Guide to the Human Genome
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Search of human proteins with 239746801

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239746801 PREDICTED: hypothetical protein LOC139431 [Homo
sapiens]
         (213 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169217004 PREDICTED: similar to hCG1799751 [Homo sapiens]          444   e-125
gi|239752290 PREDICTED: similar to hCG1799751 [Homo sapiens]          444   e-125
gi|239746801 PREDICTED: hypothetical protein LOC139431 [Homo sap...   444   e-125
gi|13994244 ferritin, heavy polypeptide-like 17 [Homo sapiens]        215   3e-56
gi|56682959 ferritin, heavy polypeptide 1 [Homo sapiens]              214   4e-56
gi|29126241 ferritin mitochondrial [Homo sapiens]                     205   2e-53
gi|20149498 ferritin, light polypeptide [Homo sapiens]                153   1e-37
gi|169160876 PREDICTED: similar to hCG1648021 [Homo sapiens]           55   4e-08
gi|239747398 PREDICTED: similar to hCG1648021 [Homo sapiens]           55   4e-08
gi|239741224 PREDICTED: similar to hCG1648021 [Homo sapiens]           55   4e-08
gi|239753604 PREDICTED: hypothetical protein [Homo sapiens]            34   0.11 
gi|239748182 PREDICTED: hypothetical protein [Homo sapiens]            34   0.11 
gi|239742076 PREDICTED: hypothetical protein XP_002342430 [Homo ...    34   0.11 
gi|31657109 zinc finger protein 282 [Homo sapiens]                     30   1.5  
gi|24797065 zinc finger protein 212 [Homo sapiens]                     30   1.5  
gi|195947369 junction-mediating and regulatory protein [Homo sap...    29   2.6  
gi|46358366 zinc finger protein 746 [Homo sapiens]                     28   4.4  
gi|4505731 peroxisomal biogenesis factor 7 [Homo sapiens]              28   5.8  
gi|169215836 PREDICTED: similar to SEC14p-like protein TAP3 [Hom...    28   7.6  
gi|169215635 PREDICTED: similar to SEC14p-like protein TAP3 [Hom...    28   7.6  
gi|148276990 zinc finger and BTB domain containing 38 [Homo sapi...    28   7.6  
gi|224586796 G protein-coupled receptor 87 [Homo sapiens]              28   7.6  
gi|169216042 PREDICTED: similar to SEC14p-like protein TAP3 [Hom...    27   9.9  

>gi|169217004 PREDICTED: similar to hCG1799751 [Homo sapiens]
          Length = 213

 Score =  444 bits (1141), Expect = e-125
 Identities = 213/213 (100%), Positives = 213/213 (100%)

Query: 1   MASTACITIDAFKRKLAPQEGMMQNVEYCSATKKRKLSDCQRPLTAPLWQVRQNYHPDCD 60
           MASTACITIDAFKRKLAPQEGMMQNVEYCSATKKRKLSDCQRPLTAPLWQVRQNYHPDCD
Sbjct: 1   MASTACITIDAFKRKLAPQEGMMQNVEYCSATKKRKLSDCQRPLTAPLWQVRQNYHPDCD 60

Query: 61  AAVNSHVNLELHASCVYLSMAFYLDRDDVTLERFSRCFLSQSQEKREHAQKLIMLQNLRG 120
           AAVNSHVNLELHASCVYLSMAFYLDRDDVTLERFSRCFLSQSQEKREHAQKLIMLQNLRG
Sbjct: 61  AAVNSHVNLELHASCVYLSMAFYLDRDDVTLERFSRCFLSQSQEKREHAQKLIMLQNLRG 120

Query: 121 GRICLPDIWKPEREYWESGLQAMECAFHLEESVNYSLLELHYLAMEKGDPQLCDFLESHF 180
           GRICLPDIWKPEREYWESGLQAMECAFHLEESVNYSLLELHYLAMEKGDPQLCDFLESHF
Sbjct: 121 GRICLPDIWKPEREYWESGLQAMECAFHLEESVNYSLLELHYLAMEKGDPQLCDFLESHF 180

Query: 181 LNQQVKAIKELSGYLSNLRKMWATGNRPGRVPV 213
           LNQQVKAIKELSGYLSNLRKMWATGNRPGRVPV
Sbjct: 181 LNQQVKAIKELSGYLSNLRKMWATGNRPGRVPV 213


>gi|239752290 PREDICTED: similar to hCG1799751 [Homo sapiens]
          Length = 213

 Score =  444 bits (1141), Expect = e-125
 Identities = 213/213 (100%), Positives = 213/213 (100%)

Query: 1   MASTACITIDAFKRKLAPQEGMMQNVEYCSATKKRKLSDCQRPLTAPLWQVRQNYHPDCD 60
           MASTACITIDAFKRKLAPQEGMMQNVEYCSATKKRKLSDCQRPLTAPLWQVRQNYHPDCD
Sbjct: 1   MASTACITIDAFKRKLAPQEGMMQNVEYCSATKKRKLSDCQRPLTAPLWQVRQNYHPDCD 60

Query: 61  AAVNSHVNLELHASCVYLSMAFYLDRDDVTLERFSRCFLSQSQEKREHAQKLIMLQNLRG 120
           AAVNSHVNLELHASCVYLSMAFYLDRDDVTLERFSRCFLSQSQEKREHAQKLIMLQNLRG
Sbjct: 61  AAVNSHVNLELHASCVYLSMAFYLDRDDVTLERFSRCFLSQSQEKREHAQKLIMLQNLRG 120

Query: 121 GRICLPDIWKPEREYWESGLQAMECAFHLEESVNYSLLELHYLAMEKGDPQLCDFLESHF 180
           GRICLPDIWKPEREYWESGLQAMECAFHLEESVNYSLLELHYLAMEKGDPQLCDFLESHF
Sbjct: 121 GRICLPDIWKPEREYWESGLQAMECAFHLEESVNYSLLELHYLAMEKGDPQLCDFLESHF 180

Query: 181 LNQQVKAIKELSGYLSNLRKMWATGNRPGRVPV 213
           LNQQVKAIKELSGYLSNLRKMWATGNRPGRVPV
Sbjct: 181 LNQQVKAIKELSGYLSNLRKMWATGNRPGRVPV 213


>gi|239746801 PREDICTED: hypothetical protein LOC139431 [Homo
           sapiens]
          Length = 213

 Score =  444 bits (1141), Expect = e-125
 Identities = 213/213 (100%), Positives = 213/213 (100%)

Query: 1   MASTACITIDAFKRKLAPQEGMMQNVEYCSATKKRKLSDCQRPLTAPLWQVRQNYHPDCD 60
           MASTACITIDAFKRKLAPQEGMMQNVEYCSATKKRKLSDCQRPLTAPLWQVRQNYHPDCD
Sbjct: 1   MASTACITIDAFKRKLAPQEGMMQNVEYCSATKKRKLSDCQRPLTAPLWQVRQNYHPDCD 60

Query: 61  AAVNSHVNLELHASCVYLSMAFYLDRDDVTLERFSRCFLSQSQEKREHAQKLIMLQNLRG 120
           AAVNSHVNLELHASCVYLSMAFYLDRDDVTLERFSRCFLSQSQEKREHAQKLIMLQNLRG
Sbjct: 61  AAVNSHVNLELHASCVYLSMAFYLDRDDVTLERFSRCFLSQSQEKREHAQKLIMLQNLRG 120

Query: 121 GRICLPDIWKPEREYWESGLQAMECAFHLEESVNYSLLELHYLAMEKGDPQLCDFLESHF 180
           GRICLPDIWKPEREYWESGLQAMECAFHLEESVNYSLLELHYLAMEKGDPQLCDFLESHF
Sbjct: 121 GRICLPDIWKPEREYWESGLQAMECAFHLEESVNYSLLELHYLAMEKGDPQLCDFLESHF 180

Query: 181 LNQQVKAIKELSGYLSNLRKMWATGNRPGRVPV 213
           LNQQVKAIKELSGYLSNLRKMWATGNRPGRVPV
Sbjct: 181 LNQQVKAIKELSGYLSNLRKMWATGNRPGRVPV 213


>gi|13994244 ferritin, heavy polypeptide-like 17 [Homo sapiens]
          Length = 183

 Score =  215 bits (547), Expect = 3e-56
 Identities = 107/157 (68%), Positives = 126/157 (80%)

Query: 45  TAPLWQVRQNYHPDCDAAVNSHVNLELHASCVYLSMAFYLDRDDVTLERFSRCFLSQSQE 104
           TA   QVRQ Y  +CDAA+NSH+ LEL+ S +YLSMAFY +RDDV LE F R FL  S +
Sbjct: 3   TAQPSQVRQKYDTNCDAAINSHITLELYTSYLYLSMAFYFNRDDVALENFFRYFLRLSDD 62

Query: 105 KREHAQKLIMLQNLRGGRICLPDIWKPEREYWESGLQAMECAFHLEESVNYSLLELHYLA 164
           K EHAQKL+ LQNLRGG ICL DI KPE + WESGL AME AFHLE++VN SLL+L+ LA
Sbjct: 63  KMEHAQKLMRLQNLRGGHICLHDIRKPECQGWESGLVAMESAFHLEKNVNQSLLDLYQLA 122

Query: 165 MEKGDPQLCDFLESHFLNQQVKAIKELSGYLSNLRKM 201
           +EKGDPQLC FLESH+L++QVK IKEL GY+SNLRK+
Sbjct: 123 VEKGDPQLCHFLESHYLHEQVKTIKELGGYVSNLRKI 159


>gi|56682959 ferritin, heavy polypeptide 1 [Homo sapiens]
          Length = 183

 Score =  214 bits (545), Expect = 4e-56
 Identities = 104/159 (65%), Positives = 128/159 (80%)

Query: 45  TAPLWQVRQNYHPDCDAAVNSHVNLELHASCVYLSMAFYLDRDDVTLERFSRCFLSQSQE 104
           TA   QVRQNYH D +AA+N  +NLEL+AS VYLSM++Y DRDDV L+ F++ FL QS E
Sbjct: 3   TASTSQVRQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHE 62

Query: 105 KREHAQKLIMLQNLRGGRICLPDIWKPEREYWESGLQAMECAFHLEESVNYSLLELHYLA 164
           +REHA+KL+ LQN RGGRI L DI KP+ + WESGL AMECA HLE++VN SLLELH LA
Sbjct: 63  EREHAEKLMKLQNQRGGRIFLQDIKKPDCDDWESGLNAMECALHLEKNVNQSLLELHKLA 122

Query: 165 MEKGDPQLCDFLESHFLNQQVKAIKELSGYLSNLRKMWA 203
            +K DP LCDF+E+H+LN+QVKAIKEL  +++NLRKM A
Sbjct: 123 TDKNDPHLCDFIETHYLNEQVKAIKELGDHVTNLRKMGA 161


>gi|29126241 ferritin mitochondrial [Homo sapiens]
          Length = 242

 Score =  205 bits (522), Expect = 2e-53
 Identities = 101/154 (65%), Positives = 124/154 (80%)

Query: 50  QVRQNYHPDCDAAVNSHVNLELHASCVYLSMAFYLDRDDVTLERFSRCFLSQSQEKREHA 109
           +VRQN+HPD +AA+N  +NLEL+AS VYLSMA+Y  RDDV L  FSR FL QS+E+ EHA
Sbjct: 67  RVRQNFHPDSEAAINRQINLELYASYVYLSMAYYFSRDDVALNNFSRYFLHQSREETEHA 126

Query: 110 QKLIMLQNLRGGRICLPDIWKPEREYWESGLQAMECAFHLEESVNYSLLELHYLAMEKGD 169
           +KL+ LQN RGGRI L DI KPE++ WESGL AMECA  LE++VN SLLELH LA +KGD
Sbjct: 127 EKLMRLQNQRGGRIRLQDIKKPEQDDWESGLHAMECALLLEKNVNQSLLELHALASDKGD 186

Query: 170 PQLCDFLESHFLNQQVKAIKELSGYLSNLRKMWA 203
           P LCDFLE+++LN+QVK+IKEL  ++ NL KM A
Sbjct: 187 PHLCDFLETYYLNEQVKSIKELGDHVHNLVKMGA 220


>gi|20149498 ferritin, light polypeptide [Homo sapiens]
          Length = 175

 Score =  153 bits (386), Expect = 1e-37
 Identities = 76/152 (50%), Positives = 102/152 (67%)

Query: 50  QVRQNYHPDCDAAVNSHVNLELHASCVYLSMAFYLDRDDVTLERFSRCFLSQSQEKREHA 109
           Q+RQNY  D +AAVNS VNL L AS  YLS+ FY DRDDV LE  S  F   ++EKRE  
Sbjct: 4   QIRQNYSTDVEAAVNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEKREGY 63

Query: 110 QKLIMLQNLRGGRICLPDIWKPEREYWESGLQAMECAFHLEESVNYSLLELHYLAMEKGD 169
           ++L+ +QN RGGR    DI KP  + W     AM+ A  LE+ +N +LL+LH L   + D
Sbjct: 64  ERLLKMQNQRGGRALFQDIKKPAEDEWGKTPDAMKAAMALEKKLNQALLDLHALGSARTD 123

Query: 170 PQLCDFLESHFLNQQVKAIKELSGYLSNLRKM 201
           P LCDFLE+HFL+++VK IK++  +L+NL ++
Sbjct: 124 PHLCDFLETHFLDEEVKLIKKMGDHLTNLHRL 155


>gi|169160876 PREDICTED: similar to hCG1648021 [Homo sapiens]
          Length = 183

 Score = 55.1 bits (131), Expect = 4e-08
 Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 4/95 (4%)

Query: 40  CQRPLTAPLWQVRQNYHPDCDAAVNSHVNLELHASCVYLSMAFYLDRDDVTLERFSRCFL 99
           CQ  +++   Q+ QNY  + +A +N  VNL L AS + L + FY  RD+V+LE     F 
Sbjct: 90  CQPTMSS---QIHQNYSTEGEATINRLVNLHLRASYICLCLGFYSHRDNVSLEGMGH-FG 145

Query: 100 SQSQEKREHAQKLIMLQNLRGGRICLPDIWKPERE 134
             ++EKR+  ++ + +Q+  G      DI  P ++
Sbjct: 146 ELAEEKRQGTERFLKMQSQHGSCALFHDIQMPAQD 180


>gi|239747398 PREDICTED: similar to hCG1648021 [Homo sapiens]
          Length = 183

 Score = 55.1 bits (131), Expect = 4e-08
 Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 4/95 (4%)

Query: 40  CQRPLTAPLWQVRQNYHPDCDAAVNSHVNLELHASCVYLSMAFYLDRDDVTLERFSRCFL 99
           CQ  +++   Q+ QNY  + +A +N  VNL L AS + L + FY  RD+V+LE     F 
Sbjct: 90  CQPTMSS---QIHQNYSTEGEATINRLVNLHLRASYICLCLGFYSHRDNVSLEGMGH-FG 145

Query: 100 SQSQEKREHAQKLIMLQNLRGGRICLPDIWKPERE 134
             ++EKR+  ++ + +Q+  G      DI  P ++
Sbjct: 146 ELAEEKRQGTERFLKMQSQHGSCALFHDIQMPAQD 180


>gi|239741224 PREDICTED: similar to hCG1648021 [Homo sapiens]
          Length = 183

 Score = 55.1 bits (131), Expect = 4e-08
 Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 4/95 (4%)

Query: 40  CQRPLTAPLWQVRQNYHPDCDAAVNSHVNLELHASCVYLSMAFYLDRDDVTLERFSRCFL 99
           CQ  +++   Q+ QNY  + +A +N  VNL L AS + L + FY  RD+V+LE     F 
Sbjct: 90  CQPTMSS---QIHQNYSTEGEATINRLVNLHLRASYICLCLGFYSHRDNVSLEGMGH-FG 145

Query: 100 SQSQEKREHAQKLIMLQNLRGGRICLPDIWKPERE 134
             ++EKR+  ++ + +Q+  G      DI  P ++
Sbjct: 146 ELAEEKRQGTERFLKMQSQHGSCALFHDIQMPAQD 180


>gi|239753604 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 126

 Score = 33.9 bits (76), Expect = 0.11
 Identities = 29/140 (20%), Positives = 52/140 (37%), Gaps = 50/140 (35%)

Query: 49  WQVRQNYHPDCDAAVNSHVNLELHASCVYLSMAFYLDRDDVTLERFSRCFLSQSQEKREH 108
           +++   +  +C  A+N   + ELH S  YLSM                            
Sbjct: 3   YEIHGPFSEECGVAINRVASYELHISDAYLSM---------------------------- 34

Query: 109 AQKLIMLQNLRGGRICLPDIWKPEREYWESGLQAMECAFHLEESVNYSLLELHYLAMEKG 168
                                +P  + W +GLQA++ A  LE ++   L +L   A +  
Sbjct: 35  ---------------------RPNIDNWGNGLQALKFAVQLENTLTNVLQDLKITATKDD 73

Query: 169 DPQLCDFLESHFLNQQVKAI 188
           +  L DF++  F+++Q  +I
Sbjct: 74  ETGLIDFVK-EFIDKQTASI 92


>gi|239748182 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 126

 Score = 33.9 bits (76), Expect = 0.11
 Identities = 29/140 (20%), Positives = 52/140 (37%), Gaps = 50/140 (35%)

Query: 49  WQVRQNYHPDCDAAVNSHVNLELHASCVYLSMAFYLDRDDVTLERFSRCFLSQSQEKREH 108
           +++   +  +C  A+N   + ELH S  YLSM                            
Sbjct: 3   YEIHGPFSEECGVAINRVASYELHISDAYLSM---------------------------- 34

Query: 109 AQKLIMLQNLRGGRICLPDIWKPEREYWESGLQAMECAFHLEESVNYSLLELHYLAMEKG 168
                                +P  + W +GLQA++ A  LE ++   L +L   A +  
Sbjct: 35  ---------------------RPNIDNWGNGLQALKFAVQLENTLTNVLQDLKITATKDD 73

Query: 169 DPQLCDFLESHFLNQQVKAI 188
           +  L DF++  F+++Q  +I
Sbjct: 74  ETGLIDFVK-EFIDKQTASI 92


>gi|239742076 PREDICTED: hypothetical protein XP_002342430 [Homo
           sapiens]
          Length = 126

 Score = 33.9 bits (76), Expect = 0.11
 Identities = 29/140 (20%), Positives = 52/140 (37%), Gaps = 50/140 (35%)

Query: 49  WQVRQNYHPDCDAAVNSHVNLELHASCVYLSMAFYLDRDDVTLERFSRCFLSQSQEKREH 108
           +++   +  +C  A+N   + ELH S  YLSM                            
Sbjct: 3   YEIHGPFSEECGVAINRVASYELHISDAYLSM---------------------------- 34

Query: 109 AQKLIMLQNLRGGRICLPDIWKPEREYWESGLQAMECAFHLEESVNYSLLELHYLAMEKG 168
                                +P  + W +GLQA++ A  LE ++   L +L   A +  
Sbjct: 35  ---------------------RPNIDNWGNGLQALKFAVQLENTLTNVLQDLKITATKDD 73

Query: 169 DPQLCDFLESHFLNQQVKAI 188
           +  L DF++  F+++Q  +I
Sbjct: 74  ETGLIDFVK-EFIDKQTASI 92


>gi|31657109 zinc finger protein 282 [Homo sapiens]
          Length = 671

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 13/39 (33%), Positives = 23/39 (58%)

Query: 4   TACITIDAFKRKLAPQEGMMQNVEYCSATKKRKLSDCQR 42
           T    I A +RK+  Q   + N+E  + T ++KL+DC++
Sbjct: 100 TVVAAIQAVERKVDAQASQLLNLEGRTGTAEKKLADCEK 138


>gi|24797065 zinc finger protein 212 [Homo sapiens]
          Length = 495

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 12/39 (30%), Positives = 24/39 (61%)

Query: 4  TACITIDAFKRKLAPQEGMMQNVEYCSATKKRKLSDCQR 42
          T    I A ++K+  Q   +Q++E  + T ++KL+DC++
Sbjct: 43 TVVAAIQAVEKKMESQAARLQSLEGRTGTAEKKLADCEK 81


>gi|195947369 junction-mediating and regulatory protein [Homo
           sapiens]
          Length = 988

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 5/70 (7%)

Query: 104 EKREHAQKLIMLQNLRGGRICLPDIWKPEREYWESGLQAMECAFHL---EESVNYSLLE- 159
           E+R+HA K  M Q+LRGG   +  + + E +Y++  LQ  E  F +   EE +  + LE 
Sbjct: 500 EQRKHALKEEM-QSLRGGTEAIARLDQLEADYYDLQLQLYEVQFEILKCEELLLTAQLES 558

Query: 160 LHYLAMEKGD 169
           +  L  EK D
Sbjct: 559 IKRLISEKRD 568


>gi|46358366 zinc finger protein 746 [Homo sapiens]
          Length = 644

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 12/39 (30%), Positives = 23/39 (58%)

Query: 4  TACITIDAFKRKLAPQEGMMQNVEYCSATKKRKLSDCQR 42
          T   TI A +RK+  Q   + ++E  +   ++KL+DC++
Sbjct: 13 TMAATIQAMERKIESQAARLLSLEGRTGMAEKKLADCEK 51


>gi|4505731 peroxisomal biogenesis factor 7 [Homo sapiens]
          Length = 323

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 2/58 (3%)

Query: 103 QEKREHAQKLIMLQ--NLRGGRICLPDIWKPEREYWESGLQAMECAFHLEESVNYSLL 158
           Q  +EHAQ++  +     RG ++ +   W    + W+  +    C F   ES+ YS +
Sbjct: 105 QVYKEHAQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDPTVGKSLCTFRGHESIIYSTI 162


>gi|169215836 PREDICTED: similar to SEC14p-like protein TAP3 [Homo
           sapiens]
          Length = 397

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 2/47 (4%)

Query: 101 QSQEKREHAQKLIMLQNLRGGRICLPDIWKPEREYWESGLQAMECAF 147
           QSQ+  +  +K+I +  L G  + L D+WKP  E  +    A+E  +
Sbjct: 138 QSQKLGKRVEKIIAIFGLEG--LGLRDLWKPGIELLQEFFSALEANY 182


>gi|169215635 PREDICTED: similar to SEC14p-like protein TAP3 [Homo
           sapiens]
          Length = 397

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 2/47 (4%)

Query: 101 QSQEKREHAQKLIMLQNLRGGRICLPDIWKPEREYWESGLQAMECAF 147
           QSQ+  +  +K+I +  L G  + L D+WKP  E  +    A+E  +
Sbjct: 138 QSQKLGKRVEKIIAIFGLEG--LGLRDLWKPGIELLQEFFSALEANY 182


>gi|148276990 zinc finger and BTB domain containing 38 [Homo
           sapiens]
          Length = 1195

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 12/44 (27%), Positives = 22/44 (50%)

Query: 129 WKPEREYWESGLQAMECAFHLEESVNYSLLELHYLAMEKGDPQL 172
           ++   E W +G +  +C F LE  + Y +L+ H  +    D +L
Sbjct: 502 YRTRHEIWHTGERRYQCIFCLETFMTYYILKNHQKSFHAIDHRL 545


>gi|224586796 G protein-coupled receptor 87 [Homo sapiens]
          Length = 358

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 4/54 (7%)

Query: 63  VNSHVNLELHASCVYLSMAFYLDRDDVTLERF----SRCFLSQSQEKREHAQKL 112
           V  H  +    SC+++++   L    + + R+    SR F+SQS  KR+H Q +
Sbjct: 201 VKWHTAVTYVNSCLFVAVLVILIGCYIAISRYIHKSSRQFISQSSRKRKHNQSI 254


>gi|169216042 PREDICTED: similar to SEC14p-like protein TAP3 [Homo
           sapiens]
          Length = 397

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 2/47 (4%)

Query: 101 QSQEKREHAQKLIMLQNLRGGRICLPDIWKPEREYWESGLQAMECAF 147
           QSQ+  +  +K+I +  L G  + L D+WKP  E  +    A+E  +
Sbjct: 138 QSQKLGKKVEKIIAIFGLEG--LGLRDLWKPGIELLQEFFSALEANY 182


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.134    0.418 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,464,747
Number of Sequences: 37866
Number of extensions: 352954
Number of successful extensions: 847
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 827
Number of HSP's gapped (non-prelim): 26
length of query: 213
length of database: 18,247,518
effective HSP length: 98
effective length of query: 115
effective length of database: 14,536,650
effective search space: 1671714750
effective search space used: 1671714750
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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