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Search of human proteins with 239747072
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239747072 PREDICTED: hypothetical protein XP_002344273 [Homo
sapiens]
(134 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239747072 PREDICTED: hypothetical protein XP_002344273 [Homo ... 289 4e-79
gi|239747070 PREDICTED: hypothetical protein XP_002344272 [Homo ... 289 4e-79
gi|239747052 PREDICTED: hypothetical protein XP_002344263 [Homo ... 289 4e-79
gi|239747042 PREDICTED: hypothetical protein XP_002344258 [Homo ... 289 4e-79
gi|239747062 PREDICTED: hypothetical protein XP_002344268 [Homo ... 286 3e-78
gi|239747058 PREDICTED: hypothetical protein XP_002344266 [Homo ... 276 5e-75
gi|239747054 PREDICTED: hypothetical protein XP_002344264 [Homo ... 272 7e-74
gi|239747066 PREDICTED: hypothetical protein XP_002344270 [Homo ... 69 1e-12
gi|239747068 PREDICTED: hypothetical protein XP_002344271 [Homo ... 67 4e-12
gi|239747056 PREDICTED: hypothetical protein XP_002344265 [Homo ... 67 4e-12
gi|239747048 PREDICTED: hypothetical protein XP_002344261 [Homo ... 67 4e-12
gi|239747044 PREDICTED: hypothetical protein XP_002344259 [Homo ... 67 4e-12
gi|239747038 PREDICTED: hypothetical protein XP_002344256 [Homo ... 67 4e-12
gi|239747060 PREDICTED: hypothetical protein XP_002344267 [Homo ... 66 7e-12
gi|239747046 PREDICTED: hypothetical protein XP_002344260 [Homo ... 66 7e-12
gi|239747050 PREDICTED: hypothetical protein XP_002344262 [Homo ... 65 1e-11
gi|239747040 PREDICTED: hypothetical protein XP_002344257 [Homo ... 65 1e-11
gi|239747064 PREDICTED: hypothetical protein XP_002344269 [Homo ... 65 2e-11
gi|4557493 cleavage stimulation factor subunit 2 [Homo sapiens] 46 8e-06
gi|14149675 cleavage stimulation factor, 3' pre-RNA, subunit 2, ... 42 1e-04
gi|30061565 La ribonucleoprotein domain family member 2 isoform ... 36 0.008
gi|30061569 La ribonucleoprotein domain family member 2 isoform ... 36 0.008
gi|30061567 La ribonucleoprotein domain family member 2 isoform ... 36 0.008
gi|19923901 hypothetical protein LOC91523 [Homo sapiens] 31 0.26
gi|239749338 PREDICTED: hypothetical protein XP_002346998 [Homo ... 30 0.44
gi|239755286 PREDICTED: similar to hCG1742442 [Homo sapiens] 30 0.76
gi|14149793 glutamine rich 2 [Homo sapiens] 29 0.99
gi|56549694 enabled homolog isoform a [Homo sapiens] 28 1.7
gi|39930375 enabled homolog isoform b [Homo sapiens] 28 1.7
gi|215599992 cyclin D binding myb-like transcription factor 1 is... 28 1.7
>gi|239747072 PREDICTED: hypothetical protein XP_002344273 [Homo
sapiens]
Length = 134
Score = 289 bits (740), Expect = 4e-79
Identities = 134/134 (100%), Positives = 134/134 (100%)
Query: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA
Sbjct: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
Query: 61 VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNV 120
VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNV
Sbjct: 61 VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNV 120
Query: 121 IECNGMQKNGIQNH 134
IECNGMQKNGIQNH
Sbjct: 121 IECNGMQKNGIQNH 134
>gi|239747070 PREDICTED: hypothetical protein XP_002344272 [Homo
sapiens]
Length = 134
Score = 289 bits (740), Expect = 4e-79
Identities = 134/134 (100%), Positives = 134/134 (100%)
Query: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA
Sbjct: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
Query: 61 VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNV 120
VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNV
Sbjct: 61 VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNV 120
Query: 121 IECNGMQKNGIQNH 134
IECNGMQKNGIQNH
Sbjct: 121 IECNGMQKNGIQNH 134
>gi|239747052 PREDICTED: hypothetical protein XP_002344263 [Homo
sapiens]
Length = 134
Score = 289 bits (740), Expect = 4e-79
Identities = 134/134 (100%), Positives = 134/134 (100%)
Query: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA
Sbjct: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
Query: 61 VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNV 120
VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNV
Sbjct: 61 VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNV 120
Query: 121 IECNGMQKNGIQNH 134
IECNGMQKNGIQNH
Sbjct: 121 IECNGMQKNGIQNH 134
>gi|239747042 PREDICTED: hypothetical protein XP_002344258 [Homo
sapiens]
Length = 134
Score = 289 bits (740), Expect = 4e-79
Identities = 134/134 (100%), Positives = 134/134 (100%)
Query: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA
Sbjct: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
Query: 61 VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNV 120
VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNV
Sbjct: 61 VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNV 120
Query: 121 IECNGMQKNGIQNH 134
IECNGMQKNGIQNH
Sbjct: 121 IECNGMQKNGIQNH 134
>gi|239747062 PREDICTED: hypothetical protein XP_002344268 [Homo
sapiens]
Length = 134
Score = 286 bits (732), Expect = 3e-78
Identities = 133/134 (99%), Positives = 133/134 (99%)
Query: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA
Sbjct: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
Query: 61 VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNV 120
VEENRMECKRKERNGLEWNGIHWNGRECSVMDR GIKWNATVSNGIKMYGMECNETESNV
Sbjct: 61 VEENRMECKRKERNGLEWNGIHWNGRECSVMDRSGIKWNATVSNGIKMYGMECNETESNV 120
Query: 121 IECNGMQKNGIQNH 134
IECNGMQKNGIQNH
Sbjct: 121 IECNGMQKNGIQNH 134
>gi|239747058 PREDICTED: hypothetical protein XP_002344266 [Homo
sapiens]
Length = 167
Score = 276 bits (705), Expect = 5e-75
Identities = 128/128 (100%), Positives = 128/128 (100%)
Query: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA
Sbjct: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
Query: 61 VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNV 120
VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNV
Sbjct: 61 VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNV 120
Query: 121 IECNGMQK 128
IECNGMQK
Sbjct: 121 IECNGMQK 128
Score = 44.7 bits (104), Expect = 2e-05
Identities = 29/73 (39%), Positives = 38/73 (52%), Gaps = 18/73 (24%)
Query: 3 SNGMVWNGMNTNVMQPNRMESNGMEYKEME--------SKRMETNGMELNGMELNGMGTN 54
SNG+ GM N + N +E NGM+ E + SKR ++NGME NGME+N
Sbjct: 103 SNGIKMYGMECNETESNVIECNGMQKMESKIIDWKGWVSKRNDSNGMESNGMEVN----- 157
Query: 55 GVKLYAVEENRME 67
+E NRME
Sbjct: 158 -----RIELNRME 165
Score = 34.7 bits (78), Expect = 0.024
Identities = 18/39 (46%), Positives = 21/39 (53%)
Query: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETN 39
MES + W G + N MESNGME +E RME N
Sbjct: 129 MESKIIDWKGWVSKRNDSNGMESNGMEVNRIELNRMEWN 167
>gi|239747054 PREDICTED: hypothetical protein XP_002344264 [Homo
sapiens]
Length = 155
Score = 272 bits (695), Expect = 7e-74
Identities = 126/128 (98%), Positives = 127/128 (99%)
Query: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA
Sbjct: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
Query: 61 VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNV 120
VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNV
Sbjct: 61 VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNV 120
Query: 121 IECNGMQK 128
IECNG +K
Sbjct: 121 IECNGCKK 128
>gi|239747066 PREDICTED: hypothetical protein XP_002344270 [Homo
sapiens]
Length = 97
Score = 68.6 bits (166), Expect = 1e-12
Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 4 NGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEE 63
N + WNG N + + N M +K +E E N +E NG+E NGM +G+K ++
Sbjct: 7 NQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIKCNGIKW 66
Query: 64 NRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWN 99
N +EC +G+ WNG+ G EC +M+R ++WN
Sbjct: 67 NGIEC-----SGMLWNGMECIGMECPLMERIRVEWN 97
Score = 65.5 bits (158), Expect = 1e-11
Identities = 38/102 (37%), Positives = 55/102 (53%), Gaps = 12/102 (11%)
Query: 21 MESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENRMECKRKERNGLEWNG 80
MESN + +++ NG ELNG++ G N + +E + E ERNGLEWNG
Sbjct: 1 MESN-------QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNG 53
Query: 81 IHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIE 122
+ W+G +C+ GIKWN +G+ GMEC E ++E
Sbjct: 54 MSWDGIKCN-----GIKWNGIECSGMLWNGMECIGMECPLME 90
Score = 51.2 bits (121), Expect = 2e-07
Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Query: 36 METNGMELNGMELNGMGTNGVKLYAVEENRMECKRKERNGLEWNGIHWNGRECSVMDRPG 95
ME+N + N ++ NG NGV + N M K E + EWN + NG E + G
Sbjct: 1 MESN--QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWN-----G 53
Query: 96 IKWNATVSNGIKMYGMECNETESNVIECNGMQ 127
+ W+ NGIK G+EC+ N +EC GM+
Sbjct: 54 MSWDGIKCNGIKWNGIECSGMLWNGMECIGME 85
Score = 51.2 bits (121), Expect = 2e-07
Identities = 23/56 (41%), Positives = 33/56 (58%)
Query: 77 EWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGMQKNGIQ 132
+WN I WNG+E + +D G WN G++ + E NE E N +E NGM +GI+
Sbjct: 5 QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
Score = 48.1 bits (113), Expect = 2e-06
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 15/79 (18%)
Query: 64 NRMECKRKERNGLE-----WNGIHWNG-----RECSVMDRPGIKWNATVSNGIKMYGMEC 113
N+++ KE NG++ WN ++W G E + ++R G++W NG+ G++C
Sbjct: 7 NQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEW-----NGMSWDGIKC 61
Query: 114 NETESNVIECNGMQKNGIQ 132
N + N IEC+GM NG++
Sbjct: 62 NGIKWNGIECSGMLWNGME 80
Score = 38.9 bits (89), Expect = 0.001
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 25/79 (31%)
Query: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
+E NG+ WNGM+ + ++ N ++ NG +E +GM NGME G
Sbjct: 44 LERNGLEWNGMSWDGIKCNGIKWNG----------IECSGMLWNGMECIG---------- 83
Query: 61 VEENRMECKRKERNGLEWN 79
MEC ER +EWN
Sbjct: 84 -----MECPLMERIRVEWN 97
>gi|239747068 PREDICTED: hypothetical protein XP_002344271 [Homo
sapiens]
Length = 97
Score = 67.0 bits (162), Expect = 4e-12
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 4 NGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEE 63
N + WNG N + + N M +K +E E N +E NG+E NGM +G+K ++
Sbjct: 7 NQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIKWNGIKW 66
Query: 64 NRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWN 99
N +EC NG+ WNG+ G EC +M+ ++WN
Sbjct: 67 NGIEC-----NGMLWNGMECIGMECPLMEWIRVEWN 97
Score = 63.9 bits (154), Expect = 4e-11
Identities = 41/107 (38%), Positives = 55/107 (51%), Gaps = 22/107 (20%)
Query: 21 MESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENRMECKRKERNGLEWNG 80
MESN + +++ NG ELNG++ G N + +E + E ERNGLEWNG
Sbjct: 1 MESN-------QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNG 53
Query: 81 IHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGMQ 127
+ W+ GIKW NGIK G+ECN N +EC GM+
Sbjct: 54 MSWD----------GIKW-----NGIKWNGIECNGMLWNGMECIGME 85
Score = 51.2 bits (121), Expect = 2e-07
Identities = 23/56 (41%), Positives = 33/56 (58%)
Query: 77 EWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGMQKNGIQ 132
+WN I WNG+E + +D G WN G++ + E NE E N +E NGM +GI+
Sbjct: 5 QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
Score = 38.1 bits (87), Expect = 0.002
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 30/84 (35%)
Query: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
+E NG+ WNGM+ +G+++ NG++ NG+E NGM NG
Sbjct: 44 LERNGLEWNGMSW----------DGIKW----------NGIKWNGIECNGMLWNG----- 78
Query: 61 VEENRMECKRKERNGLEWNGIHWN 84
MEC E +EW + WN
Sbjct: 79 -----MECIGMECPLMEWIRVEWN 97
>gi|239747056 PREDICTED: hypothetical protein XP_002344265 [Homo
sapiens]
Length = 97
Score = 67.0 bits (162), Expect = 4e-12
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 4 NGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEE 63
N + WNG N + + N M +K +E E N +E NG+E NGM +G+K ++
Sbjct: 7 NQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIKWNGIKW 66
Query: 64 NRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWN 99
N +EC NG+ WNG+ G EC +M+ ++WN
Sbjct: 67 NGIEC-----NGMLWNGMECIGMECPLMEWIRVEWN 97
Score = 63.9 bits (154), Expect = 4e-11
Identities = 41/107 (38%), Positives = 55/107 (51%), Gaps = 22/107 (20%)
Query: 21 MESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENRMECKRKERNGLEWNG 80
MESN + +++ NG ELNG++ G N + +E + E ERNGLEWNG
Sbjct: 1 MESN-------QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNG 53
Query: 81 IHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGMQ 127
+ W+ GIKW NGIK G+ECN N +EC GM+
Sbjct: 54 MSWD----------GIKW-----NGIKWNGIECNGMLWNGMECIGME 85
Score = 51.2 bits (121), Expect = 2e-07
Identities = 23/56 (41%), Positives = 33/56 (58%)
Query: 77 EWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGMQKNGIQ 132
+WN I WNG+E + +D G WN G++ + E NE E N +E NGM +GI+
Sbjct: 5 QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
Score = 38.1 bits (87), Expect = 0.002
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 30/84 (35%)
Query: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
+E NG+ WNGM+ +G+++ NG++ NG+E NGM NG
Sbjct: 44 LERNGLEWNGMSW----------DGIKW----------NGIKWNGIECNGMLWNG----- 78
Query: 61 VEENRMECKRKERNGLEWNGIHWN 84
MEC E +EW + WN
Sbjct: 79 -----MECIGMECPLMEWIRVEWN 97
>gi|239747048 PREDICTED: hypothetical protein XP_002344261 [Homo
sapiens]
Length = 97
Score = 67.0 bits (162), Expect = 4e-12
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 4 NGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEE 63
N + WNG N + + N M +K +E E N +E NG+E NGM +G+K ++
Sbjct: 7 NQIKWNGKELNGVDGIGWDWNEMYWKGLEFDETEWNELERNGLEWNGMSWDGIKWNGIKW 66
Query: 64 NRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWN 99
N +EC NG+ WNG+ G EC +M+ ++WN
Sbjct: 67 NGIEC-----NGMLWNGMECIGMECPLMEWIRVEWN 97
Score = 63.9 bits (154), Expect = 4e-11
Identities = 41/107 (38%), Positives = 55/107 (51%), Gaps = 22/107 (20%)
Query: 21 MESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENRMECKRKERNGLEWNG 80
MESN + +++ NG ELNG++ G N + +E + E ERNGLEWNG
Sbjct: 1 MESN-------QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFDETEWNELERNGLEWNG 53
Query: 81 IHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGMQ 127
+ W+ GIKW NGIK G+ECN N +EC GM+
Sbjct: 54 MSWD----------GIKW-----NGIKWNGIECNGMLWNGMECIGME 85
Score = 49.3 bits (116), Expect = 9e-07
Identities = 23/56 (41%), Positives = 32/56 (57%)
Query: 77 EWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGMQKNGIQ 132
+WN I WNG+E + +D G WN G++ E NE E N +E NGM +GI+
Sbjct: 5 QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFDETEWNELERNGLEWNGMSWDGIK 60
Score = 38.1 bits (87), Expect = 0.002
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 30/84 (35%)
Query: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
+E NG+ WNGM+ +G+++ NG++ NG+E NGM NG
Sbjct: 44 LERNGLEWNGMSW----------DGIKW----------NGIKWNGIECNGMLWNG----- 78
Query: 61 VEENRMECKRKERNGLEWNGIHWN 84
MEC E +EW + WN
Sbjct: 79 -----MECIGMECPLMEWIRVEWN 97
>gi|239747044 PREDICTED: hypothetical protein XP_002344259 [Homo
sapiens]
Length = 97
Score = 67.0 bits (162), Expect = 4e-12
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 4 NGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEE 63
N + WNG N + + N M +K +E E N +E NG+E NGM +G+K ++
Sbjct: 7 NQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIKWNGIKW 66
Query: 64 NRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWN 99
N +EC NG+ WNG+ G EC +M+ ++WN
Sbjct: 67 NGIEC-----NGMLWNGMECIGMECPLMEWIRVEWN 97
Score = 63.9 bits (154), Expect = 4e-11
Identities = 41/107 (38%), Positives = 55/107 (51%), Gaps = 22/107 (20%)
Query: 21 MESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENRMECKRKERNGLEWNG 80
MESN + +++ NG ELNG++ G N + +E + E ERNGLEWNG
Sbjct: 1 MESN-------QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNG 53
Query: 81 IHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGMQ 127
+ W+ GIKW NGIK G+ECN N +EC GM+
Sbjct: 54 MSWD----------GIKW-----NGIKWNGIECNGMLWNGMECIGME 85
Score = 51.2 bits (121), Expect = 2e-07
Identities = 23/56 (41%), Positives = 33/56 (58%)
Query: 77 EWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGMQKNGIQ 132
+WN I WNG+E + +D G WN G++ + E NE E N +E NGM +GI+
Sbjct: 5 QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
Score = 38.1 bits (87), Expect = 0.002
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 30/84 (35%)
Query: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
+E NG+ WNGM+ +G+++ NG++ NG+E NGM NG
Sbjct: 44 LERNGLEWNGMSW----------DGIKW----------NGIKWNGIECNGMLWNG----- 78
Query: 61 VEENRMECKRKERNGLEWNGIHWN 84
MEC E +EW + WN
Sbjct: 79 -----MECIGMECPLMEWIRVEWN 97
>gi|239747038 PREDICTED: hypothetical protein XP_002344256 [Homo
sapiens]
Length = 97
Score = 67.0 bits (162), Expect = 4e-12
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 4 NGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEE 63
N + WNG N + + N M +K +E E N +E NG+E NGM +G+K ++
Sbjct: 7 NQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIKWNGIKW 66
Query: 64 NRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWN 99
N +EC NG+ WNG+ G EC +M+ ++WN
Sbjct: 67 NGIEC-----NGMLWNGMECIGMECPLMEWIRVEWN 97
Score = 63.9 bits (154), Expect = 4e-11
Identities = 41/107 (38%), Positives = 55/107 (51%), Gaps = 22/107 (20%)
Query: 21 MESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENRMECKRKERNGLEWNG 80
MESN + +++ NG ELNG++ G N + +E + E ERNGLEWNG
Sbjct: 1 MESN-------QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNG 53
Query: 81 IHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGMQ 127
+ W+ GIKW NGIK G+ECN N +EC GM+
Sbjct: 54 MSWD----------GIKW-----NGIKWNGIECNGMLWNGMECIGME 85
Score = 51.2 bits (121), Expect = 2e-07
Identities = 23/56 (41%), Positives = 33/56 (58%)
Query: 77 EWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGMQKNGIQ 132
+WN I WNG+E + +D G WN G++ + E NE E N +E NGM +GI+
Sbjct: 5 QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
Score = 38.1 bits (87), Expect = 0.002
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 30/84 (35%)
Query: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
+E NG+ WNGM+ +G+++ NG++ NG+E NGM NG
Sbjct: 44 LERNGLEWNGMSW----------DGIKW----------NGIKWNGIECNGMLWNG----- 78
Query: 61 VEENRMECKRKERNGLEWNGIHWN 84
MEC E +EW + WN
Sbjct: 79 -----MECIGMECPLMEWIRVEWN 97
>gi|239747060 PREDICTED: hypothetical protein XP_002344267 [Homo
sapiens]
Length = 97
Score = 66.2 bits (160), Expect = 7e-12
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 4 NGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEE 63
N + WNG N + + N M +K +E E N +E NG+E NGM +G+K ++
Sbjct: 7 NQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIKWNDIKW 66
Query: 64 NRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWN 99
N +EC NG+ WNG+ G EC +M+ ++WN
Sbjct: 67 NGIEC-----NGMLWNGMECIGMECPLMEWIRVEWN 97
Score = 61.2 bits (147), Expect = 2e-10
Identities = 37/104 (35%), Positives = 56/104 (53%), Gaps = 7/104 (6%)
Query: 21 MESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENRMECKRKERNGLEWNG 80
MESN + +++ NG ELNG++ G N + +E + E ERNGLEWNG
Sbjct: 1 MESN-------QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNG 53
Query: 81 IHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECN 124
+ W+G + + + GI+ N + NG++ GMEC E +E N
Sbjct: 54 MSWDGIKWNDIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97
Score = 51.2 bits (121), Expect = 2e-07
Identities = 23/56 (41%), Positives = 33/56 (58%)
Query: 77 EWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGMQKNGIQ 132
+WN I WNG+E + +D G WN G++ + E NE E N +E NGM +GI+
Sbjct: 5 QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
Score = 37.7 bits (86), Expect = 0.003
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 15/79 (18%)
Query: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
+E + WN + N ++ N M +G+++ +++ +E NGM NGME G
Sbjct: 34 LEFHETEWNELERNGLEWNGMSWDGIKWNDIKWNGIECNGMLWNGMECIG---------- 83
Query: 61 VEENRMECKRKERNGLEWN 79
MEC E +EWN
Sbjct: 84 -----MECPLMEWIRVEWN 97
>gi|239747046 PREDICTED: hypothetical protein XP_002344260 [Homo
sapiens]
Length = 97
Score = 66.2 bits (160), Expect = 7e-12
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 4 NGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEE 63
N + WNG N + + N M +K +E E N +E NG+E NGM +G+K ++
Sbjct: 7 NQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIKWNDIKW 66
Query: 64 NRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWN 99
N +EC NG+ WNG+ G EC +M+ ++WN
Sbjct: 67 NGIEC-----NGMLWNGMECIGMECPLMEWIRVEWN 97
Score = 61.2 bits (147), Expect = 2e-10
Identities = 37/104 (35%), Positives = 56/104 (53%), Gaps = 7/104 (6%)
Query: 21 MESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENRMECKRKERNGLEWNG 80
MESN + +++ NG ELNG++ G N + +E + E ERNGLEWNG
Sbjct: 1 MESN-------QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNG 53
Query: 81 IHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECN 124
+ W+G + + + GI+ N + NG++ GMEC E +E N
Sbjct: 54 MSWDGIKWNDIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97
Score = 51.2 bits (121), Expect = 2e-07
Identities = 23/56 (41%), Positives = 33/56 (58%)
Query: 77 EWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGMQKNGIQ 132
+WN I WNG+E + +D G WN G++ + E NE E N +E NGM +GI+
Sbjct: 5 QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
Score = 37.7 bits (86), Expect = 0.003
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 15/79 (18%)
Query: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
+E + WN + N ++ N M +G+++ +++ +E NGM NGME G
Sbjct: 34 LEFHETEWNELERNGLEWNGMSWDGIKWNDIKWNGIECNGMLWNGMECIG---------- 83
Query: 61 VEENRMECKRKERNGLEWN 79
MEC E +EWN
Sbjct: 84 -----MECPLMEWIRVEWN 97
>gi|239747050 PREDICTED: hypothetical protein XP_002344262 [Homo
sapiens]
Length = 97
Score = 65.5 bits (158), Expect = 1e-11
Identities = 38/104 (36%), Positives = 57/104 (54%), Gaps = 7/104 (6%)
Query: 21 MESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENRMECKRKERNGLEWNG 80
MESN + +++ NG ELNG++ G N + +E + E ERNGLEWNG
Sbjct: 1 MESN-------QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNG 53
Query: 81 IHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECN 124
+ W+G + + + GI+ N + NG++ GMEC E +ECN
Sbjct: 54 MSWDGIKWNDIKWNGIECNGMLWNGMECIGMECPLMEWIRVECN 97
Score = 61.2 bits (147), Expect = 2e-10
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 4 NGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEE 63
N + WNG N + + N M +K +E E N +E NG+E NGM +G+K ++
Sbjct: 7 NQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIKWNDIKW 66
Query: 64 NRMECKRKERNGLEWNGIHWNGRECSVMD 92
N +EC NG+ WNG+ G EC +M+
Sbjct: 67 NGIEC-----NGMLWNGMECIGMECPLME 90
Score = 51.2 bits (121), Expect = 2e-07
Identities = 23/56 (41%), Positives = 33/56 (58%)
Query: 77 EWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGMQKNGIQ 132
+WN I WNG+E + +D G WN G++ + E NE E N +E NGM +GI+
Sbjct: 5 QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
Score = 47.4 bits (111), Expect = 4e-06
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 15/79 (18%)
Query: 64 NRMECKRKERNGLE-----WNGIHWNG-----RECSVMDRPGIKWNATVSNGIKMYGMEC 113
N+++ KE NG++ WN ++W G E + ++R G++W NG+ G++
Sbjct: 7 NQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEW-----NGMSWDGIKW 61
Query: 114 NETESNVIECNGMQKNGIQ 132
N+ + N IECNGM NG++
Sbjct: 62 NDIKWNGIECNGMLWNGME 80
Score = 47.4 bits (111), Expect = 4e-06
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 20/97 (20%)
Query: 2 ESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAV 61
E NG+ G + N M +E + E+ E+E +E NGM +G++ N +
Sbjct: 15 ELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIKWNDI---------- 64
Query: 62 EENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKW 98
+ NG+E NG+ WNG EC M+ P ++W
Sbjct: 65 ----------KWNGIECNGMLWNGMECIGMECPLMEW 91
Score = 47.0 bits (110), Expect = 5e-06
Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 4 NGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEE 63
N M W G+ + + N +E NG+E+ M ++ N ++ NG+E NGM NG++ +E
Sbjct: 27 NEMYWKGLEFHETEWNELERNGLEWNGMSWDGIKWNDIKWNGIECNGMLWNGMECIGMEC 86
Query: 64 NRMECKRKERN 74
ME R E N
Sbjct: 87 PLMEWIRVECN 97
Score = 36.2 bits (82), Expect = 0.008
Identities = 17/51 (33%), Positives = 30/51 (58%)
Query: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGM 51
+E + WN + N ++ N M +G+++ +++ +E NGM NGME GM
Sbjct: 34 LEFHETEWNELERNGLEWNGMSWDGIKWNDIKWNGIECNGMLWNGMECIGM 84
Score = 35.8 bits (81), Expect = 0.011
Identities = 20/49 (40%), Positives = 28/49 (57%)
Query: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELN 49
+E NGM W+G+ N ++ N +E NGM + ME ME ME +E N
Sbjct: 49 LEWNGMSWDGIKWNDIKWNGIECNGMLWNGMECIGMECPLMEWIRVECN 97
>gi|239747040 PREDICTED: hypothetical protein XP_002344257 [Homo
sapiens]
Length = 97
Score = 65.5 bits (158), Expect = 1e-11
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 4 NGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEE 63
N + WNG N + + N M +K +E E N +E NG+E NGM +G+K ++
Sbjct: 7 NQIKWNGKELNGVDWIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIKWNDIKW 66
Query: 64 NRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWN 99
N +EC NG+ WNG+ G EC +M+ ++WN
Sbjct: 67 NGIEC-----NGMLWNGMECIGMECPLMEWIRVEWN 97
Score = 62.0 bits (149), Expect = 1e-10
Identities = 37/104 (35%), Positives = 56/104 (53%), Gaps = 7/104 (6%)
Query: 21 MESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENRMECKRKERNGLEWNG 80
MESN + +++ NG ELNG++ G N + +E + E ERNGLEWNG
Sbjct: 1 MESN-------QWNQIKWNGKELNGVDWIGWDWNEMYWKGLEFHETEWNELERNGLEWNG 53
Query: 81 IHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECN 124
+ W+G + + + GI+ N + NG++ GMEC E +E N
Sbjct: 54 MSWDGIKWNDIKWNGIECNGMLWNGMECIGMECPLMEWIRVEWN 97
Score = 50.8 bits (120), Expect = 3e-07
Identities = 23/56 (41%), Positives = 33/56 (58%)
Query: 77 EWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGMQKNGIQ 132
+WN I WNG+E + +D G WN G++ + E NE E N +E NGM +GI+
Sbjct: 5 QWNQIKWNGKELNGVDWIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
Score = 48.1 bits (113), Expect = 2e-06
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 64 NRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGM-----ECNETES 118
N+++ KE NG++W G WN ++ +WN NG++ GM + N+ +
Sbjct: 7 NQIKWNGKELNGVDWIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIKWNDIKW 66
Query: 119 NVIECNGMQKNGIQ 132
N IECNGM NG++
Sbjct: 67 NGIECNGMLWNGME 80
Score = 37.7 bits (86), Expect = 0.003
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 15/79 (18%)
Query: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
+E + WN + N ++ N M +G+++ +++ +E NGM NGME G
Sbjct: 34 LEFHETEWNELERNGLEWNGMSWDGIKWNDIKWNGIECNGMLWNGMECIG---------- 83
Query: 61 VEENRMECKRKERNGLEWN 79
MEC E +EWN
Sbjct: 84 -----MECPLMEWIRVEWN 97
>gi|239747064 PREDICTED: hypothetical protein XP_002344269 [Homo
sapiens]
Length = 97
Score = 65.1 bits (157), Expect = 2e-11
Identities = 39/102 (38%), Positives = 55/102 (53%), Gaps = 12/102 (11%)
Query: 21 MESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENRMECKRKERNGLEWNG 80
MESN + +++ NG ELNG++ G N + +E + E ERNGLEWNG
Sbjct: 1 MESN-------QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNG 53
Query: 81 IHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIE 122
+ W+G + + GIKWN NG+ GMEC ES ++E
Sbjct: 54 MSWDGIKWN-----GIKWNGIECNGMLWNGMECIGMESPLME 90
Score = 63.2 bits (152), Expect = 6e-11
Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 4 NGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEE 63
N + WNG N + + N M +K +E E N +E NG+E NGM +G+K ++
Sbjct: 7 NQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIKWNGIKW 66
Query: 64 NRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWN 99
N +EC NG+ WNG+ G E +M+ ++WN
Sbjct: 67 NGIEC-----NGMLWNGMECIGMESPLMEWIRVEWN 97
Score = 52.8 bits (125), Expect = 8e-08
Identities = 28/83 (33%), Positives = 44/83 (53%)
Query: 2 ESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAV 61
E NG+ G + N M +E + E+ E+E +E NGM +G++ NG+ NG++ +
Sbjct: 15 ELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIKWNGIKWNGIECNGM 74
Query: 62 EENRMECKRKERNGLEWNGIHWN 84
N MEC E +EW + WN
Sbjct: 75 LWNGMECIGMESPLMEWIRVEWN 97
Score = 51.2 bits (121), Expect = 2e-07
Identities = 23/56 (41%), Positives = 33/56 (58%)
Query: 77 EWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGMQKNGIQ 132
+WN I WNG+E + +D G WN G++ + E NE E N +E NGM +GI+
Sbjct: 5 QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK 60
Score = 37.0 bits (84), Expect = 0.005
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 10/64 (15%)
Query: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
+E NG+ WNGM+ + ++ N ++ NG+E NGM NGME GM + ++
Sbjct: 44 LERNGLEWNGMSWDGIKWNGIKWNGIE----------CNGMLWNGMECIGMESPLMEWIR 93
Query: 61 VEEN 64
VE N
Sbjct: 94 VEWN 97
>gi|4557493 cleavage stimulation factor subunit 2 [Homo sapiens]
Length = 577
Score = 46.2 bits (108), Expect = 8e-06
Identities = 21/55 (38%), Positives = 31/55 (56%)
Query: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNG 55
ME+ M G++ ++ ME+ ME + ME++ ME ME+ GME GM T G
Sbjct: 415 MEARAMEARGLDARGLEARAMEARAMEARAMEARAMEARAMEVRGMEARGMDTRG 469
Score = 41.6 bits (96), Expect = 2e-04
Identities = 18/63 (28%), Positives = 33/63 (52%)
Query: 18 PNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENRMECKRKERNGLE 77
P +++ GME + ME++ ++ G+E ME M ++ A+E ME + E G++
Sbjct: 407 PRGIDARGMEARAMEARGLDARGLEARAMEARAMEARAMEARAMEARAMEVRGMEARGMD 466
Query: 78 WNG 80
G
Sbjct: 467 TRG 469
Score = 40.4 bits (93), Expect = 4e-04
Identities = 18/64 (28%), Positives = 33/64 (51%)
Query: 22 ESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENRMECKRKERNGLEWNGI 81
+ G++ + ME++ ME G++ G+E M ++ A+E ME + E G+E G+
Sbjct: 406 DPRGIDARGMEARAMEARGLDARGLEARAMEARAMEARAMEARAMEARAMEVRGMEARGM 465
Query: 82 HWNG 85
G
Sbjct: 466 DTRG 469
Score = 37.7 bits (86), Expect = 0.003
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGV 56
+++ GM M + +E+ ME + ME++ ME ME ME+ GM G+
Sbjct: 410 IDARGMEARAMEARGLDARGLEARAMEARAMEARAMEARAMEARAMEVRGMEARGM 465
Score = 37.4 bits (85), Expect = 0.004
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 2 ESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVK 57
+ G+ GM M+ +++ G+E + ME++ ME ME ME M G++
Sbjct: 406 DPRGIDARGMEARAMEARGLDARGLEARAMEARAMEARAMEARAMEARAMEVRGME 461
Score = 28.1 bits (61), Expect = 2.2
Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Query: 41 MELNGMELNGMGTNGVKLYAVEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWNA 100
++ G L+G G + ++ ME + E GL+ G+ E M+ ++ A
Sbjct: 392 LDQRGPPLDGRGGRDPR--GIDARGMEARAMEARGLDARGLEARAMEARAMEARAMEARA 449
Query: 101 TVSNGIKMYGMECN--ETESNVIECNGMQKNGIQ 132
+ +++ GME +T V G +G+Q
Sbjct: 450 MEARAMEVRGMEARGMDTRGPVPGPRGPIPSGMQ 483
>gi|14149675 cleavage stimulation factor, 3' pre-RNA, subunit 2,
64kDa, tau variant [Homo sapiens]
Length = 616
Score = 42.4 bits (98), Expect = 1e-04
Identities = 36/136 (26%), Positives = 55/136 (40%), Gaps = 5/136 (3%)
Query: 2 ESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNG-----MGTNGV 56
+S M M T V++ ME GME ME++ ME GM+ G+E+ G G
Sbjct: 414 DSRAMETRAMETEVLETRVMERRGMETCAMETRGMEARGMDARGLEMRGPVPSSRGPMTG 473
Query: 57 KLYAVEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNET 116
+ + + + GI G + M GI+ GI+ GM+
Sbjct: 474 GIQGPGPINIGAGGPPQGPRQVPGISGVGNPGAGMQGTGIQGTGMQGAGIQGGGMQGAGI 533
Query: 117 ESNVIECNGMQKNGIQ 132
+ I+ G+Q GIQ
Sbjct: 534 QGVSIQGGGIQGGGIQ 549
Score = 42.0 bits (97), Expect = 1e-04
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 6/126 (4%)
Query: 10 GMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENRMECK 69
G ++ M+ ME+ +E + ME + MET ME GME GM G+++ + +
Sbjct: 412 GRDSRAMETRAMETEVLETRVMERRGMETCAMETRGMEARGMDARGLEMRGPVPS---SR 468
Query: 70 RKERNGLEWNG---IHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGM 126
G++ G I G PGI G++ G++ + I+ GM
Sbjct: 469 GPMTGGIQGPGPINIGAGGPPQGPRQVPGISGVGNPGAGMQGTGIQGTGMQGAGIQGGGM 528
Query: 127 QKNGIQ 132
Q GIQ
Sbjct: 529 QGAGIQ 534
>gi|30061565 La ribonucleoprotein domain family member 2 isoform 2
[Homo sapiens]
Length = 522
Score = 36.2 bits (82), Expect = 0.008
Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 4/90 (4%)
Query: 6 MVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENR 65
+V G + + Q N+ N E +E KR ++ E +LNG G N + +E +
Sbjct: 10 LVNTGFQSVLSQGNKKPQNRKEKEEKVEKRSNSDSKENRETKLNGPGEN----VSEDEAQ 65
Query: 66 MECKRKERNGLEWNGIHWNGRECSVMDRPG 95
+RK N +W +H + +RPG
Sbjct: 66 SSNQRKRANKHKWVPLHLDVVRSESQERPG 95
>gi|30061569 La ribonucleoprotein domain family member 2 isoform 3
[Homo sapiens]
Length = 358
Score = 36.2 bits (82), Expect = 0.008
Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 4/90 (4%)
Query: 6 MVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENR 65
+V G + + Q N+ N E +E KR ++ E +LNG G N + +E +
Sbjct: 10 LVNTGFQSVLSQGNKKPQNRKEKEEKVEKRSNSDSKENRETKLNGPGEN----VSEDEAQ 65
Query: 66 MECKRKERNGLEWNGIHWNGRECSVMDRPG 95
+RK N +W +H + +RPG
Sbjct: 66 SSNQRKRANKHKWVPLHLDVVRSESQERPG 95
>gi|30061567 La ribonucleoprotein domain family member 2 isoform 1
[Homo sapiens]
Length = 914
Score = 36.2 bits (82), Expect = 0.008
Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 4/90 (4%)
Query: 6 MVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENR 65
+V G + + Q N+ N E +E KR ++ E +LNG G N + +E +
Sbjct: 10 LVNTGFQSVLSQGNKKPQNRKEKEEKVEKRSNSDSKENRETKLNGPGEN----VSEDEAQ 65
Query: 66 MECKRKERNGLEWNGIHWNGRECSVMDRPG 95
+RK N +W +H + +RPG
Sbjct: 66 SSNQRKRANKHKWVPLHLDVVRSESQERPG 95
>gi|19923901 hypothetical protein LOC91523 [Homo sapiens]
Length = 432
Score = 31.2 bits (69), Expect = 0.26
Identities = 10/17 (58%), Positives = 12/17 (70%)
Query: 70 RKERNGLEWNGIHWNGR 86
R R L W+G+HWNGR
Sbjct: 219 RHARENLHWDGVHWNGR 235
>gi|239749338 PREDICTED: hypothetical protein XP_002346998 [Homo
sapiens]
Length = 230
Score = 30.4 bits (67), Expect = 0.44
Identities = 24/96 (25%), Positives = 39/96 (40%)
Query: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
+E+NG + + N +E+NG +E+ T +E NG + NG +
Sbjct: 112 LENNGRLTPDLENNGRLTPHLENNGRLTPHLENNGRLTPHLENNGRLAPQLENNGRLVPH 171
Query: 61 VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGI 96
+E N E NG + NGR ++ GI
Sbjct: 172 LENNGRLTPHLENNGPLAPHLENNGRLAPQLENNGI 207
Score = 28.9 bits (63), Expect = 1.3
Identities = 32/136 (23%), Positives = 52/136 (38%), Gaps = 5/136 (3%)
Query: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
+E+NG + + +E+NG +E+ T +E NG + NG
Sbjct: 72 LENNGRLTPHLENKGRLTPDLENNGCLTPHLENNGRLTPDLENNGRLTPDLENNGRLTPH 131
Query: 61 VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNV 120
+E N E NG + NGR ++ G +NG +E N +
Sbjct: 132 LENNGRLTPHLENNGRLTPHLENNGRLAPQLENNGRLVPHLENNGRLTPHLENNGPLAPH 191
Query: 121 IECNG-----MQKNGI 131
+E NG ++ NGI
Sbjct: 192 LENNGRLAPQLENNGI 207
Score = 27.7 bits (60), Expect = 2.9
Identities = 31/134 (23%), Positives = 51/134 (38%)
Query: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
+E+NG + + +E+NG +E+K T +E NG + NG
Sbjct: 52 VENNGRLAPHLENKGRLTPHLENNGRLTPHLENKGRLTPDLENNGCLTPHLENNGRLTPD 111
Query: 61 VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNV 120
+E N E NG + NGR ++ G +NG +E N
Sbjct: 112 LENNGRLTPDLENNGRLTPHLENNGRLTPHLENNGRLTPHLENNGRLAPQLENNGRLVPH 171
Query: 121 IECNGMQKNGIQNH 134
+E NG ++N+
Sbjct: 172 LENNGRLTPHLENN 185
Score = 27.3 bits (59), Expect = 3.8
Identities = 29/134 (21%), Positives = 52/134 (38%)
Query: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
+E+ G + + N +E+ G ++E+ T +E NG + NG
Sbjct: 62 LENKGRLTPHLENNGRLTPHLENKGRLTPDLENNGCLTPHLENNGRLTPDLENNGRLTPD 121
Query: 61 VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNV 120
+E N E NG + NGR ++ G +NG + +E N +
Sbjct: 122 LENNGRLTPHLENNGRLTPHLENNGRLTPHLENNGRLAPQLENNGRLVPHLENNGRLTPH 181
Query: 121 IECNGMQKNGIQNH 134
+E NG ++N+
Sbjct: 182 LENNGPLAPHLENN 195
Score = 26.2 bits (56), Expect = 8.4
Identities = 30/134 (22%), Positives = 51/134 (38%)
Query: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
+E +G + + N +E+NG +E+K T +E NG + G
Sbjct: 32 LEHHGHLALHLENNGCLAPHVENNGRLAPHLENKGRLTPHLENNGRLTPHLENKGRLTPD 91
Query: 61 VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNV 120
+E N E NG + NGR ++ G +NG +E N +
Sbjct: 92 LENNGCLTPHLENNGRLTPDLENNGRLTPDLENNGRLTPHLENNGRLTPHLENNGRLTPH 151
Query: 121 IECNGMQKNGIQNH 134
+E NG ++N+
Sbjct: 152 LENNGRLAPQLENN 165
>gi|239755286 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 296
Score = 29.6 bits (65), Expect = 0.76
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 8/46 (17%)
Query: 1 MESNGMV-WNG----MNTNVMQPNRMESNGMEYKEMESKRMETNGM 41
MESN ++ WN N +++ NRMESNG+E+ +ME++G+
Sbjct: 1 MESNAIIEWNRHRMESNAIIIKWNRMESNGVEWNH---HQMESSGI 43
>gi|14149793 glutamine rich 2 [Homo sapiens]
Length = 1663
Score = 29.3 bits (64), Expect = 0.99
Identities = 13/53 (24%), Positives = 28/53 (52%)
Query: 24 NGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENRMECKRKERNGL 76
+GM + + + ME GM+ G ++GMG G+ +++ + +++GL
Sbjct: 307 HGMTFPGTDQRSMEPLGMDQRGCVISGMGQQGLVPPGIDQQGLTLPVVDQHGL 359
>gi|56549694 enabled homolog isoform a [Homo sapiens]
Length = 591
Score = 28.5 bits (62), Expect = 1.7
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 7 VWNGMNTNVMQPNRMESNGME-YKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENR 65
V NG + ++ R + + KE+E +R+E ME +E + ++ +E+ +
Sbjct: 131 VQNGPSQEELEIQRRQLQEQQRQKELERERLERERMERERLERERLERERLERERLEQEQ 190
Query: 66 MECKRKERNGLE 77
+E +R+ER E
Sbjct: 191 LERERQERERQE 202
>gi|39930375 enabled homolog isoform b [Homo sapiens]
Length = 570
Score = 28.5 bits (62), Expect = 1.7
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 7 VWNGMNTNVMQPNRMESNGME-YKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENR 65
V NG + ++ R + + KE+E +R+E ME +E + ++ +E+ +
Sbjct: 131 VQNGPSQEELEIQRRQLQEQQRQKELERERLERERMERERLERERLERERLERERLEQEQ 190
Query: 66 MECKRKERNGLE 77
+E +R+ER E
Sbjct: 191 LERERQERERQE 202
>gi|215599992 cyclin D binding myb-like transcription factor 1
isoform a [Homo sapiens]
Length = 760
Score = 28.5 bits (62), Expect = 1.7
Identities = 26/94 (27%), Positives = 34/94 (36%), Gaps = 18/94 (19%)
Query: 24 NGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEE-----NRMECKRKERNGLEW 78
N ++ E E KR+ EL E + T GV AV E + +C+ K N L W
Sbjct: 272 NTGKWTEEEEKRLAEVVHELTSTEPGDIVTQGVSWAAVAERVGTRSEKQCRSKWLNYLNW 331
Query: 79 ---NGIHWNGR----------ECSVMDRPGIKWN 99
G W E V D I W+
Sbjct: 332 KQSGGTEWTKEDEINLILRIAELDVADENDINWD 365
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.128 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,187,096
Number of Sequences: 37866
Number of extensions: 213544
Number of successful extensions: 1088
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 323
Number of HSP's gapped (non-prelim): 254
length of query: 134
length of database: 18,247,518
effective HSP length: 91
effective length of query: 43
effective length of database: 14,801,712
effective search space: 636473616
effective search space used: 636473616
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.