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Search of human proteins with 239750790
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239750790 PREDICTED: hypothetical protein XP_002347558 [Homo
sapiens]
(175 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239750790 PREDICTED: hypothetical protein XP_002347558 [Homo ... 375 e-105
gi|239745150 PREDICTED: hypothetical protein XP_002343411 [Homo ... 375 e-105
gi|239745134 PREDICTED: hypothetical protein XP_002343399 [Homo ... 375 e-105
gi|239745119 PREDICTED: hypothetical protein XP_002343397 [Homo ... 375 e-105
gi|239745116 PREDICTED: hypothetical protein XP_002343387 [Homo ... 375 e-105
gi|239756247 PREDICTED: hypothetical protein [Homo sapiens] 361 e-100
gi|4505195 mitogen-activated protein kinase kinase kinase 11 [Ho... 42 3e-04
gi|38201702 telomerase reverse transcriptase isoform 2 [Homo sap... 39 0.002
gi|109633031 telomerase reverse transcriptase isoform 1 [Homo sa... 39 0.002
gi|169216359 PREDICTED: hypothetical protein [Homo sapiens] 37 0.009
gi|169216600 PREDICTED: hypothetical protein [Homo sapiens] 37 0.009
gi|190343021 Sec24-related protein D [Homo sapiens] 37 0.009
gi|21237805 SWI/SNF-related matrix-associated actin-dependent re... 37 0.009
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 36 0.015
gi|153791535 general control of amino acid synthesis 5-like 2 [H... 36 0.019
gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens] 36 0.019
gi|150170729 microtubule associated serine/threonine kinase 3 [H... 35 0.025
gi|18959210 WIRE protein [Homo sapiens] 35 0.025
gi|68563515 keratinocyte proline-rich protein [Homo sapiens] 35 0.025
gi|148237270 hypermethylated in cancer 1 isoform 2 [Homo sapiens] 35 0.033
gi|61676186 hypermethylated in cancer 1 isoform 1 [Homo sapiens] 35 0.033
gi|151108509 Rho GTPase-activating protein RICH2 [Homo sapiens] 35 0.033
gi|115430245 arylhydrocarbon receptor repressor [Homo sapiens] 35 0.043
gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens] 35 0.043
gi|24497589 aristaless related homeobox [Homo sapiens] 35 0.043
gi|208022661 hypothetical protein LOC57701 [Homo sapiens] 34 0.057
gi|187937179 apoptosis-associated tyrosine kinase [Homo sapiens] 34 0.074
gi|163965366 nascent polypeptide-associated complex alpha subuni... 34 0.074
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 33 0.097
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 33 0.097
>gi|239750790 PREDICTED: hypothetical protein XP_002347558 [Homo
sapiens]
Length = 175
Score = 375 bits (964), Expect = e-105
Identities = 175/175 (100%), Positives = 175/175 (100%)
Query: 1 MTRPLPESIRLLRHTGLVPPTPVPLGYPHQSFVSQPHPFSKQPSPCPRQSPQGDFGWVSP 60
MTRPLPESIRLLRHTGLVPPTPVPLGYPHQSFVSQPHPFSKQPSPCPRQSPQGDFGWVSP
Sbjct: 1 MTRPLPESIRLLRHTGLVPPTPVPLGYPHQSFVSQPHPFSKQPSPCPRQSPQGDFGWVSP 60
Query: 61 GASRSITGPSSPAAPSLISLGSLGSHLQGARPHPRQSSLGDFGLVTPGTPCCRLCPPLLL 120
GASRSITGPSSPAAPSLISLGSLGSHLQGARPHPRQSSLGDFGLVTPGTPCCRLCPPLLL
Sbjct: 61 GASRSITGPSSPAAPSLISLGSLGSHLQGARPHPRQSSLGDFGLVTPGTPCCRLCPPLLL 120
Query: 121 PQGRPPWVLCAGVSKELGPNPVLPSPIVEQRLGHGADMVPPPDQEEWNVVMSQST 175
PQGRPPWVLCAGVSKELGPNPVLPSPIVEQRLGHGADMVPPPDQEEWNVVMSQST
Sbjct: 121 PQGRPPWVLCAGVSKELGPNPVLPSPIVEQRLGHGADMVPPPDQEEWNVVMSQST 175
>gi|239745150 PREDICTED: hypothetical protein XP_002343411 [Homo
sapiens]
Length = 175
Score = 375 bits (964), Expect = e-105
Identities = 175/175 (100%), Positives = 175/175 (100%)
Query: 1 MTRPLPESIRLLRHTGLVPPTPVPLGYPHQSFVSQPHPFSKQPSPCPRQSPQGDFGWVSP 60
MTRPLPESIRLLRHTGLVPPTPVPLGYPHQSFVSQPHPFSKQPSPCPRQSPQGDFGWVSP
Sbjct: 1 MTRPLPESIRLLRHTGLVPPTPVPLGYPHQSFVSQPHPFSKQPSPCPRQSPQGDFGWVSP 60
Query: 61 GASRSITGPSSPAAPSLISLGSLGSHLQGARPHPRQSSLGDFGLVTPGTPCCRLCPPLLL 120
GASRSITGPSSPAAPSLISLGSLGSHLQGARPHPRQSSLGDFGLVTPGTPCCRLCPPLLL
Sbjct: 61 GASRSITGPSSPAAPSLISLGSLGSHLQGARPHPRQSSLGDFGLVTPGTPCCRLCPPLLL 120
Query: 121 PQGRPPWVLCAGVSKELGPNPVLPSPIVEQRLGHGADMVPPPDQEEWNVVMSQST 175
PQGRPPWVLCAGVSKELGPNPVLPSPIVEQRLGHGADMVPPPDQEEWNVVMSQST
Sbjct: 121 PQGRPPWVLCAGVSKELGPNPVLPSPIVEQRLGHGADMVPPPDQEEWNVVMSQST 175
>gi|239745134 PREDICTED: hypothetical protein XP_002343399 [Homo
sapiens]
Length = 175
Score = 375 bits (964), Expect = e-105
Identities = 175/175 (100%), Positives = 175/175 (100%)
Query: 1 MTRPLPESIRLLRHTGLVPPTPVPLGYPHQSFVSQPHPFSKQPSPCPRQSPQGDFGWVSP 60
MTRPLPESIRLLRHTGLVPPTPVPLGYPHQSFVSQPHPFSKQPSPCPRQSPQGDFGWVSP
Sbjct: 1 MTRPLPESIRLLRHTGLVPPTPVPLGYPHQSFVSQPHPFSKQPSPCPRQSPQGDFGWVSP 60
Query: 61 GASRSITGPSSPAAPSLISLGSLGSHLQGARPHPRQSSLGDFGLVTPGTPCCRLCPPLLL 120
GASRSITGPSSPAAPSLISLGSLGSHLQGARPHPRQSSLGDFGLVTPGTPCCRLCPPLLL
Sbjct: 61 GASRSITGPSSPAAPSLISLGSLGSHLQGARPHPRQSSLGDFGLVTPGTPCCRLCPPLLL 120
Query: 121 PQGRPPWVLCAGVSKELGPNPVLPSPIVEQRLGHGADMVPPPDQEEWNVVMSQST 175
PQGRPPWVLCAGVSKELGPNPVLPSPIVEQRLGHGADMVPPPDQEEWNVVMSQST
Sbjct: 121 PQGRPPWVLCAGVSKELGPNPVLPSPIVEQRLGHGADMVPPPDQEEWNVVMSQST 175
>gi|239745119 PREDICTED: hypothetical protein XP_002343397 [Homo
sapiens]
Length = 175
Score = 375 bits (964), Expect = e-105
Identities = 175/175 (100%), Positives = 175/175 (100%)
Query: 1 MTRPLPESIRLLRHTGLVPPTPVPLGYPHQSFVSQPHPFSKQPSPCPRQSPQGDFGWVSP 60
MTRPLPESIRLLRHTGLVPPTPVPLGYPHQSFVSQPHPFSKQPSPCPRQSPQGDFGWVSP
Sbjct: 1 MTRPLPESIRLLRHTGLVPPTPVPLGYPHQSFVSQPHPFSKQPSPCPRQSPQGDFGWVSP 60
Query: 61 GASRSITGPSSPAAPSLISLGSLGSHLQGARPHPRQSSLGDFGLVTPGTPCCRLCPPLLL 120
GASRSITGPSSPAAPSLISLGSLGSHLQGARPHPRQSSLGDFGLVTPGTPCCRLCPPLLL
Sbjct: 61 GASRSITGPSSPAAPSLISLGSLGSHLQGARPHPRQSSLGDFGLVTPGTPCCRLCPPLLL 120
Query: 121 PQGRPPWVLCAGVSKELGPNPVLPSPIVEQRLGHGADMVPPPDQEEWNVVMSQST 175
PQGRPPWVLCAGVSKELGPNPVLPSPIVEQRLGHGADMVPPPDQEEWNVVMSQST
Sbjct: 121 PQGRPPWVLCAGVSKELGPNPVLPSPIVEQRLGHGADMVPPPDQEEWNVVMSQST 175
>gi|239745116 PREDICTED: hypothetical protein XP_002343387 [Homo
sapiens]
Length = 175
Score = 375 bits (964), Expect = e-105
Identities = 175/175 (100%), Positives = 175/175 (100%)
Query: 1 MTRPLPESIRLLRHTGLVPPTPVPLGYPHQSFVSQPHPFSKQPSPCPRQSPQGDFGWVSP 60
MTRPLPESIRLLRHTGLVPPTPVPLGYPHQSFVSQPHPFSKQPSPCPRQSPQGDFGWVSP
Sbjct: 1 MTRPLPESIRLLRHTGLVPPTPVPLGYPHQSFVSQPHPFSKQPSPCPRQSPQGDFGWVSP 60
Query: 61 GASRSITGPSSPAAPSLISLGSLGSHLQGARPHPRQSSLGDFGLVTPGTPCCRLCPPLLL 120
GASRSITGPSSPAAPSLISLGSLGSHLQGARPHPRQSSLGDFGLVTPGTPCCRLCPPLLL
Sbjct: 61 GASRSITGPSSPAAPSLISLGSLGSHLQGARPHPRQSSLGDFGLVTPGTPCCRLCPPLLL 120
Query: 121 PQGRPPWVLCAGVSKELGPNPVLPSPIVEQRLGHGADMVPPPDQEEWNVVMSQST 175
PQGRPPWVLCAGVSKELGPNPVLPSPIVEQRLGHGADMVPPPDQEEWNVVMSQST
Sbjct: 121 PQGRPPWVLCAGVSKELGPNPVLPSPIVEQRLGHGADMVPPPDQEEWNVVMSQST 175
>gi|239756247 PREDICTED: hypothetical protein [Homo sapiens]
Length = 175
Score = 361 bits (926), Expect = e-100
Identities = 167/175 (95%), Positives = 169/175 (96%)
Query: 1 MTRPLPESIRLLRHTGLVPPTPVPLGYPHQSFVSQPHPFSKQPSPCPRQSPQGDFGWVSP 60
MTRPLPESIRLLRHTGLVPPTPVP GYPHQSFVSQPHPF KQPSPCPRQSPQGDFGWV+P
Sbjct: 1 MTRPLPESIRLLRHTGLVPPTPVPXGYPHQSFVSQPHPFRKQPSPCPRQSPQGDFGWVTP 60
Query: 61 GASRSITGPSSPAAPSLISLGSLGSHLQGARPHPRQSSLGDFGLVTPGTPCCRLCPPLLL 120
GASRS+TGPSSPAAPSLISLGSLGSHL GARPHPRQSSLGDFGLVTPG PCCRLCPPLLL
Sbjct: 61 GASRSVTGPSSPAAPSLISLGSLGSHLXGARPHPRQSSLGDFGLVTPGAPCCRLCPPLLL 120
Query: 121 PQGRPPWVLCAGVSKELGPNPVLPSPIVEQRLGHGADMVPPPDQEEWNVVMSQST 175
PQGRPPWVLCAGVSKELGPNPVLPSPIVEQRL HGADMVPPPDQEEWNVVMSQ T
Sbjct: 121 PQGRPPWVLCAGVSKELGPNPVLPSPIVEQRLRHGADMVPPPDQEEWNVVMSQPT 175
>gi|4505195 mitogen-activated protein kinase kinase kinase 11 [Homo
sapiens]
Length = 847
Score = 42.0 bits (97), Expect = 3e-04
Identities = 32/111 (28%), Positives = 46/111 (41%), Gaps = 11/111 (9%)
Query: 19 PPTPVPLGYPHQSFVSQPHPFSKQPSPCPRQSPQGDFGWVSPGASRSITGPSSPAAPSLI 78
PPTP PL + P ++ + PR+ + G VSP S + P +P P
Sbjct: 706 PPTPAPL------LLDLGIPVGQRSAKSPRREEEPRGGTVSPPPGTSRSAPGTPGTPRSP 759
Query: 79 SLGSLGSHLQGARPHPRQSSLGDFGLVTPGTPCCRLCPPLLLPQGRPPWVL 129
LG + RP P +S + + V+ G L P P+ R PW L
Sbjct: 760 PLGLISR----PRPSPLRSRIDPWSFVSAGPRPSPLPSPQPAPR-RAPWTL 805
Score = 37.7 bits (86), Expect = 0.005
Identities = 49/165 (29%), Positives = 60/165 (36%), Gaps = 34/165 (20%)
Query: 3 RPLPESIRLLRHTGLVPPTPVPLGYPHQSFVSQPHPFSKQPSPCPRQSPQGDFGWVSPGA 62
R L LL GL P G + S P + P+PCP + P SP
Sbjct: 643 RALLRGTALLASLGLGRDLQPPGGPGRERGESPTTPPTPTPAPCPTEPPP------SPLI 696
Query: 63 SRSITGPSSP--AAPSLISLGSLGSHLQGARPHPRQSSLGDFGLVT---------PGTPC 111
S+ P SP AP L+ LG P + G G V+ PGTP
Sbjct: 697 CFSLKTPDSPPTPAPLLLDLGIPVGQRSAKSPRREEEPRG--GTVSPPPGTSRSAPGTPG 754
Query: 112 CRLCPPL-LLPQGRP--------PWVLCAGVSKELGPNP-VLPSP 146
PPL L+ + RP PW + GP P LPSP
Sbjct: 755 TPRSPPLGLISRPRPSPLRSRIDPWSFVSA-----GPRPSPLPSP 794
>gi|38201702 telomerase reverse transcriptase isoform 2 [Homo
sapiens]
Length = 1120
Score = 38.9 bits (89), Expect = 0.002
Identities = 43/149 (28%), Positives = 60/149 (40%), Gaps = 21/149 (14%)
Query: 12 LRHTGLVPPTPVPLGYPHQSFVSQPHPFSKQP----SPCPRQSPQGDFGWVSPGASRSIT 67
+R G+ P P S+ P K+P +P P ++P G W PG +R
Sbjct: 207 VREAGVPLGLPAPGARRRGGSASRSLPLPKRPRRGAAPEPERTPVGQGSWAHPGRTR--- 263
Query: 68 GPS-------SPAAPSLISLGSLGSHLQGAR-PHP---RQSSLGDFGLVTPGTPCCRLCP 116
GPS SPA P+ SL L G R HP RQ G P P CP
Sbjct: 264 GPSDRGFCVVSPARPA-EEATSLEGALSGTRHSHPSVGRQHHAGPPSTSRPPRPWDTPCP 322
Query: 117 PLLLPQGRPPWVLCAGVSKELGPNPVLPS 145
P+ ++ +G ++L P+ +L S
Sbjct: 323 PVYAETKH--FLYSSGDKEQLRPSFLLSS 349
>gi|109633031 telomerase reverse transcriptase isoform 1 [Homo
sapiens]
Length = 1132
Score = 38.9 bits (89), Expect = 0.002
Identities = 43/149 (28%), Positives = 60/149 (40%), Gaps = 21/149 (14%)
Query: 12 LRHTGLVPPTPVPLGYPHQSFVSQPHPFSKQP----SPCPRQSPQGDFGWVSPGASRSIT 67
+R G+ P P S+ P K+P +P P ++P G W PG +R
Sbjct: 207 VREAGVPLGLPAPGARRRGGSASRSLPLPKRPRRGAAPEPERTPVGQGSWAHPGRTR--- 263
Query: 68 GPS-------SPAAPSLISLGSLGSHLQGAR-PHP---RQSSLGDFGLVTPGTPCCRLCP 116
GPS SPA P+ SL L G R HP RQ G P P CP
Sbjct: 264 GPSDRGFCVVSPARPA-EEATSLEGALSGTRHSHPSVGRQHHAGPPSTSRPPRPWDTPCP 322
Query: 117 PLLLPQGRPPWVLCAGVSKELGPNPVLPS 145
P+ ++ +G ++L P+ +L S
Sbjct: 323 PVYAETKH--FLYSSGDKEQLRPSFLLSS 349
>gi|169216359 PREDICTED: hypothetical protein [Homo sapiens]
Length = 225
Score = 37.0 bits (84), Expect = 0.009
Identities = 29/82 (35%), Positives = 36/82 (43%), Gaps = 11/82 (13%)
Query: 11 LLRHTGLVPPTPVPLGYPH---------QSFVSQPHPFSKQPSP-CPRQSPQGDFGWVSP 60
L R+ PP P P P S PHP ++P+P R P G GWVS
Sbjct: 77 LQRNASEDPPPPGPFRAPSPGSPRCQRPASPAPHPHPTLERPAPRGVRCFPAGTRGWVSI 136
Query: 61 GASRSITGPSSPAAPSLISLGS 82
S P +PAAP+ SLG+
Sbjct: 137 ALGGS-AAPGNPAAPASPSLGA 157
>gi|169216600 PREDICTED: hypothetical protein [Homo sapiens]
Length = 225
Score = 37.0 bits (84), Expect = 0.009
Identities = 29/82 (35%), Positives = 36/82 (43%), Gaps = 11/82 (13%)
Query: 11 LLRHTGLVPPTPVPLGYPH---------QSFVSQPHPFSKQPSP-CPRQSPQGDFGWVSP 60
L R+ PP P P P S PHP ++P+P R P G GWVS
Sbjct: 77 LQRNASEDPPPPGPFRAPSPGSPRCQRPASPAPHPHPTLERPAPRGVRCFPAGTRGWVSI 136
Query: 61 GASRSITGPSSPAAPSLISLGS 82
S P +PAAP+ SLG+
Sbjct: 137 ALGGS-AAPGNPAAPASPSLGA 157
>gi|190343021 Sec24-related protein D [Homo sapiens]
Length = 1032
Score = 37.0 bits (84), Expect = 0.009
Identities = 49/176 (27%), Positives = 64/176 (36%), Gaps = 33/176 (18%)
Query: 16 GLVPPTPVPLGYPHQ----SFVSQPHPFSKQPSPCPRQSPQGDFGWVSPGASRSITGPSS 71
G++PP P P G PHQ + HP + P P P + P A S GP S
Sbjct: 55 GMLPPGPPPPG-PHQFGQNGAHATGHPPQRFPGPPPVNNVASSHAPYQPSAQSSYPGPIS 113
Query: 72 PAA----PSLISLGSLGSHLQGARPHPRQSSLGDFGLVTPGTPCCRLCPPLLLPQGR--- 124
++ S +S + S+ G P P Q G + TP P +L P +
Sbjct: 114 TSSVTQLGSQLSAMQINSYGSGMAP-PSQGPPGPLSATSLQTPPRPPQPSILQPGSQVLP 172
Query: 125 -PPWVLCAGVSKEL-----------GPNP----VLPSPIVEQRLGHGADMVPPPDQ 164
PP L + L GP P P P+ Q LG G PP Q
Sbjct: 173 PPPTTLNGPGASPLPLPMYRPDGLSGPPPPNAQYQPPPLPGQTLGAGY----PPQQ 224
>gi|21237805 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform a [Homo sapiens]
Length = 1214
Score = 37.0 bits (84), Expect = 0.009
Identities = 28/81 (34%), Positives = 32/81 (39%), Gaps = 3/81 (3%)
Query: 16 GLVPPTPVPLGYPH--QSFVSQPHPFSKQPSPCPRQSPQGDFGWVSPGASRSITGPSSPA 73
G VPP P G PH F +Q P S P P G G G + P P
Sbjct: 1034 GAVPPGVPPPG-PHGPSPFPNQQTPPSMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPPP 1092
Query: 74 APSLISLGSLGSHLQGARPHP 94
APS+I GSL + P P
Sbjct: 1093 APSIIPFGSLADSISINLPAP 1113
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 36.2 bits (82), Expect = 0.015
Identities = 35/120 (29%), Positives = 42/120 (35%), Gaps = 14/120 (11%)
Query: 43 PSPCPRQSPQGDFGWVSPGASRSITGPSSPAAPSLISLGSLGSHLQGARPHPRQSSLGDF 102
P+PCP Q+P P SI P A P+L S LQG P L
Sbjct: 564 PAPCPLQAPPSPLTTPPPETPSSIATPPPQAPPALAS-----PPLQGLPSPP----LSPL 614
Query: 103 GLVTPGTPCCRLCPPLLLPQGRPPWVLCAGVSKELGPNPVLPSPIVEQRLGHGADMVPPP 162
P P PPL P P +S P+P P+ + L A PPP
Sbjct: 615 ATPPPQAPPXLALPPLQAPPSPP---ASPPLSPLATPSPQAPNALAVHLL--QAPFSPPP 669
Score = 28.1 bits (61), Expect = 4.1
Identities = 43/160 (26%), Positives = 56/160 (35%), Gaps = 23/160 (14%)
Query: 18 VPPTPVPLGYPHQSFVSQPH---------PFSKQPSPCPRQSPQGDFGWVSPGASRSITG 68
VPP+P P P + P P PSP P P +SP A
Sbjct: 737 VPPSP-PASPPMSPSATPPPRVPPLLAAPPLQVPPSP-PASLP------MSPLAKPPPQA 788
Query: 69 PSSPAAPSLISLGSLGSHLQGARPHPRQSSLGDFGLVT--PGTPCCRLCPPLLLPQGRP- 125
P + A P L +L S + G P +SL L T P P P L +P P
Sbjct: 789 PPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPA 848
Query: 126 -PWVLCAGVSKELGPNPVLPSPIVEQRLGHGADMVPPPDQ 164
P + GP+ + P + L G PPP +
Sbjct: 849 SPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPP--PPPSR 886
Score = 27.7 bits (60), Expect = 5.3
Identities = 37/109 (33%), Positives = 40/109 (36%), Gaps = 16/109 (14%)
Query: 19 PPTPVPLGYPHQSFVSQPHPFSKQPSPCPRQSPQGDFGWVSPGASRSITGPSSPAAPSLI 78
PP PL P S P S P+ P SP + P + S SP AP
Sbjct: 451 PPDSPPLQAPLSLPASPPLQTSLSPAVSPLSSPL----TIHPLQALSSLASHSPQAP--- 503
Query: 79 SLGSLGSHLQGARPHPRQSSLGDFGLVTPGTPCCRLCPPL-LLPQGRPP 126
L SL P QSSL L TP P PPL LP PP
Sbjct: 504 -LSSL-----IMPPLETQSSLAPPSLQTP--PASLTTPPLENLPSLAPP 544
Score = 26.9 bits (58), Expect = 9.0
Identities = 35/133 (26%), Positives = 45/133 (33%), Gaps = 29/133 (21%)
Query: 19 PP--TPVPLGYPHQSFVSQPHPFSKQPSPCPRQSPQG----------DFGWVSP-GASRS 65
PP TP+PL P S P+ P Q+P + P S
Sbjct: 335 PPLATPLPLAPPSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHS 394
Query: 66 ITGPSSPAAPSLISLGSLGSHLQGARP-----------HPRQSSLGDFGLVTPGTPCCRL 114
+T PS A PS ++L SL + P PRQ+ L +P P
Sbjct: 395 LTSPSLQAPPSPLALSSLQATTSLGSPTLQATHSFLTMSPRQTQA---SLTSPSRPASTP 451
Query: 115 --CPPLLLPQGRP 125
PPL P P
Sbjct: 452 PDSPPLQAPLSLP 464
>gi|153791535 general control of amino acid synthesis 5-like 2 [Homo
sapiens]
Length = 837
Score = 35.8 bits (81), Expect = 0.019
Identities = 25/86 (29%), Positives = 30/86 (34%), Gaps = 4/86 (4%)
Query: 20 PTPVPLGYPHQSFVSQPHPFSKQPSPCPRQSPQGDFGWVSPGASRSITGP-SSPAAPSLI 78
PTP P P + + P P P+P P +P G G PG G PA P L
Sbjct: 26 PTPTPAPSPASAPIPTPTP---APAPAPAAAPAGSTGTGGPGVGSGGAGSGGDPARPGLS 82
Query: 79 SLGSLGSHLQGARPHPRQSSLGDFGL 104
R PR L G+
Sbjct: 83 QQQRASQRKAQVRGLPRAKKLEKLGV 108
>gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens]
Length = 703
Score = 35.8 bits (81), Expect = 0.019
Identities = 45/141 (31%), Positives = 52/141 (36%), Gaps = 18/141 (12%)
Query: 16 GLVPPTPVPL-GYPHQSFVSQPHPFSKQPSPCPRQSPQGDFGWVS---------PGASRS 65
GL P+ + + G P V P F +P P P GD G PGA
Sbjct: 162 GLPGPSGITIPGKPGAQGVPGPPGFQGEPGPQGEPGPPGDRGLKGDNGVGQPGLPGAPGQ 221
Query: 66 ITGPSSPAAPSLISLGSLGSHLQGARPHPRQSSLGDFGLVTPGTPCCRLCPPLLLPQGRP 125
P P P LG G L G P G+ G PG P R P + P+G P
Sbjct: 222 GGAPGPPGLPGPAGLGKPG--LDGLPGAP--GDKGESG--PPGVPGPRGEPGAVGPKG-P 274
Query: 126 PWVLCAGVSKELG-PNPVLPS 145
P V GV G P P PS
Sbjct: 275 PGVDGVGVPGAAGLPGPQGPS 295
>gi|150170729 microtubule associated serine/threonine kinase 3 [Homo
sapiens]
Length = 1309
Score = 35.4 bits (80), Expect = 0.025
Identities = 37/127 (29%), Positives = 47/127 (37%), Gaps = 13/127 (10%)
Query: 34 SQPHPFSKQPS-PCPRQSPQ--GDFGWVSPGASRSITGPSSPAAPSLISLGSLGSHLQGA 90
S H S P+ PC +P D P AS S + P+SPAA SL H A
Sbjct: 1109 SPTHSLSPSPTTPCRSPAPDVPADTTASPPSASPSSSSPASPAAAGHTRPSSL--HGLAA 1166
Query: 91 RPHPRQSSLGDFGLVTPGTPCCRLCPPLLLPQGRPPWVLCAGVSKELGPNPVLPSPIVEQ 150
+ P + G + P CPP+ P R P L +P P+
Sbjct: 1167 KLGPPRPKTGRRKSTSSIPPSPLACPPISAPPPRSP--------SPLPGHPPAPARSPRL 1218
Query: 151 RLGHGAD 157
R G AD
Sbjct: 1219 RRGQSAD 1225
>gi|18959210 WIRE protein [Homo sapiens]
Length = 440
Score = 35.4 bits (80), Expect = 0.025
Identities = 44/150 (29%), Positives = 53/150 (35%), Gaps = 21/150 (14%)
Query: 18 VPPTPVPLGYPHQSFVSQPHPFSKQPSPCP-RQSPQGDFGWVSPGASRS----ITGPSSP 72
+PPTP +P + P P PSP R P G P R GPSSP
Sbjct: 209 LPPTPGQRLHPGREGPPAPPPVKPPPSPVNIRTGPSGQSLAPPPPPYRQPPGVPNGPSSP 268
Query: 73 AAPSLISLGSLGSHLQGARPHPRQSSLGDFGLVTPGTPCCRLCPPLLLPQGRPPWVLCAG 132
S L + L P P + GL P P P LL + PP A
Sbjct: 269 TNESAPELPQRHNSLHRKTPGPVR------GLAPP--PPTSASPSLLSNRPPPP----AR 316
Query: 133 VSKELGPNPVLPSPIVEQRLGHGADMVPPP 162
G P P P++ +GA PPP
Sbjct: 317 DPPSRGAAPPPPPPVIR----NGARDAPPP 342
>gi|68563515 keratinocyte proline-rich protein [Homo sapiens]
Length = 579
Score = 35.4 bits (80), Expect = 0.025
Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 7/49 (14%)
Query: 6 PESIRLLRHTGLVPPTPVPLGYPHQSFVSQPHPF---SKQPSPCPRQSP 51
PE + LR T P PVPL P Q + +P P + P PCPR P
Sbjct: 434 PEPLPALRPT----PRPVPLPRPGQCEIPEPRPCLQPCEHPEPCPRPEP 478
>gi|148237270 hypermethylated in cancer 1 isoform 2 [Homo sapiens]
Length = 733
Score = 35.0 bits (79), Expect = 0.033
Identities = 37/117 (31%), Positives = 41/117 (35%), Gaps = 20/117 (17%)
Query: 19 PPTPVPLGYPHQSFVSQ---PHPFSKQPSPCPRQSP-QGDFGWVSPGASRSITGPSSPAA 74
PP+ P Y P PF K P P +G G SPG P P
Sbjct: 271 PPSAGPAAYKEPPLALPSLPPLPFQKLEEAAPPSDPFRGGSG--SPGPEP----PGRPDG 324
Query: 75 PSLI--------SLGSLGSHLQGAR--PHPRQSSLGDFGLVTPGTPCCRLCPPLLLP 121
PSL+ LGS G L R P R G V+PG P L PP P
Sbjct: 325 PSLLYRWMKHEPGLGSYGDELGRERGSPSERCEERGGDAAVSPGGPPLGLAPPPRYP 381
>gi|61676186 hypermethylated in cancer 1 isoform 1 [Homo sapiens]
Length = 714
Score = 35.0 bits (79), Expect = 0.033
Identities = 37/117 (31%), Positives = 41/117 (35%), Gaps = 20/117 (17%)
Query: 19 PPTPVPLGYPHQSFVSQ---PHPFSKQPSPCPRQSP-QGDFGWVSPGASRSITGPSSPAA 74
PP+ P Y P PF K P P +G G SPG P P
Sbjct: 252 PPSAGPAAYKEPPLALPSLPPLPFQKLEEAAPPSDPFRGGSG--SPGPEP----PGRPDG 305
Query: 75 PSLI--------SLGSLGSHLQGAR--PHPRQSSLGDFGLVTPGTPCCRLCPPLLLP 121
PSL+ LGS G L R P R G V+PG P L PP P
Sbjct: 306 PSLLYRWMKHEPGLGSYGDELGRERGSPSERCEERGGDAAVSPGGPPLGLAPPPRYP 362
>gi|151108509 Rho GTPase-activating protein RICH2 [Homo sapiens]
Length = 818
Score = 35.0 bits (79), Expect = 0.033
Identities = 30/94 (31%), Positives = 38/94 (40%), Gaps = 7/94 (7%)
Query: 6 PESIRLLRHTGLVPPTPVPLGYPH---QSFVSQPHPFSKQPSPCPRQSPQGDFGWVSPGA 62
P ++R + P VP G P QP P S P+P SP +G P
Sbjct: 641 PHTLRKVSKKLAPIPPKVPFGQPGAMADQSAGQPSPVSLSPTPPSTPSP---YGLSYPQG 697
Query: 63 SRSITGPSSP-AAPSLISLGSLGSHLQGARPHPR 95
+G SP AAP L S S L +RP P+
Sbjct: 698 YSLASGQLSPAAAPPLASPSVFTSTLSKSRPTPK 731
Score = 32.3 bits (72), Expect = 0.22
Identities = 41/132 (31%), Positives = 50/132 (37%), Gaps = 13/132 (9%)
Query: 13 RHTGLVPPTPVPLGYPHQSFVSQPHPFSKQP--SP-CPRQSPQGDFGWVSPGASRSITGP 69
R PP+ P P + P P +QP SP P SP G G + PG R+ T
Sbjct: 534 RKVSCAPPSMQPPAPPAELAAPLPSPLPEQPLDSPAAPALSPSG-LG-LQPGPERTSTTK 591
Query: 70 SSPAAPSLISLGSLGSHLQGARPHPRQSSLGDFGLVTPGTPCCRLCPPLLLPQGRPPWVL 129
S +P GS GS QG + G PG P P + P L
Sbjct: 592 SKELSPGSAQKGSPGSS-QGT------ACAGTQPGAQPGAQPGASPSPSQPPADQSPHTL 644
Query: 130 CAGVSKELGPNP 141
VSK+L P P
Sbjct: 645 -RKVSKKLAPIP 655
>gi|115430245 arylhydrocarbon receptor repressor [Homo sapiens]
Length = 719
Score = 34.7 bits (78), Expect = 0.043
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 70 SSPAAPSLISLGSLGSHLQGARPHPRQSSLGDFGLVTPGTP--CCRLCPPLLLPQGRPPW 127
+ P + + + LG ++GA+PH R ++ G +TP P C L P LPQ PP
Sbjct: 596 TEPDSRQQVYISHLGHGVRGAQPHGRATA-GRSRELTPFHPAHCACLEPTDGLPQSEPPH 654
Query: 128 VLCA 131
LCA
Sbjct: 655 QLCA 658
>gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]
Length = 1682
Score = 34.7 bits (78), Expect = 0.043
Identities = 42/161 (26%), Positives = 54/161 (33%), Gaps = 41/161 (25%)
Query: 14 HTGLVPPTPVPLGYPHQSFVSQPHPFSKQPSPCPR-QSPQGDFGWVSPGASRS------- 65
H+ P P PH S P P S P PCPR P W+ A R+
Sbjct: 443 HSSRKPFLGAPAATPHLSL--PPGPSSPPPPPCPRLLRPPPPPAWLKGPACRAAREDGEI 500
Query: 66 -------ITGPSSPAAPSL-------------ISLGSLGSHLQGARPHPRQSSLGDFGLV 105
GP PA P L S+G+ SH P P SS
Sbjct: 501 LEELFFGTEGPPRPAPPPLPHREGFLGPPASRFSVGTQDSHTPPTPPTPTTSSSNS---- 556
Query: 106 TPGTPCCRLCPPLLLPQGRPPWVLCAGVSKELGPNPVLPSP 146
G+ P+ P PP+ +++ + P P PSP
Sbjct: 557 NSGSHSSSPAGPVSFPP--PPY-----LARSIDPLPRPPSP 590
>gi|24497589 aristaless related homeobox [Homo sapiens]
Length = 562
Score = 34.7 bits (78), Expect = 0.043
Identities = 22/66 (33%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
Query: 24 PLGYPHQSFVSQPHPFSK--QPSPCPRQSPQGDFGWVSPGASRSITGPSSPAAPSLISLG 81
P G P +S HP S SP P P D W + A+ + PS P P SL
Sbjct: 395 PPGLPFPGPLSATHPLSPYLDASPFPPHHPALDSAWTAAAAAAAAAFPSLPPPPGSASLP 454
Query: 82 SLGSHL 87
G+ L
Sbjct: 455 PSGAPL 460
>gi|208022661 hypothetical protein LOC57701 [Homo sapiens]
Length = 1334
Score = 34.3 bits (77), Expect = 0.057
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 1 MTRPLPESIRLLRHTGLVPPTP-VPLGYPHQSFVSQPHPFSKQPSPCP-RQSPQGDFGWV 58
+T +P++ +LR G VPP+P +P YP+ S + + SP P R++P
Sbjct: 587 LTLEVPQAPEVLRSPG-VPPSPCLPESYPYGSPQEKSLDKAGSESPHPGRRTPGNSSKKP 645
Query: 59 SPGASRSITGP-SSPAAPSLISLGSLGSHLQGA 90
S G+ R P S+P L +LG L + +GA
Sbjct: 646 SQGSGRRPGDPGSTPLRDRLAALGKLKTGPEGA 678
>gi|187937179 apoptosis-associated tyrosine kinase [Homo sapiens]
Length = 1374
Score = 33.9 bits (76), Expect = 0.074
Identities = 27/97 (27%), Positives = 39/97 (40%), Gaps = 13/97 (13%)
Query: 15 TGLVPPTPVPLGYPH----------QSFVSQPHPFSKQPSPCPRQSPQGDFGWVSPGASR 64
+GLVP P P G Q F+ P P + + Q P G P +
Sbjct: 1074 SGLVPEPPEPQGPAKVRPGPSPSCSQFFLLTPVPLRSEGNSSEFQGPPGLLS--GPAPQK 1131
Query: 65 SITGPSSPAAPSLISLGSLGSHLQGARPHPRQSSLGD 101
+ GP +P AP ++L L + L+G RP + D
Sbjct: 1132 RMGGPGTPRAPLRLALPGLPAALEG-RPEEEEEDSED 1167
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 33.9 bits (76), Expect = 0.074
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 4 PLPESIRLLRHTGLVPPTPVPLGYPHQSFVSQPHPFSKQPSPCPRQSPQGDFGWVSPGAS 63
P P ++ L G+ P P P S V+ P P +P P+Q+P SP +
Sbjct: 865 PTPSAVTPLSPKGVTLP---PKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKA 921
Query: 64 RSITGPSS-PAAPS 76
R+ P PA+PS
Sbjct: 922 RATPAPKGIPASPS 935
Score = 30.0 bits (66), Expect = 1.1
Identities = 20/76 (26%), Positives = 30/76 (39%), Gaps = 7/76 (9%)
Query: 1 MTRPLPESIRLLRHTGLVPPTPVPLGYPHQSFVSQPHPFSKQPSPCPRQSPQGDFGWVSP 60
MT P+ R +P +P P G P + P P +P P+ +P +P
Sbjct: 913 MTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAP-------TP 965
Query: 61 GASRSITGPSSPAAPS 76
A+ + PA PS
Sbjct: 966 PAATPPSPKGGPATPS 981
Score = 28.9 bits (63), Expect = 2.4
Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 5/56 (8%)
Query: 19 PPTPVPLGYPHQSFVSQPHPFSKQPSPCPRQSPQGDFGWVSPGASRSITGPSSPAA 74
P TP P G P V+ P P P S +G P S GP+ PAA
Sbjct: 1324 PGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKG-----GPTTPSSKEGPTPPAA 1374
Score = 27.7 bits (60), Expect = 5.3
Identities = 34/166 (20%), Positives = 56/166 (33%), Gaps = 23/166 (13%)
Query: 4 PLPESIRLLRHTGLVPPTPVPLGYPHQSFVSQPHPFSKQPSPCPRQSPQGDFGWVSPGAS 63
P P+ + P TP P+G P V P +P R+ P + +
Sbjct: 1479 PAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKT 1538
Query: 64 RSITGPSSPAAPSLISLGSLGSHLQGARPHPRQSSLGDFGLVTPGTPCCR--LCPPLLLP 121
+ P P +++ P P+++ P TP + PP + P
Sbjct: 1539 PATLAPKEALIPPAMTV-----------PSPKKTPAIPTPKEAPATPSSKEASSPPAVTP 1587
Query: 122 ---QGRPPWVLCAGVSKELGPNPVLPSPIVEQRLGHGADMVPPPDQ 164
+G P KEL P + SP ++ A P P++
Sbjct: 1588 STYKGAPS-------PKELLIPPAVTSPSPKEAPTPPAVTPPSPEK 1626
Score = 26.9 bits (58), Expect = 9.0
Identities = 27/101 (26%), Positives = 36/101 (35%), Gaps = 12/101 (11%)
Query: 19 PPTPVPLGYPHQSFVSQPHPFSKQPSPCPRQSPQGDFGWVSPGASRSITGPSSPAAPSLI 78
P TP P G P + P P +P P+ +P +P A +T PS +P+
Sbjct: 977 PATPSPKGAPTPPAATPPSPKGGPATPSPKGAP-------TPPA---VTPPSPKGSPAAT 1026
Query: 79 SLGSLGSHLQGARPHPRQSSLGDFGLV--TPGTPCCRLCPP 117
S A P + S L P TP L P
Sbjct: 1027 PFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSP 1067
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 33.5 bits (75), Expect = 0.097
Identities = 50/180 (27%), Positives = 58/180 (32%), Gaps = 35/180 (19%)
Query: 4 PLPESIRLLRHTGLVPPTPVPLGYPHQSFVSQPHPFSKQPSPCPRQSPQGDFGWVSPGAS 63
P P R H VPP P P +P S+ P P P S G P
Sbjct: 268 PPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGP----PPLPP 323
Query: 64 RSITGPSSPAAPSL-ISLGSLGSHLQGARPHPRQSSLGDFGLVTPGTPCCRLCPPLLLPQ 122
S +P P +SL S L P P +S P P R PP+ P
Sbjct: 324 SSSGNDETPRLPQRNLSLSSSTPPL----PSPGRSG------PLPPPPSERPPPPVRDPP 373
Query: 123 GR-------PPWVLCAGVSKELGPNPVLPS-------------PIVEQRLGHGADMVPPP 162
GR PP S+ L P LPS P+ R GA PPP
Sbjct: 374 GRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPPPPP 433
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 33.5 bits (75), Expect = 0.097
Identities = 50/180 (27%), Positives = 58/180 (32%), Gaps = 35/180 (19%)
Query: 4 PLPESIRLLRHTGLVPPTPVPLGYPHQSFVSQPHPFSKQPSPCPRQSPQGDFGWVSPGAS 63
P P R H VPP P P +P S+ P P P S G P
Sbjct: 268 PPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGP----PPLPP 323
Query: 64 RSITGPSSPAAPSL-ISLGSLGSHLQGARPHPRQSSLGDFGLVTPGTPCCRLCPPLLLPQ 122
S +P P +SL S L P P +S P P R PP+ P
Sbjct: 324 SSSGNDETPRLPQRNLSLSSSTPPL----PSPGRSG------PLPPPPSERPPPPVRDPP 373
Query: 123 GR-------PPWVLCAGVSKELGPNPVLPS-------------PIVEQRLGHGADMVPPP 162
GR PP S+ L P LPS P+ R GA PPP
Sbjct: 374 GRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPPPPP 433
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.138 0.455
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,955,381
Number of Sequences: 37866
Number of extensions: 776118
Number of successful extensions: 3380
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 351
Number of HSP's that attempted gapping in prelim test: 3076
Number of HSP's gapped (non-prelim): 691
length of query: 175
length of database: 18,247,518
effective HSP length: 95
effective length of query: 80
effective length of database: 14,650,248
effective search space: 1172019840
effective search space used: 1172019840
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.