)
Query: 65 GVPHVGVDGQREAAETSAAPLRQVHDGLVLELAAGGEIQ-------LLQGRAAISEAAQR 117
G VG + QR+A P ++VH V GGE + LQ +++AA
Sbjct: 154 GQHSVGAEAQRDA------PPQRVHQHDVAVHCDGGEREHRHIDGDRLQEEDQVAQAAAE 207
Query: 118 QP---VHPVTVRERQALQAWAALGQSPKRPATQLPAAAQRHTPQLRIPRQHRHQVLV 171
P + + RER A A +GQ Q+ RH Q PR H+HQ V
Sbjct: 208 HPAAWLEGIGQRERHAGGAHEHVGQG------QVADEEVRHVVQPAHPRDHQHQQAV 258
>gi|239744211 PREDICTED: hypothetical protein XP_002343075 [Homo
sapiens]
Length = 321
Score = 33.1 bits (74), Expect = 0.12
Identities = 35/117 (29%), Positives = 48/117 (41%), Gaps = 22/117 (18%)
Query: 65 GVPHVGVDGQREAAETSAAPLRQVHDGLVLELAAGGEIQ-------LLQGRAAISEAAQR 117
G VG + QR+A P ++VH V GGE + LQ +++AA
Sbjct: 154 GQHSVGAEAQRDA------PPQRVHQHDVAVHCDGGEREHRHIDGDRLQEEDQVAQAAAE 207
Query: 118 QP---VHPVTVRERQALQAWAALGQSPKRPATQLPAAAQRHTPQLRIPRQHRHQVLV 171
P + + RER A A +GQ Q+ RH Q PR H+HQ V
Sbjct: 208 HPAAWLEGIGQRERHAGGAHEHVGQG------QVADEEVRHVVQPAHPRDHQHQQAV 258
>gi|239756311 PREDICTED: hypothetical protein [Homo sapiens]
Length = 151
Score = 31.2 bits (69), Expect = 0.46
Identities = 26/90 (28%), Positives = 36/90 (40%), Gaps = 6/90 (6%)
Query: 73 GQREAAETSAAPLRQVHDGLVLELAAGGEIQLLQGRAAISEAAQRQPVHPVTVRERQALQ 132
GQ A AA + H +AA +Q LQ +QR V + Q Q
Sbjct: 63 GQARARGAQAAQAGRAH------VAAEVHVQCLQRAPVRRHGSQRAVGDARAVLQAQCAQ 116
Query: 133 AWAALGQSPKRPATQLPAAAQRHTPQLRIP 162
AWAA Q+ + + AA +R Q+ P
Sbjct: 117 AWAAAQQARQAVVGNVAAARERDGCQVGAP 146
>gi|239754979 PREDICTED: hypothetical protein [Homo sapiens]
Length = 780
Score = 30.0 bits (66), Expect = 1.0
Identities = 28/92 (30%), Positives = 38/92 (41%), Gaps = 5/92 (5%)
Query: 76 EAAETSAAPLRQVHDGLVLELAAGGEIQLLQGRAAISEAAQRQPVHPVTVRERQALQAWA 135
E A A + + L L G E+ L RA EA + VH R +A +A
Sbjct: 560 EVAGLEAEVVAVAEERLPRHLPRGREV-LHGARALGREAVPLEGVHLQVPRLEEAPRA-- 616
Query: 136 ALGQSPKRPATQLPAAAQRHTPQLRIPRQHRH 167
+ P RP L A +R P++R R RH
Sbjct: 617 --RELPSRPGLGLQAPRERPQPRVRFQRAPRH 646
>gi|239751194 PREDICTED: hypothetical protein XP_002347745 [Homo
sapiens]
Length = 325
Score = 29.6 bits (65), Expect = 1.3
Identities = 32/111 (28%), Positives = 45/111 (40%), Gaps = 15/111 (13%)
Query: 69 VGVDGQREAAETSAAPLRQVHDGLVLELAAGGEIQLLQGRA-------AISEAAQRQPVH 121
+G G R+ + AA R+ +G L+ + QGR A A+QR H
Sbjct: 45 LGGSGTRQLQQ--AAATREGEEGEAGGLSDQPGVMRTQGRTVGVAALHARVRASQRAGRH 102
Query: 122 PVTVR----ERQALQAWAALGQSPKRPATQLPAAAQRHTPQLRIPRQHRHQ 168
PV +R Q A ++P R P Q+ P L PR+H HQ
Sbjct: 103 PVEAELGPAQRAVQQEQRARARAPGRVPGGRPRLLQQSRPPL--PRRHGHQ 151
>gi|239745684 PREDICTED: hypothetical protein XP_002343515 [Homo
sapiens]
Length = 368
Score = 29.6 bits (65), Expect = 1.3
Identities = 32/111 (28%), Positives = 45/111 (40%), Gaps = 15/111 (13%)
Query: 69 VGVDGQREAAETSAAPLRQVHDGLVLELAAGGEIQLLQGRA-------AISEAAQRQPVH 121
+G G R+ + AA R+ +G L+ + QGR A A+QR H
Sbjct: 88 LGGSGTRQLQQ--AAATREGEEGEAGGLSDQPGVMRTQGRTVGVAALHARVRASQRAGRH 145
Query: 122 PVTVR----ERQALQAWAALGQSPKRPATQLPAAAQRHTPQLRIPRQHRHQ 168
PV +R Q A ++P R P Q+ P L PR+H HQ
Sbjct: 146 PVEAELGPAQRAVQQEQRARARAPGRVPGGRPRLLQQSRPPL--PRRHGHQ 194
>gi|239753842 PREDICTED: similar to hCG2040199 [Homo sapiens]
Length = 315
Score = 29.3 bits (64), Expect = 1.7
Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 46 AGEVKVVEFWAVPSQLLNRGVPHVGVDGQREAAETSAAPLRQVHDGLVLELAAGGEIQLL 105
A + K +E W PS+L+N G V G ++ + +++ ++ G +Q+
Sbjct: 155 ASDFKDMENWRTPSELVNTGYQSVLSQGNKKPQDRKEKRREELNTSMMYYYDDGTGVQVY 214
Query: 106 Q-GRAAISEAAQRQPVH 121
+ A + E +RQ H
Sbjct: 215 RVEEALLKECIKRQIEH 231
>gi|169166778 PREDICTED: similar to hCG2040199 [Homo sapiens]
Length = 315
Score = 29.3 bits (64), Expect = 1.7
Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 46 AGEVKVVEFWAVPSQLLNRGVPHVGVDGQREAAETSAAPLRQVHDGLVLELAAGGEIQLL 105
A + K +E W PS+L+N G V G ++ + +++ ++ G +Q+
Sbjct: 155 ASDFKDMENWRTPSELVNTGYQSVLSQGNKKPQDRKEKRREELNTSMMYYYDDGTGVQVY 214
Query: 106 Q-GRAAISEAAQRQPVH 121
+ A + E +RQ H
Sbjct: 215 RVEEALLKECIKRQIEH 231
>gi|169166363 PREDICTED: similar to hCG2040199 [Homo sapiens]
Length = 315
Score = 29.3 bits (64), Expect = 1.7
Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 46 AGEVKVVEFWAVPSQLLNRGVPHVGVDGQREAAETSAAPLRQVHDGLVLELAAGGEIQLL 105
A + K +E W PS+L+N G V G ++ + +++ ++ G +Q+
Sbjct: 155 ASDFKDMENWRTPSELVNTGYQSVLSQGNKKPQDRKEKRREELNTSMMYYYDDGTGVQVY 214
Query: 106 Q-GRAAISEAAQRQPVH 121
+ A + E +RQ H
Sbjct: 215 RVEEALLKECIKRQIEH 231
>gi|76056882 calcium binding protein 1 isoform 3 [Homo sapiens]
Length = 370
Score = 29.3 bits (64), Expect = 1.7
Identities = 17/50 (34%), Positives = 25/50 (50%)
Query: 113 EAAQRQPVHPVTVRERQALQAWAALGQSPKRPATQLPAAAQRHTPQLRIP 162
+ + R+P+ RE A + L Q+ RP LPAAA R +P +P
Sbjct: 114 DPSSRRPLCRPAPREEGARGSQRVLPQAHCRPREALPAAASRPSPSSPLP 163
>gi|239749721 PREDICTED: hypothetical protein [Homo sapiens]
Length = 378
Score = 28.9 bits (63), Expect = 2.3
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 107 GRAAISEAAQRQPVHPVTVRE-RQALQAWAALGQSPKRPATQLPAAAQRHTPQLRIP 162
G+A ++ Q HP R R+ L + LG P RP QLP AA +P+LR P
Sbjct: 24 GKARPPSSSGDQRRHPQLSRPPRRDLTGGSDLGPPP-RPVPQLPDAALPLSPELRRP 79
>gi|239743976 PREDICTED: hypothetical protein [Homo sapiens]
Length = 378
Score = 28.9 bits (63), Expect = 2.3
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 107 GRAAISEAAQRQPVHPVTVRE-RQALQAWAALGQSPKRPATQLPAAAQRHTPQLRIP 162
G+A ++ Q HP R R+ L + LG P RP QLP AA +P+LR P
Sbjct: 24 GKARPPSSSGDQRRHPQLSRPPRRDLTGGSDLGPPP-RPVPQLPDAALPLSPELRRP 79
>gi|150170732 hypothetical protein LOC374470 [Homo sapiens]
Length = 360
Score = 28.9 bits (63), Expect = 2.3
Identities = 35/143 (24%), Positives = 59/143 (41%), Gaps = 11/143 (7%)
Query: 22 TRSERSTGQYSANAPDTVASDAEAAGEVKVVEFWAVPSQLLNRGVPHVGVDGQREAAETS 81
+R R GQ ++ S A + + + P L + G + ++ + A +
Sbjct: 193 SRHTRPKGQPLSSPKKNSGSAARPSTAIGLCRRSQTPGALQSTGPSNTELEPEERMAVPA 252
Query: 82 AAPLRQVH-DGLVLEL--AAGGEIQLLQGRAAISEAAQRQPVHPVTVRERQALQAWAALG 138
A Q H D + L A+G + G+ A++ A + P HP T R+R+ QA +L
Sbjct: 253 GA---QAHPDDIQSRLLGASGNPV----GKGAVAMAPEMLPKHPHTPRDRRP-QADTSLH 304
Query: 139 QSPKRPATQLPAAAQRHTPQLRI 161
+ L A A H P R+
Sbjct: 305 GNLAGAPLPLLAGASTHFPSKRL 327
>gi|150170675 hypothetical protein LOC374470 [Homo sapiens]
Length = 360
Score = 28.9 bits (63), Expect = 2.3
Identities = 35/143 (24%), Positives = 59/143 (41%), Gaps = 11/143 (7%)
Query: 22 TRSERSTGQYSANAPDTVASDAEAAGEVKVVEFWAVPSQLLNRGVPHVGVDGQREAAETS 81
+R R GQ ++ S A + + + P L + G + ++ + A +
Sbjct: 193 SRHTRPKGQPLSSPKKNSGSAARPSTAIGLCRRSQTPGALQSTGPSNTELEPEERMAVPA 252
Query: 82 AAPLRQVH-DGLVLEL--AAGGEIQLLQGRAAISEAAQRQPVHPVTVRERQALQAWAALG 138
A Q H D + L A+G + G+ A++ A + P HP T R+R+ QA +L
Sbjct: 253 GA---QAHPDDIQSRLLGASGNPV----GKGAVAMAPEMLPKHPHTPRDRRP-QADTSLH 304
Query: 139 QSPKRPATQLPAAAQRHTPQLRI 161
+ L A A H P R+
Sbjct: 305 GNLAGAPLPLLAGASTHFPSKRL 327
>gi|93141033 PAX interacting protein 1 [Homo sapiens]
Length = 1069
Score = 28.5 bits (62), Expect = 3.0
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 3/92 (3%)
Query: 79 ETSAAPLRQVHDGLVLELAAGGEIQLLQGRAAISEAAQRQPVHPVTVRERQALQA--WAA 136
+ A +Q H L L+ ++Q Q + + +QP HP + +++Q QA
Sbjct: 404 QQQAQQQQQQHPVLHLQPQQIMQLQQQQQQQISQQPYPQQPPHPFSQQQQQQQQAHPHQF 463
Query: 137 LGQSPKRPATQLPAAAQRHTPQLRI-PRQHRH 167
Q + P QL Q H PQ ++ P Q +H
Sbjct: 464 SQQQLQFPQQQLHPPQQLHRPQQQLQPFQQQH 495
>gi|156564238 hypothetical protein LOC129293 [Homo sapiens]
Length = 456
Score = 28.5 bits (62), Expect = 3.0
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 7/54 (12%)
Query: 115 AQRQPVHPVTVRERQALQAWAALGQSPKRPATQLPAAAQRHTPQLRIPRQ-HRH 167
+QR+P R RQ W L +S P Q+P + + +LR+PR+ H H
Sbjct: 377 SQRRP------RLRQFSDLWVRLEESDIVPQLQVPVLDRHISTELRLPRRGHSH 424
>gi|169164783 PREDICTED: hypothetical protein [Homo sapiens]
Length = 396
Score = 28.1 bits (61), Expect = 3.9
Identities = 27/82 (32%), Positives = 35/82 (42%), Gaps = 14/82 (17%)
Query: 80 TSAAPLRQVHDGLVLELAAGGEIQLLQGRAAISEAAQRQPVHPVT-VRERQALQAWAALG 138
T+ AP R+V G+V E AA L QRQ +H VRE++ A G
Sbjct: 198 TAGAPARRV--GVVAERAASAACSL-----------QRQRLHARRRVREQRGRVAREVRG 244
Query: 139 QSPKRPATQLPAAAQRHTPQLR 160
+ R P +RH P LR
Sbjct: 245 RVIGRGREVQPVVGRRHKPALR 266
>gi|169163482 PREDICTED: hypothetical protein [Homo sapiens]
Length = 396
Score = 28.1 bits (61), Expect = 3.9
Identities = 27/82 (32%), Positives = 35/82 (42%), Gaps = 14/82 (17%)
Query: 80 TSAAPLRQVHDGLVLELAAGGEIQLLQGRAAISEAAQRQPVHPVT-VRERQALQAWAALG 138
T+ AP R+V G+V E AA L QRQ +H VRE++ A G
Sbjct: 198 TAGAPARRV--GVVAERAASAACSL-----------QRQRLHARRRVREQRGRVAREVRG 244
Query: 139 QSPKRPATQLPAAAQRHTPQLR 160
+ R P +RH P LR
Sbjct: 245 RVIGRGREVQPVVGRRHKPALR 266
>gi|56549696 E1A binding protein p400 [Homo sapiens]
Length = 3122
Score = 27.7 bits (60), Expect = 5.0
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Query: 107 GRAAISEAAQRQPVHP---VTVRERQALQAWAALGQSPKRPATQLPAAA 152
G I++ AQ Q HP +TVRER+ Q G + Q PAAA
Sbjct: 197 GLTQIAQGAQVQLQHPGTPITVRERRPSQPHTQSGGTIHHLGPQSPAAA 245
>gi|170016061 spectrin, beta, non-erythrocytic 5 [Homo sapiens]
Length = 3639
Score = 27.7 bits (60), Expect = 5.0
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Query: 89 HDGLVLELAAGGEIQL---LQGRAAISEAAQRQPVHPVTVRERQALQAWAALGQSPKRPA 145
H GL EL G E QL L+ + + H V R++ QAWA L + ++
Sbjct: 1843 HQGLERELV-GTERQLQELLETAGRVQKLCPGPQAHAVQQRQQAVTQAWAVLQRRMEQRR 1901
Query: 146 TQLPAA 151
QL A
Sbjct: 1902 AQLERA 1907
>gi|153792042 G protein-coupled receptor 178 [Homo sapiens]
Length = 612
Score = 27.7 bits (60), Expect = 5.0
Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Query: 119 PVHPVTVRERQALQAWAALGQSPKRPATQLPAAAQRHTPQLRIPRQ 164
P V+ R A +ALG SP RP T PA A P+ R RQ
Sbjct: 22 PTRAVSSSSRARGGALSALGPSPARPLTTSPAPAP--PPRSRPARQ 65
>gi|239755599 PREDICTED: hypothetical protein XP_002344618 [Homo
sapiens]
Length = 109
Score = 27.3 bits (59), Expect = 6.6
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 17 WWQCRTRSERSTGQYSANAPDTVASDAEAA 46
WW R+R+ RST +A+A AS A A
Sbjct: 48 WWPRRSRATRSTISVAASASPAAASRAPGA 77
>gi|239750090 PREDICTED: hypothetical protein XP_002347290 [Homo
sapiens]
Length = 109
Score = 27.3 bits (59), Expect = 6.6
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 17 WWQCRTRSERSTGQYSANAPDTVASDAEAA 46
WW R+R+ RST +A+A AS A A
Sbjct: 48 WWPRRSRATRSTISVAASASPAAASRAPGA 77
>gi|239744399 PREDICTED: hypothetical protein XP_002343154 [Homo
sapiens]
Length = 109
Score = 27.3 bits (59), Expect = 6.6
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 17 WWQCRTRSERSTGQYSANAPDTVASDAEAA 46
WW R+R+ RST +A+A AS A A
Sbjct: 48 WWPRRSRATRSTISVAASASPAAASRAPGA 77
>gi|18644886 forkhead box P1 isoform 1 [Homo sapiens]
Length = 677
Score = 27.3 bits (59), Expect = 6.6
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 107 GRAAISEAAQRQPVHPVTVRE---RQALQAWAALGQSPKR----PATQLPAAAQRHTPQL 159
G A ++ A Q+Q R+ +Q Q + +SPKR PA Q+P + TPQ+
Sbjct: 47 GAADLAHAQQQQQQALQVARQLLLQQQQQQQVSGLKSPKRNDKQPALQVPVSVAMMTPQV 106
Query: 160 RIPRQ 164
P+Q
Sbjct: 107 ITPQQ 111
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.128 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,435,990
Number of Sequences: 37866
Number of extensions: 260497
Number of successful extensions: 1000
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 976
Number of HSP's gapped (non-prelim): 45
length of query: 171
length of database: 18,247,518
effective HSP length: 95
effective length of query: 76
effective length of database: 14,650,248
effective search space: 1113418848
effective search space used: 1113418848
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.