Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 117938274
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|117938274 jumpy isoform 3 [Homo sapiens]
(538 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|117938274 jumpy isoform 3 [Homo sapiens] 1089 0.0
gi|117938272 jumpy isoform 1 [Homo sapiens] 1024 0.0
gi|117938270 jumpy isoform 2 [Homo sapiens] 981 0.0
gi|23510389 myotubularin-related protein 3 isoform b [Homo sapiens] 49 2e-05
gi|23510387 myotubularin-related protein 3 isoform a [Homo sapiens] 49 2e-05
gi|10835109 myotubularin-related protein 3 isoform c [Homo sapiens] 49 2e-05
gi|217272865 myotubularin related protein 4 [Homo sapiens] 47 3e-05
gi|4557896 myotubularin [Homo sapiens] 45 2e-04
gi|44680154 myotubularin-related protein 2 isoform 1 [Homo sapiens] 40 0.007
gi|41350318 myotubularin-related protein 2 isoform 2 [Homo sapiens] 40 0.007
gi|41350316 myotubularin-related protein 2 isoform 2 [Homo sapiens] 40 0.007
gi|28872761 myotubularin-related protein 1 [Homo sapiens] 37 0.035
gi|134142348 myotubularin related protein 6 [Homo sapiens] 37 0.046
gi|225543474 myotubularin related protein 7 [Homo sapiens] 37 0.060
gi|125625322 RALBP1 associated Eps domain containing 2 isoform 2... 33 0.50
gi|125625326 RALBP1 associated Eps domain containing 2 isoform 1... 33 0.50
gi|102469037 jun D proto-oncogene [Homo sapiens] 32 1.5
gi|20127580 BTB (POZ) domain containing 2 [Homo sapiens] 32 1.9
gi|21361759 myotubularin related protein 8 [Homo sapiens] 32 1.9
gi|29788760 diacylglycerol kinase, eta isoform 1 [Homo sapiens] 30 4.3
gi|29788751 diacylglycerol kinase, eta isoform 2 [Homo sapiens] 30 4.3
gi|122692281 hypothetical protein LOC645369 [Homo sapiens] 30 5.6
gi|157364934 fibrosin [Homo sapiens] 30 5.6
gi|239735519 SET binding factor 1 [Homo sapiens] 30 7.3
gi|24497554 homeobox A13 [Homo sapiens] 29 9.5
>gi|117938274 jumpy isoform 3 [Homo sapiens]
Length = 538
Score = 1089 bits (2817), Expect = 0.0
Identities = 538/538 (100%), Positives = 538/538 (100%)
Query: 1 MAGARAAAAAASAGSSASSGNQPPQELGLGELLEEFSRTQYRAKDGSGTGGSKVERIEKR 60
MAGARAAAAAASAGSSASSGNQPPQELGLGELLEEFSRTQYRAKDGSGTGGSKVERIEKR
Sbjct: 1 MAGARAAAAAASAGSSASSGNQPPQELGLGELLEEFSRTQYRAKDGSGTGGSKVERIEKR 60
Query: 61 CLELFGRDYCFSVIPNTNGDICGHYPRHIVFLEYESSEKEKDTFESTVQVSKLQDLIHRS 120
CLELFGRDYCFSVIPNTNGDICGHYPRHIVFLEYESSEKEKDTFESTVQVSKLQDLIHRS
Sbjct: 61 CLELFGRDYCFSVIPNTNGDICGHYPRHIVFLEYESSEKEKDTFESTVQVSKLQDLIHRS 120
Query: 121 KMARCRGRFVCPVILFKGKHICRSATLAGWGELYGRSGYNYFFSGGADDAWADVEDVTEE 180
KMARCRGRFVCPVILFKGKHICRSATLAGWGELYGRSGYNYFFSGGADDAWADVEDVTEE
Sbjct: 121 KMARCRGRFVCPVILFKGKHICRSATLAGWGELYGRSGYNYFFSGGADDAWADVEDVTEE 180
Query: 181 DCALRSGDTHLFDKVRGYDIKLLRYLSVKYICDLMVENKKVKFGMNVTSSEKVDKAQRYA 240
DCALRSGDTHLFDKVRGYDIKLLRYLSVKYICDLMVENKKVKFGMNVTSSEKVDKAQRYA
Sbjct: 181 DCALRSGDTHLFDKVRGYDIKLLRYLSVKYICDLMVENKKVKFGMNVTSSEKVDKAQRYA 240
Query: 241 DFTLLSIPYPGCEFFKEYKDRDYMAEGLIFNWKQDYVDAPLSIPDFLTHSLNIDWSQYQC 300
DFTLLSIPYPGCEFFKEYKDRDYMAEGLIFNWKQDYVDAPLSIPDFLTHSLNIDWSQYQC
Sbjct: 241 DFTLLSIPYPGCEFFKEYKDRDYMAEGLIFNWKQDYVDAPLSIPDFLTHSLNIDWSQYQC 300
Query: 301 WDLVQQTQNYLKLLLSLVNSDDDSGLLVHCISGWDRTPLFISLLRLSLWADGLIHTSLKP 360
WDLVQQTQNYLKLLLSLVNSDDDSGLLVHCISGWDRTPLFISLLRLSLWADGLIHTSLKP
Sbjct: 301 WDLVQQTQNYLKLLLSLVNSDDDSGLLVHCISGWDRTPLFISLLRLSLWADGLIHTSLKP 360
Query: 361 TEILYLTVAYDWFLFGHMLVDRLSKGEEIFFFCFNFLKHITSEEFSALKTQRRKSLPARD 420
TEILYLTVAYDWFLFGHMLVDRLSKGEEIFFFCFNFLKHITSEEFSALKTQRRKSLPARD
Sbjct: 361 TEILYLTVAYDWFLFGHMLVDRLSKGEEIFFFCFNFLKHITSEEFSALKTQRRKSLPARD 420
Query: 421 GGFTLEDICMLRRKDRGSTTSLGSDFSLVMESSPGATGSFTYEAVELVPAGAPTQAAWLA 480
GGFTLEDICMLRRKDRGSTTSLGSDFSLVMESSPGATGSFTYEAVELVPAGAPTQAAWLA
Sbjct: 421 GGFTLEDICMLRRKDRGSTTSLGSDFSLVMESSPGATGSFTYEAVELVPAGAPTQAAWLA 480
Query: 481 ALSDRETRLQEVRSAFLAAYSSTVGLRAVAPSPSGAIGGLLEQFARGVGLRSISSNAL 538
ALSDRETRLQEVRSAFLAAYSSTVGLRAVAPSPSGAIGGLLEQFARGVGLRSISSNAL
Sbjct: 481 ALSDRETRLQEVRSAFLAAYSSTVGLRAVAPSPSGAIGGLLEQFARGVGLRSISSNAL 538
>gi|117938272 jumpy isoform 1 [Homo sapiens]
Length = 598
Score = 1024 bits (2647), Expect = 0.0
Identities = 526/598 (87%), Positives = 529/598 (88%), Gaps = 60/598 (10%)
Query: 1 MAGARAAAAAASAGSSASSGNQPPQELGLGELLEEFSRTQYRAKDGSGTGGSKVERIEKR 60
MAGARAAAAAASAGSSASSGNQPPQELGLGELLEEFSRTQYRAKDGSGTGGSKVERIEKR
Sbjct: 1 MAGARAAAAAASAGSSASSGNQPPQELGLGELLEEFSRTQYRAKDGSGTGGSKVERIEKR 60
Query: 61 CLELFGRDYCFSVIPNTNGDICGHYPRHIVFLEYESSEKEKDTFESTVQVSKLQDLIHRS 120
CLELFGRDYCFSVIPNTNGDICGHYPRHIVFLEYESSEKEKDTFESTVQVSKLQDLIHRS
Sbjct: 61 CLELFGRDYCFSVIPNTNGDICGHYPRHIVFLEYESSEKEKDTFESTVQVSKLQDLIHRS 120
Query: 121 KMARCRGRFVCPVILFKGKHICRSATLAGWGELYGRSGYNYFFSGGADDAWADVEDVTEE 180
KMARCRGRFVCPVILFKGKHICRSATLAGWGELYGRSGYNYFFSGGADDAWADVEDVTEE
Sbjct: 121 KMARCRGRFVCPVILFKGKHICRSATLAGWGELYGRSGYNYFFSGGADDAWADVEDVTEE 180
Query: 181 DCALRSGDTHLFDKVRGYDIKLLRYLSVKYICDLMVENKKVKFGMNVTSSEKVDKAQRYA 240
DCALRSGDTHLFDKVRGYDIKLLRYLSVKYICDLMVENKKVKFGMNVTSSEKVDKAQRYA
Sbjct: 181 DCALRSGDTHLFDKVRGYDIKLLRYLSVKYICDLMVENKKVKFGMNVTSSEKVDKAQRYA 240
Query: 241 DFTLLSIPYPGCEFFKEYKDRDYMAEGLIFNWKQDYVDAPLSIPDFLTHSLNIDWSQYQC 300
DFTLLSIPYPGCEFFKEYKDRDYMAEGLIFNWKQDYVDAPLSIPDFLTHSLNIDWSQYQC
Sbjct: 241 DFTLLSIPYPGCEFFKEYKDRDYMAEGLIFNWKQDYVDAPLSIPDFLTHSLNIDWSQYQC 300
Query: 301 WDLVQQTQNYLKLLLSLVNSDDDSGLLVHCISGWDRTPLFISLLRLSLWADGLIHTSLKP 360
WDLVQQTQNYLKLLLSLVNSDDDSGLLVHCISGWDRTPLFISLLRLSLWADGLIHTSLKP
Sbjct: 301 WDLVQQTQNYLKLLLSLVNSDDDSGLLVHCISGWDRTPLFISLLRLSLWADGLIHTSLKP 360
Query: 361 TEILYLTVAYDWFLFGHMLVDRLSKGEEIFFFCFNFLKHITSEEFSALKTQRRKSLPARD 420
TEILYLTVAYDWFLFGHMLVDRLSKGEEIFFFCFNFLKHITSEEFSALKTQRRKSLPARD
Sbjct: 361 TEILYLTVAYDWFLFGHMLVDRLSKGEEIFFFCFNFLKHITSEEFSALKTQRRKSLPARD 420
Query: 421 GGFTLEDICMLRRKDRGSTTSLGSDFSLVMESSPGATGSFTYEAVELVPAGAPTQAAWLA 480
GGFTLEDICMLRRKDRGSTTSLGSDFSLVMESSPGATGSFTYEAVELVPAGAPTQAAW
Sbjct: 421 GGFTLEDICMLRRKDRGSTTSLGSDFSLVMESSPGATGSFTYEAVELVPAGAPTQAAWRK 480
Query: 481 ALS---------------DR---ETRLQEVRSAF------------------------LA 498
+ S DR + L E RS+ LA
Sbjct: 481 SHSSSPQSVLWNRPQPSEDRLPSQQGLAEARSSSSSSSNHSDNFFRMGSSPLEVPKPRLA 540
Query: 499 AYS------------------STVGLRAVAPSPSGAIGGLLEQFARGVGLRSISSNAL 538
A S STVGLRAVAPSPSGAIGGLLEQFARGVGLRSISSNAL
Sbjct: 541 ALSDRETRLQEVRSAFLAAYSSTVGLRAVAPSPSGAIGGLLEQFARGVGLRSISSNAL 598
>gi|117938270 jumpy isoform 2 [Homo sapiens]
Length = 650
Score = 981 bits (2535), Expect = 0.0
Identities = 478/478 (100%), Positives = 478/478 (100%)
Query: 1 MAGARAAAAAASAGSSASSGNQPPQELGLGELLEEFSRTQYRAKDGSGTGGSKVERIEKR 60
MAGARAAAAAASAGSSASSGNQPPQELGLGELLEEFSRTQYRAKDGSGTGGSKVERIEKR
Sbjct: 1 MAGARAAAAAASAGSSASSGNQPPQELGLGELLEEFSRTQYRAKDGSGTGGSKVERIEKR 60
Query: 61 CLELFGRDYCFSVIPNTNGDICGHYPRHIVFLEYESSEKEKDTFESTVQVSKLQDLIHRS 120
CLELFGRDYCFSVIPNTNGDICGHYPRHIVFLEYESSEKEKDTFESTVQVSKLQDLIHRS
Sbjct: 61 CLELFGRDYCFSVIPNTNGDICGHYPRHIVFLEYESSEKEKDTFESTVQVSKLQDLIHRS 120
Query: 121 KMARCRGRFVCPVILFKGKHICRSATLAGWGELYGRSGYNYFFSGGADDAWADVEDVTEE 180
KMARCRGRFVCPVILFKGKHICRSATLAGWGELYGRSGYNYFFSGGADDAWADVEDVTEE
Sbjct: 121 KMARCRGRFVCPVILFKGKHICRSATLAGWGELYGRSGYNYFFSGGADDAWADVEDVTEE 180
Query: 181 DCALRSGDTHLFDKVRGYDIKLLRYLSVKYICDLMVENKKVKFGMNVTSSEKVDKAQRYA 240
DCALRSGDTHLFDKVRGYDIKLLRYLSVKYICDLMVENKKVKFGMNVTSSEKVDKAQRYA
Sbjct: 181 DCALRSGDTHLFDKVRGYDIKLLRYLSVKYICDLMVENKKVKFGMNVTSSEKVDKAQRYA 240
Query: 241 DFTLLSIPYPGCEFFKEYKDRDYMAEGLIFNWKQDYVDAPLSIPDFLTHSLNIDWSQYQC 300
DFTLLSIPYPGCEFFKEYKDRDYMAEGLIFNWKQDYVDAPLSIPDFLTHSLNIDWSQYQC
Sbjct: 241 DFTLLSIPYPGCEFFKEYKDRDYMAEGLIFNWKQDYVDAPLSIPDFLTHSLNIDWSQYQC 300
Query: 301 WDLVQQTQNYLKLLLSLVNSDDDSGLLVHCISGWDRTPLFISLLRLSLWADGLIHTSLKP 360
WDLVQQTQNYLKLLLSLVNSDDDSGLLVHCISGWDRTPLFISLLRLSLWADGLIHTSLKP
Sbjct: 301 WDLVQQTQNYLKLLLSLVNSDDDSGLLVHCISGWDRTPLFISLLRLSLWADGLIHTSLKP 360
Query: 361 TEILYLTVAYDWFLFGHMLVDRLSKGEEIFFFCFNFLKHITSEEFSALKTQRRKSLPARD 420
TEILYLTVAYDWFLFGHMLVDRLSKGEEIFFFCFNFLKHITSEEFSALKTQRRKSLPARD
Sbjct: 361 TEILYLTVAYDWFLFGHMLVDRLSKGEEIFFFCFNFLKHITSEEFSALKTQRRKSLPARD 420
Query: 421 GGFTLEDICMLRRKDRGSTTSLGSDFSLVMESSPGATGSFTYEAVELVPAGAPTQAAW 478
GGFTLEDICMLRRKDRGSTTSLGSDFSLVMESSPGATGSFTYEAVELVPAGAPTQAAW
Sbjct: 421 GGFTLEDICMLRRKDRGSTTSLGSDFSLVMESSPGATGSFTYEAVELVPAGAPTQAAW 478
Score = 113 bits (282), Expect = 5e-25
Identities = 60/60 (100%), Positives = 60/60 (100%)
Query: 479 LAALSDRETRLQEVRSAFLAAYSSTVGLRAVAPSPSGAIGGLLEQFARGVGLRSISSNAL 538
LAALSDRETRLQEVRSAFLAAYSSTVGLRAVAPSPSGAIGGLLEQFARGVGLRSISSNAL
Sbjct: 591 LAALSDRETRLQEVRSAFLAAYSSTVGLRAVAPSPSGAIGGLLEQFARGVGLRSISSNAL 650
>gi|23510389 myotubularin-related protein 3 isoform b [Homo sapiens]
Length = 1161
Score = 48.5 bits (114), Expect = 2e-05
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 311 LKLLLSLVNS--DDDSGLLVHCISGWDRTPLFISLLRLSLWADGLIHTSLKPTEILYLTV 368
LK L +V++ D +LVHC GWDRTP ++L +L L+ + E + V
Sbjct: 392 LKSALLVVHAVDQDQRPVLVHCSDGWDRTPQIVALAKL------LLDPYYRTIEGFQVLV 445
Query: 369 AYDWFLFGHMLVDRLSKGE 387
+W FGH DR GE
Sbjct: 446 EMEWLDFGHKFADRCGHGE 464
>gi|23510387 myotubularin-related protein 3 isoform a [Homo sapiens]
Length = 1170
Score = 48.5 bits (114), Expect = 2e-05
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 311 LKLLLSLVNS--DDDSGLLVHCISGWDRTPLFISLLRLSLWADGLIHTSLKPTEILYLTV 368
LK L +V++ D +LVHC GWDRTP ++L +L L+ + E + V
Sbjct: 392 LKSALLVVHAVDQDQRPVLVHCSDGWDRTPQIVALAKL------LLDPYYRTIEGFQVLV 445
Query: 369 AYDWFLFGHMLVDRLSKGE 387
+W FGH DR GE
Sbjct: 446 EMEWLDFGHKFADRCGHGE 464
>gi|10835109 myotubularin-related protein 3 isoform c [Homo sapiens]
Length = 1198
Score = 48.5 bits (114), Expect = 2e-05
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 311 LKLLLSLVNS--DDDSGLLVHCISGWDRTPLFISLLRLSLWADGLIHTSLKPTEILYLTV 368
LK L +V++ D +LVHC GWDRTP ++L +L L+ + E + V
Sbjct: 392 LKSALLVVHAVDQDQRPVLVHCSDGWDRTPQIVALAKL------LLDPYYRTIEGFQVLV 445
Query: 369 AYDWFLFGHMLVDRLSKGE 387
+W FGH DR GE
Sbjct: 446 EMEWLDFGHKFADRCGHGE 464
>gi|217272865 myotubularin related protein 4 [Homo sapiens]
Length = 1195
Score = 47.4 bits (111), Expect = 3e-05
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 8/88 (9%)
Query: 304 VQQTQNYLKLLLSLVNSDDDSG--LLVHCISGWDRTPLFISLLRLSLWADGLIHTSLKPT 361
+Q LK + + N+ D G +LVHC GWDRTP ++L ++ L+ +
Sbjct: 379 LQHLSVMLKAAVLVANTVDREGRPVLVHCSDGWDRTPQIVALAKI------LLDPYYRTL 432
Query: 362 EILYLTVAYDWFLFGHMLVDRLSKGEEI 389
E + V DW FGH DR E +
Sbjct: 433 EGFQVLVESDWLDFGHKFGDRCGHQENV 460
>gi|4557896 myotubularin [Homo sapiens]
Length = 603
Score = 44.7 bits (104), Expect = 2e-04
Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Query: 320 SDDDSGLLVHCISGWDRTPLFISLLRLSLWADGLIHTSLKPTEILYLTVAYDWFLFGHML 379
S S +LVHC GWDRT SL L L + S++ EIL V +W FGH
Sbjct: 365 SSGKSSVLVHCSDGWDRTAQLTSLAMLML---DSFYRSIEGFEIL---VQKEWISFGHKF 418
Query: 380 VDRLSKGEE 388
R+ G++
Sbjct: 419 ASRIGHGDK 427
>gi|44680154 myotubularin-related protein 2 isoform 1 [Homo sapiens]
Length = 643
Score = 39.7 bits (91), Expect = 0.007
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Query: 324 SGLLVHCISGWDRTPLFISLLRLSLWADGLIHTSLKPTEILYLTVAYDWFLFGHMLVDRL 383
+ ++VHC GWDRT SL L L DG T ++ E+L V +W FGH R+
Sbjct: 411 TSVVVHCSDGWDRTAQLTSLAMLML--DGYYRT-IRGFEVL---VEKEWLSFGHRFQLRV 464
Query: 384 SKGEE 388
G++
Sbjct: 465 GHGDK 469
>gi|41350318 myotubularin-related protein 2 isoform 2 [Homo sapiens]
Length = 571
Score = 39.7 bits (91), Expect = 0.007
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Query: 324 SGLLVHCISGWDRTPLFISLLRLSLWADGLIHTSLKPTEILYLTVAYDWFLFGHMLVDRL 383
+ ++VHC GWDRT SL L L DG T ++ E+L V +W FGH R+
Sbjct: 339 TSVVVHCSDGWDRTAQLTSLAMLML--DGYYRT-IRGFEVL---VEKEWLSFGHRFQLRV 392
Query: 384 SKGEE 388
G++
Sbjct: 393 GHGDK 397
>gi|41350316 myotubularin-related protein 2 isoform 2 [Homo sapiens]
Length = 571
Score = 39.7 bits (91), Expect = 0.007
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Query: 324 SGLLVHCISGWDRTPLFISLLRLSLWADGLIHTSLKPTEILYLTVAYDWFLFGHMLVDRL 383
+ ++VHC GWDRT SL L L DG T ++ E+L V +W FGH R+
Sbjct: 339 TSVVVHCSDGWDRTAQLTSLAMLML--DGYYRT-IRGFEVL---VEKEWLSFGHRFQLRV 392
Query: 384 SKGEE 388
G++
Sbjct: 393 GHGDK 397
>gi|28872761 myotubularin-related protein 1 [Homo sapiens]
Length = 665
Score = 37.4 bits (85), Expect = 0.035
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 6/65 (9%)
Query: 324 SGLLVHCISGWDRTPLFISLLRLSLWADGLIHTSLKPTEILYLTVAYDWFLFGHMLVDRL 383
+ ++VHC GWDRT SL L L + ++K E L V +W FGH R+
Sbjct: 432 TSVVVHCSDGWDRTAQLTSLAMLML---DSYYRTIKGFETL---VEKEWISFGHRFALRV 485
Query: 384 SKGEE 388
G +
Sbjct: 486 GHGND 490
>gi|134142348 myotubularin related protein 6 [Homo sapiens]
Length = 621
Score = 37.0 bits (84), Expect = 0.046
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
Query: 322 DDSGLLVHCISGWDRTPLFISLLRLSLWADGLIHTSLKPTEILYLTVAYDWFLFGHMLVD 381
+++ +LVHC GWDRT SL L L+ + + + + + DW FGH +
Sbjct: 328 ENASVLVHCSDGWDRTSQVCSLGSL------LLDSYYRTIKGFMVLIEKDWISFGHKFSE 381
Query: 382 R 382
R
Sbjct: 382 R 382
>gi|225543474 myotubularin related protein 7 [Homo sapiens]
Length = 660
Score = 36.6 bits (83), Expect = 0.060
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Query: 320 SDDDSGLLVHCISGWDRTPLFISLLRLSLWADGLIHTSLKPTEILYLTVAYDWFLFGH 377
S++ + +LVHC GWDRT S+ L L+ + + + + DW FGH
Sbjct: 328 SEEGASVLVHCSDGWDRTAQVCSVASL------LLDPHYRTLKGFMVLIEKDWISFGH 379
>gi|125625322 RALBP1 associated Eps domain containing 2 isoform 2
[Homo sapiens]
Length = 659
Score = 33.5 bits (75), Expect = 0.50
Identities = 25/59 (42%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 2 AGARAAAAAASAGSSASSGNQPPQELGLGE---LLEEFSRTQYRAKDGSGTGGSKVERI 57
A A AAAAAA+AG SG PP L GE E F+R A G G+G + R+
Sbjct: 6 AAAAAAAAAAAAGGGCGSG-PPPLLLSEGEQQCYSELFARCAGAAGGGPGSGPPEAARV 63
>gi|125625326 RALBP1 associated Eps domain containing 2 isoform 1
[Homo sapiens]
Length = 660
Score = 33.5 bits (75), Expect = 0.50
Identities = 25/59 (42%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 2 AGARAAAAAASAGSSASSGNQPPQELGLGE---LLEEFSRTQYRAKDGSGTGGSKVERI 57
A A AAAAAA+AG SG PP L GE E F+R A G G+G + R+
Sbjct: 6 AAAAAAAAAAAAGGGCGSG-PPPLLLSEGEQQCYSELFARCAGAAGGGPGSGPPEAARV 63
>gi|102469037 jun D proto-oncogene [Homo sapiens]
Length = 347
Score = 32.0 bits (71), Expect = 1.5
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Query: 2 AGARAAAAAASAG--SSASSGNQPPQELGLGELLEE---FSRTQYRAKDGSGTGGS 52
AGA AAAAAA+AG S ++G+ PP EL E ++ A G GG+
Sbjct: 155 AGAAAAAAAAAAGGPSGTATGSAPPGELAPAAAAPEAPVYANLSSYAGGAGGAGGA 210
>gi|20127580 BTB (POZ) domain containing 2 [Homo sapiens]
Length = 525
Score = 31.6 bits (70), Expect = 1.9
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 3 GARAAAAAASAGSSASSGNQPPQELGLGELLEEFSRTQYRAKDGSGTGGSKVER 56
G AAAAAA+A ++A+ G PP G G + + RA++ +G G + ++R
Sbjct: 39 GNAAAAAAAAAAAAAAPGPTPPAPPGPG--TDAQAAGAERAEEAAGPGAAALQR 90
>gi|21361759 myotubularin related protein 8 [Homo sapiens]
Length = 704
Score = 31.6 bits (70), Expect = 1.9
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 6/61 (9%)
Query: 322 DDSGLLVHCISGWDRTPLFISLLRLSLWADGLIHTSLKPTEILYLTVAYDWFLFGHMLVD 381
+ + +LVHC GWDRT S+ A L+ + + L + + +W GH
Sbjct: 330 EKASVLVHCSDGWDRTAQVCSV------ASILLDPFYRTFKGLMILIEKEWISMGHKFSQ 383
Query: 382 R 382
R
Sbjct: 384 R 384
>gi|29788760 diacylglycerol kinase, eta isoform 1 [Homo sapiens]
Length = 1164
Score = 30.4 bits (67), Expect = 4.3
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 2 AGARAAAAAASAGSSASSGNQPPQELGLGELLEEFSRT-QYRAKDGSGTG-----GSKVE 55
AGA +AAASAG S + ++ G +L+ + S + Q R K G S +
Sbjct: 21 AGAAVTSAAASAGPGEDSSDSEAEQEGPQKLIRKVSTSGQIRTKTSIKEGQLLKQTSSFQ 80
Query: 56 RIEKRCLELFGR 67
R +KR +L GR
Sbjct: 81 RWKKRYFKLRGR 92
>gi|29788751 diacylglycerol kinase, eta isoform 2 [Homo sapiens]
Length = 1220
Score = 30.4 bits (67), Expect = 4.3
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 2 AGARAAAAAASAGSSASSGNQPPQELGLGELLEEFSRT-QYRAKDGSGTG-----GSKVE 55
AGA +AAASAG S + ++ G +L+ + S + Q R K G S +
Sbjct: 21 AGAAVTSAAASAGPGEDSSDSEAEQEGPQKLIRKVSTSGQIRTKTSIKEGQLLKQTSSFQ 80
Query: 56 RIEKRCLELFGR 67
R +KR +L GR
Sbjct: 81 RWKKRYFKLRGR 92
>gi|122692281 hypothetical protein LOC645369 [Homo sapiens]
Length = 621
Score = 30.0 bits (66), Expect = 5.6
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 2 AGARAAAAAASAGSSASSGNQPPQELGLGELLEEFSRTQYRAKDGSGTGGS 52
A A AAAAAA++ SS++ PP + L L K G G GGS
Sbjct: 220 AAAAAAAAAAASSSSSAPAAAPPGAIPLNGFLSYVQSRGLELKPG-GCGGS 269
>gi|157364934 fibrosin [Homo sapiens]
Length = 460
Score = 30.0 bits (66), Expect = 5.6
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 452 SSPGATGSFTYEAVELVPAGAPTQAAWLAALSD 484
++PGA G F + + P G PT A LAALS+
Sbjct: 156 AAPGAHGPFLSPSTHIDPFGRPTSFASLAALSN 188
>gi|239735519 SET binding factor 1 [Homo sapiens]
Length = 1893
Score = 29.6 bits (65), Expect = 7.3
Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 6/62 (9%)
Query: 321 DDDSGLLVHCISGWDRTPLFISLLRLSLWADGLIHTSLKPTEILYLTVAYDWFLFGHMLV 380
D S +LV GWD T +SL++L L + E L V +W FGH
Sbjct: 1438 DSGSSVLVGLEDGWDITTQVVSLVQL------LSDPFYRTLEGFRLLVEKEWLSFGHRFS 1491
Query: 381 DR 382
R
Sbjct: 1492 HR 1493
>gi|24497554 homeobox A13 [Homo sapiens]
Length = 388
Score = 29.3 bits (64), Expect = 9.5
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 2 AGARAAAAAASAGSSASSGNQPPQELGLGELLEEFSRTQYRAKDGSG 48
A A AAAAAA+A +++SSG P E ++ S A+ SG
Sbjct: 119 AAAAAAAAAAAAAAASSSGGPGPAGPAGAEAAKQCSPCSAAAQSSSG 165
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.136 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,700,982
Number of Sequences: 37866
Number of extensions: 934556
Number of successful extensions: 3097
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 3022
Number of HSP's gapped (non-prelim): 60
length of query: 538
length of database: 18,247,518
effective HSP length: 107
effective length of query: 431
effective length of database: 14,195,856
effective search space: 6118413936
effective search space used: 6118413936
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.