Search of human proteins with 239746069

Search of human proteins with 239746069

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239746069 PREDICTED: hypothetical protein XP_002343649 [Homo
sapiens]
         (140 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239746069 PREDICTED: hypothetical protein XP_002343649 [Homo ...   275   7e-75
gi|239746071 PREDICTED: hypothetical protein XP_002343650 [Homo ...   236   5e-63
gi|13128864 histone deacetylase 6 [Homo sapiens]                       50   5e-07
gi|239748993 PREDICTED: hypothetical protein XP_002346876 [Homo ...    41   3e-04
gi|239743015 PREDICTED: hypothetical protein XP_002342718 [Homo ...    41   3e-04
gi|150170701 hypothetical protein LOC391343 [Homo sapiens]             36   0.009
gi|239748997 PREDICTED: hypothetical protein XP_002346878 [Homo ...    33   0.076
gi|239743019 PREDICTED: hypothetical protein XP_002342720 [Homo ...    33   0.076
gi|239508790 PREDICTED: hypothetical protein, partial [Homo sapi...    30   0.49 
gi|4503475 eukaryotic translation elongation factor 1 alpha 2 [H...    29   1.4  
gi|239750169 PREDICTED: hypothetical protein XP_002347312 [Homo ...    28   2.5  

>gi|239746069 PREDICTED: hypothetical protein XP_002343649 [Homo
           sapiens]
          Length = 140

 Score =  275 bits (704), Expect = 7e-75
 Identities = 140/140 (100%), Positives = 140/140 (100%)

Query: 1   MTVERHSVVAPGGKMIVERHSAVAPGGKMIVESHSAVAPGGKMIVESHSAVAPGGRMIVE 60
           MTVERHSVVAPGGKMIVERHSAVAPGGKMIVESHSAVAPGGKMIVESHSAVAPGGRMIVE
Sbjct: 1   MTVERHSVVAPGGKMIVERHSAVAPGGKMIVESHSAVAPGGKMIVESHSAVAPGGRMIVE 60

Query: 61  RHSAVAPGGKMIVESHSAVAPGGRMIVERHSVVALGGRMIVKRHSAVAPGGKMIVERHSA 120
           RHSAVAPGGKMIVESHSAVAPGGRMIVERHSVVALGGRMIVKRHSAVAPGGKMIVERHSA
Sbjct: 61  RHSAVAPGGKMIVESHSAVAPGGRMIVERHSVVALGGRMIVKRHSAVAPGGKMIVERHSA 120

Query: 121 VAPGGRMIVERHSVVAPVGG 140
           VAPGGRMIVERHSVVAPVGG
Sbjct: 121 VAPGGRMIVERHSVVAPVGG 140


>gi|239746071 PREDICTED: hypothetical protein XP_002343650 [Homo
           sapiens]
          Length = 168

 Score =  236 bits (602), Expect = 5e-63
 Identities = 124/154 (80%), Positives = 130/154 (84%), Gaps = 14/154 (9%)

Query: 1   MTVERHSVVAPGGKMIVERHSAVAPGGKMIVESHSAVAPGGKMIVESHSAVAPGGRMIVE 60
           M VERHSVVAPGGKMIVERHSAVAP GKM VE HSAVAP G+MIVE HSAVAPGGRMIVE
Sbjct: 15  MIVERHSVVAPGGKMIVERHSAVAPAGKMTVERHSAVAPAGRMIVERHSAVAPGGRMIVE 74

Query: 61  RHSAVAPGGKMIVESHSAVAPGGRMIVERHSVVALGGRMIVKRHSAVAPGGKMIVERHS- 119
            HSAVAPGG+MIVESHSAVAPGGRMIVERHSVVALGGR+I++RHS VA GG+MIVERHS 
Sbjct: 75  SHSAVAPGGRMIVESHSAVAPGGRMIVERHSVVALGGRVILERHSVVALGGRMIVERHSV 134

Query: 120 -------------AVAPGGRMIVERHSVVAPVGG 140
                        AVAPGGRMIVERHS VAPVGG
Sbjct: 135 VALGGRVILERHSAVAPGGRMIVERHSAVAPVGG 168


>gi|13128864 histone deacetylase 6 [Homo sapiens]
          Length = 1215

 Score = 50.4 bits (119), Expect = 5e-07
 Identities = 33/116 (28%), Positives = 57/116 (49%)

Query: 1    MTVERHSVVAPGGKMIVERHSAVAPGGKMIVESHSAVAPGGKMIVESHSAVAPGGRMIVE 60
            +T ++ S  A GG  + +  S  A GG M+ ++ S  A GG    ++ S    GG ++ +
Sbjct: 905  LTQDQPSEAATGGATLAQTISEAAIGGAMLGQTTSEEAVGGATPDQTTSEETVGGAILDQ 964

Query: 61   RHSAVAPGGKMIVESHSAVAPGGRMIVERHSVVALGGRMIVKRHSAVAPGGKMIVE 116
              S  A GG  + ++ S  A GG  + +  S  A+ G  + +  S  APGG  +++
Sbjct: 965  TTSEDAVGGATLGQTTSEEAVGGATLAQTTSEAAMEGATLDQTTSEEAPGGTELIQ 1020



 Score = 48.5 bits (114), Expect = 2e-06
 Identities = 32/113 (28%), Positives = 55/113 (48%)

Query: 18   ERHSAVAPGGKMIVESHSAVAPGGKMIVESHSAVAPGGRMIVERHSAVAPGGKMIVESHS 77
            ++ S  A GG  + ++ S  A GG M+ ++ S  A GG    +  S    GG ++ ++ S
Sbjct: 908  DQPSEAATGGATLAQTISEAAIGGAMLGQTTSEEAVGGATPDQTTSEETVGGAILDQTTS 967

Query: 78   AVAPGGRMIVERHSVVALGGRMIVKRHSAVAPGGKMIVERHSAVAPGGRMIVE 130
              A GG  + +  S  A+GG  + +  S  A  G  + +  S  APGG  +++
Sbjct: 968  EDAVGGATLGQTTSEEAVGGATLAQTTSEAAMEGATLDQTTSEEAPGGTELIQ 1020



 Score = 42.0 bits (97), Expect = 2e-04
 Identities = 31/105 (29%), Positives = 48/105 (45%)

Query: 35   SAVAPGGKMIVESHSAVAPGGRMIVERHSAVAPGGKMIVESHSAVAPGGRMIVERHSVVA 94
            S  A GG  + ++ S  A GG M+ +  S  A GG    ++ S    GG ++ +  S  A
Sbjct: 911  SEAATGGATLAQTISEAAIGGAMLGQTTSEEAVGGATPDQTTSEETVGGAILDQTTSEDA 970

Query: 95   LGGRMIVKRHSAVAPGGKMIVERHSAVAPGGRMIVERHSVVAPVG 139
            +GG  + +  S  A GG  + +  S  A  G  + +  S  AP G
Sbjct: 971  VGGATLGQTTSEEAVGGATLAQTTSEAAMEGATLDQTTSEEAPGG 1015



 Score = 32.3 bits (72), Expect = 0.13
 Identities = 18/64 (28%), Positives = 33/64 (51%)

Query: 12   GGKMIVERHSAVAPGGKMIVESHSAVAPGGKMIVESHSAVAPGGRMIVERHSAVAPGGKM 71
            GG ++ +  S  A GG  + ++ S  A GG  + ++ S  A  G  + +  S  APGG  
Sbjct: 958  GGAILDQTTSEDAVGGATLGQTTSEEAVGGATLAQTTSEAAMEGATLDQTTSEEAPGGTE 1017

Query: 72   IVES 75
            ++++
Sbjct: 1018 LIQT 1021



 Score = 32.0 bits (71), Expect = 0.17
 Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 1/81 (1%)

Query: 60  ERHSAVAPGGKMIVESHSAVAPGGRMIVERHSVVALGGRMIVKRHSAVAPGGKMIVERHS 119
           ++ S  A GG  + ++ S  A GG M+ +  S  A+GG    +  S    GG ++ +  S
Sbjct: 908 DQPSEAATGGATLAQTISEAAIGGAMLGQTTSEEAVGGATPDQTTSEETVGGAILDQTTS 967

Query: 120 AVAPGGRMIVERHSVVAPVGG 140
             A GG  + +  S  A VGG
Sbjct: 968 EDAVGGATLGQTTSEEA-VGG 987


>gi|239748993 PREDICTED: hypothetical protein XP_002346876 [Homo
           sapiens]
          Length = 552

 Score = 41.2 bits (95), Expect = 3e-04
 Identities = 25/99 (25%), Positives = 43/99 (43%)

Query: 34  HSAVAPGGKMIVESHSAVAPGGRMIVERHSAVAPGGKMIVESHSAVAPGGRMIVERHSVV 93
           H+   P   +I   H+   P   +I   H+   P   +I   H+   P  ++I  RH+  
Sbjct: 154 HACGKPRALLIPMHHACGKPRALLIPMHHACGKPQAPLIPMHHACGKPRDQLIPMRHACG 213

Query: 94  ALGGRMIVKRHSAVAPGGKMIVERHSAVAPGGRMIVERH 132
               ++I  RH+   P  ++I  RH+   P  ++I  RH
Sbjct: 214 KPRDQLIPMRHACRKPRDQLIPMRHACGKPRDQLIPMRH 252



 Score = 38.5 bits (88), Expect = 0.002
 Identities = 24/99 (24%), Positives = 42/99 (42%)

Query: 6   HSVVAPGGKMIVERHSAVAPGGKMIVESHSAVAPGGKMIVESHSAVAPGGRMIVERHSAV 65
           H+   P   +I   H+   P   +I   H+   P   +I   H+   P  ++I  RH+  
Sbjct: 154 HACGKPRALLIPMHHACGKPRALLIPMHHACGKPQAPLIPMHHACGKPRDQLIPMRHACG 213

Query: 66  APGGKMIVESHSAVAPGGRMIVERHSVVALGGRMIVKRH 104
            P  ++I   H+   P  ++I  RH+      ++I  RH
Sbjct: 214 KPRDQLIPMRHACRKPRDQLIPMRHACGKPRDQLIPMRH 252



 Score = 38.5 bits (88), Expect = 0.002
 Identities = 24/99 (24%), Positives = 42/99 (42%)

Query: 20  HSAVAPGGKMIVESHSAVAPGGKMIVESHSAVAPGGRMIVERHSAVAPGGKMIVESHSAV 79
           H+   P   +I   H+   P   +I   H+   P   +I   H+   P  ++I   H+  
Sbjct: 154 HACGKPRALLIPMHHACGKPRALLIPMHHACGKPQAPLIPMHHACGKPRDQLIPMRHACG 213

Query: 80  APGGRMIVERHSVVALGGRMIVKRHSAVAPGGKMIVERH 118
            P  ++I  RH+      ++I  RH+   P  ++I  RH
Sbjct: 214 KPRDQLIPMRHACRKPRDQLIPMRHACGKPRDQLIPMRH 252



 Score = 35.8 bits (81), Expect = 0.012
 Identities = 22/90 (24%), Positives = 38/90 (42%)

Query: 48  HSAVAPGGRMIVERHSAVAPGGKMIVESHSAVAPGGRMIVERHSVVALGGRMIVKRHSAV 107
           H+   P   +I   H+   P   +I   H+   P   +I   H+      ++I  RH+  
Sbjct: 154 HACGKPRALLIPMHHACGKPRALLIPMHHACGKPQAPLIPMHHACGKPRDQLIPMRHACG 213

Query: 108 APGGKMIVERHSAVAPGGRMIVERHSVVAP 137
            P  ++I  RH+   P  ++I  RH+   P
Sbjct: 214 KPRDQLIPMRHACRKPRDQLIPMRHACGKP 243



 Score = 29.6 bits (65), Expect = 0.84
 Identities = 20/90 (22%), Positives = 34/90 (37%)

Query: 48  HSAVAPGGRMIVERHSAVAPGGKMIVESHSAVAPGGRMIVERHSVVALGGRMIVKRHSAV 107
           H+   P        H+   P   +I   H+   P   +I   H+       +I   H+  
Sbjct: 140 HACGKPRALCSPMHHACGKPRALLIPMHHACGKPRALLIPMHHACGKPQAPLIPMHHACG 199

Query: 108 APGGKMIVERHSAVAPGGRMIVERHSVVAP 137
            P  ++I  RH+   P  ++I  RH+   P
Sbjct: 200 KPRDQLIPMRHACGKPRDQLIPMRHACRKP 229


>gi|239743015 PREDICTED: hypothetical protein XP_002342718 [Homo
           sapiens]
          Length = 552

 Score = 41.2 bits (95), Expect = 3e-04
 Identities = 25/99 (25%), Positives = 43/99 (43%)

Query: 34  HSAVAPGGKMIVESHSAVAPGGRMIVERHSAVAPGGKMIVESHSAVAPGGRMIVERHSVV 93
           H+   P   +I   H+   P   +I   H+   P   +I   H+   P  ++I  RH+  
Sbjct: 154 HACGKPRALLIPMHHACGKPRALLIPMHHACGKPQAPLIPMHHACGKPRDQLIPMRHACG 213

Query: 94  ALGGRMIVKRHSAVAPGGKMIVERHSAVAPGGRMIVERH 132
               ++I  RH+   P  ++I  RH+   P  ++I  RH
Sbjct: 214 KPRDQLIPMRHACRKPRDQLIPMRHACGKPRDQLIPMRH 252



 Score = 38.5 bits (88), Expect = 0.002
 Identities = 24/99 (24%), Positives = 42/99 (42%)

Query: 6   HSVVAPGGKMIVERHSAVAPGGKMIVESHSAVAPGGKMIVESHSAVAPGGRMIVERHSAV 65
           H+   P   +I   H+   P   +I   H+   P   +I   H+   P  ++I  RH+  
Sbjct: 154 HACGKPRALLIPMHHACGKPRALLIPMHHACGKPQAPLIPMHHACGKPRDQLIPMRHACG 213

Query: 66  APGGKMIVESHSAVAPGGRMIVERHSVVALGGRMIVKRH 104
            P  ++I   H+   P  ++I  RH+      ++I  RH
Sbjct: 214 KPRDQLIPMRHACRKPRDQLIPMRHACGKPRDQLIPMRH 252



 Score = 38.5 bits (88), Expect = 0.002
 Identities = 24/99 (24%), Positives = 42/99 (42%)

Query: 20  HSAVAPGGKMIVESHSAVAPGGKMIVESHSAVAPGGRMIVERHSAVAPGGKMIVESHSAV 79
           H+   P   +I   H+   P   +I   H+   P   +I   H+   P  ++I   H+  
Sbjct: 154 HACGKPRALLIPMHHACGKPRALLIPMHHACGKPQAPLIPMHHACGKPRDQLIPMRHACG 213

Query: 80  APGGRMIVERHSVVALGGRMIVKRHSAVAPGGKMIVERH 118
            P  ++I  RH+      ++I  RH+   P  ++I  RH
Sbjct: 214 KPRDQLIPMRHACRKPRDQLIPMRHACGKPRDQLIPMRH 252



 Score = 37.0 bits (84), Expect = 0.005
 Identities = 30/134 (22%), Positives = 51/134 (38%), Gaps = 3/134 (2%)

Query: 4   ERHSVVAPGGKMIVERHSAVAPGGKMIVESHSAVAPGGKMIVESHSAVAPGGRMIVERHS 63
           +R   +AP   M   R++   P        H+   P        H+   P   +I   H+
Sbjct: 113 KRWEALAPRSPM---RYACGKPQALCSPMHHACGKPRALCSPMHHACGKPRALLIPMHHA 169

Query: 64  AVAPGGKMIVESHSAVAPGGRMIVERHSVVALGGRMIVKRHSAVAPGGKMIVERHSAVAP 123
              P   +I   H+   P   +I   H+      ++I  RH+   P  ++I  RH+   P
Sbjct: 170 CGKPRALLIPMHHACGKPQAPLIPMHHACGKPRDQLIPMRHACGKPRDQLIPMRHACRKP 229

Query: 124 GGRMIVERHSVVAP 137
             ++I  RH+   P
Sbjct: 230 RDQLIPMRHACGKP 243


>gi|150170701 hypothetical protein LOC391343 [Homo sapiens]
          Length = 215

 Score = 36.2 bits (82), Expect = 0.009
 Identities = 23/115 (20%), Positives = 51/115 (44%)

Query: 12  GGKMIVERHSAVAPGGKMIVESHSAVAPGGKMIVESHSAVAPGGRMIVERHSAVAPGGKM 71
           GG+  ++  +    GG+  ++  +    GG+  ++  +    GGR  ++  +    GG+ 
Sbjct: 52  GGREEMKHQTQCRRGGREDLKHQTQCRRGGREEMKDQTQCRRGGREEMKHQTHCRRGGRE 111

Query: 72  IVESHSAVAPGGRMIVERHSVVALGGRMIVKRHSAVAPGGKMIVERHSAVAPGGR 126
            ++  +    GGR  ++  +    GGR  +K  +    GG+  ++  +    GGR
Sbjct: 112 EMKHQTQCRRGGREEMKHQTQCRRGGREEMKHQTQCRRGGREEMKHQTQCRRGGR 166



 Score = 36.2 bits (82), Expect = 0.009
 Identities = 23/115 (20%), Positives = 51/115 (44%)

Query: 12  GGKMIVERHSAVAPGGKMIVESHSAVAPGGKMIVESHSAVAPGGRMIVERHSAVAPGGKM 71
           GG+  ++  +    GG+  ++  +    GG+  ++  +    GGR  ++  +    GG+ 
Sbjct: 66  GGREDLKHQTQCRRGGREEMKDQTQCRRGGREEMKHQTHCRRGGREEMKHQTQCRRGGRE 125

Query: 72  IVESHSAVAPGGRMIVERHSVVALGGRMIVKRHSAVAPGGKMIVERHSAVAPGGR 126
            ++  +    GGR  ++  +    GGR  +K  +    GG+  ++  +    GGR
Sbjct: 126 EMKHQTQCRRGGREEMKHQTQCRRGGREEMKHQTQCRRGGREDLKHQTQCRRGGR 180



 Score = 35.0 bits (79), Expect = 0.020
 Identities = 23/115 (20%), Positives = 51/115 (44%)

Query: 12  GGKMIVERHSAVAPGGKMIVESHSAVAPGGKMIVESHSAVAPGGRMIVERHSAVAPGGKM 71
           GG+  ++  +    GG+  ++  +    GG+  ++  +    GGR  ++  +    GG+ 
Sbjct: 38  GGREEMKHQTQCRRGGREEMKHQTQCRRGGREDLKHQTQCRRGGREEMKDQTQCRRGGRE 97

Query: 72  IVESHSAVAPGGRMIVERHSVVALGGRMIVKRHSAVAPGGKMIVERHSAVAPGGR 126
            ++  +    GGR  ++  +    GGR  +K  +    GG+  ++  +    GGR
Sbjct: 98  EMKHQTHCRRGGREEMKHQTQCRRGGREEMKHQTQCRRGGREEMKHQTQCRRGGR 152



 Score = 32.3 bits (72), Expect = 0.13
 Identities = 22/114 (19%), Positives = 50/114 (43%)

Query: 12  GGKMIVERHSAVAPGGKMIVESHSAVAPGGKMIVESHSAVAPGGRMIVERHSAVAPGGKM 71
           GG+  ++  +    GG+  ++  +    GG+  ++  +    GGR  ++  +    GG+ 
Sbjct: 80  GGREEMKDQTQCRRGGREEMKHQTHCRRGGREEMKHQTQCRRGGREEMKHQTQCRRGGRE 139

Query: 72  IVESHSAVAPGGRMIVERHSVVALGGRMIVKRHSAVAPGGKMIVERHSAVAPGG 125
            ++  +    GGR  ++  +    GGR  +K  +    GG+  ++  +    GG
Sbjct: 140 EMKHQTQCRRGGREEMKHQTQCRRGGREDLKHQTQCRRGGREEMKDQTQCRRGG 193


>gi|239748997 PREDICTED: hypothetical protein XP_002346878 [Homo
           sapiens]
          Length = 297

 Score = 33.1 bits (74), Expect = 0.076
 Identities = 35/137 (25%), Positives = 49/137 (35%), Gaps = 12/137 (8%)

Query: 1   MTVERHSVVAPGGKMIVERHSAVAPGGKMIVESHSAVAPGGKMIVESHSAVAPGGRMIVE 60
           + VE  S+    G + VE  S     G + VE       GG  + E    V  G   + E
Sbjct: 139 LQVEERSLQVEEGSLQVEEGSLQVEEGDLQVEE------GGLQVEEGSLQVEEGSLHVEE 192

Query: 61  RHSAVAPGGKMIVESHSAVAPGGRMIVE------RHSVVALGGRMIVKRHSAVAPGGKMI 114
               V  GG  + E    V  GG  + E      R +    GG  + +    V  GG  +
Sbjct: 193 GDLHVEEGGLQVEEGTLHVEEGGLQVEEGACRWRRGAADGGGGLQMEEGGLQVEEGGLQV 252

Query: 115 VERHSAVAPGGRMIVER 131
            +    V  GG  + ER
Sbjct: 253 EKGGLQVEKGGLQVEER 269



 Score = 32.3 bits (72), Expect = 0.13
 Identities = 34/142 (23%), Positives = 47/142 (33%), Gaps = 5/142 (3%)

Query: 4   ERHSVVAPGGKMIVERHSAVAPGGKMIVESHSAVAPGGKMIVESHSAVAPGGRMIVERHS 63
           ER   V      + ER   V      + E    V  G   + E    V  GG  + E   
Sbjct: 122 ERSLQVEEKSLQVEERSLQVEERSLQVEEGSLQVEEGSLQVEEGDLQVEEGGLQVEEGSL 181

Query: 64  AVAPGGKMIVESHSAVAPGGRMIVERHSVVALGGRMIVK-----RHSAVAPGGKMIVERH 118
            V  G   + E    V  GG  + E    V  GG  + +     R  A   GG + +E  
Sbjct: 182 QVEEGSLHVEEGDLHVEEGGLQVEEGTLHVEEGGLQVEEGACRWRRGAADGGGGLQMEEG 241

Query: 119 SAVAPGGRMIVERHSVVAPVGG 140
                 G + VE+  +    GG
Sbjct: 242 GLQVEEGGLQVEKGGLQVEKGG 263



 Score = 30.8 bits (68), Expect = 0.38
 Identities = 33/131 (25%), Positives = 46/131 (35%), Gaps = 1/131 (0%)

Query: 1   MTVERHSVVAPGGKMIVERHSAVAPGGKMIVESHSAVAPGGKMIVESHSAVAPGGRMIVE 60
           + VE  S+    G + VE+ S       + VE  S       + VE  S       + VE
Sbjct: 90  LQVEEKSLQVEEGSLQVEKKSLQVEERSLQVEERSLQVEEKSLQVEERSLQVEERSLQVE 149

Query: 61  RHSA-VAPGGKMIVESHSAVAPGGRMIVERHSVVALGGRMIVKRHSAVAPGGKMIVERHS 119
             S  V  G   + E    V  GG  + E    V  G   + +    V  GG  + E   
Sbjct: 150 EGSLQVEEGSLQVEEGDLQVEEGGLQVEEGSLQVEEGSLHVEEGDLHVEEGGLQVEEGTL 209

Query: 120 AVAPGGRMIVE 130
            V  GG  + E
Sbjct: 210 HVEEGGLQVEE 220



 Score = 28.9 bits (63), Expect = 1.4
 Identities = 29/110 (26%), Positives = 41/110 (37%), Gaps = 7/110 (6%)

Query: 1   MTVERHSVVAPGGKMIVERHSA-VAPGGKMIVESHSAVAPGGKMIVESH------SAVAP 53
           + VE  S+    G + VE     V  GG  + E    V  GG  + E        +A   
Sbjct: 174 LQVEEGSLQVEEGSLHVEEGDLHVEEGGLQVEEGTLHVEEGGLQVEEGACRWRRGAADGG 233

Query: 54  GGRMIVERHSAVAPGGKMIVESHSAVAPGGRMIVERHSVVALGGRMIVKR 103
           GG  + E    V  GG  + +    V  GG  + ER   V  G   + +R
Sbjct: 234 GGLQMEEGGLQVEEGGLQVEKGGLQVEKGGLQVEERDLQVEEGSLQVEER 283


>gi|239743019 PREDICTED: hypothetical protein XP_002342720 [Homo
           sapiens]
          Length = 487

 Score = 33.1 bits (74), Expect = 0.076
 Identities = 35/137 (25%), Positives = 49/137 (35%), Gaps = 12/137 (8%)

Query: 1   MTVERHSVVAPGGKMIVERHSAVAPGGKMIVESHSAVAPGGKMIVESHSAVAPGGRMIVE 60
           + VE  S+    G + VE  S     G + VE       GG  + E    V  G   + E
Sbjct: 329 LQVEERSLQVEEGSLQVEEGSLQVEEGDLQVEE------GGLQVEEGSLQVEEGSLHVEE 382

Query: 61  RHSAVAPGGKMIVESHSAVAPGGRMIVE------RHSVVALGGRMIVKRHSAVAPGGKMI 114
               V  GG  + E    V  GG  + E      R +    GG  + +    V  GG  +
Sbjct: 383 GDLHVEEGGLQVEEGTLHVEEGGLQVEEGACRWRRGAADGGGGLQMEEGGLQVEEGGLQV 442

Query: 115 VERHSAVAPGGRMIVER 131
            +    V  GG  + ER
Sbjct: 443 EKGGLQVEKGGLQVEER 459



 Score = 32.3 bits (72), Expect = 0.13
 Identities = 34/142 (23%), Positives = 47/142 (33%), Gaps = 5/142 (3%)

Query: 4   ERHSVVAPGGKMIVERHSAVAPGGKMIVESHSAVAPGGKMIVESHSAVAPGGRMIVERHS 63
           ER   V      + ER   V      + E    V  G   + E    V  GG  + E   
Sbjct: 312 ERSLQVEEKSLQVEERSLQVEERSLQVEEGSLQVEEGSLQVEEGDLQVEEGGLQVEEGSL 371

Query: 64  AVAPGGKMIVESHSAVAPGGRMIVERHSVVALGGRMIVK-----RHSAVAPGGKMIVERH 118
            V  G   + E    V  GG  + E    V  GG  + +     R  A   GG + +E  
Sbjct: 372 QVEEGSLHVEEGDLHVEEGGLQVEEGTLHVEEGGLQVEEGACRWRRGAADGGGGLQMEEG 431

Query: 119 SAVAPGGRMIVERHSVVAPVGG 140
                 G + VE+  +    GG
Sbjct: 432 GLQVEEGGLQVEKGGLQVEKGG 453



 Score = 30.8 bits (68), Expect = 0.38
 Identities = 33/131 (25%), Positives = 46/131 (35%), Gaps = 1/131 (0%)

Query: 1   MTVERHSVVAPGGKMIVERHSAVAPGGKMIVESHSAVAPGGKMIVESHSAVAPGGRMIVE 60
           + VE  S+    G + VE+ S       + VE  S       + VE  S       + VE
Sbjct: 280 LQVEEKSLQVEEGSLQVEKKSLQVEERSLQVEERSLQVEEKSLQVEERSLQVEERSLQVE 339

Query: 61  RHSA-VAPGGKMIVESHSAVAPGGRMIVERHSVVALGGRMIVKRHSAVAPGGKMIVERHS 119
             S  V  G   + E    V  GG  + E    V  G   + +    V  GG  + E   
Sbjct: 340 EGSLQVEEGSLQVEEGDLQVEEGGLQVEEGSLQVEEGSLHVEEGDLHVEEGGLQVEEGTL 399

Query: 120 AVAPGGRMIVE 130
            V  GG  + E
Sbjct: 400 HVEEGGLQVEE 410



 Score = 28.9 bits (63), Expect = 1.4
 Identities = 29/110 (26%), Positives = 41/110 (37%), Gaps = 7/110 (6%)

Query: 1   MTVERHSVVAPGGKMIVERHSA-VAPGGKMIVESHSAVAPGGKMIVESH------SAVAP 53
           + VE  S+    G + VE     V  GG  + E    V  GG  + E        +A   
Sbjct: 364 LQVEEGSLQVEEGSLHVEEGDLHVEEGGLQVEEGTLHVEEGGLQVEEGACRWRRGAADGG 423

Query: 54  GGRMIVERHSAVAPGGKMIVESHSAVAPGGRMIVERHSVVALGGRMIVKR 103
           GG  + E    V  GG  + +    V  GG  + ER   V  G   + +R
Sbjct: 424 GGLQMEEGGLQVEEGGLQVEKGGLQVEKGGLQVEERDLQVEEGSLQVEER 473


>gi|239508790 PREDICTED: hypothetical protein, partial [Homo
           sapiens]
          Length = 490

 Score = 30.4 bits (67), Expect = 0.49
 Identities = 19/89 (21%), Positives = 42/89 (47%), Gaps = 1/89 (1%)

Query: 6   HSVVAPGGKMIVERHSAVAPGGKMIVESHSAVAPGGKMIVESHSAVAPGGRMIVERHSAV 65
           +SVV+P   ++   H  V+    ++      V+P   + V  H  V+P   ++   H  +
Sbjct: 14  YSVVSPHCPLVPPHHPLVSLHHPLVSPHFPLVSPHHPL-VSLHHPVSPHFPLVSPHHPLM 72

Query: 66  APGGKMIVESHSAVAPGGRMIVERHSVVA 94
           +P   ++   +S V+P   ++   +S+V+
Sbjct: 73  SPHYSLVSPQYSPVSPHCPLVSPHYSLVS 101



 Score = 29.6 bits (65), Expect = 0.84
 Identities = 20/101 (19%), Positives = 47/101 (46%), Gaps = 1/101 (0%)

Query: 23  VAPGGKMIVESHSAVAPGGKMIVESHSAVAPGGRMIVERHSAVAPGGKMIVESHSAVAPG 82
           V+P   ++   +S V+P   ++   H  V+    ++      V+P   + V  H  V+P 
Sbjct: 3   VSPYCPVVSTHYSVVSPHCPLVPPHHPLVSLHHPLVSPHFPLVSPHHPL-VSLHHPVSPH 61

Query: 83  GRMIVERHSVVALGGRMIVKRHSAVAPGGKMIVERHSAVAP 123
             ++   H +++    ++  ++S V+P   ++   +S V+P
Sbjct: 62  FPLVSPHHPLMSPHYSLVSPQYSPVSPHCPLVSPHYSLVSP 102



 Score = 29.6 bits (65), Expect = 0.84
 Identities = 20/101 (19%), Positives = 47/101 (46%), Gaps = 1/101 (0%)

Query: 37  VAPGGKMIVESHSAVAPGGRMIVERHSAVAPGGKMIVESHSAVAPGGRMIVERHSVVALG 96
           V+P   ++   +S V+P   ++   H  V+    ++      V+P    +V  H  V+  
Sbjct: 3   VSPYCPVVSTHYSVVSPHCPLVPPHHPLVSLHHPLVSPHFPLVSPH-HPLVSLHHPVSPH 61

Query: 97  GRMIVKRHSAVAPGGKMIVERHSAVAPGGRMIVERHSVVAP 137
             ++   H  ++P   ++  ++S V+P   ++   +S+V+P
Sbjct: 62  FPLVSPHHPLMSPHYSLVSPQYSPVSPHCPLVSPHYSLVSP 102



 Score = 28.5 bits (62), Expect = 1.9
 Identities = 17/80 (21%), Positives = 37/80 (46%), Gaps = 6/80 (7%)

Query: 8   VVAPGGKMIVERHSAVAPGGKMI------VESHSAVAPGGKMIVESHSAVAPGGRMIVER 61
           +V P   ++   H  V+P   ++      V  H  V+P   ++   H  ++P   ++  +
Sbjct: 23  LVPPHHPLVSLHHPLVSPHFPLVSPHHPLVSLHHPVSPHFPLVSPHHPLMSPHYSLVSPQ 82

Query: 62  HSAVAPGGKMIVESHSAVAP 81
           +S V+P   ++   +S V+P
Sbjct: 83  YSPVSPHCPLVSPHYSLVSP 102



 Score = 26.2 bits (56), Expect = 9.3
 Identities = 12/51 (23%), Positives = 25/51 (49%)

Query: 3   VERHSVVAPGGKMIVERHSAVAPGGKMIVESHSAVAPGGKMIVESHSAVAP 53
           V  H  V+P   ++   H  ++P   ++   +S V+P   ++   +S V+P
Sbjct: 52  VSLHHPVSPHFPLVSPHHPLMSPHYSLVSPQYSPVSPHCPLVSPHYSLVSP 102


>gi|4503475 eukaryotic translation elongation factor 1 alpha 2 [Homo
           sapiens]
          Length = 463

 Score = 28.9 bits (63), Expect = 1.4
 Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 7/85 (8%)

Query: 41  GKMIVESHSAVAPGGRMIVERHSAVAPGGKMIVESHSAVAPGGRMIV-ERHSVVALGGRM 99
           GK + ++  ++  G   IVE    + PG  M VES S   P GR  V +    VA+G   
Sbjct: 384 GKKLEDNPKSLKSGDAAIVE----MVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVGVIK 439

Query: 100 IVKRHSAVAPGGKMIVERHSAVAPG 124
            V++ S  A  GK+      A   G
Sbjct: 440 NVEKKSGGA--GKVTKSAQKAQKAG 462



 Score = 27.7 bits (60), Expect = 3.2
 Identities = 24/69 (34%), Positives = 30/69 (43%), Gaps = 5/69 (7%)

Query: 13  GKMIVERHSAVAPGGKMIVESHSAVAPGGKMIVESHSAVAPGGRMIV-ERHSAVAPGGKM 71
           GK + +   ++  G   IVE    + PG  M VES S   P GR  V +    VA G   
Sbjct: 384 GKKLEDNPKSLKSGDAAIVE----MVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVGVIK 439

Query: 72  IVESHSAVA 80
            VE  S  A
Sbjct: 440 NVEKKSGGA 448


>gi|239750169 PREDICTED: hypothetical protein XP_002347312 [Homo
           sapiens]
          Length = 368

 Score = 28.1 bits (61), Expect = 2.5
 Identities = 23/105 (21%), Positives = 49/105 (46%), Gaps = 10/105 (9%)

Query: 8   VVAPGGKMIVER-----HSAVAPGGKMIVESHSAVAPGGKMIVESHSAVAPGGRMIVERH 62
           VV P   +I+++     H  V    ++ V +H A+    ++ + SH A      +I+ + 
Sbjct: 240 VVTPVVLLIIQQVAVVTHETVLITLRVTVVTHDAILTIHRVTLVSHEAT-----LIIHQV 294

Query: 63  SAVAPGGKMIVESHSAVAPGGRMIVERHSVVALGGRMIVKRHSAV 107
           + V     +I+   + V     +I++R +VV L   +I+ + + V
Sbjct: 295 TVVTHKEILIINQVTVVPHEATLIIQRVTVVTLEATLIIHQGTVV 339



 Score = 28.1 bits (61), Expect = 2.5
 Identities = 21/94 (22%), Positives = 45/94 (47%), Gaps = 5/94 (5%)

Query: 42  KMIVESHSAVAPGGRMIVERHSAVAPGGKMIVESHSAVAPGGRMIVERHSVVALGGRMIV 101
           ++ V +H  V    R+ V  H A+    ++ + SH A      +I+ + +VV     +I+
Sbjct: 251 QVAVVTHETVLITLRVTVVTHDAILTIHRVTLVSHEAT-----LIIHQVTVVTHKEILII 305

Query: 102 KRHSAVAPGGKMIVERHSAVAPGGRMIVERHSVV 135
            + + V     +I++R + V     +I+ + +VV
Sbjct: 306 NQVTVVPHEATLIIQRVTVVTLEATLIIHQGTVV 339



 Score = 26.9 bits (58), Expect = 5.5
 Identities = 22/107 (20%), Positives = 42/107 (39%)

Query: 1   MTVERHSVVAPGGKMIVERHSAVAPGGKMIVESHSAVAPGGKMIVESHSAVAPGGRMIVE 60
           +TV  H  +     + +  H A+    +  V +H A     ++ V +H       R+ + 
Sbjct: 42  ITVVTHEAILSINGLTMVTHEAILTIHQATVVTHEATRIIHQVTVVTHEVTFIFHRVRIV 101

Query: 61  RHSAVAPGGKMIVESHSAVAPGGRMIVERHSVVALGGRMIVKRHSAV 107
            H A      +I+ +  A     R+ V  H  + +  R+ V  H A+
Sbjct: 102 THDATLIIQWVILVTQEATLIINRVTVVTHEAILIIHRVTVVTHEAI 148


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.132    0.379 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,549,590
Number of Sequences: 37866
Number of extensions: 315196
Number of successful extensions: 688
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 570
Number of HSP's gapped (non-prelim): 52
length of query: 140
length of database: 18,247,518
effective HSP length: 92
effective length of query: 48
effective length of database: 14,763,846
effective search space: 708664608
effective search space used: 708664608
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.