Guide to the Human Genome
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Name: C9orf64 Sequence: fasta or formatted (341aa) NCBI GI: 110815802
Description:

hypothetical protein LOC84267

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         22           2
 C cysteine            2.3          8           1
 D aspartate           6.7         23           2
 E glutamate           8.2         28           2
 F phenylalanine       3.8         13           1
 G glycine             6.5         22           2
 H histidine           2.3          8           1
 I isoleucine          5.3         18           1
 K lysine              5.6         19           2
 L leucine            11.7         40           3
 M methionine          1.8          6           1
 N asparagine          3.5         12           1
 P proline             2.6          9           1
 Q glutamine           2.1          7           1
 R arginine            7.0         24           2
 S serine              7.3         25           2
 T threonine           3.2         11           1
 V valine              7.0         24           2
 W tryptophan          2.1          7           1
 Y tyrosine            4.4         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC84267 
LOC100289853          0.006   PREDICTED: hypothetical protein XP_002347690 
RNF17                 0.006   ring finger protein 17 
UNC5D                 0.004   unc-5 homolog D 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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