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Search of human proteins with 239748533
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239748533 PREDICTED: hypothetical protein XP_002346719 [Homo
sapiens]
(189 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239754002 PREDICTED: similar to Transmembrane protein ENSP000... 379 e-106
gi|239748533 PREDICTED: hypothetical protein XP_002346719 [Homo ... 379 e-106
gi|242332527 hypothetical protein LOC65250 [Homo sapiens] 328 2e-90
gi|119372317 xin actin-binding repeat containing 2 isoform 1 [Ho... 31 0.56
gi|222418587 hypothetical protein LOC57495 [Homo sapiens] 31 0.73
gi|12545408 RAS p21 protein activator 2 [Homo sapiens] 30 1.2
gi|197333737 guanylate-binding protein 5 [Homo sapiens] 29 2.8
gi|16418425 guanylate-binding protein 5 [Homo sapiens] 29 2.8
gi|194306660 coiled-coil domain containing 77 isoform b [Homo sa... 28 3.6
gi|194306658 coiled-coil domain containing 77 isoform b [Homo sa... 28 3.6
gi|14150165 coiled-coil domain containing 77 isoform a [Homo sap... 28 3.6
gi|194306535 coiled-coil domain containing 77 isoform b [Homo sa... 28 3.6
gi|21483182 zinc finger with KRAB and SCAN domains 5 [Homo sapiens] 28 3.6
gi|11036642 zinc finger with KRAB and SCAN domains 5 [Homo sapiens] 28 3.6
gi|225735557 nuclear factor erythroid 2-like 3 [Homo sapiens] 28 4.7
gi|208431757 KLRAQ motif containing 1 isoform 3 [Homo sapiens] 28 4.7
gi|24308420 KLRAQ motif containing 1 isoform 2 [Homo sapiens] 28 4.7
gi|208431754 KLRAQ motif containing 1 isoform 1 [Homo sapiens] 28 4.7
gi|122937388 MAX gene associated [Homo sapiens] 28 6.1
gi|116805342 human immunodeficiency virus type I enhancer bindin... 27 8.0
>gi|239754002 PREDICTED: similar to Transmembrane protein
ENSP00000382582 [Homo sapiens]
Length = 189
Score = 379 bits (973), Expect = e-106
Identities = 189/189 (100%), Positives = 189/189 (100%)
Query: 1 MRQRFSIKAHSRLPYLVISDGYMVTTLRFLDSLSPSVHMRSLLLDSTQRLEKIYQSVILS 60
MRQRFSIKAHSRLPYLVISDGYMVTTLRFLDSLSPSVHMRSLLLDSTQRLEKIYQSVILS
Sbjct: 1 MRQRFSIKAHSRLPYLVISDGYMVTTLRFLDSLSPSVHMRSLLLDSTQRLEKIYQSVILS 60
Query: 61 KPKGKGLNLRSLNSLRSSLLEHQGNESSADFTVPKFLQAEETINENAADFQDFEAEETNE 120
KPKGKGLNLRSLNSLRSSLLEHQGNESSADFTVPKFLQAEETINENAADFQDFEAEETNE
Sbjct: 61 KPKGKGLNLRSLNSLRSSLLEHQGNESSADFTVPKFLQAEETINENAADFQDFEAEETNE 120
Query: 121 GRHFPDNLCPFWNKRDDVLCSSMKEGRLEFASMFDTIHAKDDTKAQDIMHGYFVSFNFFI 180
GRHFPDNLCPFWNKRDDVLCSSMKEGRLEFASMFDTIHAKDDTKAQDIMHGYFVSFNFFI
Sbjct: 121 GRHFPDNLCPFWNKRDDVLCSSMKEGRLEFASMFDTIHAKDDTKAQDIMHGYFVSFNFFI 180
Query: 181 SVYQSIIGI 189
SVYQSIIGI
Sbjct: 181 SVYQSIIGI 189
>gi|239748533 PREDICTED: hypothetical protein XP_002346719 [Homo
sapiens]
Length = 189
Score = 379 bits (973), Expect = e-106
Identities = 189/189 (100%), Positives = 189/189 (100%)
Query: 1 MRQRFSIKAHSRLPYLVISDGYMVTTLRFLDSLSPSVHMRSLLLDSTQRLEKIYQSVILS 60
MRQRFSIKAHSRLPYLVISDGYMVTTLRFLDSLSPSVHMRSLLLDSTQRLEKIYQSVILS
Sbjct: 1 MRQRFSIKAHSRLPYLVISDGYMVTTLRFLDSLSPSVHMRSLLLDSTQRLEKIYQSVILS 60
Query: 61 KPKGKGLNLRSLNSLRSSLLEHQGNESSADFTVPKFLQAEETINENAADFQDFEAEETNE 120
KPKGKGLNLRSLNSLRSSLLEHQGNESSADFTVPKFLQAEETINENAADFQDFEAEETNE
Sbjct: 61 KPKGKGLNLRSLNSLRSSLLEHQGNESSADFTVPKFLQAEETINENAADFQDFEAEETNE 120
Query: 121 GRHFPDNLCPFWNKRDDVLCSSMKEGRLEFASMFDTIHAKDDTKAQDIMHGYFVSFNFFI 180
GRHFPDNLCPFWNKRDDVLCSSMKEGRLEFASMFDTIHAKDDTKAQDIMHGYFVSFNFFI
Sbjct: 121 GRHFPDNLCPFWNKRDDVLCSSMKEGRLEFASMFDTIHAKDDTKAQDIMHGYFVSFNFFI 180
Query: 181 SVYQSIIGI 189
SVYQSIIGI
Sbjct: 181 SVYQSIIGI 189
>gi|242332527 hypothetical protein LOC65250 [Homo sapiens]
Length = 3197
Score = 328 bits (840), Expect = 2e-90
Identities = 163/167 (97%), Positives = 165/167 (98%)
Query: 1 MRQRFSIKAHSRLPYLVISDGYMVTTLRFLDSLSPSVHMRSLLLDSTQRLEKIYQSVILS 60
MRQRFSIKAHSRLPYLVISDGYMVTTLRFLDSLSPSVHMRSLLLDSTQRLEKIYQSVILS
Sbjct: 397 MRQRFSIKAHSRLPYLVISDGYMVTTLRFLDSLSPSVHMRSLLLDSTQRLEKIYQSVILS 456
Query: 61 KPKGKGLNLRSLNSLRSSLLEHQGNESSADFTVPKFLQAEETINENAADFQDFEAEETNE 120
KPKGKGLNLRSLNSLRSSLLEHQGNESSADFTVPKFLQAEETINENAADFQDFEAEETNE
Sbjct: 457 KPKGKGLNLRSLNSLRSSLLEHQGNESSADFTVPKFLQAEETINENAADFQDFEAEETNE 516
Query: 121 GRHFPDNLCPFWNKRDDVLCSSMKEGRLEFASMFDTIHAKDDTKAQD 167
GRHFPDNLCPFWNKRDDVLCSSMKEGRLEFASMFDTIHAKDD++ D
Sbjct: 517 GRHFPDNLCPFWNKRDDVLCSSMKEGRLEFASMFDTIHAKDDSEETD 563
>gi|119372317 xin actin-binding repeat containing 2 isoform 1 [Homo
sapiens]
Length = 3549
Score = 31.2 bits (69), Expect = 0.56
Identities = 34/139 (24%), Positives = 60/139 (43%), Gaps = 11/139 (7%)
Query: 41 SLLLDSTQRLEKIYQSVILSKPKGKGLNLRSLNSLRSSLLEHQGNESSADFTVPKFLQAE 100
SL + ++ I + + S K + S SS+ E Q ++ + +FL+
Sbjct: 2892 SLQEEKCLEVKGIQEKQVFSNTKDSKQEITQNKSFFSSVKESQRDDGKGALNIVEFLRKR 2951
Query: 101 ETINENAADFQDFEAEETNEG-RHFPD--NLCPFW----NKRDDVLCSSMKEGRLEFASM 153
E + + + + FEAE G + F N P W +KR+ + +M E LE
Sbjct: 2952 EELQQILSRVKQFEAEPNKSGLKTFQTLLNTIPGWLISEDKREYAVHIAM-ENNLEKVKE 3010
Query: 154 FDTIHAKDDTKAQDIMHGY 172
+ H K T+A+D++ Y
Sbjct: 3011 -EITHIK--TQAEDMLVSY 3026
>gi|222418587 hypothetical protein LOC57495 [Homo sapiens]
Length = 1742
Score = 30.8 bits (68), Expect = 0.73
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 8/83 (9%)
Query: 24 VTTLRFLDSLSPSVHMRSLLLDSTQRLEKIYQSVILSKPKGKGLNLRSLNSLRSSLLEHQ 83
V +RFL + S +R+LLL ++L Y+ ++ S PK + L L +LL
Sbjct: 448 VVIVRFLGTTDMSSDLRTLLLSVCEQLAVNYRCLVQSYPK----KIHDLCDLFINLL--- 500
Query: 84 GNESSADFTVPKFLQAEETINEN 106
NESS + A E ++EN
Sbjct: 501 -NESSLQRPLVIIFDALEQLSEN 522
>gi|12545408 RAS p21 protein activator 2 [Homo sapiens]
Length = 849
Score = 30.0 bits (66), Expect = 1.2
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 13/141 (9%)
Query: 20 DGYMVTTLRFLDSLSPSVHMRSLLLDSTQRLEKIYQSVILSKPKG------KGLNLRSLN 73
+GY++ +FLD +S + S T + + + + +G K R
Sbjct: 576 EGYIIAVKKFLDEISSTETKES---SGTSEPVHLKEGEMYKRAQGRTRIGKKNFKKRWFC 632
Query: 74 SLRSSLLEHQGNESSADFTVP-KFLQAEETINENAADFQD-FEAEETNEGRHFPDNLCPF 131
L H+ A +T+P K + A E + E++ + ++ F+ T + + N C
Sbjct: 633 LTSRELTYHKQPGKDAIYTIPVKNILAVEKLEESSFNKKNMFQVIHTEKPLYVQANNCVE 692
Query: 132 WNKRDDVLC--SSMKEGRLEF 150
N+ DVLC S + RL F
Sbjct: 693 ANEWIDVLCRVSRCNQNRLSF 713
>gi|197333737 guanylate-binding protein 5 [Homo sapiens]
Length = 586
Score = 28.9 bits (63), Expect = 2.8
Identities = 17/69 (24%), Positives = 34/69 (49%)
Query: 36 SVHMRSLLLDSTQRLEKIYQSVILSKPKGKGLNLRSLNSLRSSLLEHQGNESSADFTVPK 95
S + +LL D LE+ + I SKP G L ++ L++ A+ + K
Sbjct: 402 SDYCSALLKDIFGPLEEAVKQGIYSKPGGHNLFIQKTEELKAKYYREPRKGIQAEEVLQK 461
Query: 96 FLQAEETIN 104
+L+++E+++
Sbjct: 462 YLKSKESVS 470
>gi|16418425 guanylate-binding protein 5 [Homo sapiens]
Length = 586
Score = 28.9 bits (63), Expect = 2.8
Identities = 17/69 (24%), Positives = 34/69 (49%)
Query: 36 SVHMRSLLLDSTQRLEKIYQSVILSKPKGKGLNLRSLNSLRSSLLEHQGNESSADFTVPK 95
S + +LL D LE+ + I SKP G L ++ L++ A+ + K
Sbjct: 402 SDYCSALLKDIFGPLEEAVKQGIYSKPGGHNLFIQKTEELKAKYYREPRKGIQAEEVLQK 461
Query: 96 FLQAEETIN 104
+L+++E+++
Sbjct: 462 YLKSKESVS 470
>gi|194306660 coiled-coil domain containing 77 isoform b [Homo
sapiens]
Length = 456
Score = 28.5 bits (62), Expect = 3.6
Identities = 24/119 (20%), Positives = 48/119 (40%), Gaps = 8/119 (6%)
Query: 39 MRSLLLDSTQRLEKIYQSVILSKPKGKGLNLRSLNSLRSSLLEHQGNESSADFTVPKFLQ 98
+++L+L ++ + LS+ + +GL L ++HQ N++
Sbjct: 186 IQTLILQVEALQAQLGEQTKLSREQIEGLIEDRRIHLEEIQVQHQRNQNKIKELTKNLHH 245
Query: 99 AEETINENAADFQDFEAEETNEGRHFPDNLCPFWNKRDDVLCSSMKEGRLEFASMFDTI 157
+E + E+ DF +E N+ + W D L S +K+ R++ D I
Sbjct: 246 TQELLYESTKDFLQLRSENQNKEKS--------WMLEKDNLMSKIKQYRVQCKKKEDKI 296
>gi|194306658 coiled-coil domain containing 77 isoform b [Homo
sapiens]
Length = 456
Score = 28.5 bits (62), Expect = 3.6
Identities = 24/119 (20%), Positives = 48/119 (40%), Gaps = 8/119 (6%)
Query: 39 MRSLLLDSTQRLEKIYQSVILSKPKGKGLNLRSLNSLRSSLLEHQGNESSADFTVPKFLQ 98
+++L+L ++ + LS+ + +GL L ++HQ N++
Sbjct: 186 IQTLILQVEALQAQLGEQTKLSREQIEGLIEDRRIHLEEIQVQHQRNQNKIKELTKNLHH 245
Query: 99 AEETINENAADFQDFEAEETNEGRHFPDNLCPFWNKRDDVLCSSMKEGRLEFASMFDTI 157
+E + E+ DF +E N+ + W D L S +K+ R++ D I
Sbjct: 246 TQELLYESTKDFLQLRSENQNKEKS--------WMLEKDNLMSKIKQYRVQCKKKEDKI 296
>gi|14150165 coiled-coil domain containing 77 isoform a [Homo
sapiens]
Length = 488
Score = 28.5 bits (62), Expect = 3.6
Identities = 24/119 (20%), Positives = 48/119 (40%), Gaps = 8/119 (6%)
Query: 39 MRSLLLDSTQRLEKIYQSVILSKPKGKGLNLRSLNSLRSSLLEHQGNESSADFTVPKFLQ 98
+++L+L ++ + LS+ + +GL L ++HQ N++
Sbjct: 218 IQTLILQVEALQAQLGEQTKLSREQIEGLIEDRRIHLEEIQVQHQRNQNKIKELTKNLHH 277
Query: 99 AEETINENAADFQDFEAEETNEGRHFPDNLCPFWNKRDDVLCSSMKEGRLEFASMFDTI 157
+E + E+ DF +E N+ + W D L S +K+ R++ D I
Sbjct: 278 TQELLYESTKDFLQLRSENQNKEKS--------WMLEKDNLMSKIKQYRVQCKKKEDKI 328
>gi|194306535 coiled-coil domain containing 77 isoform b [Homo
sapiens]
Length = 456
Score = 28.5 bits (62), Expect = 3.6
Identities = 24/119 (20%), Positives = 48/119 (40%), Gaps = 8/119 (6%)
Query: 39 MRSLLLDSTQRLEKIYQSVILSKPKGKGLNLRSLNSLRSSLLEHQGNESSADFTVPKFLQ 98
+++L+L ++ + LS+ + +GL L ++HQ N++
Sbjct: 186 IQTLILQVEALQAQLGEQTKLSREQIEGLIEDRRIHLEEIQVQHQRNQNKIKELTKNLHH 245
Query: 99 AEETINENAADFQDFEAEETNEGRHFPDNLCPFWNKRDDVLCSSMKEGRLEFASMFDTI 157
+E + E+ DF +E N+ + W D L S +K+ R++ D I
Sbjct: 246 TQELLYESTKDFLQLRSENQNKEKS--------WMLEKDNLMSKIKQYRVQCKKKEDKI 296
>gi|21483182 zinc finger with KRAB and SCAN domains 5 [Homo sapiens]
Length = 839
Score = 28.5 bits (62), Expect = 3.6
Identities = 18/65 (27%), Positives = 27/65 (41%)
Query: 47 TQRLEKIYQSVILSKPKGKGLNLRSLNSLRSSLLEHQGNESSADFTVPKFLQAEETINEN 106
T EK YQ I + G+ + + + SS HQ +E FT+ L + I+
Sbjct: 738 THTAEKPYQCDICRENVGQCSHTKQHQKIYSSTKSHQCHECGRGFTLKSHLNQHQRIHTG 797
Query: 107 AADFQ 111
FQ
Sbjct: 798 EKPFQ 802
>gi|11036642 zinc finger with KRAB and SCAN domains 5 [Homo sapiens]
Length = 839
Score = 28.5 bits (62), Expect = 3.6
Identities = 18/65 (27%), Positives = 27/65 (41%)
Query: 47 TQRLEKIYQSVILSKPKGKGLNLRSLNSLRSSLLEHQGNESSADFTVPKFLQAEETINEN 106
T EK YQ I + G+ + + + SS HQ +E FT+ L + I+
Sbjct: 738 THTAEKPYQCDICRENVGQCSHTKQHQKIYSSTKSHQCHECGRGFTLKSHLNQHQRIHTG 797
Query: 107 AADFQ 111
FQ
Sbjct: 798 EKPFQ 802
>gi|225735557 nuclear factor erythroid 2-like 3 [Homo sapiens]
Length = 694
Score = 28.1 bits (61), Expect = 4.7
Identities = 28/104 (26%), Positives = 40/104 (38%), Gaps = 3/104 (2%)
Query: 81 EHQGNESSADFTVPKFLQAEETINENAADFQDFEAEETNEG---RHFPDNLCPFWNKRDD 137
+H+ NE LQ + A+ D+EAE+T E RH F +
Sbjct: 207 QHEENEERVSAQKENSLQQNDDDENKIAEKPDWEAEKTTESRNERHLNGTDTSFSLEDLF 266
Query: 138 VLCSSMKEGRLEFASMFDTIHAKDDTKAQDIMHGYFVSFNFFIS 181
L SS E LE S+ D + + Y V+F+ IS
Sbjct: 267 QLLSSQPENSLEGISLGDIPLPGSISDGMNSSAHYHVNFSQAIS 310
>gi|208431757 KLRAQ motif containing 1 isoform 3 [Homo sapiens]
Length = 734
Score = 28.1 bits (61), Expect = 4.7
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 11/95 (11%)
Query: 26 TLRFLDSLSPSVHMRSLLLDSTQRLEKIYQSVILSKPKGKGLNLRSLNSLRSSLLEHQGN 85
+LR L S+ R+L L +R+E + + LS+P+GK ++ S SS Q
Sbjct: 5 SLRKLQQEMDSLTFRNLQL--AKRVELLQDELALSEPRGK----KNKKSGESSSQLSQEQ 58
Query: 86 ESSADFTVPKFLQAEETINENAADFQDFEAEETNE 120
+S D + K ++ E ++ Q FEA+E ++
Sbjct: 59 KSVFDEDLQKKIEENERLH-----IQFFEADEQHK 88
>gi|24308420 KLRAQ motif containing 1 isoform 2 [Homo sapiens]
Length = 769
Score = 28.1 bits (61), Expect = 4.7
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 11/95 (11%)
Query: 26 TLRFLDSLSPSVHMRSLLLDSTQRLEKIYQSVILSKPKGKGLNLRSLNSLRSSLLEHQGN 85
+LR L S+ R+L L +R+E + + LS+P+GK ++ S SS Q
Sbjct: 51 SLRKLQQEMDSLTFRNLQL--AKRVELLQDELALSEPRGK----KNKKSGESSSQLSQEQ 104
Query: 86 ESSADFTVPKFLQAEETINENAADFQDFEAEETNE 120
+S D + K ++ E ++ Q FEA+E ++
Sbjct: 105 KSVFDEDLQKKIEENERLH-----IQFFEADEQHK 134
>gi|208431754 KLRAQ motif containing 1 isoform 1 [Homo sapiens]
Length = 780
Score = 28.1 bits (61), Expect = 4.7
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 11/95 (11%)
Query: 26 TLRFLDSLSPSVHMRSLLLDSTQRLEKIYQSVILSKPKGKGLNLRSLNSLRSSLLEHQGN 85
+LR L S+ R+L L +R+E + + LS+P+GK ++ S SS Q
Sbjct: 51 SLRKLQQEMDSLTFRNLQL--AKRVELLQDELALSEPRGK----KNKKSGESSSQLSQEQ 104
Query: 86 ESSADFTVPKFLQAEETINENAADFQDFEAEETNE 120
+S D + K ++ E ++ Q FEA+E ++
Sbjct: 105 KSVFDEDLQKKIEENERLH-----IQFFEADEQHK 134
>gi|122937388 MAX gene associated [Homo sapiens]
Length = 3114
Score = 27.7 bits (60), Expect = 6.1
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 8/48 (16%)
Query: 81 EHQGNESSADFTVPKFLQAEETINENAAD--------FQDFEAEETNE 120
E +G SSADFTV + +E NE D D+++EE ++
Sbjct: 2335 EKKGGRSSADFTVLDLEEDDEDDNEKTDDSIDEIVDVVSDYQSEEVDD 2382
>gi|116805342 human immunodeficiency virus type I enhancer binding
protein 1 [Homo sapiens]
Length = 2718
Score = 27.3 bits (59), Expect = 8.0
Identities = 13/51 (25%), Positives = 26/51 (50%)
Query: 75 LRSSLLEHQGNESSADFTVPKFLQAEETINENAADFQDFEAEETNEGRHFP 125
LR + +EH ESS D T+ + L E +++ ++ + E+ ++ P
Sbjct: 1284 LRLAEIEHSSTESSFDSTLSRSLSRESSLSHTSSFSASLDIEDVSKTEASP 1334
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.134 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,397,330
Number of Sequences: 37866
Number of extensions: 253508
Number of successful extensions: 596
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 587
Number of HSP's gapped (non-prelim): 20
length of query: 189
length of database: 18,247,518
effective HSP length: 96
effective length of query: 93
effective length of database: 14,612,382
effective search space: 1358951526
effective search space used: 1358951526
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.