BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|239749071 PREDICTED: similar to hCG1644697 [Homo sapiens] (194 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|239754510 PREDICTED: similar to hCG1644697 [Homo sapiens] 402 e-113 gi|239749071 PREDICTED: similar to hCG1644697 [Homo sapiens] 402 e-113 gi|239743097 PREDICTED: similar to hCG1644697 [Homo sapiens] 402 e-113 gi|239508749 PREDICTED: similar to hCG1644697 [Homo sapiens] 402 e-113 gi|169215894 PREDICTED: similar to hCG1732289 [Homo sapiens] 33 0.15 gi|169215721 PREDICTED: similar to hCG1732289 [Homo sapiens] 33 0.15 gi|169215507 PREDICTED: similar to hCG1732289 [Homo sapiens] 33 0.15 gi|157743252 pecanex-like 3 [Homo sapiens] 32 0.34 gi|169881239 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked ... 32 0.44 gi|13514809 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked [... 32 0.44 gi|16933542 fibronectin 1 isoform 3 preproprotein [Homo sapiens] 31 0.58 gi|47132557 fibronectin 1 isoform 1 preproprotein [Homo sapiens] 31 0.58 gi|47132555 fibronectin 1 isoform 4 preproprotein [Homo sapiens] 31 0.58 gi|47132553 fibronectin 1 isoform 5 preproprotein [Homo sapiens] 31 0.58 gi|47132551 fibronectin 1 isoform 2 preproprotein [Homo sapiens] 31 0.58 gi|47132549 fibronectin 1 isoform 6 preproprotein [Homo sapiens] 31 0.58 gi|23510348 TRAF and TNF receptor-associated protein [Homo sapiens] 31 0.76 gi|7019483 procollagen C-endopeptidase enhancer 2 [Homo sapiens] 31 0.76 gi|22547204 hairless protein isoform a [Homo sapiens] 30 0.99 gi|22547207 hairless protein isoform b [Homo sapiens] 30 0.99 gi|7656950 voltage-dependent calcium channel gamma-5 subunit iso... 30 0.99 gi|239756877 PREDICTED: hypothetical protein [Homo sapiens] 30 1.3 gi|239751371 PREDICTED: hypothetical protein XP_002347821 [Homo ... 30 1.3 gi|239745880 PREDICTED: hypothetical protein XP_002343571 [Homo ... 30 1.3 gi|118572606 hemicentin 1 [Homo sapiens] 30 1.3 gi|87196351 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3 [Homo... 30 1.7 gi|198041703 solute carrier family 22 (organic cation transporte... 30 1.7 gi|110431348 deleted in colorectal carcinoma [Homo sapiens] 29 2.9 gi|222418615 integrin alpha 7 isoform 3 [Homo sapiens] 29 2.9 gi|222418613 integrin alpha 7 isoform 1 precursor [Homo sapiens] 29 2.9 >gi|239754510 PREDICTED: similar to hCG1644697 [Homo sapiens] Length = 194 Score = 402 bits (1034), Expect = e-113 Identities = 194/194 (100%), Positives = 194/194 (100%) Query: 1 MDAAVRPLGWGREQELWTPAPQLWFPLGIQALSGCRSSREPSACPTAGLGLGLSGGRDSA 60 MDAAVRPLGWGREQELWTPAPQLWFPLGIQALSGCRSSREPSACPTAGLGLGLSGGRDSA Sbjct: 1 MDAAVRPLGWGREQELWTPAPQLWFPLGIQALSGCRSSREPSACPTAGLGLGLSGGRDSA 60 Query: 61 LTSGATQSGFVSFRGSRLTGERKGVGTEGHPGFYERRHQCKQSVNVQISSCALAALRSFP 120 LTSGATQSGFVSFRGSRLTGERKGVGTEGHPGFYERRHQCKQSVNVQISSCALAALRSFP Sbjct: 61 LTSGATQSGFVSFRGSRLTGERKGVGTEGHPGFYERRHQCKQSVNVQISSCALAALRSFP 120 Query: 121 IELGWEFHPRTYSPSQRFRHLSHRKTGRREAGNERRTLAELTVAPRSSCPSDSCRLGSPR 180 IELGWEFHPRTYSPSQRFRHLSHRKTGRREAGNERRTLAELTVAPRSSCPSDSCRLGSPR Sbjct: 121 IELGWEFHPRTYSPSQRFRHLSHRKTGRREAGNERRTLAELTVAPRSSCPSDSCRLGSPR 180 Query: 181 EELSSFLVPEDAGN 194 EELSSFLVPEDAGN Sbjct: 181 EELSSFLVPEDAGN 194 >gi|239749071 PREDICTED: similar to hCG1644697 [Homo sapiens] Length = 194 Score = 402 bits (1034), Expect = e-113 Identities = 194/194 (100%), Positives = 194/194 (100%) Query: 1 MDAAVRPLGWGREQELWTPAPQLWFPLGIQALSGCRSSREPSACPTAGLGLGLSGGRDSA 60 MDAAVRPLGWGREQELWTPAPQLWFPLGIQALSGCRSSREPSACPTAGLGLGLSGGRDSA Sbjct: 1 MDAAVRPLGWGREQELWTPAPQLWFPLGIQALSGCRSSREPSACPTAGLGLGLSGGRDSA 60 Query: 61 LTSGATQSGFVSFRGSRLTGERKGVGTEGHPGFYERRHQCKQSVNVQISSCALAALRSFP 120 LTSGATQSGFVSFRGSRLTGERKGVGTEGHPGFYERRHQCKQSVNVQISSCALAALRSFP Sbjct: 61 LTSGATQSGFVSFRGSRLTGERKGVGTEGHPGFYERRHQCKQSVNVQISSCALAALRSFP 120 Query: 121 IELGWEFHPRTYSPSQRFRHLSHRKTGRREAGNERRTLAELTVAPRSSCPSDSCRLGSPR 180 IELGWEFHPRTYSPSQRFRHLSHRKTGRREAGNERRTLAELTVAPRSSCPSDSCRLGSPR Sbjct: 121 IELGWEFHPRTYSPSQRFRHLSHRKTGRREAGNERRTLAELTVAPRSSCPSDSCRLGSPR 180 Query: 181 EELSSFLVPEDAGN 194 EELSSFLVPEDAGN Sbjct: 181 EELSSFLVPEDAGN 194 >gi|239743097 PREDICTED: similar to hCG1644697 [Homo sapiens] Length = 194 Score = 402 bits (1034), Expect = e-113 Identities = 194/194 (100%), Positives = 194/194 (100%) Query: 1 MDAAVRPLGWGREQELWTPAPQLWFPLGIQALSGCRSSREPSACPTAGLGLGLSGGRDSA 60 MDAAVRPLGWGREQELWTPAPQLWFPLGIQALSGCRSSREPSACPTAGLGLGLSGGRDSA Sbjct: 1 MDAAVRPLGWGREQELWTPAPQLWFPLGIQALSGCRSSREPSACPTAGLGLGLSGGRDSA 60 Query: 61 LTSGATQSGFVSFRGSRLTGERKGVGTEGHPGFYERRHQCKQSVNVQISSCALAALRSFP 120 LTSGATQSGFVSFRGSRLTGERKGVGTEGHPGFYERRHQCKQSVNVQISSCALAALRSFP Sbjct: 61 LTSGATQSGFVSFRGSRLTGERKGVGTEGHPGFYERRHQCKQSVNVQISSCALAALRSFP 120 Query: 121 IELGWEFHPRTYSPSQRFRHLSHRKTGRREAGNERRTLAELTVAPRSSCPSDSCRLGSPR 180 IELGWEFHPRTYSPSQRFRHLSHRKTGRREAGNERRTLAELTVAPRSSCPSDSCRLGSPR Sbjct: 121 IELGWEFHPRTYSPSQRFRHLSHRKTGRREAGNERRTLAELTVAPRSSCPSDSCRLGSPR 180 Query: 181 EELSSFLVPEDAGN 194 EELSSFLVPEDAGN Sbjct: 181 EELSSFLVPEDAGN 194 >gi|239508749 PREDICTED: similar to hCG1644697 [Homo sapiens] Length = 194 Score = 402 bits (1034), Expect = e-113 Identities = 194/194 (100%), Positives = 194/194 (100%) Query: 1 MDAAVRPLGWGREQELWTPAPQLWFPLGIQALSGCRSSREPSACPTAGLGLGLSGGRDSA 60 MDAAVRPLGWGREQELWTPAPQLWFPLGIQALSGCRSSREPSACPTAGLGLGLSGGRDSA Sbjct: 1 MDAAVRPLGWGREQELWTPAPQLWFPLGIQALSGCRSSREPSACPTAGLGLGLSGGRDSA 60 Query: 61 LTSGATQSGFVSFRGSRLTGERKGVGTEGHPGFYERRHQCKQSVNVQISSCALAALRSFP 120 LTSGATQSGFVSFRGSRLTGERKGVGTEGHPGFYERRHQCKQSVNVQISSCALAALRSFP Sbjct: 61 LTSGATQSGFVSFRGSRLTGERKGVGTEGHPGFYERRHQCKQSVNVQISSCALAALRSFP 120 Query: 121 IELGWEFHPRTYSPSQRFRHLSHRKTGRREAGNERRTLAELTVAPRSSCPSDSCRLGSPR 180 IELGWEFHPRTYSPSQRFRHLSHRKTGRREAGNERRTLAELTVAPRSSCPSDSCRLGSPR Sbjct: 121 IELGWEFHPRTYSPSQRFRHLSHRKTGRREAGNERRTLAELTVAPRSSCPSDSCRLGSPR 180 Query: 181 EELSSFLVPEDAGN 194 EELSSFLVPEDAGN Sbjct: 181 EELSSFLVPEDAGN 194 >gi|169215894 PREDICTED: similar to hCG1732289 [Homo sapiens] Length = 370 Score = 33.1 bits (74), Expect = 0.15 Identities = 26/88 (29%), Positives = 33/88 (37%), Gaps = 6/88 (6%) Query: 17 WTPAPQLWFPLGIQA------LSGCRSSREPSACPTAGLGLGLSGGRDSALTSGATQSGF 70 W P P PLG +A C+ GLG GL GGR ++ GF Sbjct: 119 WPPDPAGTQPLGNRAPLQLLRRELCQGQEAFVQQSQVGLGEGLWGGRKLRNSTPGGPEGF 178 Query: 71 VSFRGSRLTGERKGVGTEGHPGFYERRH 98 + G R G+ G GHP + H Sbjct: 179 IREGGLRAVGQWAQRGGTGHPADAAQAH 206 >gi|169215721 PREDICTED: similar to hCG1732289 [Homo sapiens] Length = 391 Score = 33.1 bits (74), Expect = 0.15 Identities = 26/88 (29%), Positives = 33/88 (37%), Gaps = 6/88 (6%) Query: 17 WTPAPQLWFPLGIQA------LSGCRSSREPSACPTAGLGLGLSGGRDSALTSGATQSGF 70 W P P PLG +A C+ GLG GL GGR ++ GF Sbjct: 140 WPPDPAGTQPLGNRAPLQLLRRELCQGQEAFVQQSQVGLGEGLWGGRKLRNSTPGGPEGF 199 Query: 71 VSFRGSRLTGERKGVGTEGHPGFYERRH 98 + G R G+ G GHP + H Sbjct: 200 IREGGLRAVGQWAQRGGTGHPADAAQAH 227 >gi|169215507 PREDICTED: similar to hCG1732289 [Homo sapiens] Length = 490 Score = 33.1 bits (74), Expect = 0.15 Identities = 26/88 (29%), Positives = 33/88 (37%), Gaps = 6/88 (6%) Query: 17 WTPAPQLWFPLGIQA------LSGCRSSREPSACPTAGLGLGLSGGRDSALTSGATQSGF 70 W P P PLG +A C+ GLG GL GGR ++ GF Sbjct: 239 WPPDPAGTQPLGNRAPLQLLRRELCQGQEAFVQQSQVGLGEGLWGGRKLRNSTPGGPEGF 298 Query: 71 VSFRGSRLTGERKGVGTEGHPGFYERRH 98 + G R G+ G GHP + H Sbjct: 299 IREGGLRAVGQWAQRGGTGHPADAAQAH 326 >gi|157743252 pecanex-like 3 [Homo sapiens] Length = 2034 Score = 32.0 bits (71), Expect = 0.34 Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 6/57 (10%) Query: 134 PSQRFRHLSHRKTGRREAGN----ERRTLAELTVAPRSSCPSDSCRLGSPREELSSF 186 P + S R+ RR AG +RR E T P+ + SDSC G+ RE LSSF Sbjct: 259 PDRALVRTSSRREQRRGAGGYQPLDRRGSGEPT--PQKAGSSDSCFSGTDRETLSSF 313 >gi|169881239 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked [Homo sapiens] Length = 660 Score = 31.6 bits (70), Expect = 0.44 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 6/46 (13%) Query: 55 GGRDSALTSGATQSGFVSFRGSRLT------GERKGVGTEGHPGFY 94 G RD +SG++ SGF + RGS G +G G G+ GFY Sbjct: 596 GARDYRQSSGSSSSGFGASRGSSSRSGGGGYGNSRGFGGGGYGGFY 641 >gi|13514809 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked [Homo sapiens] Length = 660 Score = 31.6 bits (70), Expect = 0.44 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 6/46 (13%) Query: 55 GGRDSALTSGATQSGFVSFRGSRLT------GERKGVGTEGHPGFY 94 G RD +SG++ SGF + RGS G +G G G+ GFY Sbjct: 596 GARDYRQSSGSSSSGFGASRGSSSRSGGGGYGNSRGFGGGGYGGFY 641 >gi|16933542 fibronectin 1 isoform 3 preproprotein [Homo sapiens] Length = 2355 Score = 31.2 bits (69), Expect = 0.58 Identities = 16/53 (30%), Positives = 28/53 (52%) Query: 17 WTPAPQLWFPLGIQALSGCRSSREPSACPTAGLGLGLSGGRDSALTSGATQSG 69 WTPAP++ F LG++ G + RE ++ + + GL+ G + T + G Sbjct: 1107 WTPAPRIGFKLGVRPSQGGEAPREVTSDSGSIVVSGLTPGVEYVYTIQVLRDG 1159 >gi|47132557 fibronectin 1 isoform 1 preproprotein [Homo sapiens] Length = 2477 Score = 31.2 bits (69), Expect = 0.58 Identities = 16/53 (30%), Positives = 28/53 (52%) Query: 17 WTPAPQLWFPLGIQALSGCRSSREPSACPTAGLGLGLSGGRDSALTSGATQSG 69 WTPAP++ F LG++ G + RE ++ + + GL+ G + T + G Sbjct: 1107 WTPAPRIGFKLGVRPSQGGEAPREVTSDSGSIVVSGLTPGVEYVYTIQVLRDG 1159 >gi|47132555 fibronectin 1 isoform 4 preproprotein [Homo sapiens] Length = 2330 Score = 31.2 bits (69), Expect = 0.58 Identities = 16/53 (30%), Positives = 28/53 (52%) Query: 17 WTPAPQLWFPLGIQALSGCRSSREPSACPTAGLGLGLSGGRDSALTSGATQSG 69 WTPAP++ F LG++ G + RE ++ + + GL+ G + T + G Sbjct: 1107 WTPAPRIGFKLGVRPSQGGEAPREVTSDSGSIVVSGLTPGVEYVYTIQVLRDG 1159 >gi|47132553 fibronectin 1 isoform 5 preproprotein [Homo sapiens] Length = 2296 Score = 31.2 bits (69), Expect = 0.58 Identities = 16/53 (30%), Positives = 28/53 (52%) Query: 17 WTPAPQLWFPLGIQALSGCRSSREPSACPTAGLGLGLSGGRDSALTSGATQSG 69 WTPAP++ F LG++ G + RE ++ + + GL+ G + T + G Sbjct: 1107 WTPAPRIGFKLGVRPSQGGEAPREVTSDSGSIVVSGLTPGVEYVYTIQVLRDG 1159 >gi|47132551 fibronectin 1 isoform 2 preproprotein [Homo sapiens] Length = 2421 Score = 31.2 bits (69), Expect = 0.58 Identities = 16/53 (30%), Positives = 28/53 (52%) Query: 17 WTPAPQLWFPLGIQALSGCRSSREPSACPTAGLGLGLSGGRDSALTSGATQSG 69 WTPAP++ F LG++ G + RE ++ + + GL+ G + T + G Sbjct: 1107 WTPAPRIGFKLGVRPSQGGEAPREVTSDSGSIVVSGLTPGVEYVYTIQVLRDG 1159 >gi|47132549 fibronectin 1 isoform 6 preproprotein [Homo sapiens] Length = 2176 Score = 31.2 bits (69), Expect = 0.58 Identities = 16/53 (30%), Positives = 28/53 (52%) Query: 17 WTPAPQLWFPLGIQALSGCRSSREPSACPTAGLGLGLSGGRDSALTSGATQSG 69 WTPAP++ F LG++ G + RE ++ + + GL+ G + T + G Sbjct: 1107 WTPAPRIGFKLGVRPSQGGEAPREVTSDSGSIVVSGLTPGVEYVYTIQVLRDG 1159 >gi|23510348 TRAF and TNF receptor-associated protein [Homo sapiens] Length = 362 Score = 30.8 bits (68), Expect = 0.76 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 2/52 (3%) Query: 75 GSRLTGERKGVGTEGHPGFYERRHQCKQSVNVQISSCALAALRSFPIELGWE 126 GS L G R+ EG P +RR C + +V +SC A + F E WE Sbjct: 4 GSCLEGGREAAEEEGEPEVKKRRLLCVEFASV--ASCDAAVAQCFLAENDWE 53 >gi|7019483 procollagen C-endopeptidase enhancer 2 [Homo sapiens] Length = 415 Score = 30.8 bits (68), Expect = 0.76 Identities = 15/48 (31%), Positives = 21/48 (43%) Query: 75 GSRLTGERKGVGTEGHPGFYERRHQCKQSVNVQISSCALAALRSFPIE 122 G LTGE +G+EG PG Y +C + V + R +E Sbjct: 34 GGILTGESGFIGSEGFPGVYPPNSKCTWKITVPEGKVVVLNFRFIDLE 81 >gi|22547204 hairless protein isoform a [Homo sapiens] Length = 1189 Score = 30.4 bits (67), Expect = 0.99 Identities = 33/139 (23%), Positives = 53/139 (38%), Gaps = 17/139 (12%) Query: 44 CPTAGLGLGLSGGRDSALTSGATQSGFVSFRGSRLTGERKGVGTEGHPGFYERRHQCKQS 103 CP L ++ GR + ++GF T E GH C Sbjct: 614 CPRCSHRLCVACGRVAGTGRAREKAGFQEQSAEECTQEA------GHAA-------CSLM 660 Query: 104 VNVQISSCALAALRSFPIELGWEFHPRTYSPSQRFRHLSHRKTGRREAGNERRTLAELTV 163 + +SS ALA L + ++ +F R + P Q R +AG ++ + + Sbjct: 661 LTQFVSSQALAELSTAMHQVWVKFDIRGHCPCQA----DARVWAPGDAGQQKESTQKTPP 716 Query: 164 APRSSCPSDSCRLGSPREE 182 P+ SC D+ R S +EE Sbjct: 717 TPQPSCNGDTHRTKSIKEE 735 >gi|22547207 hairless protein isoform b [Homo sapiens] Length = 1134 Score = 30.4 bits (67), Expect = 0.99 Identities = 33/139 (23%), Positives = 53/139 (38%), Gaps = 17/139 (12%) Query: 44 CPTAGLGLGLSGGRDSALTSGATQSGFVSFRGSRLTGERKGVGTEGHPGFYERRHQCKQS 103 CP L ++ GR + ++GF T E GH C Sbjct: 614 CPRCSHRLCVACGRVAGTGRAREKAGFQEQSAEECTQEA------GHAA-------CSLM 660 Query: 104 VNVQISSCALAALRSFPIELGWEFHPRTYSPSQRFRHLSHRKTGRREAGNERRTLAELTV 163 + +SS ALA L + ++ +F R + P Q R +AG ++ + + Sbjct: 661 LTQFVSSQALAELSTAMHQVWVKFDIRGHCPCQA----DARVWAPGDAGQQKESTQKTPP 716 Query: 164 APRSSCPSDSCRLGSPREE 182 P+ SC D+ R S +EE Sbjct: 717 TPQPSCNGDTHRTKSIKEE 735 >gi|7656950 voltage-dependent calcium channel gamma-5 subunit isoform b [Homo sapiens] Length = 296 Score = 30.4 bits (67), Expect = 0.99 Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 11/48 (22%) Query: 9 GWGRE---QELWTPAPQLWFP-----LGIQALSG---CRSSREPSACP 45 GWGR Q WTP L+FP + + LSG R S P +CP Sbjct: 214 GWGRRDIPQPFWTPDHPLYFPSSSQNVSLSYLSGSPPARMSPGPCSCP 261 >gi|239756877 PREDICTED: hypothetical protein [Homo sapiens] Length = 140 Score = 30.0 bits (66), Expect = 1.3 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 5/60 (8%) Query: 129 PRTYSPSQRFRHLSHRKTGRREAGNERR----TLAELTVAPRSSCPSDSCRLGSPREELS 184 PRT + R SH + RR +G RR T + APR+ C + + R SPR S Sbjct: 29 PRTRG-TPRSAQSSHPGSSRRRSGTRRRRPPRTAPTCSGAPRTRCTACTARSRSPRRRTS 87 >gi|239751371 PREDICTED: hypothetical protein XP_002347821 [Homo sapiens] Length = 140 Score = 30.0 bits (66), Expect = 1.3 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 5/60 (8%) Query: 129 PRTYSPSQRFRHLSHRKTGRREAGNERR----TLAELTVAPRSSCPSDSCRLGSPREELS 184 PRT + R SH + RR +G RR T + APR+ C + + R SPR S Sbjct: 29 PRTRG-TPRSAQSSHPGSSRRRSGTRRRRPPRTAPTCSGAPRTRCTACTARSRSPRRRTS 87 >gi|239745880 PREDICTED: hypothetical protein XP_002343571 [Homo sapiens] Length = 140 Score = 30.0 bits (66), Expect = 1.3 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 5/60 (8%) Query: 129 PRTYSPSQRFRHLSHRKTGRREAGNERR----TLAELTVAPRSSCPSDSCRLGSPREELS 184 PRT + R SH + RR +G RR T + APR+ C + + R SPR S Sbjct: 29 PRTRG-TPRSAQSSHPGSSRRRSGTRRRRPPRTAPTCSGAPRTRCTACTARSRSPRRRTS 87 >gi|118572606 hemicentin 1 [Homo sapiens] Length = 5635 Score = 30.0 bits (66), Expect = 1.3 Identities = 14/42 (33%), Positives = 19/42 (45%) Query: 132 YSPSQRFRHLSHRKTGRREAGNERRTLAELTVAPRSSCPSDS 173 Y P Q +R SH + E N R +L+ R +CP S Sbjct: 5382 YQPQQHYRQYSHLYSSYSEYRNSRTSLSRTRRTIRKTCPEGS 5423 >gi|87196351 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3 [Homo sapiens] Length = 662 Score = 29.6 bits (65), Expect = 1.7 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 6/46 (13%) Query: 55 GGRDSALTSGATQSGFVSFRGSRLT------GERKGVGTEGHPGFY 94 G RD +SGA+ S F S R S G +G G G+ GFY Sbjct: 598 GARDYRQSSGASSSSFSSSRASSSRSGGGGHGSSRGFGGGGYGGFY 643 >gi|198041703 solute carrier family 22 (organic cation transporter), member 18 antisense [Homo sapiens] Length = 253 Score = 29.6 bits (65), Expect = 1.7 Identities = 13/20 (65%), Positives = 14/20 (70%) Query: 70 FVSFRGSRLTGERKGVGTEG 89 F RGSRLTG RKG G+ G Sbjct: 64 FCRMRGSRLTGGRKGFGSSG 83 >gi|110431348 deleted in colorectal carcinoma [Homo sapiens] Length = 1447 Score = 28.9 bits (63), Expect = 2.9 Identities = 25/97 (25%), Positives = 40/97 (41%), Gaps = 3/97 (3%) Query: 74 RGSRLTGERKGVGTEGHPGFYERRHQCKQSVNVQISSCALAALRSFPIELGWEFHPRTYS 133 R + G+RKG + P H+ + N++ S A R PI+ + P ++S Sbjct: 1133 RATHSAGKRKGSQKDLRPPDLWIHHEEMEMKNIEKPSGTDPAGRDSPIQSCQDLTPVSHS 1192 Query: 134 PSQR---FRHLSHRKTGRREAGNERRTLAELTVAPRS 167 S+ + SH EAG+ TL A R+ Sbjct: 1193 QSETQLGSKSTSHSGQDTEEAGSSMSTLERSLAARRA 1229 >gi|222418615 integrin alpha 7 isoform 3 [Homo sapiens] Length = 1044 Score = 28.9 bits (63), Expect = 2.9 Identities = 22/81 (27%), Positives = 31/81 (38%) Query: 88 EGHPGFYERRHQCKQSVNVQISSCALAALRSFPIELGWEFHPRTYSPSQRFRHLSHRKTG 147 EG P +E+ C+Q S + L P W+ R +Q L+H G Sbjct: 88 EGRPQGHEQFGFCQQGTAAAFSPDSHYLLFGAPGTYNWKGTARVELCAQGSADLAHLDDG 147 Query: 148 RREAGNERRTLAELTVAPRSS 168 EAG E+ L P +S Sbjct: 148 PYEAGGEKEQDPRLIPVPANS 168 >gi|222418613 integrin alpha 7 isoform 1 precursor [Homo sapiens] Length = 1141 Score = 28.9 bits (63), Expect = 2.9 Identities = 22/81 (27%), Positives = 31/81 (38%) Query: 88 EGHPGFYERRHQCKQSVNVQISSCALAALRSFPIELGWEFHPRTYSPSQRFRHLSHRKTG 147 EG P +E+ C+Q S + L P W+ R +Q L+H G Sbjct: 185 EGRPQGHEQFGFCQQGTAAAFSPDSHYLLFGAPGTYNWKGTARVELCAQGSADLAHLDDG 244 Query: 148 RREAGNERRTLAELTVAPRSS 168 EAG E+ L P +S Sbjct: 245 PYEAGGEKEQDPRLIPVPANS 265 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.317 0.133 0.419 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 8,550,993 Number of Sequences: 37866 Number of extensions: 403100 Number of successful extensions: 1305 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 22 Number of HSP's successfully gapped in prelim test: 18 Number of HSP's that attempted gapping in prelim test: 1273 Number of HSP's gapped (non-prelim): 50 length of query: 194 length of database: 18,247,518 effective HSP length: 97 effective length of query: 97 effective length of database: 14,574,516 effective search space: 1413728052 effective search space used: 1413728052 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.