Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239750739
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239750739 PREDICTED: hypothetical protein XP_002347520 [Homo
sapiens]
(149 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239750739 PREDICTED: hypothetical protein XP_002347520 [Homo ... 305 9e-84
gi|239756205 PREDICTED: similar to hCG2029977 [Homo sapiens] 264 2e-71
gi|239756231 PREDICTED: similar to hCG1812074 [Homo sapiens] 258 1e-69
gi|239756229 PREDICTED: similar to hCG1812074 [Homo sapiens] 258 1e-69
gi|239750771 PREDICTED: similar to hCG1812074 [Homo sapiens] 258 1e-69
gi|169208448 PREDICTED: similar to hCG1812074 [Homo sapiens] 256 6e-69
gi|239750741 PREDICTED: hypothetical protein XP_002347521 [Homo ... 126 8e-30
gi|239750767 PREDICTED: hypothetical protein XP_002347529 [Homo ... 123 7e-29
gi|239750743 PREDICTED: hypothetical protein XP_002347522 [Homo ... 123 7e-29
gi|239758119 PREDICTED: similar to hCG2042717 [Homo sapiens] 120 6e-28
gi|239756213 PREDICTED: similar to hCG2042717 [Homo sapiens] 117 3e-27
gi|239750755 PREDICTED: hypothetical protein XP_002347525 [Homo ... 117 3e-27
gi|239745538 PREDICTED: similar to Ig heavy chain [Homo sapiens] 117 3e-27
gi|239752583 PREDICTED: hypothetical protein XP_002348171 [Homo ... 116 8e-27
gi|239750748 PREDICTED: hypothetical protein XP_002347523 [Homo ... 116 8e-27
gi|239745544 PREDICTED: hypothetical protein XP_002343513 [Homo ... 116 8e-27
gi|169207532 PREDICTED: similar to hCG2042717 [Homo sapiens] 115 1e-26
gi|239745542 PREDICTED: similar to hCG1793095 [Homo sapiens] 115 1e-26
gi|239745527 PREDICTED: hypothetical protein XP_002343511 [Homo ... 115 1e-26
gi|169217837 PREDICTED: similar to hCG1773549 [Homo sapiens] 110 3e-25
gi|239758153 PREDICTED: similar to Ig heavy chain [Homo sapiens] 110 4e-25
gi|239756221 PREDICTED: similar to hCG2003024 [Homo sapiens] 108 1e-24
gi|239750773 PREDICTED: similar to hCG2003024 [Homo sapiens] 108 1e-24
gi|239750763 PREDICTED: hypothetical protein XP_002347527 [Homo ... 107 3e-24
gi|239745042 PREDICTED: similar to hCG2003024 [Homo sapiens] 107 3e-24
gi|239756211 PREDICTED: similar to pre-B lymphocyte gene 2 [Homo... 103 4e-23
gi|239750752 PREDICTED: hypothetical protein XP_002347494 [Homo ... 103 4e-23
gi|239756209 PREDICTED: hypothetical protein [Homo sapiens] 102 9e-23
gi|239750750 PREDICTED: hypothetical protein XP_002347524 [Homo ... 102 9e-23
gi|169217835 PREDICTED: similar to hCG2038921 [Homo sapiens] 98 3e-21
>gi|239750739 PREDICTED: hypothetical protein XP_002347520 [Homo
sapiens]
Length = 149
Score = 305 bits (781), Expect = 9e-84
Identities = 149/149 (100%), Positives = 149/149 (100%)
Query: 1 MGLLHKNMKHLWFFLLLVAAPRWVLSQVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNW 60
MGLLHKNMKHLWFFLLLVAAPRWVLSQVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNW
Sbjct: 1 MGLLHKNMKHLWFFLLLVAAPRWVLSQVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNW 60
Query: 61 WSWVRQPPGKGLEWIGEIYHSGSTNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVY 120
WSWVRQPPGKGLEWIGEIYHSGSTNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVY
Sbjct: 61 WSWVRQPPGKGLEWIGEIYHSGSTNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVY 120
Query: 121 YCARDTVRGVFHKVQVLSKASVKIELQFP 149
YCARDTVRGVFHKVQVLSKASVKIELQFP
Sbjct: 121 YCARDTVRGVFHKVQVLSKASVKIELQFP 149
>gi|239756205 PREDICTED: similar to hCG2029977 [Homo sapiens]
Length = 259
Score = 264 bits (674), Expect = 2e-71
Identities = 127/129 (98%), Positives = 128/129 (99%)
Query: 1 MGLLHKNMKHLWFFLLLVAAPRWVLSQVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNW 60
+ LLHKNMKHLWFFLLLVAAPRWVLSQVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNW
Sbjct: 114 LDLLHKNMKHLWFFLLLVAAPRWVLSQVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNW 173
Query: 61 WSWVRQPPGKGLEWIGEIYHSGSTNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVY 120
WSWVRQPPGKGLEWIGEIYHSGSTNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVY
Sbjct: 174 WSWVRQPPGKGLEWIGEIYHSGSTNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVY 233
Query: 121 YCARDTVRG 129
YCARDTVRG
Sbjct: 234 YCARDTVRG 242
>gi|239756231 PREDICTED: similar to hCG1812074 [Homo sapiens]
Length = 222
Score = 258 bits (659), Expect = 1e-69
Identities = 125/129 (96%), Positives = 125/129 (96%)
Query: 1 MGLLHKNMKHLWFFLLLVAAPRWVLSQVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNW 60
M LLHKNMKHLWFFLLLVAAPRWVLSQVQLQESGPGLVKPS TLSLTC VSGGSISSSNW
Sbjct: 1 MDLLHKNMKHLWFFLLLVAAPRWVLSQVQLQESGPGLVKPSETLSLTCVVSGGSISSSNW 60
Query: 61 WSWVRQPPGKGLEWIGEIYHSGSTNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVY 120
WSWVRQPPGKGLEWIGEIYHSGS NYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVY
Sbjct: 61 WSWVRQPPGKGLEWIGEIYHSGSPNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVY 120
Query: 121 YCARDTVRG 129
YCARDTVRG
Sbjct: 121 YCARDTVRG 129
>gi|239756229 PREDICTED: similar to hCG1812074 [Homo sapiens]
Length = 225
Score = 258 bits (659), Expect = 1e-69
Identities = 125/129 (96%), Positives = 125/129 (96%)
Query: 1 MGLLHKNMKHLWFFLLLVAAPRWVLSQVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNW 60
M LLHKNMKHLWFFLLLVAAPRWVLSQVQLQESGPGLVKPS TLSLTC VSGGSISSSNW
Sbjct: 1 MDLLHKNMKHLWFFLLLVAAPRWVLSQVQLQESGPGLVKPSETLSLTCVVSGGSISSSNW 60
Query: 61 WSWVRQPPGKGLEWIGEIYHSGSTNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVY 120
WSWVRQPPGKGLEWIGEIYHSGS NYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVY
Sbjct: 61 WSWVRQPPGKGLEWIGEIYHSGSPNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVY 120
Query: 121 YCARDTVRG 129
YCARDTVRG
Sbjct: 121 YCARDTVRG 129
>gi|239750771 PREDICTED: similar to hCG1812074 [Homo sapiens]
Length = 222
Score = 258 bits (659), Expect = 1e-69
Identities = 125/129 (96%), Positives = 125/129 (96%)
Query: 1 MGLLHKNMKHLWFFLLLVAAPRWVLSQVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNW 60
M LLHKNMKHLWFFLLLVAAPRWVLSQVQLQESGPGLVKPS TLSLTC VSGGSISSSNW
Sbjct: 1 MDLLHKNMKHLWFFLLLVAAPRWVLSQVQLQESGPGLVKPSETLSLTCVVSGGSISSSNW 60
Query: 61 WSWVRQPPGKGLEWIGEIYHSGSTNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVY 120
WSWVRQPPGKGLEWIGEIYHSGS NYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVY
Sbjct: 61 WSWVRQPPGKGLEWIGEIYHSGSPNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVY 120
Query: 121 YCARDTVRG 129
YCARDTVRG
Sbjct: 121 YCARDTVRG 129
>gi|169208448 PREDICTED: similar to hCG1812074 [Homo sapiens]
Length = 277
Score = 256 bits (653), Expect = 6e-69
Identities = 124/129 (96%), Positives = 124/129 (96%)
Query: 1 MGLLHKNMKHLWFFLLLVAAPRWVLSQVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNW 60
M LLHKNMKHLWFFLLLVAAPRWVLSQVQLQESGPGLVKPS TLSLTC VSGGSISSSNW
Sbjct: 1 MDLLHKNMKHLWFFLLLVAAPRWVLSQVQLQESGPGLVKPSETLSLTCVVSGGSISSSNW 60
Query: 61 WSWVRQPPGKGLEWIGEIYHSGSTNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVY 120
WSWVRQPPGKGLEWIGEIYHSGS NYNPSLKSRVTISVDKSKNQFSLKLSSVTAAD AVY
Sbjct: 61 WSWVRQPPGKGLEWIGEIYHSGSPNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADRAVY 120
Query: 121 YCARDTVRG 129
YCARDTVRG
Sbjct: 121 YCARDTVRG 129
>gi|239750741 PREDICTED: hypothetical protein XP_002347521 [Homo
sapiens]
Length = 151
Score = 126 bits (316), Expect = 8e-30
Identities = 62/110 (56%), Positives = 79/110 (71%), Gaps = 1/110 (0%)
Query: 15 LLLVAAPRWVLSQVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNWW-SWVRQPPGKGLE 73
LLL+ P WVLSQ+ L+ESGP LVKP+ TL+LTC SG S+S+S W+RQPPGK LE
Sbjct: 8 LLLLTIPSWVLSQITLKESGPTLVKPTQTLTLTCTFSGFSLSTSGVGVGWIRQPPGKALE 67
Query: 74 WIGEIYHSGSTNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCA 123
W+ IY + Y+PSLKSR+TI+ D SKNQ L ++++ DTA YYCA
Sbjct: 68 WLALIYWNDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCA 117
>gi|239750767 PREDICTED: hypothetical protein XP_002347529 [Homo
sapiens]
Length = 184
Score = 123 bits (308), Expect = 7e-29
Identities = 69/131 (52%), Positives = 86/131 (65%), Gaps = 6/131 (4%)
Query: 4 LHKNMKHL----WF-FLLLVAAPRWVLSQVQLQESGPGLVKPSGTLSLTCAVSGGSISSS 58
LHK+ K W +L LVA + V +VQL ESG GLVKP G+L L+CA SG + S
Sbjct: 13 LHKSEKRTTKESWLSWLFLVAILKGVQCEVQLVESGGGLVKPGGSLRLSCAASGFTFSDY 72
Query: 59 NWWSWVRQPPGKGLEWIGEIYHSGSTNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTA 118
+ +WVRQ PGKGLEW+ I S + Y S+K R TIS D +KN L+++S+ A DTA
Sbjct: 73 -YMNWVRQAPGKGLEWVSSISSSSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTA 131
Query: 119 VYYCARDTVRG 129
VYYCARDTVRG
Sbjct: 132 VYYCARDTVRG 142
>gi|239750743 PREDICTED: hypothetical protein XP_002347522 [Homo
sapiens]
Length = 172
Score = 123 bits (308), Expect = 7e-29
Identities = 68/119 (57%), Positives = 80/119 (67%), Gaps = 4/119 (3%)
Query: 12 WFFLLLVAAPRWVLSQVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNWWSWVRQPPGKG 71
W FL VA V +VQL ESG GLV+P G+L L+CA SG + SS W SWVRQ PGKG
Sbjct: 7 WVFL--VAILEGVQCEVQLVESGGGLVQPGGSLRLSCAASGFTFSSY-WMSWVRQAPGKG 63
Query: 72 LEWIGEIYHSGSTNYN-PSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCARDTVRG 129
LEW+ I GS Y S+K R TIS D +KN L+++S+ A DTAVYYCARDTVRG
Sbjct: 64 LEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARDTVRG 122
>gi|239758119 PREDICTED: similar to hCG2042717 [Homo sapiens]
Length = 196
Score = 120 bits (300), Expect = 6e-28
Identities = 68/127 (53%), Positives = 83/127 (65%), Gaps = 10/127 (7%)
Query: 12 WFFLL--------LVAAPRWVLSQVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNWWSW 63
W FL+ +V+ V QVQL ESG GLVKP G+L L+CA SG + S + SW
Sbjct: 7 WVFLVAIIKVSDQVVSVFAGVQCQVQLVESGGGLVKPGGSLRLSCAASGFTFSDY-YMSW 65
Query: 64 VRQPPGKGLEWIGEIYHSGS-TNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYC 122
+RQ PGKGLEW+ I S S TNY S+K R TIS D +KN L+++S+ A DTAVYYC
Sbjct: 66 IRQAPGKGLEWVSYISSSSSYTNYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYC 125
Query: 123 ARDTVRG 129
ARDTVRG
Sbjct: 126 ARDTVRG 132
>gi|239756213 PREDICTED: similar to hCG2042717 [Homo sapiens]
Length = 256
Score = 117 bits (294), Expect = 3e-27
Identities = 67/119 (56%), Positives = 80/119 (67%), Gaps = 4/119 (3%)
Query: 12 WFFLLLVAAPRWVLSQVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNWWSWVRQPPGKG 71
W FL VA V +VQL ESG GLVKP G+L L+CA SG + SS + +WVRQ PGKG
Sbjct: 31 WVFL--VAILEGVQCEVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSM-NWVRQAPGKG 87
Query: 72 LEWIGEIYHSGS-TNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCARDTVRG 129
LEW+ I S S Y S+K R TIS D +KN L+++S+ A DTAVYYCARDTVRG
Sbjct: 88 LEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARDTVRG 146
>gi|239750755 PREDICTED: hypothetical protein XP_002347525 [Homo
sapiens]
Length = 232
Score = 117 bits (294), Expect = 3e-27
Identities = 67/119 (56%), Positives = 80/119 (67%), Gaps = 4/119 (3%)
Query: 12 WFFLLLVAAPRWVLSQVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNWWSWVRQPPGKG 71
W FL VA V +VQL ESG GLVKP G+L L+CA SG + SS + +WVRQ PGKG
Sbjct: 7 WVFL--VAILEGVQCEVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSM-NWVRQAPGKG 63
Query: 72 LEWIGEIYHSGS-TNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCARDTVRG 129
LEW+ I S S Y S+K R TIS D +KN L+++S+ A DTAVYYCARDTVRG
Sbjct: 64 LEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARDTVRG 122
>gi|239745538 PREDICTED: similar to Ig heavy chain [Homo sapiens]
Length = 356
Score = 117 bits (294), Expect = 3e-27
Identities = 64/125 (51%), Positives = 82/125 (65%), Gaps = 1/125 (0%)
Query: 8 MKHLWFFLLLVAAPRWVLSQVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNWWSWVRQP 67
M+ + ++ LVA + V +VQL +SG GLV P G+L L+CA SG + SS WVRQ
Sbjct: 1 MEFVLSWVFLVAILKGVQCEVQLVQSGGGLVHPGGSLRLSCAGSGFTFSSYAM-HWVRQA 59
Query: 68 PGKGLEWIGEIYHSGSTNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCARDTV 127
PGKGLEW+ I G T Y S+K R TIS D +KN L+++S+ A D AVYYCARDTV
Sbjct: 60 PGKGLEWVSAIGTGGGTYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDMAVYYCARDTV 119
Query: 128 RGVFH 132
RG+ H
Sbjct: 120 RGMCH 124
Score = 26.6 bits (57), Expect = 8.3
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 28 VQLQESGPGLVKPSGTLSLTCAVSGGSISSSN-WWSWVRQPP 68
VQL +SG + KP ++ ++C SG + + W+ VR P
Sbjct: 253 VQLVQSGAEVKKPGASVKVSCQASGYTFTYCYLHWALVRSHP 294
>gi|239752583 PREDICTED: hypothetical protein XP_002348171 [Homo
sapiens]
Length = 146
Score = 116 bits (290), Expect = 8e-27
Identities = 64/119 (53%), Positives = 79/119 (66%), Gaps = 4/119 (3%)
Query: 12 WFFLLLVAAPRWVLSQVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNWWSWVRQPPGKG 71
W FL VA + V +VQL ESG GLV+P G+L L+CA SG + SS W WVRQ PGKG
Sbjct: 7 WVFL--VAILKGVQCEVQLVESGGGLVQPGGSLRLSCAASGFTFSSY-WMHWVRQAPGKG 63
Query: 72 LEWIGEIYHSGS-TNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCARDTVRG 129
L W+ I GS T+Y S+K + TIS D +KN L+++S+ A D AVYYC RDTVRG
Sbjct: 64 LVWVSRINSDGSSTSYADSMKGQFTISRDNAKNTLYLQMNSLRAEDMAVYYCTRDTVRG 122
>gi|239750748 PREDICTED: hypothetical protein XP_002347523 [Homo
sapiens]
Length = 260
Score = 116 bits (290), Expect = 8e-27
Identities = 64/118 (54%), Positives = 79/118 (66%), Gaps = 3/118 (2%)
Query: 12 WFFLLLVAAPRWVLSQVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNWWSWVRQPPGKG 71
W FL VA V +VQL ESG GLV+P G+L L+CA SG + SS + WVRQ GKG
Sbjct: 120 WVFL--VAILEGVQCEVQLVESGGGLVQPGGSLRLSCAASGFTFSSYDM-HWVRQATGKG 176
Query: 72 LEWIGEIYHSGSTNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCARDTVRG 129
LEW+ I +G T Y S+K R TIS + +KN L+++S+ A DTAVYYCARDTVRG
Sbjct: 177 LEWVSAIGTAGDTYYPGSVKGRFTISRENAKNSLYLQMNSLRAGDTAVYYCARDTVRG 234
>gi|239745544 PREDICTED: hypothetical protein XP_002343513 [Homo
sapiens]
Length = 146
Score = 116 bits (290), Expect = 8e-27
Identities = 64/119 (53%), Positives = 79/119 (66%), Gaps = 4/119 (3%)
Query: 12 WFFLLLVAAPRWVLSQVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNWWSWVRQPPGKG 71
W FL VA + V +VQL ESG GLV+P G+L L+CA SG + SS W WVRQ PGKG
Sbjct: 7 WVFL--VAILKGVQCEVQLVESGGGLVQPGGSLRLSCAASGFTFSSY-WMHWVRQAPGKG 63
Query: 72 LEWIGEIYHSGS-TNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCARDTVRG 129
L W+ I GS T+Y S+K + TIS D +KN L+++S+ A D AVYYC RDTVRG
Sbjct: 64 LVWVSRINSDGSSTSYADSMKGQFTISRDNAKNTLYLQMNSLRAEDMAVYYCTRDTVRG 122
>gi|169207532 PREDICTED: similar to hCG2042717 [Homo sapiens]
Length = 218
Score = 115 bits (289), Expect = 1e-26
Identities = 66/119 (55%), Positives = 79/119 (66%), Gaps = 4/119 (3%)
Query: 12 WFFLLLVAAPRWVLSQVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNWWSWVRQPPGKG 71
W FL VA R V QVQL ESG G+V+P +L L+CA SG + SS WVRQ PGKG
Sbjct: 52 WVFL--VALLRGVQCQVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGM-HWVRQAPGKG 108
Query: 72 LEWIGEIYHSGSTNYNP-SLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCARDTVRG 129
LEW+ I + GS Y S+K R TIS D SKN L+++S+ A DTAVYYCA+DTVRG
Sbjct: 109 LEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKDTVRG 167
>gi|239745542 PREDICTED: similar to hCG1793095 [Homo sapiens]
Length = 148
Score = 115 bits (289), Expect = 1e-26
Identities = 66/120 (55%), Positives = 80/120 (66%), Gaps = 6/120 (5%)
Query: 12 WFFLLLVAAPRWVLSQVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNWW-SWVRQPPGK 70
W FL VA + V +VQL ESG GL +P G L L+ A SG ++ S W+ SW+ Q PGK
Sbjct: 7 WVFL--VAILQGVHCEVQLVESGRGLAQPGGYLKLSGAASGFTVGS--WYMSWIHQAPGK 62
Query: 71 GLEWIGEIYHSG-STNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCARDTVRG 129
GLEW+ I SG STNY S+K R TIS D SKN L+++S+ DTAVYYCARDTVRG
Sbjct: 63 GLEWVSYISSSGCSTNYADSVKGRFTISTDNSKNTLYLQMNSLRVEDTAVYYCARDTVRG 122
>gi|239745527 PREDICTED: hypothetical protein XP_002343511 [Homo
sapiens]
Length = 147
Score = 115 bits (289), Expect = 1e-26
Identities = 63/122 (51%), Positives = 81/122 (66%), Gaps = 1/122 (0%)
Query: 8 MKHLWFFLLLVAAPRWVLSQVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNWWSWVRQP 67
M+ + ++ LVA + V +VQL +SG GLV+P G+L L+CA SG + SS WVRQ
Sbjct: 1 MEFVLSWVFLVAILKGVQCEVQLVQSGGGLVQPGGSLRLSCAGSGFTFSSYAM-HWVRQA 59
Query: 68 PGKGLEWIGEIYHSGSTNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCARDTV 127
PGKGLEW+ I G T Y S+K R TIS D +KN L+++S+ A D AVYYCARDTV
Sbjct: 60 PGKGLEWVSAIGTGGGTYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDMAVYYCARDTV 119
Query: 128 RG 129
RG
Sbjct: 120 RG 121
>gi|169217837 PREDICTED: similar to hCG1773549 [Homo sapiens]
Length = 120
Score = 110 bits (276), Expect = 3e-25
Identities = 61/121 (50%), Positives = 79/121 (65%), Gaps = 2/121 (1%)
Query: 8 MKHLWFFLLLVAAPRWVLSQVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNWWSWVRQP 67
M W FL +VAA V SQVQL +SG + KP ++ ++C SGG+ SS SWVRQ
Sbjct: 1 MDWTWRFLFVVAAATGVQSQVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAI-SWVRQA 59
Query: 68 PGKGLEWIGEIYHS-GSTNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCARDT 126
PG+GLEW+G I G+ NY + RVTI+ DKS + ++LSS+ + DTAVYYCARDT
Sbjct: 60 PGQGLEWMGGIIPIFGTANYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCARDT 119
Query: 127 V 127
V
Sbjct: 120 V 120
>gi|239758153 PREDICTED: similar to Ig heavy chain [Homo sapiens]
Length = 214
Score = 110 bits (275), Expect = 4e-25
Identities = 62/125 (49%), Positives = 79/125 (63%), Gaps = 1/125 (0%)
Query: 8 MKHLWFFLLLVAAPRWVLSQVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNWWSWVRQP 67
M+ + ++ LVA + V +VQL +SG GLV P G+L L+CA SG + SS WVRQ
Sbjct: 1 MEFVLSWVFLVAILKGVQCEVQLVQSGGGLVHPGGSLRLSCAGSGFTFSSYAM-HWVRQA 59
Query: 68 PGKGLEWIGEIYHSGSTNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCARDTV 127
PGKGLEW+ I G T Y S+K R TIS D +KN L+++S+ A D AVYYCARDT
Sbjct: 60 PGKGLEWVSAIGTGGGTYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDMAVYYCARDTH 119
Query: 128 RGVFH 132
V H
Sbjct: 120 PPVCH 124
>gi|239756221 PREDICTED: similar to hCG2003024 [Homo sapiens]
Length = 135
Score = 108 bits (271), Expect = 1e-24
Identities = 64/121 (52%), Positives = 81/121 (66%), Gaps = 6/121 (4%)
Query: 12 WFFLLLVAAPRWVLSQVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNWWSWVRQPPGKG 71
W FL VA + V +VQL ESG GLV+P G+L L+CA SG + S ++ SWVRQ GKG
Sbjct: 7 WVFL--VAILKGVQCEVQLVESGGGLVQPGGSLRLSCAASGFTFSD-HYMSWVRQAQGKG 63
Query: 72 LEWIGEIYH---SGSTNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCARDTVR 128
LE +G I + S +T Y S+K R+TIS + SKN L++SS+ D AVYYCARDTVR
Sbjct: 64 LELVGLIRNKANSYTTEYAASVKGRLTISREDSKNTLYLQMSSLKTEDLAVYYCARDTVR 123
Query: 129 G 129
G
Sbjct: 124 G 124
>gi|239750773 PREDICTED: similar to hCG2003024 [Homo sapiens]
Length = 181
Score = 108 bits (271), Expect = 1e-24
Identities = 64/121 (52%), Positives = 81/121 (66%), Gaps = 6/121 (4%)
Query: 12 WFFLLLVAAPRWVLSQVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNWWSWVRQPPGKG 71
W FL VA + V +VQL ESG GLV+P G+L L+CA SG + S ++ SWVRQ GKG
Sbjct: 7 WVFL--VAILKGVQCEVQLVESGGGLVQPGGSLRLSCAASGFTFSD-HYMSWVRQAQGKG 63
Query: 72 LEWIGEIYH---SGSTNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCARDTVR 128
LE +G I + S +T Y S+K R+TIS + SKN L++SS+ D AVYYCARDTVR
Sbjct: 64 LELVGLIRNKANSYTTEYAASVKGRLTISREDSKNTLYLQMSSLKTEDLAVYYCARDTVR 123
Query: 129 G 129
G
Sbjct: 124 G 124
>gi|239750763 PREDICTED: hypothetical protein XP_002347527 [Homo
sapiens]
Length = 183
Score = 107 bits (268), Expect = 3e-24
Identities = 66/126 (52%), Positives = 81/126 (64%), Gaps = 5/126 (3%)
Query: 12 WFFLLLVAAPRWVLSQVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNWWSWVRQPPGKG 71
W FL VA + V +VQL ESG GLV+P G+L L+CA SG + SS WVRQ PGKG
Sbjct: 8 WVFL--VAIFKGVQCEVQLVESGEGLVQPGGSLRLSCAASGFTFSSYAM-HWVRQAPGKG 64
Query: 72 LEWIGEIY-HSGSTNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCARDTVRGV 130
LE++ I + GST Y S+K R TIS D SKN L++ S+ A D AVYYCARDT V
Sbjct: 65 LEYVSAISSNGGSTYYADSVKGRFTISRDNSKNTLYLQMGSLRAEDMAVYYCARDT-EDV 123
Query: 131 FHKVQV 136
F V++
Sbjct: 124 FAVVKI 129
>gi|239745042 PREDICTED: similar to hCG2003024 [Homo sapiens]
Length = 181
Score = 107 bits (268), Expect = 3e-24
Identities = 63/121 (52%), Positives = 81/121 (66%), Gaps = 6/121 (4%)
Query: 12 WFFLLLVAAPRWVLSQVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNWWSWVRQPPGKG 71
W FL VA + V +VQL ESG GLV+P G+L L+CA SG + S ++ SWVRQ GKG
Sbjct: 7 WVFL--VAILKGVQCEVQLVESGGGLVQPGGSLRLSCAASGFTFSD-HYMSWVRQAQGKG 63
Query: 72 LEWIGEIYH---SGSTNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCARDTVR 128
LE +G I + S +T Y S+K R+TIS + SKN L++S++ D AVYYCARDTVR
Sbjct: 64 LELVGLIRNKANSYTTEYAASVKGRLTISREDSKNTLYLQMSNLKTEDLAVYYCARDTVR 123
Query: 129 G 129
G
Sbjct: 124 G 124
>gi|239756211 PREDICTED: similar to pre-B lymphocyte gene 2 [Homo
sapiens]
Length = 120
Score = 103 bits (258), Expect = 4e-23
Identities = 57/121 (47%), Positives = 78/121 (64%), Gaps = 2/121 (1%)
Query: 8 MKHLWFFLLLVAAPRWVLSQVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNWWSWVRQP 67
M W L LVAA SQVQL +SG + KP ++ ++C SG + +S SWVRQ
Sbjct: 1 MDWTWSILFLVAAATGAHSQVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGI-SWVRQA 59
Query: 68 PGKGLEWIGEIY-HSGSTNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCARDT 126
PG+GLEW+G I ++G+TNY L+ RVT++ D S + ++L S+ + DTAVYYCARDT
Sbjct: 60 PGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDT 119
Query: 127 V 127
V
Sbjct: 120 V 120
>gi|239750752 PREDICTED: hypothetical protein XP_002347494 [Homo
sapiens]
Length = 120
Score = 103 bits (258), Expect = 4e-23
Identities = 57/121 (47%), Positives = 78/121 (64%), Gaps = 2/121 (1%)
Query: 8 MKHLWFFLLLVAAPRWVLSQVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNWWSWVRQP 67
M W L LVAA SQVQL +SG + KP ++ ++C SG + +S SWVRQ
Sbjct: 1 MDWTWSILFLVAAATGAHSQVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGI-SWVRQA 59
Query: 68 PGKGLEWIGEIY-HSGSTNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCARDT 126
PG+GLEW+G I ++G+TNY L+ RVT++ D S + ++L S+ + DTAVYYCARDT
Sbjct: 60 PGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDT 119
Query: 127 V 127
V
Sbjct: 120 V 120
>gi|239756209 PREDICTED: hypothetical protein [Homo sapiens]
Length = 147
Score = 102 bits (255), Expect = 9e-23
Identities = 57/118 (48%), Positives = 75/118 (63%), Gaps = 4/118 (3%)
Query: 12 WFFLLLVAAPRWVLSQVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNWWSWVRQPPGKG 71
W FLL + + V +VQL ESG GLV+P +L L+CA SG + WVRQ PGKG
Sbjct: 7 WIFLLAIL--KGVQCEVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAM-HWVRQAPGKG 63
Query: 72 LEWIGEI-YHSGSTNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCARDTVR 128
LEW+ I ++SGS Y S+K R TIS D +KN L+++S+ A DTA+YYC R + R
Sbjct: 64 LEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCGRSSGR 121
>gi|239750750 PREDICTED: hypothetical protein XP_002347524 [Homo
sapiens]
Length = 202
Score = 102 bits (255), Expect = 9e-23
Identities = 57/117 (48%), Positives = 76/117 (64%), Gaps = 5/117 (4%)
Query: 12 WFFLLLVAAPRWVLSQVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNWWSWVRQPPGKG 71
W FL + + V +VQL ESG GLVKP G+L L+CA SG + S++ W SWVRQ PGKG
Sbjct: 7 WIFLAAIL--KGVQCEVQLVESGGGLVKPGGSLRLSCAASGFTFSNA-WMSWVRQAPGKG 63
Query: 72 LEWIGEIYH-SGSTNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYY-CARDT 126
LEW+G Y +G+T Y + RVT++ D S + ++LSS + D VYY CA+DT
Sbjct: 64 LEWVGRSYSGNGNTGYAQKFQGRVTMTRDTSTSTAYMELSSQRSEDIDVYYCCAQDT 120
>gi|169217835 PREDICTED: similar to hCG2038921 [Homo sapiens]
Length = 120
Score = 97.8 bits (242), Expect = 3e-21
Identities = 53/117 (45%), Positives = 73/117 (62%), Gaps = 2/117 (1%)
Query: 12 WFFLLLVAAPRWVLSQVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNWWSWVRQPPGKG 71
W LLLVAA ++VQL +SG + KP T+ ++C VSG + + + WV+Q PGKG
Sbjct: 5 WRILLLVAAATGTHAEVQLVQSGAEVKKPGATVKISCKVSGYTFTDY-YMHWVQQAPGKG 63
Query: 72 LEWIGEIY-HSGSTNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCARDTV 127
LEW+G + G T Y + RVTI+ D S + ++LSS+ + DTAVYYCA DTV
Sbjct: 64 LEWMGLVDPEDGETIYAEKFQGRVTITADTSTDTAYMELSSLRSEDTAVYYCATDTV 120
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.131 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,786,360
Number of Sequences: 37866
Number of extensions: 251035
Number of successful extensions: 975
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 66
Number of HSP's that attempted gapping in prelim test: 823
Number of HSP's gapped (non-prelim): 159
length of query: 149
length of database: 18,247,518
effective HSP length: 93
effective length of query: 56
effective length of database: 14,725,980
effective search space: 824654880
effective search space used: 824654880
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.