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Search of human proteins with 118200356
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|118200356 growth hormone inducible transmembrane protein
[Homo sapiens]
(345 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|118200356 growth hormone inducible transmembrane protein [Hom... 684 0.0
gi|148746181 testis enhanced gene transcript (BAX inhibitor 1) i... 53 5e-07
gi|148746209 testis enhanced gene transcript (BAX inhibitor 1) i... 53 5e-07
gi|50593008 transmembrane BAX inhibitor motif containing 1 [Homo... 33 0.37
gi|57165375 glutamate receptor, ionotropic, N-methyl D-aspartate... 33 0.49
gi|57165373 glutamate receptor, ionotropic, N-methyl D-aspartate... 33 0.49
gi|116812579 transmembrane BAX inhibitor motif containing 4 [Hom... 32 0.64
gi|24431939 DnaJ (Hsp40) homolog, subfamily C, member 22 [Homo s... 31 1.9
gi|225543474 myotubularin related protein 7 [Homo sapiens] 30 3.2
gi|7661708 feline leukemia virus subgroup C cellular receptor 1 ... 30 3.2
gi|126352608 elastin isoform e precursor [Homo sapiens] 30 4.1
gi|126352446 elastin isoform d precursor [Homo sapiens] 30 4.1
gi|126352322 elastin isoform c precursor [Homo sapiens] 30 4.1
gi|126352700 elastin isoform b precursor [Homo sapiens] 30 4.1
gi|126352440 elastin isoform a precursor [Homo sapiens] 30 4.1
gi|208609982 xenotropic and polytropic retrovirus receptor isofo... 29 7.0
gi|19923272 xenotropic and polytropic retrovirus receptor isofor... 29 7.0
gi|32490561 solute carrier family 39 (zinc transporter), member ... 28 9.2
gi|187936925 1-aminocyclopropane-1-carboxylate synthase homolog ... 28 9.2
gi|14211921 1-aminocyclopropane-1-carboxylate synthase homolog [... 28 9.2
>gi|118200356 growth hormone inducible transmembrane protein [Homo
sapiens]
Length = 345
Score = 684 bits (1764), Expect = 0.0
Identities = 345/345 (100%), Positives = 345/345 (100%)
Query: 1 MLAARLVCLRTLPSRVFHPAFTKASPVVKNSITKNQWLLTPSREYATKTRIGIRRGRTGQ 60
MLAARLVCLRTLPSRVFHPAFTKASPVVKNSITKNQWLLTPSREYATKTRIGIRRGRTGQ
Sbjct: 1 MLAARLVCLRTLPSRVFHPAFTKASPVVKNSITKNQWLLTPSREYATKTRIGIRRGRTGQ 60
Query: 61 ELKEAALEPSMEKIFKIDQMGRWFVAGGAAVGLGALCYYGLGLSNEIGAIEKAVIWPQYV 120
ELKEAALEPSMEKIFKIDQMGRWFVAGGAAVGLGALCYYGLGLSNEIGAIEKAVIWPQYV
Sbjct: 61 ELKEAALEPSMEKIFKIDQMGRWFVAGGAAVGLGALCYYGLGLSNEIGAIEKAVIWPQYV 120
Query: 121 KDRIHSTYMYLAGSIGLTALSAIAISRTPVLMNFMMRGSWVTIGVTFAAMVGAGMLVRSI 180
KDRIHSTYMYLAGSIGLTALSAIAISRTPVLMNFMMRGSWVTIGVTFAAMVGAGMLVRSI
Sbjct: 121 KDRIHSTYMYLAGSIGLTALSAIAISRTPVLMNFMMRGSWVTIGVTFAAMVGAGMLVRSI 180
Query: 181 PYDQSPGPKHLAWLLHSGVMGAVVAPLTILGGPLLIRAAWYTAGIVGGLSTVAMCAPSEK 240
PYDQSPGPKHLAWLLHSGVMGAVVAPLTILGGPLLIRAAWYTAGIVGGLSTVAMCAPSEK
Sbjct: 181 PYDQSPGPKHLAWLLHSGVMGAVVAPLTILGGPLLIRAAWYTAGIVGGLSTVAMCAPSEK 240
Query: 241 FLNMGAPLGVGLGLVFVSSLGSMFLPPTTVAGATLYSVAMYGGLVLFSMFLLYDTQKVIK 300
FLNMGAPLGVGLGLVFVSSLGSMFLPPTTVAGATLYSVAMYGGLVLFSMFLLYDTQKVIK
Sbjct: 241 FLNMGAPLGVGLGLVFVSSLGSMFLPPTTVAGATLYSVAMYGGLVLFSMFLLYDTQKVIK 300
Query: 301 RAEVSPMYGVQKYDPINSMLSIYMDTLNIFMRVATMLATGGNRKK 345
RAEVSPMYGVQKYDPINSMLSIYMDTLNIFMRVATMLATGGNRKK
Sbjct: 301 RAEVSPMYGVQKYDPINSMLSIYMDTLNIFMRVATMLATGGNRKK 345
>gi|148746181 testis enhanced gene transcript (BAX inhibitor 1)
isoform 2 [Homo sapiens]
Length = 295
Score = 52.8 bits (125), Expect = 5e-07
Identities = 38/124 (30%), Positives = 64/124 (51%), Gaps = 11/124 (8%)
Query: 222 TAGIVGGLSTVAMCAPSEKFLNMGAPLGVGLGLVFVSSLGSMFLPPTTVAGATLYSVAMY 281
TA I + A+ A +L +G L L L+ +SSLG++F L+ +Y
Sbjct: 179 TAMIFTCFTLSALYARRRSYLFLGGILMSALSLLLLSSLGNVFF-----GSIWLFQANLY 233
Query: 282 GGLVLFSMFLLYDTQKVIKRAEVSPMYGVQKYDPINSMLSIYMDTLNIFMRVATMLATGG 341
GLV+ F+L+DTQ +I++AE +G Q Y I + +++D + +F ++ +LA
Sbjct: 234 VGLVVMCGFVLFDTQLIIEKAE----HGDQDY--IWHCIDLFLDFITVFRKLMMILAMNE 287
Query: 342 NRKK 345
KK
Sbjct: 288 KDKK 291
>gi|148746209 testis enhanced gene transcript (BAX inhibitor 1)
isoform 1 [Homo sapiens]
Length = 237
Score = 52.8 bits (125), Expect = 5e-07
Identities = 38/124 (30%), Positives = 64/124 (51%), Gaps = 11/124 (8%)
Query: 222 TAGIVGGLSTVAMCAPSEKFLNMGAPLGVGLGLVFVSSLGSMFLPPTTVAGATLYSVAMY 281
TA I + A+ A +L +G L L L+ +SSLG++F L+ +Y
Sbjct: 121 TAMIFTCFTLSALYARRRSYLFLGGILMSALSLLLLSSLGNVFF-----GSIWLFQANLY 175
Query: 282 GGLVLFSMFLLYDTQKVIKRAEVSPMYGVQKYDPINSMLSIYMDTLNIFMRVATMLATGG 341
GLV+ F+L+DTQ +I++AE +G Q Y I + +++D + +F ++ +LA
Sbjct: 176 VGLVVMCGFVLFDTQLIIEKAE----HGDQDY--IWHCIDLFLDFITVFRKLMMILAMNE 229
Query: 342 NRKK 345
KK
Sbjct: 230 KDKK 233
>gi|50593008 transmembrane BAX inhibitor motif containing 1 [Homo
sapiens]
Length = 311
Score = 33.1 bits (74), Expect = 0.37
Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 12/86 (13%)
Query: 260 LGSMFLPPTTVAGATLYSVAMYG--------GLVLFSMFLLYDTQKVIKRAEVSPMYGVQ 311
LG + L V LY +Y G + F++FL YDTQ V+ + + +
Sbjct: 226 LGIVLLVTGIVTSIVLYFQYVYWLHMLYAALGAICFTLFLAYDTQLVLGNRK----HTIS 281
Query: 312 KYDPINSMLSIYMDTLNIFMRVATML 337
D I L IY D + IF V ++
Sbjct: 282 PEDYITGALQIYTDIIYIFTFVLQLM 307
>gi|57165375 glutamate receptor, ionotropic, N-methyl
D-aspartate-associated protein 1 [Homo sapiens]
Length = 371
Score = 32.7 bits (73), Expect = 0.49
Identities = 16/55 (29%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Query: 283 GLVLFSMFLLYDTQKVIKRAEVSPMYGVQKYDPINSMLSIYMDTLNIFMRVATML 337
G +LF+ FL DTQ ++ ++S + + + + L++Y D +NIF+ + T++
Sbjct: 316 GALLFTCFLAVDTQLLLGNKQLS----LSPEEYVFAALNLYTDIINIFLYILTII 366
>gi|57165373 glutamate receptor, ionotropic, N-methyl
D-aspartate-associated protein 1 [Homo sapiens]
Length = 371
Score = 32.7 bits (73), Expect = 0.49
Identities = 16/55 (29%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Query: 283 GLVLFSMFLLYDTQKVIKRAEVSPMYGVQKYDPINSMLSIYMDTLNIFMRVATML 337
G +LF+ FL DTQ ++ ++S + + + + L++Y D +NIF+ + T++
Sbjct: 316 GALLFTCFLAVDTQLLLGNKQLS----LSPEEYVFAALNLYTDIINIFLYILTII 366
>gi|116812579 transmembrane BAX inhibitor motif containing 4 [Homo
sapiens]
Length = 238
Score = 32.3 bits (72), Expect = 0.64
Identities = 30/124 (24%), Positives = 58/124 (46%), Gaps = 14/124 (11%)
Query: 214 LLIRAAWYTAGIVGGLSTVAMCAPSEKFLNMGAPLGVGLGLVFVSSLGSMFLPPTTVAGA 273
++++A T + GL TV + F GA L L ++ +S F
Sbjct: 123 IILQAFILTTTVFFGL-TVYTLQSKKDFSKFGAGLFALLWILCLSGFLKFFF-----YSE 176
Query: 274 TLYSVAMYGGLVLFSMFLLYDTQKVIKRAEVSPMYGVQKYDPINSMLSIYMDTLNIFMRV 333
+ V G +LF F++YDT ++ + +SP ++Y + + +S+Y+D +N+F+ +
Sbjct: 177 IMELVLAAAGALLFCGFIIYDTHSLMHK--LSP----EEY--VLAAISLYLDIINLFLHL 228
Query: 334 ATML 337
L
Sbjct: 229 LRFL 232
>gi|24431939 DnaJ (Hsp40) homolog, subfamily C, member 22 [Homo
sapiens]
Length = 341
Score = 30.8 bits (68), Expect = 1.9
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 218 AAWYTAGIVGGLSTVAMCAPSEKFLNMGAPLGVGLGLVFVSSLGSMFLP-PTTVAGATLY 276
AA GI GL + + F + PL VGLG++ V+++G+ T+ A L
Sbjct: 82 AAQVIVGIYFGLVALISLSSMVNFYIVALPLAVGLGVLLVAAVGNQTSDFKNTLGSAFLT 141
Query: 277 SVAMYG 282
S YG
Sbjct: 142 SPIFYG 147
>gi|225543474 myotubularin related protein 7 [Homo sapiens]
Length = 660
Score = 30.0 bits (66), Expect = 3.2
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 183 DQSPGPKHLAWLLHSGVMGAVVAPLTILGGPLLIR 217
+ SP P+ W+LHS + T G PLLIR
Sbjct: 39 ENSPDPRKETWILHSQISTIEKQATTATGCPLLIR 73
>gi|7661708 feline leukemia virus subgroup C cellular receptor 1
[Homo sapiens]
Length = 555
Score = 30.0 bits (66), Expect = 3.2
Identities = 35/142 (24%), Positives = 56/142 (39%), Gaps = 22/142 (15%)
Query: 133 GSIGLTALSAIAISRTPVL--MNFMMRGSWV--TIGVTFAAMVGAGMLVRSIPYDQSPGP 188
G G+T L +S +L + + +W+ T G+ A++G+G+
Sbjct: 137 GFYGVTLLHIDWLSMVYMLAYVPLIFPATWLLDTRGLRLTALLGSGLNCLGAWIKCGSVQ 196
Query: 189 KHLAWLLHSGVMGAVVAPLTILGGPLLIRAAWYTAGIVGGLSTVAMCAPSEKFLNMGAPL 248
+HL W+ G VA + ILG P I + W+ G CA + +G L
Sbjct: 197 QHLFWVTMLGQCLCSVAQVFILGLPSRIASVWF-----GPKEVSTACATAV----LGNQL 247
Query: 249 GVGLGLVFVSSLGSMFLPPTTV 270
G +G + LPP V
Sbjct: 248 GTAVGFL---------LPPVLV 260
>gi|126352608 elastin isoform e precursor [Homo sapiens]
Length = 705
Score = 29.6 bits (65), Expect = 4.1
Identities = 60/222 (27%), Positives = 85/222 (38%), Gaps = 35/222 (15%)
Query: 85 VAGGAAVGLGALCYYGLGLSNEIGAIEKAVIWPQYVKDRIHSTYMYLAGSIGLTALSAIA 144
VA G V G G+GL+ +G + P + +A IG ++A A
Sbjct: 460 VAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPG----------VGVAPGIGPGGVAAAA 509
Query: 145 ISRTPVLMNFMMR----------GSWVTIGVTFAAMVGAGM----LVRSIP-YDQSPGPK 189
S V +R G V +GV VGAG+ + +P + PG
Sbjct: 510 KSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLG-VGAGVPGLGVGAGVPGFGAVPGAL 568
Query: 190 HLAWLLHSGV-MGAVVAPLTILGGPLLIRAAWYTAGIVGGLSTVAMCAPSEKFLNMGAP- 247
A G + V+ L LGG + I AG + A + +F +GA
Sbjct: 569 AAAKAAKYGAAVPGVLGGLGALGG-VGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAG 627
Query: 248 ---LGVG-LGLVFVSSLGSMFLPPTTVAGATLYSVAMYGGLV 285
LGVG LG+ V LG +PP A A Y A GG++
Sbjct: 628 LGGLGVGGLGVPGVGGLGG--IPPAAAAKAAKYGAAGLGGVL 667
>gi|126352446 elastin isoform d precursor [Homo sapiens]
Length = 711
Score = 29.6 bits (65), Expect = 4.1
Identities = 62/227 (27%), Positives = 86/227 (37%), Gaps = 35/227 (15%)
Query: 85 VAGGAAVGLGALCYYGLGLSNEIGAIEKAVIWPQYVKDRIHSTYMYLAGSIGLTALSAIA 144
VA G V G G+GL+ +G + P + +A IG ++A A
Sbjct: 484 VAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPG----------VGVAPGIGPGGVAAAA 533
Query: 145 ISRTPVLMNFMMR----------GSWVTIGVTFAAMVGAGM----LVRSIP-YDQSPGPK 189
S V +R G V +GV VGAG+ + +P + PG
Sbjct: 534 KSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLG-VGAGVPGLGVGAGVPGFGAVPGAL 592
Query: 190 HLAWLLHSGV-MGAVVAPLTILGGPLLIRAAWYTAGIVGGLSTVAMCAPSEKFLNMGAP- 247
A G + V+ L LGG + I AG + A + +F +GA
Sbjct: 593 AAAKAAKYGAAVPGVLGGLGALGG-VGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAG 651
Query: 248 ---LGVG-LGLVFVSSLGSMFLPPTTVAGATLYSVAMYGGLVLFSMF 290
LGVG LG+ V LG +PP A A Y VA G L +F
Sbjct: 652 LGGLGVGGLGVPGVGGLGG--IPPAAAAKAAKYGVAARPGFGLSPIF 696
>gi|126352322 elastin isoform c precursor [Homo sapiens]
Length = 692
Score = 29.6 bits (65), Expect = 4.1
Identities = 62/227 (27%), Positives = 86/227 (37%), Gaps = 35/227 (15%)
Query: 85 VAGGAAVGLGALCYYGLGLSNEIGAIEKAVIWPQYVKDRIHSTYMYLAGSIGLTALSAIA 144
VA G V G G+GL+ +G + P + +A IG ++A A
Sbjct: 465 VAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPG----------VGVAPGIGPGGVAAAA 514
Query: 145 ISRTPVLMNFMMR----------GSWVTIGVTFAAMVGAGM----LVRSIP-YDQSPGPK 189
S V +R G V +GV VGAG+ + +P + PG
Sbjct: 515 KSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLG-VGAGVPGLGVGAGVPGFGAVPGAL 573
Query: 190 HLAWLLHSGV-MGAVVAPLTILGGPLLIRAAWYTAGIVGGLSTVAMCAPSEKFLNMGAP- 247
A G + V+ L LGG + I AG + A + +F +GA
Sbjct: 574 AAAKAAKYGAAVPGVLGGLGALGG-VGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAG 632
Query: 248 ---LGVG-LGLVFVSSLGSMFLPPTTVAGATLYSVAMYGGLVLFSMF 290
LGVG LG+ V LG +PP A A Y VA G L +F
Sbjct: 633 LGGLGVGGLGVPGVGGLGG--IPPAAAAKAAKYGVAARPGFGLSPIF 677
>gi|126352700 elastin isoform b precursor [Homo sapiens]
Length = 677
Score = 29.6 bits (65), Expect = 4.1
Identities = 62/227 (27%), Positives = 86/227 (37%), Gaps = 35/227 (15%)
Query: 85 VAGGAAVGLGALCYYGLGLSNEIGAIEKAVIWPQYVKDRIHSTYMYLAGSIGLTALSAIA 144
VA G V G G+GL+ +G + P + +A IG ++A A
Sbjct: 450 VAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPG----------VGVAPGIGPGGVAAAA 499
Query: 145 ISRTPVLMNFMMR----------GSWVTIGVTFAAMVGAGM----LVRSIP-YDQSPGPK 189
S V +R G V +GV VGAG+ + +P + PG
Sbjct: 500 KSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLG-VGAGVPGLGVGAGVPGFGAVPGAL 558
Query: 190 HLAWLLHSGV-MGAVVAPLTILGGPLLIRAAWYTAGIVGGLSTVAMCAPSEKFLNMGAP- 247
A G + V+ L LGG + I AG + A + +F +GA
Sbjct: 559 AAAKAAKYGAAVPGVLGGLGALGG-VGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAG 617
Query: 248 ---LGVG-LGLVFVSSLGSMFLPPTTVAGATLYSVAMYGGLVLFSMF 290
LGVG LG+ V LG +PP A A Y VA G L +F
Sbjct: 618 LGGLGVGGLGVPGVGGLGG--IPPAAAAKAAKYGVAARPGFGLSPIF 662
>gi|126352440 elastin isoform a precursor [Homo sapiens]
Length = 724
Score = 29.6 bits (65), Expect = 4.1
Identities = 60/222 (27%), Positives = 85/222 (38%), Gaps = 35/222 (15%)
Query: 85 VAGGAAVGLGALCYYGLGLSNEIGAIEKAVIWPQYVKDRIHSTYMYLAGSIGLTALSAIA 144
VA G V G G+GL+ +G + P + +A IG ++A A
Sbjct: 479 VAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPG----------VGVAPGIGPGGVAAAA 528
Query: 145 ISRTPVLMNFMMR----------GSWVTIGVTFAAMVGAGM----LVRSIP-YDQSPGPK 189
S V +R G V +GV VGAG+ + +P + PG
Sbjct: 529 KSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLG-VGAGVPGLGVGAGVPGFGAVPGAL 587
Query: 190 HLAWLLHSGV-MGAVVAPLTILGGPLLIRAAWYTAGIVGGLSTVAMCAPSEKFLNMGAP- 247
A G + V+ L LGG + I AG + A + +F +GA
Sbjct: 588 AAAKAAKYGAAVPGVLGGLGALGG-VGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAG 646
Query: 248 ---LGVG-LGLVFVSSLGSMFLPPTTVAGATLYSVAMYGGLV 285
LGVG LG+ V LG +PP A A Y A GG++
Sbjct: 647 LGGLGVGGLGVPGVGGLGG--IPPAAAAKAAKYGAAGLGGVL 686
>gi|208609982 xenotropic and polytropic retrovirus receptor isoform
2 [Homo sapiens]
Length = 631
Score = 28.9 bits (63), Expect = 7.0
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 13/87 (14%)
Query: 252 LGLVFVSSLGSMFLPPTTVAGATLYSVAMYGGLVLF----SMFLLYDTQ----KVIKRAE 303
LG+++ SL + F P +V +Y +A+YG +V F + Y ++ K++ R
Sbjct: 323 LGILWCLSLLACFFAPISVIPTYVYPLALYGFMVFFLINPTKTFYYKSRFWLLKLLFRVF 382
Query: 304 VSPMYGV-----QKYDPINSMLSIYMD 325
+P + V D +NS+ I MD
Sbjct: 383 TAPFHKVGFADFWLADQLNSLSVILMD 409
>gi|19923272 xenotropic and polytropic retrovirus receptor isoform 1
[Homo sapiens]
Length = 696
Score = 28.9 bits (63), Expect = 7.0
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 13/87 (14%)
Query: 252 LGLVFVSSLGSMFLPPTTVAGATLYSVAMYGGLVLF----SMFLLYDTQ----KVIKRAE 303
LG+++ SL + F P +V +Y +A+YG +V F + Y ++ K++ R
Sbjct: 323 LGILWCLSLLACFFAPISVIPTYVYPLALYGFMVFFLINPTKTFYYKSRFWLLKLLFRVF 382
Query: 304 VSPMYGV-----QKYDPINSMLSIYMD 325
+P + V D +NS+ I MD
Sbjct: 383 TAPFHKVGFADFWLADQLNSLSVILMD 409
>gi|32490561 solute carrier family 39 (zinc transporter), member 3
isoform a [Homo sapiens]
Length = 314
Score = 28.5 bits (62), Expect = 9.2
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 6/45 (13%)
Query: 247 PLGVGLGLVFVSSLGSMFLPPTTVAGATLYSVAMYGGLVLFSMFL 291
PLG+GLGL S+ G P +VA L +A GG LF FL
Sbjct: 241 PLGIGLGLGIESAQG----VPGSVASVLLQGLA--GGTFLFITFL 279
>gi|187936925 1-aminocyclopropane-1-carboxylate synthase homolog
[Homo sapiens]
Length = 501
Score = 28.5 bits (62), Expect = 9.2
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Query: 242 LNMGAPLGVGLGLVFVSSLGSMFLPPTTVAGATLYSVAMYGGLVLFSMFL 291
LN GA L L V + G FL PT GA V +YG + L ++L
Sbjct: 167 LNGGASLFSALATVLCEA-GEAFLIPTPYYGAITQHVCLYGNIRLAYVYL 215
>gi|14211921 1-aminocyclopropane-1-carboxylate synthase homolog
[Homo sapiens]
Length = 501
Score = 28.5 bits (62), Expect = 9.2
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Query: 242 LNMGAPLGVGLGLVFVSSLGSMFLPPTTVAGATLYSVAMYGGLVLFSMFL 291
LN GA L L V + G FL PT GA V +YG + L ++L
Sbjct: 167 LNGGASLFSALATVLCEA-GEAFLIPTPYYGAITQHVCLYGNIRLAYVYL 215
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.137 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,216,892
Number of Sequences: 37866
Number of extensions: 524676
Number of successful extensions: 1057
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 1045
Number of HSP's gapped (non-prelim): 20
length of query: 345
length of database: 18,247,518
effective HSP length: 103
effective length of query: 242
effective length of database: 14,347,320
effective search space: 3472051440
effective search space used: 3472051440
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.