Search of human proteins with 239750840

Search of human proteins with 239750840

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239750840 PREDICTED: hypothetical protein XP_002347578 [Homo
sapiens]
         (68 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239750840 PREDICTED: hypothetical protein XP_002347578 [Homo ...   136   3e-33
gi|239745202 PREDICTED: hypothetical protein XP_002343408 [Homo ...   136   3e-33
gi|63055067 guanine nucleotide binding protein (G protein), gamm...   121   1e-28
gi|21361097 DNAJC25-GNG10 protein [Homo sapiens]                       82   7e-17
gi|4885287 guanine nucleotide binding protein (G protein), gamma...    73   4e-14
gi|32698769 guanine nucleotide binding protein (G protein), gamm...    69   1e-12
gi|51036603 G-protein gamma-12 subunit [Homo sapiens]                  60   3e-10
gi|54114974 guanine nucleotide binding protein (G protein), gamm...    60   4e-10
gi|6912394 guanine nucleotide binding protein (G protein), gamma...    57   3e-09
gi|148922937 guanine nucleotide binding protein (G protein), gam...    54   3e-08
gi|148922892 guanine nucleotide binding protein (G protein), gam...    54   3e-08
gi|4758450 guanine nucleotide binding protein (G protein), gamma...    54   3e-08
gi|15147246 guanine nucleotide binding protein (G protein), gamm...    52   1e-07
gi|169213736 PREDICTED: similar to hCG1650801 [Homo sapiens]           45   2e-05
gi|169214197 PREDICTED: similar to hCG1650801 [Homo sapiens]           45   2e-05
gi|169213540 PREDICTED: similar to hCG1650801 [Homo sapiens]           45   2e-05
gi|4758448 guanine nucleotide binding protein gamma 11 precursor...    41   2e-04
gi|11386179 guanine nucleotide binding protein (G protein), gamm...    37   0.003
gi|7706567 guanine nucleotide binding protein (G protein), gamma...    28   1.6  
gi|227496489 multiple C2 domains, transmembrane 2 isoform 2 [Hom...    27   3.5  
gi|227496440 multiple C2 domains, transmembrane 2 isoform 1 [Hom...    27   3.5  
gi|227496504 multiple C2 domains, transmembrane 2 isoform 3 [Hom...    27   3.5  

>gi|239750840 PREDICTED: hypothetical protein XP_002347578 [Homo
          sapiens]
          Length = 68

 Score =  136 bits (343), Expect = 3e-33
 Identities = 68/68 (100%), Positives = 68/68 (100%)

Query: 1  MSSGASASALQCLVEQLKLEAGVERINVSQAAAELQQYCMQNACKDALLVGVLAGSNPFW 60
          MSSGASASALQCLVEQLKLEAGVERINVSQAAAELQQYCMQNACKDALLVGVLAGSNPFW
Sbjct: 1  MSSGASASALQCLVEQLKLEAGVERINVSQAAAELQQYCMQNACKDALLVGVLAGSNPFW 60

Query: 61 EPRSCALL 68
          EPRSCALL
Sbjct: 61 EPRSCALL 68


>gi|239745202 PREDICTED: hypothetical protein XP_002343408 [Homo
          sapiens]
          Length = 68

 Score =  136 bits (343), Expect = 3e-33
 Identities = 68/68 (100%), Positives = 68/68 (100%)

Query: 1  MSSGASASALQCLVEQLKLEAGVERINVSQAAAELQQYCMQNACKDALLVGVLAGSNPFW 60
          MSSGASASALQCLVEQLKLEAGVERINVSQAAAELQQYCMQNACKDALLVGVLAGSNPFW
Sbjct: 1  MSSGASASALQCLVEQLKLEAGVERINVSQAAAELQQYCMQNACKDALLVGVLAGSNPFW 60

Query: 61 EPRSCALL 68
          EPRSCALL
Sbjct: 61 EPRSCALL 68


>gi|63055067 guanine nucleotide binding protein (G protein), gamma
          10 [Homo sapiens]
          Length = 68

 Score =  121 bits (304), Expect = 1e-28
 Identities = 64/68 (94%), Positives = 64/68 (94%)

Query: 1  MSSGASASALQCLVEQLKLEAGVERINVSQAAAELQQYCMQNACKDALLVGVLAGSNPFW 60
          MSSGASASALQ LVEQLKLEAGVERI VSQAAAELQQYCMQNACKDALLVGV AGSNPF 
Sbjct: 1  MSSGASASALQRLVEQLKLEAGVERIKVSQAAAELQQYCMQNACKDALLVGVPAGSNPFR 60

Query: 61 EPRSCALL 68
          EPRSCALL
Sbjct: 61 EPRSCALL 68


>gi|21361097 DNAJC25-GNG10 protein [Homo sapiens]
          Length = 153

 Score = 82.4 bits (202), Expect = 7e-17
 Identities = 41/52 (78%), Positives = 43/52 (82%)

Query: 17  LKLEAGVERINVSQAAAELQQYCMQNACKDALLVGVLAGSNPFWEPRSCALL 68
           L +    E + VSQAAAELQQYCMQNACKDALLVGV AGSNPF EPRSCALL
Sbjct: 102 LLVATAYETLKVSQAAAELQQYCMQNACKDALLVGVPAGSNPFREPRSCALL 153


>gi|4885287 guanine nucleotide binding protein (G protein), gamma
          5 [Homo sapiens]
          Length = 68

 Score = 73.2 bits (178), Expect = 4e-14
 Identities = 34/68 (50%), Positives = 51/68 (75%)

Query: 1  MSSGASASALQCLVEQLKLEAGVERINVSQAAAELQQYCMQNACKDALLVGVLAGSNPFW 60
          MS  +S +A++ +V+QL+LEAG+ R+ VSQAAA+L+Q+C+QNA  D LL GV + +NPF 
Sbjct: 1  MSGSSSVAAMKKVVQQLRLEAGLNRVKVSQAAADLKQFCLQNAQHDPLLTGVSSSTNPFR 60

Query: 61 EPRSCALL 68
            + C+ L
Sbjct: 61 PQKVCSFL 68


>gi|32698769 guanine nucleotide binding protein (G protein), gamma
          7 [Homo sapiens]
          Length = 68

 Score = 68.6 bits (166), Expect = 1e-12
 Identities = 34/68 (50%), Positives = 48/68 (70%)

Query: 1  MSSGASASALQCLVEQLKLEAGVERINVSQAAAELQQYCMQNACKDALLVGVLAGSNPFW 60
          MS+  + +  + LVEQL++EAG+ERI VS+AA++L  YC Q+A  D LLVGV A  NPF 
Sbjct: 1  MSATNNIAQARKLVEQLRIEAGIERIKVSKAASDLMSYCEQHARNDPLLVGVPASENPFK 60

Query: 61 EPRSCALL 68
          + + C +L
Sbjct: 61 DKKPCIIL 68


>gi|51036603 G-protein gamma-12 subunit [Homo sapiens]
          Length = 72

 Score = 60.5 bits (145), Expect = 3e-10
 Identities = 26/55 (47%), Positives = 40/55 (72%)

Query: 14 VEQLKLEAGVERINVSQAAAELQQYCMQNACKDALLVGVLAGSNPFWEPRSCALL 68
          V+QL+LEA +ERI VS+A+A+L  YC ++A  D LL+G+    NPF + ++C +L
Sbjct: 18 VQQLRLEASIERIKVSKASADLMSYCEEHARSDPLLIGIPTSENPFKDKKTCIIL 72


>gi|54114974 guanine nucleotide binding protein (G protein), gamma
          2 [Homo sapiens]
          Length = 71

 Score = 60.1 bits (144), Expect = 4e-10
 Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 3/71 (4%)

Query: 1  MSSGASASALQC--LVEQLKLEAGVERINVSQAAAELQQYCMQNACKDALLVGVLAGSNP 58
          M+S  +AS  Q   LVEQLK+EA ++RI VS+AAA+L  YC  +A +D LL  V A  NP
Sbjct: 1  MASNNTASIAQARKLVEQLKMEANIDRIKVSKAAADLMAYCEAHAKEDPLLTPVPASENP 60

Query: 59 FWEPR-SCALL 68
          F E +  CA+L
Sbjct: 61 FREKKFFCAIL 71


>gi|6912394 guanine nucleotide binding protein (G protein), gamma
          3 [Homo sapiens]
          Length = 75

 Score = 57.0 bits (136), Expect = 3e-09
 Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 1/69 (1%)

Query: 1  MSSGASASALQCLVEQLKLEAGVERINVSQAAAELQQYCMQNACKDALLVGVLAGSNPFW 60
          ++S  S    + +VEQLK+EA + RI VS+AAA+L  YC  +AC+D L+  V    NPF 
Sbjct: 7  VNSTMSIGQARKMVEQLKIEASLCRIKVSKAAADLMTYCDAHACEDPLITPVPTSENPFR 66

Query: 61 EPR-SCALL 68
          E +  CALL
Sbjct: 67 EKKFFCALL 75


>gi|148922937 guanine nucleotide binding protein (G protein),
          gamma 4 [Homo sapiens]
          Length = 75

 Score = 53.5 bits (127), Expect = 3e-08
 Identities = 30/68 (44%), Positives = 43/68 (63%), Gaps = 1/68 (1%)

Query: 2  SSGASASALQCLVEQLKLEAGVERINVSQAAAELQQYCMQNACKDALLVGVLAGSNPFWE 61
          +S  S S  +  VEQLK+EA ++R+ VSQAAA+L  YC  +  +D L++ V A  NPF E
Sbjct: 8  NSTTSISQARKAVEQLKMEACMDRVKVSQAAADLLAYCEAHVREDPLIIPVPASENPFRE 67

Query: 62 PR-SCALL 68
           +  C +L
Sbjct: 68 KKFFCTIL 75


>gi|148922892 guanine nucleotide binding protein (G protein),
          gamma 4 [Homo sapiens]
          Length = 75

 Score = 53.5 bits (127), Expect = 3e-08
 Identities = 30/68 (44%), Positives = 43/68 (63%), Gaps = 1/68 (1%)

Query: 2  SSGASASALQCLVEQLKLEAGVERINVSQAAAELQQYCMQNACKDALLVGVLAGSNPFWE 61
          +S  S S  +  VEQLK+EA ++R+ VSQAAA+L  YC  +  +D L++ V A  NPF E
Sbjct: 8  NSTTSISQARKAVEQLKMEACMDRVKVSQAAADLLAYCEAHVREDPLIIPVPASENPFRE 67

Query: 62 PR-SCALL 68
           +  C +L
Sbjct: 68 KKFFCTIL 75


>gi|4758450 guanine nucleotide binding protein (G protein), gamma
          4 [Homo sapiens]
          Length = 75

 Score = 53.5 bits (127), Expect = 3e-08
 Identities = 30/68 (44%), Positives = 43/68 (63%), Gaps = 1/68 (1%)

Query: 2  SSGASASALQCLVEQLKLEAGVERINVSQAAAELQQYCMQNACKDALLVGVLAGSNPFWE 61
          +S  S S  +  VEQLK+EA ++R+ VSQAAA+L  YC  +  +D L++ V A  NPF E
Sbjct: 8  NSTTSISQARKAVEQLKMEACMDRVKVSQAAADLLAYCEAHVREDPLIIPVPASENPFRE 67

Query: 62 PR-SCALL 68
           +  C +L
Sbjct: 68 KKFFCTIL 75


>gi|15147246 guanine nucleotide binding protein (G protein), gamma
          8 [Homo sapiens]
          Length = 70

 Score = 51.6 bits (122), Expect = 1e-07
 Identities = 29/56 (51%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 14 VEQLKLEAGVERINVSQAAAELQQYCMQNACKDALLVGVLAGSNPFWEPR-SCALL 68
          VEQLKLE  ++R+ VSQAAAEL  +C  +A  D L+  V A  NPF + R  C LL
Sbjct: 15 VEQLKLEVNIDRMKVSQAAAELLAFCETHAKDDPLVTPVPAAENPFRDKRLFCVLL 70


>gi|169213736 PREDICTED: similar to hCG1650801 [Homo sapiens]
          Length = 69

 Score = 44.7 bits (104), Expect = 2e-05
 Identities = 22/55 (40%), Positives = 37/55 (67%), Gaps = 3/55 (5%)

Query: 14 VEQLKLEAGVERINVSQAAAELQQYCMQNACKDALLVGVLAGSNPFWEPRSCALL 68
          VEQL++EAG++++ +   AA+L ++C + A  D  LVG+ A +N F E +  A+L
Sbjct: 18 VEQLQMEAGIDQVKM---AADLLKFCTEQAKNDPFLVGIPAATNSFKEKKPYAIL 69


>gi|169214197 PREDICTED: similar to hCG1650801 [Homo sapiens]
          Length = 69

 Score = 44.7 bits (104), Expect = 2e-05
 Identities = 22/55 (40%), Positives = 37/55 (67%), Gaps = 3/55 (5%)

Query: 14 VEQLKLEAGVERINVSQAAAELQQYCMQNACKDALLVGVLAGSNPFWEPRSCALL 68
          VEQL++EAG++++ +   AA+L ++C + A  D  LVG+ A +N F E +  A+L
Sbjct: 18 VEQLQMEAGIDQVKM---AADLLKFCTEQAKNDPFLVGIPAATNSFKEKKPYAIL 69


>gi|169213540 PREDICTED: similar to hCG1650801 [Homo sapiens]
          Length = 69

 Score = 44.7 bits (104), Expect = 2e-05
 Identities = 22/55 (40%), Positives = 37/55 (67%), Gaps = 3/55 (5%)

Query: 14 VEQLKLEAGVERINVSQAAAELQQYCMQNACKDALLVGVLAGSNPFWEPRSCALL 68
          VEQL++EAG++++ +   AA+L ++C + A  D  LVG+ A +N F E +  A+L
Sbjct: 18 VEQLQMEAGIDQVKM---AADLLKFCTEQAKNDPFLVGIPAATNSFKEKKPYAIL 69


>gi|4758448 guanine nucleotide binding protein gamma 11 precursor
          [Homo sapiens]
          Length = 73

 Score = 40.8 bits (94), Expect = 2e-04
 Identities = 20/58 (34%), Positives = 34/58 (58%)

Query: 10 LQCLVEQLKLEAGVERINVSQAAAELQQYCMQNACKDALLVGVLAGSNPFWEPRSCAL 67
          L+  VEQL+ E  ++R  VS+ + E++ Y  + + +D L+ G+    NPF E  SC +
Sbjct: 15 LKMEVEQLRKEVKLQRQQVSKCSEEIKNYIEERSGEDPLVKGIPEDKNPFKEKGSCVI 72


>gi|11386179 guanine nucleotide binding protein (G protein), gamma
          transducing activity polypeptide 1 [Homo sapiens]
          Length = 74

 Score = 37.0 bits (84), Expect = 0.003
 Identities = 19/52 (36%), Positives = 31/52 (59%)

Query: 10 LQCLVEQLKLEAGVERINVSQAAAELQQYCMQNACKDALLVGVLAGSNPFWE 61
          L+  V+QLK E  +ER+ VS+   E++ Y  + + +D L+ G+    NPF E
Sbjct: 15 LKMEVDQLKKEVTLERMLVSKCCEEVRDYVEERSGEDPLVKGIPEDKNPFKE 66


>gi|7706567 guanine nucleotide binding protein (G protein), gamma
          13 [Homo sapiens]
          Length = 67

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 17/55 (30%), Positives = 25/55 (45%)

Query: 14 VEQLKLEAGVERINVSQAAAELQQYCMQNACKDALLVGVLAGSNPFWEPRSCALL 68
          VE LK +   +R   S+   EL ++      KD  L   L  +NP+ E   C +L
Sbjct: 13 VESLKYQLAFQREMASKTIPELLKWIEDGIPKDPFLNPDLMKNNPWVEKGKCTIL 67


>gi|227496489 multiple C2 domains, transmembrane 2 isoform 2 [Homo
           sapiens]
          Length = 823

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 11/27 (40%), Positives = 18/27 (66%)

Query: 27  NVSQAAAELQQYCMQNACKDALLVGVL 53
           ++S+     Q+YC+QN+ KD   VG+L
Sbjct: 485 DLSERKQITQRYCLQNSLKDVKDVGIL 511


>gi|227496440 multiple C2 domains, transmembrane 2 isoform 1 [Homo
           sapiens]
          Length = 878

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 11/27 (40%), Positives = 18/27 (66%)

Query: 27  NVSQAAAELQQYCMQNACKDALLVGVL 53
           ++S+     Q+YC+QN+ KD   VG+L
Sbjct: 485 DLSERKQITQRYCLQNSLKDVKDVGIL 511


>gi|227496504 multiple C2 domains, transmembrane 2 isoform 3 [Homo
          sapiens]
          Length = 306

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 11/27 (40%), Positives = 18/27 (66%)

Query: 27 NVSQAAAELQQYCMQNACKDALLVGVL 53
          ++S+     Q+YC+QN+ KD   VG+L
Sbjct: 73 DLSERKQITQRYCLQNSLKDVKDVGIL 99


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.127    0.372 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,219,853
Number of Sequences: 37866
Number of extensions: 59456
Number of successful extensions: 165
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 140
Number of HSP's gapped (non-prelim): 22
length of query: 68
length of database: 18,247,518
effective HSP length: 41
effective length of query: 27
effective length of database: 16,695,012
effective search space: 450765324
effective search space used: 450765324
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.