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Search of human proteins with 239751058
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239751058 PREDICTED: hypothetical protein XP_002347690 [Homo
sapiens]
(462 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239751058 PREDICTED: hypothetical protein XP_002347690 [Homo ... 944 0.0
gi|34452173 integrin alpha X precursor [Homo sapiens] 802 0.0
gi|62548866 integrin, alpha D precursor [Homo sapiens] 471 e-133
gi|224831239 integrin alpha M isoform 1 precursor [Homo sapiens] 406 e-113
gi|88501734 integrin alpha M isoform 2 precursor [Homo sapiens] 406 e-113
gi|167466217 integrin alpha L isoform b precursor [Homo sapiens] 110 3e-24
gi|167466215 integrin alpha L isoform a precursor [Homo sapiens] 110 3e-24
gi|148728188 integrin, alpha E precursor [Homo sapiens] 78 1e-14
gi|116295258 integrin alpha 2 precursor [Homo sapiens] 68 2e-11
gi|88758615 integrin alpha 2b preproprotein [Homo sapiens] 60 4e-09
gi|52485853 integrin, alpha 11 precursor [Homo sapiens] 59 1e-08
gi|31657142 integrin, alpha 1 precursor [Homo sapiens] 58 2e-08
gi|52485941 integrin, alpha 9 precursor [Homo sapiens] 56 6e-08
gi|56237029 integrin alpha 5 precursor [Homo sapiens] 52 1e-06
gi|223468597 integrin alpha-V isoform 3 precursor [Homo sapiens] 50 3e-06
gi|223468595 integrin alpha-V isoform 2 [Homo sapiens] 50 3e-06
gi|4504763 integrin alpha-V isoform 1 precursor [Homo sapiens] 50 3e-06
gi|67191027 integrin alpha 4 precursor [Homo sapiens] 49 1e-05
gi|222418615 integrin alpha 7 isoform 3 [Homo sapiens] 47 5e-05
gi|222418613 integrin alpha 7 isoform 1 precursor [Homo sapiens] 47 5e-05
gi|222418611 integrin alpha 7 isoform 2 precursor [Homo sapiens] 47 5e-05
gi|38569398 integrin, alpha 10 precursor [Homo sapiens] 47 5e-05
gi|49170034 integrin, alpha 8 [Homo sapiens] 42 0.001
gi|119395740 integrin alpha chain, alpha 6 isoform a precursor [... 39 0.008
gi|119395742 integrin alpha chain, alpha 6 isoform b precursor [... 39 0.013
gi|4504747 integrin alpha 3 isoform a precursor [Homo sapiens] 35 0.19
gi|38016947 complement component 5 preproprotein [Homo sapiens] 33 0.71
gi|110227857 thiamin pyrophosphokinase 1 isoform b [Homo sapiens] 30 4.6
gi|110815802 hypothetical protein LOC84267 [Homo sapiens] 29 7.9
>gi|239751058 PREDICTED: hypothetical protein XP_002347690 [Homo
sapiens]
Length = 462
Score = 944 bits (2440), Expect = 0.0
Identities = 462/462 (100%), Positives = 462/462 (100%)
Query: 1 MLAADAQRYFTASLPFEKNCGADHICQDNLGISFSFPGLKSLLVGSNLELNAEVMVWNDG 60
MLAADAQRYFTASLPFEKNCGADHICQDNLGISFSFPGLKSLLVGSNLELNAEVMVWNDG
Sbjct: 1 MLAADAQRYFTASLPFEKNCGADHICQDNLGISFSFPGLKSLLVGSNLELNAEVMVWNDG 60
Query: 61 EDSYGTTITFSHPAGLSYRYVAEGQKQGQLRSLHLTCDSAPVGSQGTWSTSCRINHLIFR 120
EDSYGTTITFSHPAGLSYRYVAEGQKQGQLRSLHLTCDSAPVGSQGTWSTSCRINHLIFR
Sbjct: 61 EDSYGTTITFSHPAGLSYRYVAEGQKQGQLRSLHLTCDSAPVGSQGTWSTSCRINHLIFR 120
Query: 121 GGAQITFLATFDVSPKAVLGDRLLLTANVSSENNTPRTSKTTFQLELPVKYAVYTVVSSH 180
GGAQITFLATFDVSPKAVLGDRLLLTANVSSENNTPRTSKTTFQLELPVKYAVYTVVSSH
Sbjct: 121 GGAQITFLATFDVSPKAVLGDRLLLTANVSSENNTPRTSKTTFQLELPVKYAVYTVVSSH 180
Query: 181 EQFTKYLNFSESEEKESHVAMHRYQAGGGDAGDWAGVNNLGQRDLPVSINFWVPVELNQE 240
EQFTKYLNFSESEEKESHVAMHRYQAGGGDAGDWAGVNNLGQRDLPVSINFWVPVELNQE
Sbjct: 181 EQFTKYLNFSESEEKESHVAMHRYQAGGGDAGDWAGVNNLGQRDLPVSINFWVPVELNQE 240
Query: 241 AVWMDVEVSHPQVPKDCMWLLHECPFYLDSLCPMWVPDVPAETLVLCIFPQNPSLRCSSE 300
AVWMDVEVSHPQVPKDCMWLLHECPFYLDSLCPMWVPDVPAETLVLCIFPQNPSLRCSSE
Sbjct: 241 AVWMDVEVSHPQVPKDCMWLLHECPFYLDSLCPMWVPDVPAETLVLCIFPQNPSLRCSSE 300
Query: 301 KIAPPASDFLAHIQKNPVLDCSIAGCLRFRCDVPSFSVQEELDFTLKGNLSFGWVRQILQ 360
KIAPPASDFLAHIQKNPVLDCSIAGCLRFRCDVPSFSVQEELDFTLKGNLSFGWVRQILQ
Sbjct: 301 KIAPPASDFLAHIQKNPVLDCSIAGCLRFRCDVPSFSVQEELDFTLKGNLSFGWVRQILQ 360
Query: 361 KKVSVVSVAEITFDTSVYSQLPGQEAFMRAQTTTVLEKYKVHNPTPLIVGSSIGGLLLLA 420
KKVSVVSVAEITFDTSVYSQLPGQEAFMRAQTTTVLEKYKVHNPTPLIVGSSIGGLLLLA
Sbjct: 361 KKVSVVSVAEITFDTSVYSQLPGQEAFMRAQTTTVLEKYKVHNPTPLIVGSSIGGLLLLA 420
Query: 421 LITAVLYKVGFFKRQYKEMMEEANGQIAPENGTQTPSPPSEK 462
LITAVLYKVGFFKRQYKEMMEEANGQIAPENGTQTPSPPSEK
Sbjct: 421 LITAVLYKVGFFKRQYKEMMEEANGQIAPENGTQTPSPPSEK 462
>gi|34452173 integrin alpha X precursor [Homo sapiens]
Length = 1163
Score = 802 bits (2071), Expect = 0.0
Identities = 412/462 (89%), Positives = 412/462 (89%), Gaps = 50/462 (10%)
Query: 1 MLAADAQRYFTASLPFEKNCGADHICQDNLGISFSFPGLKSLLVGSNLELNAEVMVWNDG 60
MLAADAQRYFTASLPFEKNCGADHICQDNLGISFSFPGLKSLLVGSNLELNAEVMVWNDG
Sbjct: 752 MLAADAQRYFTASLPFEKNCGADHICQDNLGISFSFPGLKSLLVGSNLELNAEVMVWNDG 811
Query: 61 EDSYGTTITFSHPAGLSYRYVAEGQKQGQLRSLHLTCDSAPVGSQGTWSTSCRINHLIFR 120
EDSYGTTITFSHPAGLSYRYVAEGQKQGQLRSLHLTCDSAPVGSQGTWSTSCRINHLIFR
Sbjct: 812 EDSYGTTITFSHPAGLSYRYVAEGQKQGQLRSLHLTCDSAPVGSQGTWSTSCRINHLIFR 871
Query: 121 GGAQITFLATFDVSPKAVLGDRLLLTANVSSENNTPRTSKTTFQLELPVKYAVYTVVSSH 180
GGAQITFLATFDVSPKAVLGDRLLLTANVSSENNTPRTSKTTFQLELPVKYAVYTVVSSH
Sbjct: 872 GGAQITFLATFDVSPKAVLGDRLLLTANVSSENNTPRTSKTTFQLELPVKYAVYTVVSSH 931
Query: 181 EQFTKYLNFSESEEKESHVAMHRYQAGGGDAGDWAGVNNLGQRDLPVSINFWVPVELNQE 240
EQFTKYLNFSESEEKESHVAMHRYQ VNNLGQRDLPVSINFWVPVELNQE
Sbjct: 932 EQFTKYLNFSESEEKESHVAMHRYQ-----------VNNLGQRDLPVSINFWVPVELNQE 980
Query: 241 AVWMDVEVSHPQVPKDCMWLLHECPFYLDSLCPMWVPDVPAETLVLCIFPQNPSLRCSSE 300
AVWMDVEVSHPQ NPSLRCSSE
Sbjct: 981 AVWMDVEVSHPQ---------------------------------------NPSLRCSSE 1001
Query: 301 KIAPPASDFLAHIQKNPVLDCSIAGCLRFRCDVPSFSVQEELDFTLKGNLSFGWVRQILQ 360
KIAPPASDFLAHIQKNPVLDCSIAGCLRFRCDVPSFSVQEELDFTLKGNLSFGWVRQILQ
Sbjct: 1002 KIAPPASDFLAHIQKNPVLDCSIAGCLRFRCDVPSFSVQEELDFTLKGNLSFGWVRQILQ 1061
Query: 361 KKVSVVSVAEITFDTSVYSQLPGQEAFMRAQTTTVLEKYKVHNPTPLIVGSSIGGLLLLA 420
KKVSVVSVAEITFDTSVYSQLPGQEAFMRAQTTTVLEKYKVHNPTPLIVGSSIGGLLLLA
Sbjct: 1062 KKVSVVSVAEITFDTSVYSQLPGQEAFMRAQTTTVLEKYKVHNPTPLIVGSSIGGLLLLA 1121
Query: 421 LITAVLYKVGFFKRQYKEMMEEANGQIAPENGTQTPSPPSEK 462
LITAVLYKVGFFKRQYKEMMEEANGQIAPENGTQTPSPPSEK
Sbjct: 1122 LITAVLYKVGFFKRQYKEMMEEANGQIAPENGTQTPSPPSEK 1163
>gi|62548866 integrin, alpha D precursor [Homo sapiens]
Length = 1161
Score = 471 bits (1213), Expect = e-133
Identities = 253/452 (55%), Positives = 306/452 (67%), Gaps = 52/452 (11%)
Query: 1 MLAADAQRYFTASLPFEKNCGADHICQDNLGISFSFPGLKSLLVGSNLELNAEVMVWNDG 60
+LA +Q FTASLPFEKNCG D +C+ +LG++ SF GL++L VGS+LELN V VWN G
Sbjct: 749 VLAVGSQDLFTASLPFEKNCGQDGLCEGDLGVTLSFSGLQTLTVGSSLELNVIVTVWNAG 808
Query: 61 EDSYGTTITFSHPAGLSYRYVAEGQKQGQLRSLHLTCDSAPVGSQGTWSTSCRINHLIFR 120
EDSYGT ++ +PAGLS+R V+ QKQ +L L C++ P +G S+ C +NH IF
Sbjct: 809 EDSYGTVVSLYYPAGLSHRRVSGAQKQPHQSALRLACETVPTEDEGLRSSRCSVNHPIFH 868
Query: 121 GGAQITFLATFDVSPKAVLGDRLLLTANVSSENNTPRTSKTTFQLELPVKYAVYTVVSSH 180
G+ TF+ TFDVS KA LGDR+L+ A+ SSENN +SK TFQLELPVKYAVYT++S
Sbjct: 869 EGSNGTFIVTFDVSYKATLGDRMLMRASASSENNKASSSKATFQLELPVKYAVYTMISRQ 928
Query: 181 EQFTKYLNFSESEEKESHVAMHRYQAGGGDAGDWAGVNNLGQRDLPVSINFWVPVELNQE 240
E+ TKY NF+ S+EK+ A HRY+ VNNL QRDL +SINFWVPV LN
Sbjct: 929 EESTKYFNFATSDEKKMKEAEHRYR-----------VNNLSQRDLAISINFWVPVLLNGV 977
Query: 241 AVWMDVEVSHPQVPKDCMWLLHECPFYLDSLCPMWVPDVPAETLVLCIFPQNPSLRCSSE 300
AVW DV + P + SL C SE
Sbjct: 978 AVW-DVVMEAP----------------------------------------SQSLPCVSE 996
Query: 301 KIAPPASDFLAHIQKNPVLDCSIAGCLRFRCDVPSFSVQEELDFTLKGNLSFGWVRQILQ 360
+ P SDFL I ++P+LDCSIA CL+FRCDVPSFSVQEELDFTLKGNLSFGWVR+ LQ
Sbjct: 997 RKPPQHSDFLTQISRSPMLDCSIADCLQFRCDVPSFSVQEELDFTLKGNLSFGWVRETLQ 1056
Query: 361 KKVSVVSVAEITFDTSVYSQLPGQEAFMRAQTTTVLEKYKVHNPTPLIVGSSIGGLLLLA 420
KKV VVSVAEITFDTSVYSQLPGQEAFMRAQ VLE+ +V+N P+I+GSS+G LLLLA
Sbjct: 1057 KKVLVVSVAEITFDTSVYSQLPGQEAFMRAQMEMVLEEDEVYNAIPIIMGSSVGALLLLA 1116
Query: 421 LITAVLYKVGFFKRQYKEMMEEANGQIAPENG 452
LITA LYK+GFFKR YKEM+E+ A +G
Sbjct: 1117 LITATLYKLGFFKRHYKEMLEDKPEDTATFSG 1148
>gi|224831239 integrin alpha M isoform 1 precursor [Homo sapiens]
Length = 1153
Score = 406 bits (1043), Expect = e-113
Identities = 231/444 (52%), Positives = 279/444 (62%), Gaps = 53/444 (11%)
Query: 1 MLAADAQRYFTASLPFEKNCGADHICQDNLGISFSFPGLKSLLVGSNLELNAEVMVWNDG 60
+LA DAQR FTA PFEKNCG D+ICQD+L I+FSF L L+VG E N V V NDG
Sbjct: 752 VLAEDAQRLFTALFPFEKNCGNDNICQDDLSITFSFMSLDCLVVGGPREFNVTVTVRNDG 811
Query: 61 EDSYGTTITFSHPAGLSYRYVAEGQKQGQLRSLHLTCDSAPVG--SQGTWSTSCRINHLI 118
EDSY T +TF P LSYR V+ Q Q RS L C+SA S STSC INH I
Sbjct: 812 EDSYRTQVTFFFPLDLSYRKVSTLQNQRSQRSWRLACESASSTEVSGALKSTSCSINHPI 871
Query: 119 FRGGAQITFLATFDVSPKAVLGDRLLLTANVSSENNTPRTSKTTFQLELPVKYAVYTVVS 178
F +++TF TFDV KA LG++LLL ANV+SENN PRT+KT FQLELPVKYAVY VV+
Sbjct: 872 FPENSEVTFNITFDVDSKASLGNKLLLKANVTSENNMPRTNKTEFQLELPVKYAVYMVVT 931
Query: 179 SHEQFTKYLNFSESEEKESHVAMHRYQAGGGDAGDWAGVNNLGQRDLPVSINFWVPVELN 238
SH TKYLNF+ S E S V H+YQ V+NLGQR LP+S+ F VPV LN
Sbjct: 932 SHGVSTKYLNFTAS-ENTSRVMQHQYQ-----------VSNLGQRSLPISLVFLVPVRLN 979
Query: 239 QEAVWMDVEVSHPQVPKDCMWLLHECPFYLDSLCPMWVPDVPAETLVLCIFPQNPSLRCS 298
Q +W PQV F +N S C
Sbjct: 980 QTVIW-----DRPQV----------------------------------TFSENLSSTCH 1000
Query: 299 SEKIAPPASDFLAHIQKNPVLDCSIAGCLRFRCDVPSFSVQEELDFTLKGNLSFGWVRQI 358
+++ P SDFLA ++K PV++CSIA C R +CD+P F +QEE + TLKGNLSF W +
Sbjct: 1001 TKERLPSHSDFLAELRKAPVVNCSIAVCQRIQCDIPFFGIQEEFNATLKGNLSFDWYIKT 1060
Query: 359 LQKKVSVVSVAEITFDTSVYSQLPGQEAFMRAQTTTVLEKYKVHNPTPLIVGSSIGGLLL 418
+ +VS AEI F+ SV++ LPGQ AF+R+QT T +E ++V NP PLIVGSS+GGLLL
Sbjct: 1061 SHNHLLIVSTAEILFNDSVFTLLPGQGAFVRSQTETKVEPFEVPNPLPLIVGSSVGGLLL 1120
Query: 419 LALITAVLYKVGFFKRQYKEMMEE 442
LALITA LYK+GFFKRQYK+MM E
Sbjct: 1121 LALITAALYKLGFFKRQYKDMMSE 1144
>gi|88501734 integrin alpha M isoform 2 precursor [Homo sapiens]
Length = 1152
Score = 406 bits (1043), Expect = e-113
Identities = 231/444 (52%), Positives = 279/444 (62%), Gaps = 53/444 (11%)
Query: 1 MLAADAQRYFTASLPFEKNCGADHICQDNLGISFSFPGLKSLLVGSNLELNAEVMVWNDG 60
+LA DAQR FTA PFEKNCG D+ICQD+L I+FSF L L+VG E N V V NDG
Sbjct: 751 VLAEDAQRLFTALFPFEKNCGNDNICQDDLSITFSFMSLDCLVVGGPREFNVTVTVRNDG 810
Query: 61 EDSYGTTITFSHPAGLSYRYVAEGQKQGQLRSLHLTCDSAPVG--SQGTWSTSCRINHLI 118
EDSY T +TF P LSYR V+ Q Q RS L C+SA S STSC INH I
Sbjct: 811 EDSYRTQVTFFFPLDLSYRKVSTLQNQRSQRSWRLACESASSTEVSGALKSTSCSINHPI 870
Query: 119 FRGGAQITFLATFDVSPKAVLGDRLLLTANVSSENNTPRTSKTTFQLELPVKYAVYTVVS 178
F +++TF TFDV KA LG++LLL ANV+SENN PRT+KT FQLELPVKYAVY VV+
Sbjct: 871 FPENSEVTFNITFDVDSKASLGNKLLLKANVTSENNMPRTNKTEFQLELPVKYAVYMVVT 930
Query: 179 SHEQFTKYLNFSESEEKESHVAMHRYQAGGGDAGDWAGVNNLGQRDLPVSINFWVPVELN 238
SH TKYLNF+ S E S V H+YQ V+NLGQR LP+S+ F VPV LN
Sbjct: 931 SHGVSTKYLNFTAS-ENTSRVMQHQYQ-----------VSNLGQRSLPISLVFLVPVRLN 978
Query: 239 QEAVWMDVEVSHPQVPKDCMWLLHECPFYLDSLCPMWVPDVPAETLVLCIFPQNPSLRCS 298
Q +W PQV F +N S C
Sbjct: 979 QTVIW-----DRPQV----------------------------------TFSENLSSTCH 999
Query: 299 SEKIAPPASDFLAHIQKNPVLDCSIAGCLRFRCDVPSFSVQEELDFTLKGNLSFGWVRQI 358
+++ P SDFLA ++K PV++CSIA C R +CD+P F +QEE + TLKGNLSF W +
Sbjct: 1000 TKERLPSHSDFLAELRKAPVVNCSIAVCQRIQCDIPFFGIQEEFNATLKGNLSFDWYIKT 1059
Query: 359 LQKKVSVVSVAEITFDTSVYSQLPGQEAFMRAQTTTVLEKYKVHNPTPLIVGSSIGGLLL 418
+ +VS AEI F+ SV++ LPGQ AF+R+QT T +E ++V NP PLIVGSS+GGLLL
Sbjct: 1060 SHNHLLIVSTAEILFNDSVFTLLPGQGAFVRSQTETKVEPFEVPNPLPLIVGSSVGGLLL 1119
Query: 419 LALITAVLYKVGFFKRQYKEMMEE 442
LALITA LYK+GFFKRQYK+MM E
Sbjct: 1120 LALITAALYKLGFFKRQYKDMMSE 1143
>gi|167466217 integrin alpha L isoform b precursor [Homo sapiens]
Length = 1086
Score = 110 bits (275), Expect = 3e-24
Identities = 121/441 (27%), Positives = 180/441 (40%), Gaps = 78/441 (17%)
Query: 11 TASLPFEKNCGADHICQDNLGISFSFPGLKSLLVGSNLELNAEVMVWNDGEDSYGTTITF 70
T +PFEKNCG D C+ NL +SFS ++L + + L+ E+ + N ED+Y +
Sbjct: 678 TWEIPFEKNCGEDKKCEANLRVSFSPARSRALRLTAFASLSVELSLSNLEEDAYWVQLDL 737
Query: 71 SHPAGLSYRYVAEGQKQGQLRSLHLTCDSAPVGSQ-GTWSTSCRINHLIFRGGAQITFLA 129
P GLS+R V + Q + ++C+ P S+ + + SC ++ IF+ G +
Sbjct: 738 HFPPGLSFRKVEMLKPHSQ---IPVSCEELPEESRLLSRALSCNVSSPIFKAGHSVALQM 794
Query: 130 TFDVSPKAVLGDRLLLTANVSSENN----TPRTSKTTFQLELPVKYAVYTVVSSHEQFTK 185
F+ + GD + L ANV+ N S TT +P+ Y + ++ E T
Sbjct: 795 MFNTLVNSSWGDSVELHANVTCNNEDSDLLEDNSATTI---IPILYPINILIQDQEDSTL 851
Query: 186 YLNFSESEEKESHVAMHRYQAGGGDAGDWAGVNNLGQRDLPVSINFWVPVELNQEAVWMD 245
Y++F+ K H H YQ R P + +P ++
Sbjct: 852 YVSFTPKGPK-IHQVKHMYQV----------------RIQPSIHDHNIPT--------LE 886
Query: 246 VEVSHPQVPKDCMWLLHECPFYLDSLCPMWVPDVPAETLVLCIFPQNPSLRCSSEKIAPP 305
V PQ P + + W V E V C + L ++E P
Sbjct: 887 AVVGVPQPPSE------------GPITHQW--SVQMEPPVPCHYEDLERLPDAAEPCLPG 932
Query: 306 ASDFLAHIQKNPVLDCSIAGCLRFRCDVPSFSVQEELDFTLKGNLSFGWVRQI-LQKKVS 364
A FRC V ++E+ + G L V +I S
Sbjct: 933 A---------------------LFRCPV---VFRQEILVQVIGTLEL--VGEIEASSMFS 966
Query: 365 VVSVAEITFDTSVYSQLPGQEAFMRAQTTTVLEKYKVHNPTPLIVGSSIGGLLLLALITA 424
+ S I+F++S + L G A + AQ ++ L V S IGGLLLL LI
Sbjct: 967 LCSSLSISFNSSKHFHLYGSNASL-AQVVMKVDVVYEKQMLYLYVLSGIGGLLLLLLIFI 1025
Query: 425 VLYKVGFFKRQYKEMMEEANG 445
VLYKVGFFKR KE ME G
Sbjct: 1026 VLYKVGFFKRNLKEKMEAGRG 1046
>gi|167466215 integrin alpha L isoform a precursor [Homo sapiens]
Length = 1170
Score = 110 bits (275), Expect = 3e-24
Identities = 121/441 (27%), Positives = 180/441 (40%), Gaps = 78/441 (17%)
Query: 11 TASLPFEKNCGADHICQDNLGISFSFPGLKSLLVGSNLELNAEVMVWNDGEDSYGTTITF 70
T +PFEKNCG D C+ NL +SFS ++L + + L+ E+ + N ED+Y +
Sbjct: 762 TWEIPFEKNCGEDKKCEANLRVSFSPARSRALRLTAFASLSVELSLSNLEEDAYWVQLDL 821
Query: 71 SHPAGLSYRYVAEGQKQGQLRSLHLTCDSAPVGSQ-GTWSTSCRINHLIFRGGAQITFLA 129
P GLS+R V + Q + ++C+ P S+ + + SC ++ IF+ G +
Sbjct: 822 HFPPGLSFRKVEMLKPHSQ---IPVSCEELPEESRLLSRALSCNVSSPIFKAGHSVALQM 878
Query: 130 TFDVSPKAVLGDRLLLTANVSSENN----TPRTSKTTFQLELPVKYAVYTVVSSHEQFTK 185
F+ + GD + L ANV+ N S TT +P+ Y + ++ E T
Sbjct: 879 MFNTLVNSSWGDSVELHANVTCNNEDSDLLEDNSATTI---IPILYPINILIQDQEDSTL 935
Query: 186 YLNFSESEEKESHVAMHRYQAGGGDAGDWAGVNNLGQRDLPVSINFWVPVELNQEAVWMD 245
Y++F+ K H H YQ R P + +P ++
Sbjct: 936 YVSFTPKGPK-IHQVKHMYQV----------------RIQPSIHDHNIPT--------LE 970
Query: 246 VEVSHPQVPKDCMWLLHECPFYLDSLCPMWVPDVPAETLVLCIFPQNPSLRCSSEKIAPP 305
V PQ P + + W V E V C + L ++E P
Sbjct: 971 AVVGVPQPPSE------------GPITHQW--SVQMEPPVPCHYEDLERLPDAAEPCLPG 1016
Query: 306 ASDFLAHIQKNPVLDCSIAGCLRFRCDVPSFSVQEELDFTLKGNLSFGWVRQI-LQKKVS 364
A FRC V ++E+ + G L V +I S
Sbjct: 1017 A---------------------LFRCPV---VFRQEILVQVIGTLEL--VGEIEASSMFS 1050
Query: 365 VVSVAEITFDTSVYSQLPGQEAFMRAQTTTVLEKYKVHNPTPLIVGSSIGGLLLLALITA 424
+ S I+F++S + L G A + AQ ++ L V S IGGLLLL LI
Sbjct: 1051 LCSSLSISFNSSKHFHLYGSNASL-AQVVMKVDVVYEKQMLYLYVLSGIGGLLLLLLIFI 1109
Query: 425 VLYKVGFFKRQYKEMMEEANG 445
VLYKVGFFKR KE ME G
Sbjct: 1110 VLYKVGFFKRNLKEKMEAGRG 1130
>gi|148728188 integrin, alpha E precursor [Homo sapiens]
Length = 1179
Score = 78.2 bits (191), Expect = 1e-14
Identities = 95/442 (21%), Positives = 174/442 (39%), Gaps = 89/442 (20%)
Query: 14 LPFEKNCGADHICQDNLGISFSFPGLKSLLVGSNLELNAEVMVWNDGEDSYGTTITFSHP 73
LP+EK C C L ++ + + L+VG EL + + N GEDSY T++ ++P
Sbjct: 817 LPYEKACKNKLFCVAELQLATTV-SQQELVVGLTKELTLNINLTNSGEDSYMTSMALNYP 875
Query: 74 AGLSYRYVAEGQKQGQLRSLHLTCDSA-PVGSQGTWSTSCRINHLIF-RGGAQITFLATF 131
L + + + S ++ CD PV S +CRI H + R A ++ + +
Sbjct: 876 RNLQLKRMQKPP------SPNIQCDDPQPVAS--VLIMNCRIGHPVLKRSSAHVSVV--W 925
Query: 132 DVSPKAVLGDRLLLTANVSSENNTPRTSKTTFQLELPVKYAVYTVVSSHEQFTKYLNFSE 191
+ A +T V++ N + T L+ ++ V+S Y+N +
Sbjct: 926 QLEENAFPNRTADITVTVTNSNERRSLANETHTLQF--RHGFVAVLSKPS--IMYVNTGQ 981
Query: 192 SEEKESHVAMHRYQAGGGDAGDWAGVNNLGQRDLPVSINFWVPVELNQEAVWMDVEVSHP 251
H + G N G + VP +L V +++
Sbjct: 982 GLSHHKEFLFHVH-----------GENLFGAE---YQLQICVPTKLRGLQVVAVKKLTRT 1027
Query: 252 QVPKDCMWLLHECPFYLDSLCPMWVPDVPAETLVLCIFPQNPSLRCSSEKIAPPASDFLA 311
Q C W S E+ +S +
Sbjct: 1028 QASTVCTW--------------------------------------SQERACAYSS--VQ 1047
Query: 312 HIQKNPVLDCSIAGCLRFRCDVPSFSVQEELDFTLKGNLSFGWVRQILQKKVSVVSVAEI 371
H+++ + C IA ++ + T+ +S+ ++L+ + + EI
Sbjct: 1048 HVEEWHSVSCVIAS--------------DKENVTVAAEISWDHSEELLKDVTELQILGEI 1093
Query: 372 TFDTSVYSQLPGQEAFMRAQTTTVLEKYKVHNPTPLIVGSSIGGLLLLALITAVLYKVGF 431
+F+ S+Y L + R + T V K + ++ P+I+ S+GGLL+L +I +L+K GF
Sbjct: 1094 SFNKSLYEGLNAENH--RTKITVVFLKDEKYHSLPIIIKGSVGGLLVLIVILVILFKCGF 1151
Query: 432 FKRQYKEMMEEA--NGQIAPEN 451
FKR+Y+++ E+ Q+ EN
Sbjct: 1152 FKRKYQQLNLESIRKAQLKSEN 1173
>gi|116295258 integrin alpha 2 precursor [Homo sapiens]
Length = 1181
Score = 67.8 bits (164), Expect = 2e-11
Identities = 98/437 (22%), Positives = 170/437 (38%), Gaps = 62/437 (14%)
Query: 13 SLPFEKNCGADHICQDNLGISF-SFPGLKS---LLVGSNLELNAEVMVWNDGEDSYGTTI 68
S+PF K+CG D +C +L + P + ++ N L V + N E +Y T I
Sbjct: 782 SIPFHKDCGEDGLCISDLVLDVRQIPAAQEQPFIVSNQNKRLTFSVTLKNKRESAYNTGI 841
Query: 69 TFSHPAGL---SYRYVAEGQKQGQLRSLHLTCDSAPVGSQGTWSTSCRINHLIFRGGAQI 125
L S+ +G + +TC A SQ S +C + + + Q+
Sbjct: 842 VVDFSENLFFASFSLPVDGTE--------VTCQVA--ASQK--SVACDVGYPALKREQQV 889
Query: 126 TFLATFDVSPKAVLGDRLLLTANVSSENNTPRTSKTTFQLELPVKYAVYTVVSSHEQFTK 185
TF FD + + L ++ L+ SE+ + L++P+ Y H +
Sbjct: 890 TFTINFDFNLQN-LQNQASLSFQALSESQEENKADNLVNLKIPLLYDA----EIHLTRST 944
Query: 186 YLNFSE-SEEKESHVAMHRYQAGGGDAGDWAGVNNLGQRDLPVSINFWVPVELNQEAVWM 244
+NF E S + +H ++ D+ F + V V M
Sbjct: 945 NINFYEISSDGNVPSIVHSFE------------------DVGPKFIFSLKVTTGSVPVSM 986
Query: 245 DVEVSH-PQVPKDCMWLLHECPFYLDSLCPMWVPDVPAETLVLCIFPQNPSLRCSSEKIA 303
+ H PQ K+ L+ YL + D+ C NP +
Sbjct: 987 ATVIIHIPQYTKEKNPLM-----YLTGVQTDKAGDIS------CNADINPLKIGQTSSSV 1035
Query: 304 PPASDFLAHIQKNPVLDCSIAGCLRFRCDVPSFSVQEELDFTLKGNLSFGWVRQILQKKV 363
S+ H ++ L+C A C C + ++ E + + G + V
Sbjct: 1036 SFKSENFRHTKE---LNCRTASCSNVTCWLKDVHMKGEYFVNVTTRIWNGTFASSTFQTV 1092
Query: 364 SVVSVAEI-TFDTSVYSQLPGQEAFMRAQTTTVLEKYKVHNPTPLIVGSSIGGLLLLALI 422
+ + AEI T++ +Y ++ + + K PT +I+GS I G+LLL +
Sbjct: 1093 QLTAAAEINTYNPEIYVI---EDNTVTIPLMIMKPDEKAEVPTGVIIGSIIAGILLLLAL 1149
Query: 423 TAVLYKVGFFKRQYKEM 439
A+L+K+GFFKR+Y++M
Sbjct: 1150 VAILWKLGFFKRKYEKM 1166
>gi|88758615 integrin alpha 2b preproprotein [Homo sapiens]
Length = 1039
Score = 60.1 bits (144), Expect = 4e-09
Identities = 92/439 (20%), Positives = 172/439 (39%), Gaps = 51/439 (11%)
Query: 19 NCGADHICQDNLGISFSFPGLKSLLVGSNLELNAEVMVWNDGEDSYGTTITFSHPAGLSY 78
+CG D +C L ++ S G LLVG++ L ++ N+GE +Y + P G Y
Sbjct: 632 DCGEDDVCVPQLQLTASVTG-SPLLVGADNVLELQMDAANEGEGAYEAELAVHLPQGAHY 690
Query: 79 RYVAEGQKQGQLRSLHLTCDSAPVGSQGTWSTSCRINHLIFRGGAQITFLATFDVSPKAV 138
+ + L C+ T C + + + + AQI V
Sbjct: 691 MRALSNVEGFE----RLICNQKKENE--TRVVLCELGNPM-KKNAQIGIAMLVSVGNLEE 743
Query: 139 LGDRLLLTANVSSENNTPRTSKTTFQLELPVKYAVYTVVSSHEQFTKYLNFSESEEKESH 198
G+ + + S+N+ SK L++PV+ + + + +E E+E +
Sbjct: 744 AGESVSFQLQIRSKNSQNPNSKIVL-LDVPVRAEAQVELRGNSFPASLVVAAEEGEREQN 802
Query: 199 V-------AMHRYQAGGGDAGDWAGVNNLGQRDLPVSINFWVPVELNQEAVWMDVEVSHP 251
H Y+ G G++ +SI+ + + +D++ P
Sbjct: 803 SLDSWGPKVEHTYELHNNGPGTVNGLH--------LSIHLPGQSQPSDLLYILDIQ---P 851
Query: 252 QVPKDCMWLLHECPFYLDSLCPMWVPDVPAETLVLCIFPQNPSL-RCSSEKIAPPASDFL 310
Q C P +D W +P+ + P +P+ + +I P +
Sbjct: 852 QGGLQCFPQPPVNPLKVD-----WGLPIPSPS------PIHPAHHKRDRRQIFLPEPEQP 900
Query: 311 AHIQKNPVLDCSIAGCLRFRCDVPSFSVQEELDFTLKGNLSFGWVRQILQKKVS---VVS 367
+ +Q ++ C A C +CD+ + + T+ L+F W+ + Q+ + + S
Sbjct: 901 SRLQDPVLVSCDSAPCTVVQCDLQEMARGQRAMVTV---LAFLWLPSLYQRPLDQFVLQS 957
Query: 368 VAEITFDTSVYS----QLPGQEAFMRAQTTTVLEKYKVHNPTPLIVGSSIGGLLLLALIT 423
A + Y+ LP EA + Q LE+ + P ++ +GGLLLL ++
Sbjct: 958 HAWFNVSSLPYAVPPLSLPRGEAQVWTQLLRALEERAI--PIWWVLVGVLGGLLLLTILV 1015
Query: 424 AVLYKVGFFKRQYKEMMEE 442
++KVGFFKR + E+
Sbjct: 1016 LAMWKVGFFKRNRPPLEED 1034
>gi|52485853 integrin, alpha 11 precursor [Homo sapiens]
Length = 1188
Score = 58.5 bits (140), Expect = 1e-08
Identities = 91/414 (21%), Positives = 161/414 (38%), Gaps = 65/414 (15%)
Query: 27 QDNLGISFSFPGLKSLLVGSNLELNAEVMVWNDGEDSYGTTITFSHPAGLSYRYVAEGQK 86
QD + SF ++ + + E + N GE++Y T + S A L + + QK
Sbjct: 815 QDCSAYTLSFDTTVFIIESTRQRVAVEATLENRGENAYSTVLNISQSANLQFASLI--QK 872
Query: 87 QGQLRSLHLTCDSAPVGSQGTWSTSCRINHLIFRGGAQITFLATFDVSPKAVLGDRLLLT 146
+ S+ + + Q C +++ FR A++ F F+ S K++ L +
Sbjct: 873 EDSDGSIECVNEERRLQKQ-----VCNVSYPFFRAKAKVAFRLDFEFS-KSIFLHHLEIE 926
Query: 147 ANVSSENNTPRTSK--TTFQLELPVKYAVYTVVSSHEQFTKYLNFSESEEKESHVAMHRY 204
S++N ++K L +KY + FT+ + S E K + ++ RY
Sbjct: 927 LAAGSDSNERDSTKEDNVAPLRFHLKYEADVL------FTRSSSLSHYEVKPNS-SLERY 979
Query: 205 QAGGGDAGDWAGVNNLGQRDLPVSINFWVPVELNQEAVWMDVEVSHPQVPKDCMWLLHEC 264
G + NLG P+ M ++++ P + LL
Sbjct: 980 DGIGPPFSCIFRIQNLGL----------FPIH------GMMMKITIPIATRSGNRLLKLR 1023
Query: 265 PFYLDSL---CPMWVPDVPAETLVLCIFPQNPSLRCSSEKIAPPASDFLAHIQKNPVLDC 321
F D C +W S+E P + L ++ P L+
Sbjct: 1024 DFLTDEANTSCNIWGN--------------------STEYRPTPVEEDL---RRAPQLNH 1060
Query: 322 SIAGCLRFRCDVPSFSVQEELDFTLKGNLSFGWVRQILQKKVSVVSV-AEITFDTSVYSQ 380
S + + C++ +E++F L GNL W+R + K + + +S
Sbjct: 1061 SNSDVVSINCNI-RLVPNQEINFHLLGNL---WLRSLKALKYKSMKIMVNAALQRQFHSP 1116
Query: 381 LPGQEAFMRAQTTTVLEKYKVHN-PTPLIVGSSIGGLLLLALITAVLYKVGFFK 433
+E Q + K + P +IVGS++GGLLLLAL+ L+K+GFF+
Sbjct: 1117 FIFREEDPSRQIVFEISKQEDWQVPIWIIVGSTLGGLLLLALLVLALWKLGFFR 1170
>gi|31657142 integrin, alpha 1 precursor [Homo sapiens]
Length = 1179
Score = 58.2 bits (139), Expect = 2e-08
Identities = 90/451 (19%), Positives = 174/451 (38%), Gaps = 95/451 (21%)
Query: 14 LPFEKNCGADHICQDNLGISFSFPGLKSLLVGS-NLELNAEVMVWNDGEDSYGTTITFSH 72
+PF K+CG C +L + + L+V S N + N + V N + +Y T +
Sbjct: 802 IPFAKDCGNKEKCISDLSLHVATTEKDLLIVRSQNDKFNVSLTVKNTKDSAYNTRTIVHY 861
Query: 73 PAGLSYRYVAEGQKQGQLRSLHLTCDSAPVGSQGTWSTSCRINHLIFRGGAQITFLATFD 132
L + + QK +C+S + +C++ + R G +TF F
Sbjct: 862 SPNLVFSGIEAIQKD--------SCES-------NHNITCKVGYPFLRRGEMVTFKILFQ 906
Query: 133 VSPKAVLGD-RLLLTANVSSENNTPRTSKTTFQLELPVKYAV-----------YTVVSSH 180
+ ++ + + L+A SE S + +PVKY V + ++++
Sbjct: 907 FNTSYLMENVTIYLSATSDSEEPPETLSDNVVNISIPVKYEVGLQFYSSASEYHISIAAN 966
Query: 181 EQFTKYLNFSESEEKESHVAMHRYQAGGGDAGDWAGVNNLGQRDLPVSINFWVPVELNQE 240
E + +N +E E ++ ++G + +L +SI+F + N
Sbjct: 967 ETVPEVINSTEDIGNEINIFYLIRKSG-----------SFPMPELKLSISF-PNMTSNGY 1014
Query: 241 AVWMDVEVSHPQVPKDCMWLLHECPFYLDSLCPMWVPDVPAETLVLCIFPQNPSLRCSSE 300
V +S + +C + E PF ++S + S++
Sbjct: 1015 PVLYPTGLSSSE-NANCRPHIFEDPFSINS---------------------GKKMTTSTD 1052
Query: 301 KIAPPASDFLAHIQKNPVLDCSIAGCLRFRCDVPSFSVQEELDFTLKGNLSFGWVRQILQ 360
H+++ +LDC+ C++ S + + N+S IL
Sbjct: 1053 -----------HLKRGTILDCNTCKFATITCNLTSSDISQV-------NVSL-----ILW 1089
Query: 361 KKVSVVSVAEITFDTSVYSQLPGQEAFM-------RAQTTTVLEKYKVHNPTPL--IVGS 411
K + S + + ++ +L + A + + + + K + PL I+ S
Sbjct: 1090 KPTFIKSYFS-SLNLTIRGELRSENASLVLSSSNQKRELAIQISKDGLPGRVPLWVILLS 1148
Query: 412 SIGGLLLLALITAVLYKVGFFKRQYKEMMEE 442
+ GLLLL L+ L+K+GFFKR K+ ME+
Sbjct: 1149 AFAGLLLLMLLILALWKIGFFKRPLKKKMEK 1179
>gi|52485941 integrin, alpha 9 precursor [Homo sapiens]
Length = 1035
Score = 56.2 bits (134), Expect = 6e-08
Identities = 94/447 (21%), Positives = 176/447 (39%), Gaps = 67/447 (14%)
Query: 16 FEKNC-----GADHICQDNLGISFSFPGLKSLLVGSNLELNAEVMVWNDGEDSYGTTITF 70
FE+NC AD Q L +S L +G+ ++ + + N G+D+Y ++F
Sbjct: 616 FERNCRSEDCAADLQLQGKLLLSSMDEKTLYLALGAVKNISLNISISNLGDDAYDANVSF 675
Query: 71 SHPAGLSYRYVAEGQKQGQLRSLHLTCDSAPVGSQGTWSTSCRINHLIFRGGAQITFLAT 130
+ L + + + ++ G ++C+ C + R ++ F
Sbjct: 676 NVSRELFFINMWQKEEMG------ISCELLESDF-----LKCSVGFPFMRSKSKYEFSVI 724
Query: 131 FDVSPKAVLGDRLLLTANVSSEN-NTPRTSK---TTFQLELPVKYAVYTVVSSHEQFTKY 186
FD S + G+ +L+ V++++ NT R+ T L +P+ + V T ++ T +
Sbjct: 725 FDTSHLS--GEEEVLSFIVTAQSGNTERSESLHDNTLVLMVPLMHEVDTSITGIMSPTSF 782
Query: 187 LNFSESEEKESHVAMHRYQAGGGDAGDWAGVNNLGQRDLP---VSINFWVPVELNQEAVW 243
+ + ES + + + + + V N G LP VSI+F + ++
Sbjct: 783 V-YGESVDAANFIQLDDLECHFQPINITLQVYNTGPSTLPGSSVSISFPNRLSSGGAEMF 841
Query: 244 MDVEVSHPQVPKDCMWLLHECPFYLDSLCPMWVPDVPAETLVLCIFPQNPSLRCSSEKIA 303
E+ Q +C + + P CI PQ E I
Sbjct: 842 HVQEMVVGQEKGNCSFQKNPTP---------------------CIIPQE------QENIF 874
Query: 304 PPASDFLAHIQKNPVLDCSIAG--CLRFRCDVPSFSVQEELDFTLKGNLSFGWVRQILQK 361
F + VLDC G CL C+ + + +E + L+ +++
Sbjct: 875 HTIFAFFTKSGRK-VLDCEKPGISCLTAHCNFSALAKEESRTIDIYMLLNTEILKKDSSS 933
Query: 362 KVSVVSVAEITFDTS--VYSQLPGQEAFMRAQTTTVLEKYKVHNPTPLIVG-----SSIG 414
+ +S A++ D + V G + T V E P +VG S +
Sbjct: 934 VIQFMSRAKVKVDPALRVVEIAHGNPE----EVTVVFEALHNLEPRGYVVGWIIAISLLV 989
Query: 415 GLLLLALITAVLYKVGFFKRQYKEMME 441
G+L+ L+ +L+K+GFF+R+YKE++E
Sbjct: 990 GILIFLLLAVLLWKMGFFRRRYKEIIE 1016
>gi|56237029 integrin alpha 5 precursor [Homo sapiens]
Length = 1049
Score = 52.0 bits (123), Expect = 1e-06
Identities = 48/159 (30%), Positives = 70/159 (44%), Gaps = 15/159 (9%)
Query: 294 SLRCSSEKIAPPASDFLAHIQKNPVLDCSIAGCLRFRCDVPSFSVQEELDFTLKGNLSFG 353
SL ++ AP S + Q +L C A C R RC++ QE L +
Sbjct: 887 SLHHQQKREAPSRSSASSGPQ---ILKCPEAECFRLRCELGPLHQQESQSLQLHFRV--- 940
Query: 354 WVRQILQKKVSVVSV-AEITFDT--SVYSQLPGQEAFMRAQTTTVLEKYKVHN----PTP 406
W + LQ++ S+ E + Y LP Q Q T ++ K P
Sbjct: 941 WAKTFLQREHQPFSLQCEAVYKALKMPYRILPRQLPQKERQVATAVQWTKAEGSYGVPLW 1000
Query: 407 LIVGSSIGGLLLLALITAVLYKVGFFKRQ--YKEMMEEA 443
+I+ + + GLLLL L+ +LYK+GFFKR Y ME+A
Sbjct: 1001 IIILAILFGLLLLGLLIYILYKLGFFKRSLPYGTAMEKA 1039
>gi|223468597 integrin alpha-V isoform 3 precursor [Homo sapiens]
Length = 1012
Score = 50.4 bits (119), Expect = 3e-06
Identities = 92/454 (20%), Positives = 168/454 (37%), Gaps = 56/454 (12%)
Query: 19 NCGADHICQDNLGISFSFPGLKSLLVGSNLELNAEVMVWNDGEDSYGTTITFSHPAGLSY 78
+CG D++C+ L +S K + +G + L V N GE +Y + S P +
Sbjct: 589 DCGEDNVCKPKLEVSVD-SDQKKIYIGDDNPLTLIVKAQNQGEGAYEAELIVSIPLQADF 647
Query: 79 RYVAEGQKQGQLRSLHLTCDSAPVGSQGTWSTSCRINHLIFRGGAQITFLATFDVSPKAV 138
V + L+C A T C + + + + G Q+ F V ++
Sbjct: 648 IGVVRNNEA----LARLSC--AFKTENQTRQVVCDLGNPM-KAGTQLLAGLRFSVHQQSE 700
Query: 139 LGDRLLLTANVSSENNTPRTSKT-TFQLELPVKYAVYT--VVSSHEQFTKYLNFS----- 190
+ + + S N + S + +++L V AV V S F N+
Sbjct: 701 MDTSVKFDLQIQSSNLFDKVSPVVSHKVDLAVLAAVEIRGVSSPDHIFLPIPNWEHKENP 760
Query: 191 ESEEKESHVAMHRYQAGGGDAGDWAGVNNLGQRDLPVSINFWVPVELNQEAVWMDVEVSH 250
E+EE V H Y+ ++ ++ P + N +
Sbjct: 761 ETEEDVGPVVQHIYELRNNGPSSFS----------KAMLHLQWPYKYNNNTL-------- 802
Query: 251 PQVPKDCMWLLH-ECPFYLDSLCPMWVPDVPAETLVLCIFPQNPSLRCSSEKIAPPASDF 309
+++LH + ++ M + + + L +N ++ E+
Sbjct: 803 -------LYILHYDIDGPMNCTSDMEINPLRIKISSLQTTEKNDTVAGQGERDHLITKRD 855
Query: 310 LAHIQKN-PVLDCSIAGCLRFRCDVPSFSVQEELDFTLKGNLSFGWVRQILQKK-----V 363
LA + + L C +A CL+ C V + +K L W + K+
Sbjct: 856 LALSEGDIHTLGCGVAQCLKIVCQVGRLDRGKSAILYVKSLL---WTETFMNKENQNHSY 912
Query: 364 SVVSVAEITFDTSVYSQLPGQE----AFMRAQTTTVLEKYKVHNPTPLIVGSSIGGLLLL 419
S+ S A Y LP ++ + T ++ + P +I+ + + GLLLL
Sbjct: 913 SLKSSASFNVIEFPYKNLPIEDITNSTLVTTNVTWGIQPAPMPVPVWVIILAVLAGLLLL 972
Query: 420 ALITAVLYKVGFFKRQYKEMMEEANGQIAP-ENG 452
A++ V+Y++GFFKR E+ Q+ P ENG
Sbjct: 973 AVLVFVMYRMGFFKRVRPPQEEQEREQLQPHENG 1006
>gi|223468595 integrin alpha-V isoform 2 [Homo sapiens]
Length = 1002
Score = 50.4 bits (119), Expect = 3e-06
Identities = 92/454 (20%), Positives = 168/454 (37%), Gaps = 56/454 (12%)
Query: 19 NCGADHICQDNLGISFSFPGLKSLLVGSNLELNAEVMVWNDGEDSYGTTITFSHPAGLSY 78
+CG D++C+ L +S K + +G + L V N GE +Y + S P +
Sbjct: 579 DCGEDNVCKPKLEVSVD-SDQKKIYIGDDNPLTLIVKAQNQGEGAYEAELIVSIPLQADF 637
Query: 79 RYVAEGQKQGQLRSLHLTCDSAPVGSQGTWSTSCRINHLIFRGGAQITFLATFDVSPKAV 138
V + L+C A T C + + + + G Q+ F V ++
Sbjct: 638 IGVVRNNEA----LARLSC--AFKTENQTRQVVCDLGNPM-KAGTQLLAGLRFSVHQQSE 690
Query: 139 LGDRLLLTANVSSENNTPRTSKT-TFQLELPVKYAVYT--VVSSHEQFTKYLNFS----- 190
+ + + S N + S + +++L V AV V S F N+
Sbjct: 691 MDTSVKFDLQIQSSNLFDKVSPVVSHKVDLAVLAAVEIRGVSSPDHIFLPIPNWEHKENP 750
Query: 191 ESEEKESHVAMHRYQAGGGDAGDWAGVNNLGQRDLPVSINFWVPVELNQEAVWMDVEVSH 250
E+EE V H Y+ ++ ++ P + N +
Sbjct: 751 ETEEDVGPVVQHIYELRNNGPSSFS----------KAMLHLQWPYKYNNNTL-------- 792
Query: 251 PQVPKDCMWLLH-ECPFYLDSLCPMWVPDVPAETLVLCIFPQNPSLRCSSEKIAPPASDF 309
+++LH + ++ M + + + L +N ++ E+
Sbjct: 793 -------LYILHYDIDGPMNCTSDMEINPLRIKISSLQTTEKNDTVAGQGERDHLITKRD 845
Query: 310 LAHIQKN-PVLDCSIAGCLRFRCDVPSFSVQEELDFTLKGNLSFGWVRQILQKK-----V 363
LA + + L C +A CL+ C V + +K L W + K+
Sbjct: 846 LALSEGDIHTLGCGVAQCLKIVCQVGRLDRGKSAILYVKSLL---WTETFMNKENQNHSY 902
Query: 364 SVVSVAEITFDTSVYSQLPGQE----AFMRAQTTTVLEKYKVHNPTPLIVGSSIGGLLLL 419
S+ S A Y LP ++ + T ++ + P +I+ + + GLLLL
Sbjct: 903 SLKSSASFNVIEFPYKNLPIEDITNSTLVTTNVTWGIQPAPMPVPVWVIILAVLAGLLLL 962
Query: 420 ALITAVLYKVGFFKRQYKEMMEEANGQIAP-ENG 452
A++ V+Y++GFFKR E+ Q+ P ENG
Sbjct: 963 AVLVFVMYRMGFFKRVRPPQEEQEREQLQPHENG 996
>gi|4504763 integrin alpha-V isoform 1 precursor [Homo sapiens]
Length = 1048
Score = 50.4 bits (119), Expect = 3e-06
Identities = 92/454 (20%), Positives = 168/454 (37%), Gaps = 56/454 (12%)
Query: 19 NCGADHICQDNLGISFSFPGLKSLLVGSNLELNAEVMVWNDGEDSYGTTITFSHPAGLSY 78
+CG D++C+ L +S K + +G + L V N GE +Y + S P +
Sbjct: 625 DCGEDNVCKPKLEVSVD-SDQKKIYIGDDNPLTLIVKAQNQGEGAYEAELIVSIPLQADF 683
Query: 79 RYVAEGQKQGQLRSLHLTCDSAPVGSQGTWSTSCRINHLIFRGGAQITFLATFDVSPKAV 138
V + L+C A T C + + + + G Q+ F V ++
Sbjct: 684 IGVVRNNEA----LARLSC--AFKTENQTRQVVCDLGNPM-KAGTQLLAGLRFSVHQQSE 736
Query: 139 LGDRLLLTANVSSENNTPRTSKT-TFQLELPVKYAVYT--VVSSHEQFTKYLNFS----- 190
+ + + S N + S + +++L V AV V S F N+
Sbjct: 737 MDTSVKFDLQIQSSNLFDKVSPVVSHKVDLAVLAAVEIRGVSSPDHIFLPIPNWEHKENP 796
Query: 191 ESEEKESHVAMHRYQAGGGDAGDWAGVNNLGQRDLPVSINFWVPVELNQEAVWMDVEVSH 250
E+EE V H Y+ ++ ++ P + N +
Sbjct: 797 ETEEDVGPVVQHIYELRNNGPSSFS----------KAMLHLQWPYKYNNNTL-------- 838
Query: 251 PQVPKDCMWLLH-ECPFYLDSLCPMWVPDVPAETLVLCIFPQNPSLRCSSEKIAPPASDF 309
+++LH + ++ M + + + L +N ++ E+
Sbjct: 839 -------LYILHYDIDGPMNCTSDMEINPLRIKISSLQTTEKNDTVAGQGERDHLITKRD 891
Query: 310 LAHIQKN-PVLDCSIAGCLRFRCDVPSFSVQEELDFTLKGNLSFGWVRQILQKK-----V 363
LA + + L C +A CL+ C V + +K L W + K+
Sbjct: 892 LALSEGDIHTLGCGVAQCLKIVCQVGRLDRGKSAILYVKSLL---WTETFMNKENQNHSY 948
Query: 364 SVVSVAEITFDTSVYSQLPGQE----AFMRAQTTTVLEKYKVHNPTPLIVGSSIGGLLLL 419
S+ S A Y LP ++ + T ++ + P +I+ + + GLLLL
Sbjct: 949 SLKSSASFNVIEFPYKNLPIEDITNSTLVTTNVTWGIQPAPMPVPVWVIILAVLAGLLLL 1008
Query: 420 ALITAVLYKVGFFKRQYKEMMEEANGQIAP-ENG 452
A++ V+Y++GFFKR E+ Q+ P ENG
Sbjct: 1009 AVLVFVMYRMGFFKRVRPPQEEQEREQLQPHENG 1042
>gi|67191027 integrin alpha 4 precursor [Homo sapiens]
Length = 1032
Score = 48.5 bits (114), Expect = 1e-05
Identities = 43/186 (23%), Positives = 73/186 (39%), Gaps = 11/186 (5%)
Query: 18 KNCGADHICQDNLGISFSFPGLKSLLVGSNLELNAEVMVWNDGEDSYGTTITFSHPAGLS 77
+NC AD +G L VGS L V ++N G+D+Y TT+ P GL
Sbjct: 625 ENCSADLQVSAKIGFLKPHENKTYLAVGSMKTLMLNVSLFNAGDDAYETTLHVKLPVGLY 684
Query: 78 YRYVAEGQKQGQLRSLHLTCDSAPVGSQGTWSTSCRINHLIFRGGAQITFLATFDVSPKA 137
+ + E L + C+ + G C I ++ ++I DVS +
Sbjct: 685 FIKILE------LEEKQINCE--VTDNSGVVQLDCSIGYIYVDHLSRIDISFLLDVSSLS 736
Query: 138 VLGDRLLLTANVSSEN--NTPRTSKTTFQLELPVKYAVYTVVSSHEQFTKYLNFSESEEK 195
+ L +T + + EN + + +P+KY V V T ++ + ++E
Sbjct: 737 RAEEDLSITVHATCENEEEMDNLKHSRVTVAIPLKYEVKLTVHGFVNPTSFV-YGSNDEN 795
Query: 196 ESHVAM 201
E M
Sbjct: 796 EPETCM 801
Score = 43.1 bits (100), Expect = 5e-04
Identities = 19/38 (50%), Positives = 29/38 (76%)
Query: 407 LIVGSSIGGLLLLALITAVLYKVGFFKRQYKEMMEEAN 444
+I S + GL++L LI+ V++K GFFKRQYK +++E N
Sbjct: 980 IISSSLLLGLIVLLLISYVMWKAGFFKRQYKSILQEEN 1017
>gi|222418615 integrin alpha 7 isoform 3 [Homo sapiens]
Length = 1044
Score = 46.6 bits (109), Expect = 5e-05
Identities = 116/469 (24%), Positives = 177/469 (37%), Gaps = 86/469 (18%)
Query: 17 EKNCGADHICQDNLGI-----------------SFSFPGLKSLLVGSNLE-LNAEVMVWN 58
++ CG D ICQ NL + G +L S + E+MV N
Sbjct: 541 KQGCGEDKICQSNLQLVRARFCTRVSDTEFQPLPMDVDGTTALFALSGQPVIGLELMVTN 600
Query: 59 ----------DGEDSYGTTITFSHPAGLSYRYVAEGQKQGQLRSLHLTCDSAPVGSQGTW 108
DG+D++ + P L Y V R+L + ++
Sbjct: 601 LPSDPAQPQADGDDAHEAQLLVMLPDSLHYSGV---------RALDPAEKPLCLSNENAS 651
Query: 109 STSCRINHLIFRGGAQITF---LATFDVSPKAVLGDRLLLTANVSSENNTPRTSKTTFQL 165
C + + + RG AQ+TF L+T +S + + LL A +S + P +++ +
Sbjct: 652 HVECELGNPMKRG-AQVTFYLILSTSGISIETTELEVELLLATISEQELHPVSARARVFI 710
Query: 166 ELPVKYAVYTVVSSHEQFTKYLNFSESEEKESHVAMHRYQAGGGDAGDWAGVNNLGQ--R 223
ELP+ A + + L FS E AM + G V+N GQ R
Sbjct: 711 ELPLSIAGMAI-------PQQLFFSGVVRGER--AMQSERDVGSKVKYEVTVSNQGQSLR 761
Query: 224 DLPVS-INFWVPVELNQEAVW----MDVEVSHPQVPKD---CMWLLHECPFYLDSLCPMW 275
L + +N P E+ W M VE+ Q P C + +DS
Sbjct: 762 TLGSAFLNIMWPHEI-ANGKWLLYPMQVELEGGQGPGQKGLCSPRPNILHLDVDSRDRRR 820
Query: 276 VPDVPAETLVLCIFPQNPSLRCSSEKIAPPASDFLAHIQKNPVLDCS--IAGCLRFRCDV 333
P E Q P R P S A +KN LDC+ A C+ F C
Sbjct: 821 RELEPPEQ-------QEPGERQEPSMSWWPVSS--AEKKKNITLDCARGTANCVVFSC-- 869
Query: 334 PSFSVQEELDFTLKGNLSFGWVRQILQ-----KKVSVVSVAEITFDTSVYSQLPGQEAFM 388
P +S + G L W L+ K + V+ A IT +S+ L ++A
Sbjct: 870 PLYSFDRAAVLHVWGRL---WNSTFLEEYSAVKSLEVIVRANITVKSSI-KNLMLRDAST 925
Query: 389 RAQTTTVLEKYKVHN---PTPLIVGSSIGGLLLLALITAVLYKVGFFKR 434
L+ V P +I+ + + GLL+LAL+ +L+K+GFFKR
Sbjct: 926 VIPVMVYLDPMAVVAEGVPWWVILLAVLAGLLVLALLVLLLWKMGFFKR 974
>gi|222418613 integrin alpha 7 isoform 1 precursor [Homo sapiens]
Length = 1141
Score = 46.6 bits (109), Expect = 5e-05
Identities = 116/469 (24%), Positives = 177/469 (37%), Gaps = 86/469 (18%)
Query: 17 EKNCGADHICQDNLGI-----------------SFSFPGLKSLLVGSNLE-LNAEVMVWN 58
++ CG D ICQ NL + G +L S + E+MV N
Sbjct: 638 KQGCGEDKICQSNLQLVRARFCTRVSDTEFQPLPMDVDGTTALFALSGQPVIGLELMVTN 697
Query: 59 ----------DGEDSYGTTITFSHPAGLSYRYVAEGQKQGQLRSLHLTCDSAPVGSQGTW 108
DG+D++ + P L Y V R+L + ++
Sbjct: 698 LPSDPAQPQADGDDAHEAQLLVMLPDSLHYSGV---------RALDPAEKPLCLSNENAS 748
Query: 109 STSCRINHLIFRGGAQITF---LATFDVSPKAVLGDRLLLTANVSSENNTPRTSKTTFQL 165
C + + + RG AQ+TF L+T +S + + LL A +S + P +++ +
Sbjct: 749 HVECELGNPMKRG-AQVTFYLILSTSGISIETTELEVELLLATISEQELHPVSARARVFI 807
Query: 166 ELPVKYAVYTVVSSHEQFTKYLNFSESEEKESHVAMHRYQAGGGDAGDWAGVNNLGQ--R 223
ELP+ A + + L FS E AM + G V+N GQ R
Sbjct: 808 ELPLSIAGMAI-------PQQLFFSGVVRGER--AMQSERDVGSKVKYEVTVSNQGQSLR 858
Query: 224 DLPVS-INFWVPVELNQEAVW----MDVEVSHPQVPKD---CMWLLHECPFYLDSLCPMW 275
L + +N P E+ W M VE+ Q P C + +DS
Sbjct: 859 TLGSAFLNIMWPHEI-ANGKWLLYPMQVELEGGQGPGQKGLCSPRPNILHLDVDSRDRRR 917
Query: 276 VPDVPAETLVLCIFPQNPSLRCSSEKIAPPASDFLAHIQKNPVLDCS--IAGCLRFRCDV 333
P E Q P R P S A +KN LDC+ A C+ F C
Sbjct: 918 RELEPPEQ-------QEPGERQEPSMSWWPVSS--AEKKKNITLDCARGTANCVVFSC-- 966
Query: 334 PSFSVQEELDFTLKGNLSFGWVRQILQ-----KKVSVVSVAEITFDTSVYSQLPGQEAFM 388
P +S + G L W L+ K + V+ A IT +S+ L ++A
Sbjct: 967 PLYSFDRAAVLHVWGRL---WNSTFLEEYSAVKSLEVIVRANITVKSSI-KNLMLRDAST 1022
Query: 389 RAQTTTVLEKYKVHN---PTPLIVGSSIGGLLLLALITAVLYKVGFFKR 434
L+ V P +I+ + + GLL+LAL+ +L+K+GFFKR
Sbjct: 1023 VIPVMVYLDPMAVVAEGVPWWVILLAVLAGLLVLALLVLLLWKMGFFKR 1071
>gi|222418611 integrin alpha 7 isoform 2 precursor [Homo sapiens]
Length = 1137
Score = 46.6 bits (109), Expect = 5e-05
Identities = 116/469 (24%), Positives = 177/469 (37%), Gaps = 86/469 (18%)
Query: 17 EKNCGADHICQDNLGI-----------------SFSFPGLKSLLVGSNLE-LNAEVMVWN 58
++ CG D ICQ NL + G +L S + E+MV N
Sbjct: 634 KQGCGEDKICQSNLQLVRARFCTRVSDTEFQPLPMDVDGTTALFALSGQPVIGLELMVTN 693
Query: 59 ----------DGEDSYGTTITFSHPAGLSYRYVAEGQKQGQLRSLHLTCDSAPVGSQGTW 108
DG+D++ + P L Y V R+L + ++
Sbjct: 694 LPSDPAQPQADGDDAHEAQLLVMLPDSLHYSGV---------RALDPAEKPLCLSNENAS 744
Query: 109 STSCRINHLIFRGGAQITF---LATFDVSPKAVLGDRLLLTANVSSENNTPRTSKTTFQL 165
C + + + RG AQ+TF L+T +S + + LL A +S + P +++ +
Sbjct: 745 HVECELGNPMKRG-AQVTFYLILSTSGISIETTELEVELLLATISEQELHPVSARARVFI 803
Query: 166 ELPVKYAVYTVVSSHEQFTKYLNFSESEEKESHVAMHRYQAGGGDAGDWAGVNNLGQ--R 223
ELP+ A + + L FS E AM + G V+N GQ R
Sbjct: 804 ELPLSIAGMAI-------PQQLFFSGVVRGER--AMQSERDVGSKVKYEVTVSNQGQSLR 854
Query: 224 DLPVS-INFWVPVELNQEAVW----MDVEVSHPQVPKD---CMWLLHECPFYLDSLCPMW 275
L + +N P E+ W M VE+ Q P C + +DS
Sbjct: 855 TLGSAFLNIMWPHEI-ANGKWLLYPMQVELEGGQGPGQKGLCSPRPNILHLDVDSRDRRR 913
Query: 276 VPDVPAETLVLCIFPQNPSLRCSSEKIAPPASDFLAHIQKNPVLDCS--IAGCLRFRCDV 333
P E Q P R P S A +KN LDC+ A C+ F C
Sbjct: 914 RELEPPEQ-------QEPGERQEPSMSWWPVSS--AEKKKNITLDCARGTANCVVFSC-- 962
Query: 334 PSFSVQEELDFTLKGNLSFGWVRQILQ-----KKVSVVSVAEITFDTSVYSQLPGQEAFM 388
P +S + G L W L+ K + V+ A IT +S+ L ++A
Sbjct: 963 PLYSFDRAAVLHVWGRL---WNSTFLEEYSAVKSLEVIVRANITVKSSI-KNLMLRDAST 1018
Query: 389 RAQTTTVLEKYKVHN---PTPLIVGSSIGGLLLLALITAVLYKVGFFKR 434
L+ V P +I+ + + GLL+LAL+ +L+K+GFFKR
Sbjct: 1019 VIPVMVYLDPMAVVAEGVPWWVILLAVLAGLLVLALLVLLLWKMGFFKR 1067
>gi|38569398 integrin, alpha 10 precursor [Homo sapiens]
Length = 1167
Score = 46.6 bits (109), Expect = 5e-05
Identities = 43/187 (22%), Positives = 80/187 (42%), Gaps = 31/187 (16%)
Query: 14 LPFEKNCGADHICQDNLGISFSFP-------------GLKSLLVGSNLELNAEVMVWNDG 60
+PF K+CG D+ C +L + + G + +LV + LE N
Sbjct: 783 VPFSKDCGPDNECVTDLVLQVNMDIRGSRKAPFVVRGGRRKVLVSTTLE--------NRK 834
Query: 61 EDSYGTTITFSHPAGLSYRYVAEGQKQGQLRSLHLTCDSAPVGSQGTWSTSCRINHLIFR 120
E++Y T+++ L + Q++ ++ + C +AP + C + H +F+
Sbjct: 835 ENAYNTSLSLIFSRNLHLASLTP-QRESPIK---VEC-AAP----SAHARLCSVGHPVFQ 885
Query: 121 GGAQITFLATFDVSPKAVLGDRLL-LTANVSSENNTPRTSKTTFQLELPVKYAVYTVVSS 179
GA++TFL F+ S ++L + LTA+ S T Q ++Y + + SS
Sbjct: 886 TGAKVTFLLEFEFSCSSLLSQVFVKLTASSDSLERNGTLQDNTAQTSAYIQYEPHLLFSS 945
Query: 180 HEQFTKY 186
+Y
Sbjct: 946 ESTLHRY 952
Score = 40.4 bits (93), Expect = 0.003
Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 313 IQKNPVLDCSIAGCLRFRCDVPSFSVQEELDFTLKGNLSFGWVRQILQKKVSVVSVAEIT 372
+Q L+ S C RC + + E+ L + + R+ K ++VVS E+
Sbjct: 1032 LQHTNRLNGSNTQCQVVRCHLGQLAKGTEVSVGLLRLVHNEFFRRAKFKSLTVVSTFELG 1091
Query: 373 FDTSVYSQLPGQEAFMRAQTTTVLEKYKVHNPTPLIVGSSIGGLLLLALITAVLYKVGFF 432
+ QL + + V++ + +++GS +GGLLLLAL+ L+K+GFF
Sbjct: 1092 TEEGSVLQLTEASRWSES-LLEVVQTRPILISLWILIGSVLGGLLLLALLVFCLWKLGFF 1150
Query: 433 KRQYKEMMEE 442
+K++ EE
Sbjct: 1151 --AHKKIPEE 1158
>gi|49170034 integrin, alpha 8 [Homo sapiens]
Length = 1063
Score = 42.0 bits (97), Expect = 0.001
Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 10/124 (8%)
Query: 318 VLDCSIAGCLRFRCDVPSFSVQEELDFTLKGNLSFGWVRQILQKKVSVVSVAE-ITFDTS 376
+L+C+ CL+ C V E ++ L W LQ+K ++A ++F+
Sbjct: 921 ILNCTNIECLQISCAVGRLEGGESAVLKVRSRL---WAHTFLQRKNDPYALASLVSFEVK 977
Query: 377 V--YSQLPGQ--EAFMRAQTTTVLEKYKVHNPTPL--IVGSSIGGLLLLALITAVLYKVG 430
Y+ P + E + +T+ + V PL I+ + + GLL+LA++T L+K G
Sbjct: 978 KMPYTDQPAKLPEGSIAIKTSVIWATPNVSFSIPLWVIILAILLGLLVLAILTLALWKCG 1037
Query: 431 FFKR 434
FF R
Sbjct: 1038 FFDR 1041
>gi|119395740 integrin alpha chain, alpha 6 isoform a precursor [Homo
sapiens]
Length = 1091
Score = 39.3 bits (90), Expect = 0.008
Identities = 103/471 (21%), Positives = 181/471 (38%), Gaps = 102/471 (21%)
Query: 17 EKNCGADHICQDNLGISFSF----------------PGLKSLLVGSNLELNAEVMVWN-- 58
++ CG D++C NL + + F G+ L++ ++ E+ V N
Sbjct: 623 KEGCGDDNVCNSNLKLEYKFCTREGNQDKFSYLPIQKGVPELVLKDQKDIALEITVTNSP 682
Query: 59 --------DGEDSYGTTITFSHPAGLSYRYVAEGQKQGQLRSL---HLTCDSAPVGSQGT 107
DG+D++ + + P L+Y E LR+ L+C + GSQ
Sbjct: 683 SNPRNPTKDGDDAHEAKLIATFPDTLTYSAYRE------LRAFPEKQLSCVANQNGSQ-- 734
Query: 108 WSTSCRINHLIFRGGAQITFL-------ATFDVSPKAVLGDRLLLTANVSSENNTPRTSK 160
C + + F+ + +TF TFD +P + +L T+N +N P T+K
Sbjct: 735 --ADCELGN-PFKRNSNVTFYLVLSTTEVTFD-TPDLDINLKLETTSN--QDNLAPITAK 788
Query: 161 TTFQLELPVKYAVYTVVSSHEQFTKYLNFSESEEKESHVAMHRYQAGGGDAGDWA----- 215
+EL + + K S V GG G+ A
Sbjct: 789 AKVVIELLLSVS-------------------GVAKPSQVYF-----GGTVVGEQAMKSED 824
Query: 216 GVNNLGQRDLPVSINFWVPVELNQEAVWMDVEVSHPQVPKDCMWLLHECPFYLDSLCPMW 275
V +L + + V IN P+ A + + P+ + WLL+ L +
Sbjct: 825 EVGSLIEYEFRV-INLGKPLTNLGTAT---LNIQWPKEISNGKWLLYLVKVESKGLEKVT 880
Query: 276 V-PDVPAETLVLCIFPQNPSLRCSSEKIAPPASDFLAHIQKN-PVLDCSI-AGCLRFRCD 332
P +L L + R +EK F ++ L+CS+ C+ RC
Sbjct: 881 CEPQKEINSLNLTESHNSRKKREITEKQIDDNRKFSLFAERKYQTLNCSVNVNCVNIRC- 939
Query: 333 VPSFSVQEELDFTLKGNLSFGWVRQILQK--KVSVVSVAEITF-DTSVYSQ---LPGQEA 386
P + + L+ L W L++ K++ + + F D + ++ LP
Sbjct: 940 -PLRGLDSKASLILRSRL---WNSTFLEEYSKLNYLDILMRAFIDVTAAAENIRLPNAGT 995
Query: 387 FMRA---QTTTVLEKYKVHNPTPLIVGSSIGGLLLLALITAVLYKVGFFKR 434
+R + TV + V P +I+ + + G+L+LAL+ +L+K GFFKR
Sbjct: 996 QVRVTVFPSKTVAQYSGV--PWWIILVAILAGILMLALLVFILWKCGFFKR 1044
>gi|119395742 integrin alpha chain, alpha 6 isoform b precursor [Homo
sapiens]
Length = 1073
Score = 38.5 bits (88), Expect = 0.013
Identities = 105/478 (21%), Positives = 184/478 (38%), Gaps = 108/478 (22%)
Query: 17 EKNCGADHICQDNLGISFSF----------------PGLKSLLVGSNLELNAEVMVWN-- 58
++ CG D++C NL + + F G+ L++ ++ E+ V N
Sbjct: 623 KEGCGDDNVCNSNLKLEYKFCTREGNQDKFSYLPIQKGVPELVLKDQKDIALEITVTNSP 682
Query: 59 --------DGEDSYGTTITFSHPAGLSYRYVAEGQKQGQLRSL---HLTCDSAPVGSQGT 107
DG+D++ + + P L+Y E LR+ L+C + GSQ
Sbjct: 683 SNPRNPTKDGDDAHEAKLIATFPDTLTYSAYRE------LRAFPEKQLSCVANQNGSQA- 735
Query: 108 WSTSCRINHLIFRGGAQITFL-------ATFDVSPKAVLGDRLLLTANVSSENNTPRTSK 160
C + + F+ + +TF TFD +P + +L T+N + +K
Sbjct: 736 ---DCELGNP-FKRNSNVTFYLVLSTTEVTFD-TPDLDINLKLETTSNQDNLAPITAKAK 790
Query: 161 TTFQLELPVK--------YAVYTVVSSHEQFTKYLNFSESEEKESHVAMHRYQAGGGDAG 212
+L L V Y TVV EQ K SE++ + + ++
Sbjct: 791 VVIELLLSVSGVAKPSQVYFGGTVVG--EQAMK------SEDEVGSLIEYEFR------- 835
Query: 213 DWAGVNNLGQRDLPVSINFWVPVELNQEAVWMDVEVSHPQVPKDCMWLLHECPFYLDSLC 272
V NLG+ P+ A + + P+ + WLL+ L
Sbjct: 836 ----VINLGK-----------PLTNLGTAT---LNIQWPKEISNGKWLLYLVKVESKGLE 877
Query: 273 PMWV-PDVPAETLVLCIFPQNPSLRCSSEKIAPPASDF-LAHIQKNPVLDCSI-AGCLRF 329
+ P +L L + R +EK F L +K L+CS+ C+
Sbjct: 878 KVTCEPQKEINSLNLTESHNSRKKREITEKQIDDNRKFSLFAERKYQTLNCSVNVNCVNI 937
Query: 330 RCDVPSFSVQEELDFTLKGNLSFGWVRQILQK--KVSVVSVAEITF-DTSVYSQ---LPG 383
RC P + + L+ L W L++ K++ + + F D + ++ LP
Sbjct: 938 RC--PLRGLDSKASLILRSRL---WNSTFLEEYSKLNYLDILMRAFIDVTAAAENIRLPN 992
Query: 384 QEAFMRAQ---TTTVLEKYKVHNPTPLIVGSSIGGLLLLALITAVLYKVGFFKRQYKE 438
+R + TV + V P +I+ + + G+L+LAL+ +L+K GFFKR K+
Sbjct: 993 AGTQVRVTVFPSKTVAQYSGV--PWWIILVAILAGILMLALLVFILWKCGFFKRNKKD 1048
>gi|4504747 integrin alpha 3 isoform a precursor [Homo sapiens]
Length = 1051
Score = 34.7 bits (78), Expect = 0.19
Identities = 22/47 (46%), Positives = 26/47 (55%), Gaps = 5/47 (10%)
Query: 415 GLLLLALITAVLYKVGFFKRQYKEMMEEANGQIAPENGTQTPSPPSE 461
GLLLL LI +L+K GFFKR + EA Q A + S PSE
Sbjct: 1002 GLLLLGLIILLLWKCGFFKRARTRALYEAKRQKA-----EMKSQPSE 1043
>gi|38016947 complement component 5 preproprotein [Homo sapiens]
Length = 1676
Score = 32.7 bits (73), Expect = 0.71
Identities = 25/93 (26%), Positives = 38/93 (40%), Gaps = 3/93 (3%)
Query: 101 PVGSQGTWSTSCRINHLIFRGGAQITFLATFDVSPKAVLGDRLLLTANVSSENNTPRTSK 160
P+ QGT R N L I FD+ P + L+ N EN P ++
Sbjct: 1126 PIKLQGTLPVEARENSLYLTAFTVIGIRKAFDICPLVKIDTALIKADNFLLENTLP--AQ 1183
Query: 161 TTFQLELPVKYAVYTVVSSHEQFTKYLNFSESE 193
+TF L + YA+ +H QF ++ + E
Sbjct: 1184 STFTLAISA-YALSLGDKTHPQFRSIVSALKRE 1215
>gi|110227857 thiamin pyrophosphokinase 1 isoform b [Homo sapiens]
Length = 194
Score = 30.0 bits (66), Expect = 4.6
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 173 VYTVVSSHEQFTKYLNFSESEEKESHV-AMHRYQAGGGDAGDWAGVNNLGQRDLPVS 228
+ T H FTK L + + +E + HR G GDW G+ +GQ + V+
Sbjct: 91 ISTPDQDHTDFTKCLKMLQKKIEEKDLKGKHRLHVDTGMEGDWCGLIPVGQPCMQVT 147
>gi|110815802 hypothetical protein LOC84267 [Homo sapiens]
Length = 341
Score = 29.3 bits (64), Expect = 7.9
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 184 TKYLNFSESEEKESHVAMHRYQAGGGDAGDW---AGVNNLGQRDLPV-SINFWVPVELNQ 239
T LNFS E++ H + RY+ G +G W A VN +P+ S +++ V L+Q
Sbjct: 71 TDTLNFSFWSEQDEHKCVVRYR-GKTYSGYWSLCAAVNRALDEGIPITSASYYATVTLDQ 129
Query: 240 --EAVWMDVEVSHPQV 253
+ D +VS P V
Sbjct: 130 VRNILRSDTDVSMPLV 145
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.134 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,612,819
Number of Sequences: 37866
Number of extensions: 825619
Number of successful extensions: 1988
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1913
Number of HSP's gapped (non-prelim): 58
length of query: 462
length of database: 18,247,518
effective HSP length: 106
effective length of query: 356
effective length of database: 14,233,722
effective search space: 5067205032
effective search space used: 5067205032
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.