Search of human proteins with 239745842

Search of human proteins with 239745842

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239745842 PREDICTED: hypothetical protein XP_002343603 [Homo
sapiens]
         (241 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239756851 PREDICTED: hypothetical protein [Homo sapiens]           497   e-141
gi|239751343 PREDICTED: hypothetical protein XP_002347813 [Homo ...   497   e-141
gi|239745842 PREDICTED: hypothetical protein XP_002343603 [Homo ...   497   e-141
gi|239751877 PREDICTED: hypothetical protein XP_002348035 [Homo ...    34   0.13 
gi|239755033 PREDICTED: hypothetical protein XP_002346199 [Homo ...    33   0.29 
gi|239749533 PREDICTED: hypothetical protein XP_002347079 [Homo ...    33   0.29 
gi|239743682 PREDICTED: hypothetical protein XP_002342945 [Homo ...    33   0.29 
gi|169172508 PREDICTED: hypothetical protein [Homo sapiens]            32   0.64 
gi|169173078 PREDICTED: hypothetical protein [Homo sapiens]            32   0.64 
gi|239755924 PREDICTED: hypothetical protein [Homo sapiens]            30   1.9  
gi|239750442 PREDICTED: hypothetical protein XP_002347364 [Homo ...    30   1.9  
gi|239744744 PREDICTED: hypothetical protein XP_002343250 [Homo ...    30   1.9  
gi|62988361 absent in melanoma 1 [Homo sapiens]                        30   1.9  
gi|125628665 hypothetical protein LOC388284 [Homo sapiens]             30   1.9  
gi|57864582 hornerin [Homo sapiens]                                    29   4.2  
gi|27477095 nuclear receptor binding SET domain protein 1 isofor...    29   4.2  
gi|19923586 nuclear receptor binding SET domain protein 1 isofor...    29   4.2  
gi|188219577 ring finger protein 19B isoform a [Homo sapiens]          29   4.2  
gi|188219579 ring finger protein 19B isoform b [Homo sapiens]          29   4.2  
gi|29826279 tubby isoform b [Homo sapiens]                             28   5.5  
gi|19923167 tubby isoform a [Homo sapiens]                             28   5.5  
gi|226423929 zinc finger, imprinted 2 [Homo sapiens]                   28   5.5  
gi|226423927 zinc finger, imprinted 2 [Homo sapiens]                   28   5.5  
gi|33354273 zinc finger, imprinted 2 [Homo sapiens]                    28   5.5  
gi|239754195 PREDICTED: hypothetical protein [Homo sapiens]            28   7.1  
gi|169167066 PREDICTED: hypothetical protein [Homo sapiens]            28   7.1  
gi|239748723 PREDICTED: hypothetical protein XP_002346783 [Homo ...    28   7.1  
gi|113416187 PREDICTED: hypothetical protein [Homo sapiens]            28   7.1  
gi|239742758 PREDICTED: hypothetical protein XP_002342618 [Homo ...    28   7.1  
gi|113415691 PREDICTED: hypothetical protein [Homo sapiens]            28   7.1  

>gi|239756851 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 241

 Score =  497 bits (1279), Expect = e-141
 Identities = 241/241 (100%), Positives = 241/241 (100%)

Query: 1   MTAEEWWGRRLSTSTMSRICCRSFVLTHSALHTRSRSAGRFTLLRTWPHLMTAVAQAACV 60
           MTAEEWWGRRLSTSTMSRICCRSFVLTHSALHTRSRSAGRFTLLRTWPHLMTAVAQAACV
Sbjct: 1   MTAEEWWGRRLSTSTMSRICCRSFVLTHSALHTRSRSAGRFTLLRTWPHLMTAVAQAACV 60

Query: 61  IEEDDFGGPQRLGQRRGHLQGVEKHGAARGRLPDGAQDGDAARLQAPLQQVCLHRDDAAV 120
           IEEDDFGGPQRLGQRRGHLQGVEKHGAARGRLPDGAQDGDAARLQAPLQQVCLHRDDAAV
Sbjct: 61  IEEDDFGGPQRLGQRRGHLQGVEKHGAARGRLPDGAQDGDAARLQAPLQQVCLHRDDAAV 120

Query: 121 AVGQTCSGGVVSKRVYQHLAALGQLRLGLPEGKTARGSRRGRQPQDHQRLHVHALQEGQG 180
           AVGQTCSGGVVSKRVYQHLAALGQLRLGLPEGKTARGSRRGRQPQDHQRLHVHALQEGQG
Sbjct: 121 AVGQTCSGGVVSKRVYQHLAALGQLRLGLPEGKTARGSRRGRQPQDHQRLHVHALQEGQG 180

Query: 181 KGQTGYALLALEHLLVHLRRKPAAYPAMPEDRWPHNPIPSLRHGPRRAPLTSMTAKGLSA 240
           KGQTGYALLALEHLLVHLRRKPAAYPAMPEDRWPHNPIPSLRHGPRRAPLTSMTAKGLSA
Sbjct: 181 KGQTGYALLALEHLLVHLRRKPAAYPAMPEDRWPHNPIPSLRHGPRRAPLTSMTAKGLSA 240

Query: 241 E 241
           E
Sbjct: 241 E 241


>gi|239751343 PREDICTED: hypothetical protein XP_002347813 [Homo
           sapiens]
          Length = 241

 Score =  497 bits (1279), Expect = e-141
 Identities = 241/241 (100%), Positives = 241/241 (100%)

Query: 1   MTAEEWWGRRLSTSTMSRICCRSFVLTHSALHTRSRSAGRFTLLRTWPHLMTAVAQAACV 60
           MTAEEWWGRRLSTSTMSRICCRSFVLTHSALHTRSRSAGRFTLLRTWPHLMTAVAQAACV
Sbjct: 1   MTAEEWWGRRLSTSTMSRICCRSFVLTHSALHTRSRSAGRFTLLRTWPHLMTAVAQAACV 60

Query: 61  IEEDDFGGPQRLGQRRGHLQGVEKHGAARGRLPDGAQDGDAARLQAPLQQVCLHRDDAAV 120
           IEEDDFGGPQRLGQRRGHLQGVEKHGAARGRLPDGAQDGDAARLQAPLQQVCLHRDDAAV
Sbjct: 61  IEEDDFGGPQRLGQRRGHLQGVEKHGAARGRLPDGAQDGDAARLQAPLQQVCLHRDDAAV 120

Query: 121 AVGQTCSGGVVSKRVYQHLAALGQLRLGLPEGKTARGSRRGRQPQDHQRLHVHALQEGQG 180
           AVGQTCSGGVVSKRVYQHLAALGQLRLGLPEGKTARGSRRGRQPQDHQRLHVHALQEGQG
Sbjct: 121 AVGQTCSGGVVSKRVYQHLAALGQLRLGLPEGKTARGSRRGRQPQDHQRLHVHALQEGQG 180

Query: 181 KGQTGYALLALEHLLVHLRRKPAAYPAMPEDRWPHNPIPSLRHGPRRAPLTSMTAKGLSA 240
           KGQTGYALLALEHLLVHLRRKPAAYPAMPEDRWPHNPIPSLRHGPRRAPLTSMTAKGLSA
Sbjct: 181 KGQTGYALLALEHLLVHLRRKPAAYPAMPEDRWPHNPIPSLRHGPRRAPLTSMTAKGLSA 240

Query: 241 E 241
           E
Sbjct: 241 E 241


>gi|239745842 PREDICTED: hypothetical protein XP_002343603 [Homo
           sapiens]
          Length = 241

 Score =  497 bits (1279), Expect = e-141
 Identities = 241/241 (100%), Positives = 241/241 (100%)

Query: 1   MTAEEWWGRRLSTSTMSRICCRSFVLTHSALHTRSRSAGRFTLLRTWPHLMTAVAQAACV 60
           MTAEEWWGRRLSTSTMSRICCRSFVLTHSALHTRSRSAGRFTLLRTWPHLMTAVAQAACV
Sbjct: 1   MTAEEWWGRRLSTSTMSRICCRSFVLTHSALHTRSRSAGRFTLLRTWPHLMTAVAQAACV 60

Query: 61  IEEDDFGGPQRLGQRRGHLQGVEKHGAARGRLPDGAQDGDAARLQAPLQQVCLHRDDAAV 120
           IEEDDFGGPQRLGQRRGHLQGVEKHGAARGRLPDGAQDGDAARLQAPLQQVCLHRDDAAV
Sbjct: 61  IEEDDFGGPQRLGQRRGHLQGVEKHGAARGRLPDGAQDGDAARLQAPLQQVCLHRDDAAV 120

Query: 121 AVGQTCSGGVVSKRVYQHLAALGQLRLGLPEGKTARGSRRGRQPQDHQRLHVHALQEGQG 180
           AVGQTCSGGVVSKRVYQHLAALGQLRLGLPEGKTARGSRRGRQPQDHQRLHVHALQEGQG
Sbjct: 121 AVGQTCSGGVVSKRVYQHLAALGQLRLGLPEGKTARGSRRGRQPQDHQRLHVHALQEGQG 180

Query: 181 KGQTGYALLALEHLLVHLRRKPAAYPAMPEDRWPHNPIPSLRHGPRRAPLTSMTAKGLSA 240
           KGQTGYALLALEHLLVHLRRKPAAYPAMPEDRWPHNPIPSLRHGPRRAPLTSMTAKGLSA
Sbjct: 181 KGQTGYALLALEHLLVHLRRKPAAYPAMPEDRWPHNPIPSLRHGPRRAPLTSMTAKGLSA 240

Query: 241 E 241
           E
Sbjct: 241 E 241


>gi|239751877 PREDICTED: hypothetical protein XP_002348035 [Homo
           sapiens]
          Length = 944

 Score = 33.9 bits (76), Expect = 0.13
 Identities = 37/122 (30%), Positives = 47/122 (38%), Gaps = 19/122 (15%)

Query: 85  HGAARGRLPDGAQDGDAARLQAPLQQVCLHRDDAAV--------AVGQTCSGGVVSKRVY 136
           HG  RGR   G + G A  L+ PLQ    H D A +          G    GG V   V 
Sbjct: 695 HGRGRGRR--GGRRGRAVGLEVPLQVGVAHEDLAGLPGLGGRGRGGGTRGGGGAVRALVQ 752

Query: 137 QHLAALGQLRLGLPEGKTARGSRRGRQPQDHQRL--HVHALQEGQGKGQTGYALLALEHL 194
           Q +  +G       EG  A  +  G   + H  +   V AL+E      TG   LA  H+
Sbjct: 753 QQVGGVG-------EGLGAERAAEGPLARVHALVLPQVGALREALPADSTGVGPLAGVHV 805

Query: 195 LV 196
            V
Sbjct: 806 AV 807


>gi|239755033 PREDICTED: hypothetical protein XP_002346199 [Homo
           sapiens]
          Length = 537

 Score = 32.7 bits (73), Expect = 0.29
 Identities = 30/99 (30%), Positives = 41/99 (41%), Gaps = 11/99 (11%)

Query: 72  LGQRRGHLQGVEKHGAARGRLPD---GAQDGDAARLQAPLQQVCLHRDDAAVAVGQTCSG 128
           LGQ+ G L G        G +PD       G+ A L   LQ       DA++A+G     
Sbjct: 235 LGQQHGMLLGNHMQLPLEGVVPDLLHVVPVGNDAMLDEALQG-----QDASLALGLVAHM 289

Query: 129 GVVSKRVYQHLAALGQLRLGLPEGKTARGSRRGRQPQDH 167
           GV+    + H   LG   +   EG+  RGS    +P  H
Sbjct: 290 GVLPTHAHHHALVLG---VPHDEGEDGRGSSSPAKPAFH 325


>gi|239749533 PREDICTED: hypothetical protein XP_002347079 [Homo
           sapiens]
          Length = 537

 Score = 32.7 bits (73), Expect = 0.29
 Identities = 30/99 (30%), Positives = 41/99 (41%), Gaps = 11/99 (11%)

Query: 72  LGQRRGHLQGVEKHGAARGRLPD---GAQDGDAARLQAPLQQVCLHRDDAAVAVGQTCSG 128
           LGQ+ G L G        G +PD       G+ A L   LQ       DA++A+G     
Sbjct: 235 LGQQHGMLLGNHMQLPLEGVVPDLLHVVPVGNDAMLDEALQG-----QDASLALGLVAHM 289

Query: 129 GVVSKRVYQHLAALGQLRLGLPEGKTARGSRRGRQPQDH 167
           GV+    + H   LG   +   EG+  RGS    +P  H
Sbjct: 290 GVLPTHAHHHALVLG---VPHDEGEDGRGSSSPAKPAFH 325


>gi|239743682 PREDICTED: hypothetical protein XP_002342945 [Homo
           sapiens]
          Length = 537

 Score = 32.7 bits (73), Expect = 0.29
 Identities = 30/99 (30%), Positives = 41/99 (41%), Gaps = 11/99 (11%)

Query: 72  LGQRRGHLQGVEKHGAARGRLPD---GAQDGDAARLQAPLQQVCLHRDDAAVAVGQTCSG 128
           LGQ+ G L G        G +PD       G+ A L   LQ       DA++A+G     
Sbjct: 235 LGQQHGMLLGNHMQLPLEGVVPDLLHVVPVGNDAMLDEALQG-----QDASLALGLVAHM 289

Query: 129 GVVSKRVYQHLAALGQLRLGLPEGKTARGSRRGRQPQDH 167
           GV+    + H   LG   +   EG+  RGS    +P  H
Sbjct: 290 GVLPTHAHHHALVLG---VPHDEGEDGRGSSSPAKPAFH 325


>gi|169172508 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 402

 Score = 31.6 bits (70), Expect = 0.64
 Identities = 33/130 (25%), Positives = 51/130 (39%), Gaps = 26/130 (20%)

Query: 55  AQAACVIEED---------DFGGPQRLGQRRGHLQGVEKHGAARGRLPDGAQDGDAARLQ 105
           +Q+A + +ED          F  P     +  H++G  + G+ R   P   +   ++   
Sbjct: 125 SQSADISQEDRKPAKRRPTHFYHPDEHKAQPSHVRGSRRPGSPRSASPGVGRSWASSWAG 184

Query: 106 APLQQVCLH------RDDAAVAVGQTCSGGVVSKRVYQHLAALGQLRLGLPEGKTARGSR 159
            P Q + L         DA +A+G     G       + LA    L L +PEG    G R
Sbjct: 185 VPRQPLALDLRPTWKAPDARLALGSARGPG-------RRLA----LHLQVPEGARQLGPR 233

Query: 160 RGRQPQDHQR 169
            G QP  H+R
Sbjct: 234 TGAQPSRHRR 243


>gi|169173078 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 402

 Score = 31.6 bits (70), Expect = 0.64
 Identities = 33/130 (25%), Positives = 51/130 (39%), Gaps = 26/130 (20%)

Query: 55  AQAACVIEED---------DFGGPQRLGQRRGHLQGVEKHGAARGRLPDGAQDGDAARLQ 105
           +Q+A + +ED          F  P     +  H++G  + G+ R   P   +   ++   
Sbjct: 125 SQSADISQEDRKPAKRRPTHFYHPDEHKAQPSHVRGSRRPGSPRSASPGVGRSWASSWAG 184

Query: 106 APLQQVCLH------RDDAAVAVGQTCSGGVVSKRVYQHLAALGQLRLGLPEGKTARGSR 159
            P Q + L         DA +A+G     G       + LA    L L +PEG    G R
Sbjct: 185 VPRQPLALDLRPTWKAPDARLALGSARGPG-------RRLA----LHLQVPEGARQLGPR 233

Query: 160 RGRQPQDHQR 169
            G QP  H+R
Sbjct: 234 TGAQPSRHRR 243


>gi|239755924 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 102

 Score = 30.0 bits (66), Expect = 1.9
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 199 RRKPAAYPAMP--EDRWPHNPIPSLRHGPRRAP 229
           RR P++    P  EDR P  P+P LR  P  AP
Sbjct: 22  RRLPSSVRGSPQLEDRQPRRPLPRLRRAPPPAP 54


>gi|239750442 PREDICTED: hypothetical protein XP_002347364 [Homo
           sapiens]
          Length = 102

 Score = 30.0 bits (66), Expect = 1.9
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 199 RRKPAAYPAMP--EDRWPHNPIPSLRHGPRRAP 229
           RR P++    P  EDR P  P+P LR  P  AP
Sbjct: 22  RRLPSSVRGSPQLEDRQPRRPLPRLRRAPPPAP 54


>gi|239744744 PREDICTED: hypothetical protein XP_002343250 [Homo
           sapiens]
          Length = 102

 Score = 30.0 bits (66), Expect = 1.9
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 199 RRKPAAYPAMP--EDRWPHNPIPSLRHGPRRAP 229
           RR P++    P  EDR P  P+P LR  P  AP
Sbjct: 22  RRLPSSVRGSPQLEDRQPRRPLPRLRRAPPPAP 54


>gi|62988361 absent in melanoma 1 [Homo sapiens]
          Length = 1723

 Score = 30.0 bits (66), Expect = 1.9
 Identities = 44/177 (24%), Positives = 63/177 (35%), Gaps = 39/177 (22%)

Query: 70  QRLGQRRGHLQGVEKHGAARGRLPDGAQDGDAARLQAPLQQVCLHRDDAAVAVGQTCSGG 129
           +R G+RRG  +  +  GA    LP+ A   DA               D  VA        
Sbjct: 8   RRSGRRRGSQKSTDSPGAD-AELPESAARDDAVF-------------DDEVAPNAASDNA 53

Query: 130 VVSKRVYQHLAAL--GQLRLGLPEGKTARGSR---RGRQPQDHQRLHVHALQEGQGKGQT 184
              K+V    AAL  G      PE K + G++   RG   +  Q     +  + +G+ + 
Sbjct: 54  SAEKKVKSPRAALDGGVASAASPESKPSPGTKGQLRGESDRSKQPPPASSPTKRKGRSRA 113

Query: 185 GYALLALEHLLVHLRRKPAAYPAMPEDRWPHNPIPSLRHGPRRAPLTSMTAKGLSAE 241
             A+ A           PA+ P  P    P          P+R P  S   KG +AE
Sbjct: 114 LEAVPA----------PPASGPRAPAKESP----------PKRVPDPSPVTKGTAAE 150


>gi|125628665 hypothetical protein LOC388284 [Homo sapiens]
          Length = 317

 Score = 30.0 bits (66), Expect = 1.9
 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 4/43 (9%)

Query: 201 KPAAYPAMPEDRWPHNPIPSL---RHGPRRAPLTSMTAKGLSA 240
           +P  +    E+R P  P+ S+   RHGP+R P+ S++  GL A
Sbjct: 79  RPKPHAGALEERGPR-PVVSIVRPRHGPKRKPVKSLSLPGLRA 120


>gi|57864582 hornerin [Homo sapiens]
          Length = 2850

 Score = 28.9 bits (63), Expect = 4.2
 Identities = 28/114 (24%), Positives = 40/114 (35%), Gaps = 7/114 (6%)

Query: 77   GHLQGVEKHGAARGRLPDGAQDGDAARLQAPLQQVCLHRDDAAVAVGQTCSGGVVSKRVY 136
            GH     +HG+  G      Q G  +   +   Q       ++ + G   SG   S    
Sbjct: 2702 GHSSAYSQHGSGSGHFCSQGQHGSTSGQSSTFDQEGSSTGQSS-SYGHRGSGSSQSSGYG 2760

Query: 137  QHLAALGQLRLGLPEGKTARGSRRGRQPQDHQRLHVHAL---QEGQGKGQTGYA 187
            +H A  GQ    L  G+   GS +      H      +    Q G G GQ GY+
Sbjct: 2761 RHGAGSGQ---SLSHGRHGSGSGQSSSYGQHGSGSGQSSGYSQHGSGSGQDGYS 2811



 Score = 27.7 bits (60), Expect = 9.3
 Identities = 28/123 (22%), Positives = 49/123 (39%), Gaps = 8/123 (6%)

Query: 73   GQRRGHLQGVEKHGAARGRLPDGAQDGDAARLQAPLQQVCLHRDDA--AVAVGQTCSGGV 130
            G   GH  G  +HG+  G+   G + G ++R  +   Q   H   +  +   G+  SG  
Sbjct: 1654 GSGSGHSSGYGQHGSRSGQSSRGERHGSSSRSSSRYGQ---HGSGSRQSSGHGRQGSGSG 1710

Query: 131  VSKRVYQHLAALGQLRLGLPEGKTARGSRRGRQPQDHQRLHVHALQEGQGKGQTGYALLA 190
             S    +H + LG        G+   GS R      ++    H+   GQ +  +G++   
Sbjct: 1711 QSPSRGRHGSGLGH---SSSHGQHGSGSGRSSSRGPYESRSGHSSVFGQHESGSGHSSAY 1767

Query: 191  LEH 193
             +H
Sbjct: 1768 SQH 1770


>gi|27477095 nuclear receptor binding SET domain protein 1 isoform a
           [Homo sapiens]
          Length = 2427

 Score = 28.9 bits (63), Expect = 4.2
 Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 12/107 (11%)

Query: 69  PQRLGQRRGHLQGVEKHGAARGRLPDGAQ----DGDAARLQA--PLQQVCLHRDDAAVAV 122
           P+R   ++GH+Q        RG++P+        GD +  QA   L ++      +  A 
Sbjct: 237 PKRTSVKKGHIQFEAHKDERRGKIPENLGLNFISGDISDTQASNELSRIANSLTGSNTAP 296

Query: 123 GQ---TCSGGVVSKRVYQHLAALGQLRLGLPEGK-TARGSRRGRQPQ 165
           G    +  G   +K+ ++   + G   LGLPEG   ++ SR   +PQ
Sbjct: 297 GSFLFSSCGKNTAKKEFE--TSNGDSLLGLPEGALISKCSREKNKPQ 341


>gi|19923586 nuclear receptor binding SET domain protein 1 isoform b
           [Homo sapiens]
          Length = 2696

 Score = 28.9 bits (63), Expect = 4.2
 Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 12/107 (11%)

Query: 69  PQRLGQRRGHLQGVEKHGAARGRLPDGAQ----DGDAARLQA--PLQQVCLHRDDAAVAV 122
           P+R   ++GH+Q        RG++P+        GD +  QA   L ++      +  A 
Sbjct: 506 PKRTSVKKGHIQFEAHKDERRGKIPENLGLNFISGDISDTQASNELSRIANSLTGSNTAP 565

Query: 123 GQ---TCSGGVVSKRVYQHLAALGQLRLGLPEGK-TARGSRRGRQPQ 165
           G    +  G   +K+ ++   + G   LGLPEG   ++ SR   +PQ
Sbjct: 566 GSFLFSSCGKNTAKKEFE--TSNGDSLLGLPEGALISKCSREKNKPQ 610


>gi|188219577 ring finger protein 19B isoform a [Homo sapiens]
          Length = 732

 Score = 28.9 bits (63), Expect = 4.2
 Identities = 25/97 (25%), Positives = 35/97 (36%), Gaps = 20/97 (20%)

Query: 145 LRLGLPEGKTARGSRRGRQPQDHQRLHVHALQEGQGKGQTGYALLALEHLLVHLRRKPAA 204
           L    P+ K   G RR       +RL +H++     +G+               R KP A
Sbjct: 15  LHAAAPDPKCRSGGRR-------RRLTLHSVFSASARGRRA-------------RAKPQA 54

Query: 205 YPAMPEDRWPHNPIPSLRHGPRRAPLTSMTAKGLSAE 241
            P  P  + P  P P+   GP    L +  A    AE
Sbjct: 55  EPPPPAAQPPPAPAPAAAQGPPPEALPAEPAAEAEAE 91


>gi|188219579 ring finger protein 19B isoform b [Homo sapiens]
          Length = 587

 Score = 28.9 bits (63), Expect = 4.2
 Identities = 25/97 (25%), Positives = 35/97 (36%), Gaps = 20/97 (20%)

Query: 145 LRLGLPEGKTARGSRRGRQPQDHQRLHVHALQEGQGKGQTGYALLALEHLLVHLRRKPAA 204
           L    P+ K   G RR       +RL +H++     +G+               R KP A
Sbjct: 15  LHAAAPDPKCRSGGRR-------RRLTLHSVFSASARGRRA-------------RAKPQA 54

Query: 205 YPAMPEDRWPHNPIPSLRHGPRRAPLTSMTAKGLSAE 241
            P  P  + P  P P+   GP    L +  A    AE
Sbjct: 55  EPPPPAAQPPPAPAPAAAQGPPPEALPAEPAAEAEAE 91


>gi|29826279 tubby isoform b [Homo sapiens]
          Length = 506

 Score = 28.5 bits (62), Expect = 5.5
 Identities = 15/47 (31%), Positives = 23/47 (48%)

Query: 83  EKHGAARGRLPDGAQDGDAARLQAPLQQVCLHRDDAAVAVGQTCSGG 129
           EK G  +G     A   D +  Q P+Q + + + D A   G+T +GG
Sbjct: 126 EKKGKHKGTSGPAALAEDKSEAQGPVQILTVGQSDHAQDAGETAAGG 172


>gi|19923167 tubby isoform a [Homo sapiens]
          Length = 561

 Score = 28.5 bits (62), Expect = 5.5
 Identities = 15/47 (31%), Positives = 23/47 (48%)

Query: 83  EKHGAARGRLPDGAQDGDAARLQAPLQQVCLHRDDAAVAVGQTCSGG 129
           EK G  +G     A   D +  Q P+Q + + + D A   G+T +GG
Sbjct: 181 EKKGKHKGTSGPAALAEDKSEAQGPVQILTVGQSDHAQDAGETAAGG 227


>gi|226423929 zinc finger, imprinted 2 [Homo sapiens]
          Length = 527

 Score = 28.5 bits (62), Expect = 5.5
 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 5/58 (8%)

Query: 152 GKTARGSRRGRQPQDH-----QRLHVHALQEGQGKGQTGYALLALEHLLVHLRRKPAA 204
           G+   G   GR+P        +R+ +H+ ++     Q G A L   HLL HL+   AA
Sbjct: 380 GRKTSGCNEGRKPSVQCANLCERVRIHSQEDYFECFQCGKAFLQNVHLLQHLKAHEAA 437


>gi|226423927 zinc finger, imprinted 2 [Homo sapiens]
          Length = 527

 Score = 28.5 bits (62), Expect = 5.5
 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 5/58 (8%)

Query: 152 GKTARGSRRGRQPQDH-----QRLHVHALQEGQGKGQTGYALLALEHLLVHLRRKPAA 204
           G+   G   GR+P        +R+ +H+ ++     Q G A L   HLL HL+   AA
Sbjct: 380 GRKTSGCNEGRKPSVQCANLCERVRIHSQEDYFECFQCGKAFLQNVHLLQHLKAHEAA 437


>gi|33354273 zinc finger, imprinted 2 [Homo sapiens]
          Length = 527

 Score = 28.5 bits (62), Expect = 5.5
 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 5/58 (8%)

Query: 152 GKTARGSRRGRQPQDH-----QRLHVHALQEGQGKGQTGYALLALEHLLVHLRRKPAA 204
           G+   G   GR+P        +R+ +H+ ++     Q G A L   HLL HL+   AA
Sbjct: 380 GRKTSGCNEGRKPSVQCANLCERVRIHSQEDYFECFQCGKAFLQNVHLLQHLKAHEAA 437


>gi|239754195 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 631

 Score = 28.1 bits (61), Expect = 7.1
 Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)

Query: 67  GGPQRLGQRRGHLQGV-EKHGAARGRLPD 94
           GGP+ L + RGHLQ +   HG    +LP+
Sbjct: 446 GGPKVLEEVRGHLQVILHHHGRGEAKLPE 474


>gi|169167066 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 262

 Score = 28.1 bits (61), Expect = 7.1
 Identities = 16/48 (33%), Positives = 19/48 (39%)

Query: 66  FGGPQRLGQRRGHLQGVEKHGAARGRLPDGAQDGDAARLQAPLQQVCL 113
           F G  RLGQ  G      +  A     P  ++ G      APL Q CL
Sbjct: 137 FAGRPRLGQESGQGVAARRRRALPRHPPLASERGPRTHTPAPLWQACL 184


>gi|239748723 PREDICTED: hypothetical protein XP_002346783 [Homo
           sapiens]
          Length = 541

 Score = 28.1 bits (61), Expect = 7.1
 Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)

Query: 67  GGPQRLGQRRGHLQGV-EKHGAARGRLPD 94
           GGP+ L + RGHLQ +   HG    +LP+
Sbjct: 356 GGPKVLEEVRGHLQVILHHHGRGEAKLPE 384


>gi|113416187 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 262

 Score = 28.1 bits (61), Expect = 7.1
 Identities = 16/48 (33%), Positives = 19/48 (39%)

Query: 66  FGGPQRLGQRRGHLQGVEKHGAARGRLPDGAQDGDAARLQAPLQQVCL 113
           F G  RLGQ  G      +  A     P  ++ G      APL Q CL
Sbjct: 137 FAGRPRLGQESGQGVAARRRRALPRHPPLASERGPRTHTPAPLWQACL 184


>gi|239742758 PREDICTED: hypothetical protein XP_002342618 [Homo
           sapiens]
          Length = 631

 Score = 28.1 bits (61), Expect = 7.1
 Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)

Query: 67  GGPQRLGQRRGHLQGV-EKHGAARGRLPD 94
           GGP+ L + RGHLQ +   HG    +LP+
Sbjct: 446 GGPKVLEEVRGHLQVILHHHGRGEAKLPE 474


>gi|113415691 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 262

 Score = 28.1 bits (61), Expect = 7.1
 Identities = 16/48 (33%), Positives = 19/48 (39%)

Query: 66  FGGPQRLGQRRGHLQGVEKHGAARGRLPDGAQDGDAARLQAPLQQVCL 113
           F G  RLGQ  G      +  A     P  ++ G      APL Q CL
Sbjct: 137 FAGRPRLGQESGQGVAARRRRALPRHPPLASERGPRTHTPAPLWQACL 184


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.134    0.419 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,125,059
Number of Sequences: 37866
Number of extensions: 497422
Number of successful extensions: 1332
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 1287
Number of HSP's gapped (non-prelim): 69
length of query: 241
length of database: 18,247,518
effective HSP length: 99
effective length of query: 142
effective length of database: 14,498,784
effective search space: 2058827328
effective search space used: 2058827328
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.