Guide to the Human Genome
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Search of human proteins with 239745119

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239745119 PREDICTED: hypothetical protein XP_002343397 [Homo
sapiens]
         (175 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239750790 PREDICTED: hypothetical protein XP_002347558 [Homo ...   375   e-105
gi|239745150 PREDICTED: hypothetical protein XP_002343411 [Homo ...   375   e-105
gi|239745134 PREDICTED: hypothetical protein XP_002343399 [Homo ...   375   e-105
gi|239745119 PREDICTED: hypothetical protein XP_002343397 [Homo ...   375   e-105
gi|239745116 PREDICTED: hypothetical protein XP_002343387 [Homo ...   375   e-105
gi|239756247 PREDICTED: hypothetical protein [Homo sapiens]           361   e-100
gi|4505195 mitogen-activated protein kinase kinase kinase 11 [Ho...    42   3e-04
gi|38201702 telomerase reverse transcriptase isoform 2 [Homo sap...    39   0.002
gi|109633031 telomerase reverse transcriptase isoform 1 [Homo sa...    39   0.002
gi|169216359 PREDICTED: hypothetical protein [Homo sapiens]            37   0.009
gi|169216600 PREDICTED: hypothetical protein [Homo sapiens]            37   0.009
gi|190343021 Sec24-related protein D [Homo sapiens]                    37   0.009
gi|21237805 SWI/SNF-related matrix-associated actin-dependent re...    37   0.009
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    36   0.015
gi|153791535 general control of amino acid synthesis 5-like 2 [H...    36   0.019
gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens]                36   0.019
gi|150170729 microtubule associated serine/threonine kinase 3 [H...    35   0.025
gi|18959210 WIRE protein [Homo sapiens]                                35   0.025
gi|68563515 keratinocyte proline-rich protein [Homo sapiens]           35   0.025
gi|148237270 hypermethylated in cancer 1 isoform 2 [Homo sapiens]      35   0.033
gi|61676186 hypermethylated in cancer 1 isoform 1 [Homo sapiens]       35   0.033
gi|151108509 Rho GTPase-activating protein RICH2 [Homo sapiens]        35   0.033
gi|115430245 arylhydrocarbon receptor repressor [Homo sapiens]         35   0.043
gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]         35   0.043
gi|24497589 aristaless related homeobox [Homo sapiens]                 35   0.043
gi|208022661 hypothetical protein LOC57701 [Homo sapiens]              34   0.057
gi|187937179 apoptosis-associated tyrosine kinase [Homo sapiens]       34   0.074
gi|163965366 nascent polypeptide-associated complex alpha subuni...    34   0.074
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo...    33   0.097
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ...    33   0.097

>gi|239750790 PREDICTED: hypothetical protein XP_002347558 [Homo
           sapiens]
          Length = 175

 Score =  375 bits (964), Expect = e-105
 Identities = 175/175 (100%), Positives = 175/175 (100%)

Query: 1   MTRPLPESIRLLRHTGLVPPTPVPLGYPHQSFVSQPHPFSKQPSPCPRQSPQGDFGWVSP 60
           MTRPLPESIRLLRHTGLVPPTPVPLGYPHQSFVSQPHPFSKQPSPCPRQSPQGDFGWVSP
Sbjct: 1   MTRPLPESIRLLRHTGLVPPTPVPLGYPHQSFVSQPHPFSKQPSPCPRQSPQGDFGWVSP 60

Query: 61  GASRSITGPSSPAAPSLISLGSLGSHLQGARPHPRQSSLGDFGLVTPGTPCCRLCPPLLL 120
           GASRSITGPSSPAAPSLISLGSLGSHLQGARPHPRQSSLGDFGLVTPGTPCCRLCPPLLL
Sbjct: 61  GASRSITGPSSPAAPSLISLGSLGSHLQGARPHPRQSSLGDFGLVTPGTPCCRLCPPLLL 120

Query: 121 PQGRPPWVLCAGVSKELGPNPVLPSPIVEQRLGHGADMVPPPDQEEWNVVMSQST 175
           PQGRPPWVLCAGVSKELGPNPVLPSPIVEQRLGHGADMVPPPDQEEWNVVMSQST
Sbjct: 121 PQGRPPWVLCAGVSKELGPNPVLPSPIVEQRLGHGADMVPPPDQEEWNVVMSQST 175


>gi|239745150 PREDICTED: hypothetical protein XP_002343411 [Homo
           sapiens]
          Length = 175

 Score =  375 bits (964), Expect = e-105
 Identities = 175/175 (100%), Positives = 175/175 (100%)

Query: 1   MTRPLPESIRLLRHTGLVPPTPVPLGYPHQSFVSQPHPFSKQPSPCPRQSPQGDFGWVSP 60
           MTRPLPESIRLLRHTGLVPPTPVPLGYPHQSFVSQPHPFSKQPSPCPRQSPQGDFGWVSP
Sbjct: 1   MTRPLPESIRLLRHTGLVPPTPVPLGYPHQSFVSQPHPFSKQPSPCPRQSPQGDFGWVSP 60

Query: 61  GASRSITGPSSPAAPSLISLGSLGSHLQGARPHPRQSSLGDFGLVTPGTPCCRLCPPLLL 120
           GASRSITGPSSPAAPSLISLGSLGSHLQGARPHPRQSSLGDFGLVTPGTPCCRLCPPLLL
Sbjct: 61  GASRSITGPSSPAAPSLISLGSLGSHLQGARPHPRQSSLGDFGLVTPGTPCCRLCPPLLL 120

Query: 121 PQGRPPWVLCAGVSKELGPNPVLPSPIVEQRLGHGADMVPPPDQEEWNVVMSQST 175
           PQGRPPWVLCAGVSKELGPNPVLPSPIVEQRLGHGADMVPPPDQEEWNVVMSQST
Sbjct: 121 PQGRPPWVLCAGVSKELGPNPVLPSPIVEQRLGHGADMVPPPDQEEWNVVMSQST 175


>gi|239745134 PREDICTED: hypothetical protein XP_002343399 [Homo
           sapiens]
          Length = 175

 Score =  375 bits (964), Expect = e-105
 Identities = 175/175 (100%), Positives = 175/175 (100%)

Query: 1   MTRPLPESIRLLRHTGLVPPTPVPLGYPHQSFVSQPHPFSKQPSPCPRQSPQGDFGWVSP 60
           MTRPLPESIRLLRHTGLVPPTPVPLGYPHQSFVSQPHPFSKQPSPCPRQSPQGDFGWVSP
Sbjct: 1   MTRPLPESIRLLRHTGLVPPTPVPLGYPHQSFVSQPHPFSKQPSPCPRQSPQGDFGWVSP 60

Query: 61  GASRSITGPSSPAAPSLISLGSLGSHLQGARPHPRQSSLGDFGLVTPGTPCCRLCPPLLL 120
           GASRSITGPSSPAAPSLISLGSLGSHLQGARPHPRQSSLGDFGLVTPGTPCCRLCPPLLL
Sbjct: 61  GASRSITGPSSPAAPSLISLGSLGSHLQGARPHPRQSSLGDFGLVTPGTPCCRLCPPLLL 120

Query: 121 PQGRPPWVLCAGVSKELGPNPVLPSPIVEQRLGHGADMVPPPDQEEWNVVMSQST 175
           PQGRPPWVLCAGVSKELGPNPVLPSPIVEQRLGHGADMVPPPDQEEWNVVMSQST
Sbjct: 121 PQGRPPWVLCAGVSKELGPNPVLPSPIVEQRLGHGADMVPPPDQEEWNVVMSQST 175


>gi|239745119 PREDICTED: hypothetical protein XP_002343397 [Homo
           sapiens]
          Length = 175

 Score =  375 bits (964), Expect = e-105
 Identities = 175/175 (100%), Positives = 175/175 (100%)

Query: 1   MTRPLPESIRLLRHTGLVPPTPVPLGYPHQSFVSQPHPFSKQPSPCPRQSPQGDFGWVSP 60
           MTRPLPESIRLLRHTGLVPPTPVPLGYPHQSFVSQPHPFSKQPSPCPRQSPQGDFGWVSP
Sbjct: 1   MTRPLPESIRLLRHTGLVPPTPVPLGYPHQSFVSQPHPFSKQPSPCPRQSPQGDFGWVSP 60

Query: 61  GASRSITGPSSPAAPSLISLGSLGSHLQGARPHPRQSSLGDFGLVTPGTPCCRLCPPLLL 120
           GASRSITGPSSPAAPSLISLGSLGSHLQGARPHPRQSSLGDFGLVTPGTPCCRLCPPLLL
Sbjct: 61  GASRSITGPSSPAAPSLISLGSLGSHLQGARPHPRQSSLGDFGLVTPGTPCCRLCPPLLL 120

Query: 121 PQGRPPWVLCAGVSKELGPNPVLPSPIVEQRLGHGADMVPPPDQEEWNVVMSQST 175
           PQGRPPWVLCAGVSKELGPNPVLPSPIVEQRLGHGADMVPPPDQEEWNVVMSQST
Sbjct: 121 PQGRPPWVLCAGVSKELGPNPVLPSPIVEQRLGHGADMVPPPDQEEWNVVMSQST 175


>gi|239745116 PREDICTED: hypothetical protein XP_002343387 [Homo
           sapiens]
          Length = 175

 Score =  375 bits (964), Expect = e-105
 Identities = 175/175 (100%), Positives = 175/175 (100%)

Query: 1   MTRPLPESIRLLRHTGLVPPTPVPLGYPHQSFVSQPHPFSKQPSPCPRQSPQGDFGWVSP 60
           MTRPLPESIRLLRHTGLVPPTPVPLGYPHQSFVSQPHPFSKQPSPCPRQSPQGDFGWVSP
Sbjct: 1   MTRPLPESIRLLRHTGLVPPTPVPLGYPHQSFVSQPHPFSKQPSPCPRQSPQGDFGWVSP 60

Query: 61  GASRSITGPSSPAAPSLISLGSLGSHLQGARPHPRQSSLGDFGLVTPGTPCCRLCPPLLL 120
           GASRSITGPSSPAAPSLISLGSLGSHLQGARPHPRQSSLGDFGLVTPGTPCCRLCPPLLL
Sbjct: 61  GASRSITGPSSPAAPSLISLGSLGSHLQGARPHPRQSSLGDFGLVTPGTPCCRLCPPLLL 120

Query: 121 PQGRPPWVLCAGVSKELGPNPVLPSPIVEQRLGHGADMVPPPDQEEWNVVMSQST 175
           PQGRPPWVLCAGVSKELGPNPVLPSPIVEQRLGHGADMVPPPDQEEWNVVMSQST
Sbjct: 121 PQGRPPWVLCAGVSKELGPNPVLPSPIVEQRLGHGADMVPPPDQEEWNVVMSQST 175


>gi|239756247 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 175

 Score =  361 bits (926), Expect = e-100
 Identities = 167/175 (95%), Positives = 169/175 (96%)

Query: 1   MTRPLPESIRLLRHTGLVPPTPVPLGYPHQSFVSQPHPFSKQPSPCPRQSPQGDFGWVSP 60
           MTRPLPESIRLLRHTGLVPPTPVP GYPHQSFVSQPHPF KQPSPCPRQSPQGDFGWV+P
Sbjct: 1   MTRPLPESIRLLRHTGLVPPTPVPXGYPHQSFVSQPHPFRKQPSPCPRQSPQGDFGWVTP 60

Query: 61  GASRSITGPSSPAAPSLISLGSLGSHLQGARPHPRQSSLGDFGLVTPGTPCCRLCPPLLL 120
           GASRS+TGPSSPAAPSLISLGSLGSHL GARPHPRQSSLGDFGLVTPG PCCRLCPPLLL
Sbjct: 61  GASRSVTGPSSPAAPSLISLGSLGSHLXGARPHPRQSSLGDFGLVTPGAPCCRLCPPLLL 120

Query: 121 PQGRPPWVLCAGVSKELGPNPVLPSPIVEQRLGHGADMVPPPDQEEWNVVMSQST 175
           PQGRPPWVLCAGVSKELGPNPVLPSPIVEQRL HGADMVPPPDQEEWNVVMSQ T
Sbjct: 121 PQGRPPWVLCAGVSKELGPNPVLPSPIVEQRLRHGADMVPPPDQEEWNVVMSQPT 175


>gi|4505195 mitogen-activated protein kinase kinase kinase 11 [Homo
           sapiens]
          Length = 847

 Score = 42.0 bits (97), Expect = 3e-04
 Identities = 32/111 (28%), Positives = 46/111 (41%), Gaps = 11/111 (9%)

Query: 19  PPTPVPLGYPHQSFVSQPHPFSKQPSPCPRQSPQGDFGWVSPGASRSITGPSSPAAPSLI 78
           PPTP PL       +    P  ++ +  PR+  +   G VSP    S + P +P  P   
Sbjct: 706 PPTPAPL------LLDLGIPVGQRSAKSPRREEEPRGGTVSPPPGTSRSAPGTPGTPRSP 759

Query: 79  SLGSLGSHLQGARPHPRQSSLGDFGLVTPGTPCCRLCPPLLLPQGRPPWVL 129
            LG +       RP P +S +  +  V+ G     L  P   P+ R PW L
Sbjct: 760 PLGLISR----PRPSPLRSRIDPWSFVSAGPRPSPLPSPQPAPR-RAPWTL 805



 Score = 37.7 bits (86), Expect = 0.005
 Identities = 49/165 (29%), Positives = 60/165 (36%), Gaps = 34/165 (20%)

Query: 3   RPLPESIRLLRHTGLVPPTPVPLGYPHQSFVSQPHPFSKQPSPCPRQSPQGDFGWVSPGA 62
           R L     LL   GL      P G   +   S   P +  P+PCP + P       SP  
Sbjct: 643 RALLRGTALLASLGLGRDLQPPGGPGRERGESPTTPPTPTPAPCPTEPPP------SPLI 696

Query: 63  SRSITGPSSP--AAPSLISLGSLGSHLQGARPHPRQSSLGDFGLVT---------PGTPC 111
             S+  P SP   AP L+ LG          P   +   G  G V+         PGTP 
Sbjct: 697 CFSLKTPDSPPTPAPLLLDLGIPVGQRSAKSPRREEEPRG--GTVSPPPGTSRSAPGTPG 754

Query: 112 CRLCPPL-LLPQGRP--------PWVLCAGVSKELGPNP-VLPSP 146
               PPL L+ + RP        PW   +      GP P  LPSP
Sbjct: 755 TPRSPPLGLISRPRPSPLRSRIDPWSFVSA-----GPRPSPLPSP 794


>gi|38201702 telomerase reverse transcriptase isoform 2 [Homo
           sapiens]
          Length = 1120

 Score = 38.9 bits (89), Expect = 0.002
 Identities = 43/149 (28%), Positives = 60/149 (40%), Gaps = 21/149 (14%)

Query: 12  LRHTGLVPPTPVPLGYPHQSFVSQPHPFSKQP----SPCPRQSPQGDFGWVSPGASRSIT 67
           +R  G+    P P         S+  P  K+P    +P P ++P G   W  PG +R   
Sbjct: 207 VREAGVPLGLPAPGARRRGGSASRSLPLPKRPRRGAAPEPERTPVGQGSWAHPGRTR--- 263

Query: 68  GPS-------SPAAPSLISLGSLGSHLQGAR-PHP---RQSSLGDFGLVTPGTPCCRLCP 116
           GPS       SPA P+     SL   L G R  HP   RQ   G      P  P    CP
Sbjct: 264 GPSDRGFCVVSPARPA-EEATSLEGALSGTRHSHPSVGRQHHAGPPSTSRPPRPWDTPCP 322

Query: 117 PLLLPQGRPPWVLCAGVSKELGPNPVLPS 145
           P+        ++  +G  ++L P+ +L S
Sbjct: 323 PVYAETKH--FLYSSGDKEQLRPSFLLSS 349


>gi|109633031 telomerase reverse transcriptase isoform 1 [Homo
           sapiens]
          Length = 1132

 Score = 38.9 bits (89), Expect = 0.002
 Identities = 43/149 (28%), Positives = 60/149 (40%), Gaps = 21/149 (14%)

Query: 12  LRHTGLVPPTPVPLGYPHQSFVSQPHPFSKQP----SPCPRQSPQGDFGWVSPGASRSIT 67
           +R  G+    P P         S+  P  K+P    +P P ++P G   W  PG +R   
Sbjct: 207 VREAGVPLGLPAPGARRRGGSASRSLPLPKRPRRGAAPEPERTPVGQGSWAHPGRTR--- 263

Query: 68  GPS-------SPAAPSLISLGSLGSHLQGAR-PHP---RQSSLGDFGLVTPGTPCCRLCP 116
           GPS       SPA P+     SL   L G R  HP   RQ   G      P  P    CP
Sbjct: 264 GPSDRGFCVVSPARPA-EEATSLEGALSGTRHSHPSVGRQHHAGPPSTSRPPRPWDTPCP 322

Query: 117 PLLLPQGRPPWVLCAGVSKELGPNPVLPS 145
           P+        ++  +G  ++L P+ +L S
Sbjct: 323 PVYAETKH--FLYSSGDKEQLRPSFLLSS 349


>gi|169216359 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 225

 Score = 37.0 bits (84), Expect = 0.009
 Identities = 29/82 (35%), Positives = 36/82 (43%), Gaps = 11/82 (13%)

Query: 11  LLRHTGLVPPTPVPLGYPH---------QSFVSQPHPFSKQPSP-CPRQSPQGDFGWVSP 60
           L R+    PP P P   P           S    PHP  ++P+P   R  P G  GWVS 
Sbjct: 77  LQRNASEDPPPPGPFRAPSPGSPRCQRPASPAPHPHPTLERPAPRGVRCFPAGTRGWVSI 136

Query: 61  GASRSITGPSSPAAPSLISLGS 82
               S   P +PAAP+  SLG+
Sbjct: 137 ALGGS-AAPGNPAAPASPSLGA 157


>gi|169216600 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 225

 Score = 37.0 bits (84), Expect = 0.009
 Identities = 29/82 (35%), Positives = 36/82 (43%), Gaps = 11/82 (13%)

Query: 11  LLRHTGLVPPTPVPLGYPH---------QSFVSQPHPFSKQPSP-CPRQSPQGDFGWVSP 60
           L R+    PP P P   P           S    PHP  ++P+P   R  P G  GWVS 
Sbjct: 77  LQRNASEDPPPPGPFRAPSPGSPRCQRPASPAPHPHPTLERPAPRGVRCFPAGTRGWVSI 136

Query: 61  GASRSITGPSSPAAPSLISLGS 82
               S   P +PAAP+  SLG+
Sbjct: 137 ALGGS-AAPGNPAAPASPSLGA 157


>gi|190343021 Sec24-related protein D [Homo sapiens]
          Length = 1032

 Score = 37.0 bits (84), Expect = 0.009
 Identities = 49/176 (27%), Positives = 64/176 (36%), Gaps = 33/176 (18%)

Query: 16  GLVPPTPVPLGYPHQ----SFVSQPHPFSKQPSPCPRQSPQGDFGWVSPGASRSITGPSS 71
           G++PP P P G PHQ       +  HP  + P P P  +         P A  S  GP S
Sbjct: 55  GMLPPGPPPPG-PHQFGQNGAHATGHPPQRFPGPPPVNNVASSHAPYQPSAQSSYPGPIS 113

Query: 72  PAA----PSLISLGSLGSHLQGARPHPRQSSLGDFGLVTPGTPCCRLCPPLLLPQGR--- 124
            ++     S +S   + S+  G  P P Q   G     +  TP     P +L P  +   
Sbjct: 114 TSSVTQLGSQLSAMQINSYGSGMAP-PSQGPPGPLSATSLQTPPRPPQPSILQPGSQVLP 172

Query: 125 -PPWVLCAGVSKEL-----------GPNP----VLPSPIVEQRLGHGADMVPPPDQ 164
            PP  L    +  L           GP P      P P+  Q LG G     PP Q
Sbjct: 173 PPPTTLNGPGASPLPLPMYRPDGLSGPPPPNAQYQPPPLPGQTLGAGY----PPQQ 224


>gi|21237805 SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin c2 isoform a [Homo sapiens]
          Length = 1214

 Score = 37.0 bits (84), Expect = 0.009
 Identities = 28/81 (34%), Positives = 32/81 (39%), Gaps = 3/81 (3%)

Query: 16   GLVPPTPVPLGYPH--QSFVSQPHPFSKQPSPCPRQSPQGDFGWVSPGASRSITGPSSPA 73
            G VPP   P G PH    F +Q  P S  P   P     G  G    G    +  P  P 
Sbjct: 1034 GAVPPGVPPPG-PHGPSPFPNQQTPPSMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPPP 1092

Query: 74   APSLISLGSLGSHLQGARPHP 94
            APS+I  GSL   +    P P
Sbjct: 1093 APSIIPFGSLADSISINLPAP 1113


>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
           sapiens]
          Length = 1124

 Score = 36.2 bits (82), Expect = 0.015
 Identities = 35/120 (29%), Positives = 42/120 (35%), Gaps = 14/120 (11%)

Query: 43  PSPCPRQSPQGDFGWVSPGASRSITGPSSPAAPSLISLGSLGSHLQGARPHPRQSSLGDF 102
           P+PCP Q+P        P    SI  P   A P+L S       LQG    P    L   
Sbjct: 564 PAPCPLQAPPSPLTTPPPETPSSIATPPPQAPPALAS-----PPLQGLPSPP----LSPL 614

Query: 103 GLVTPGTPCCRLCPPLLLPQGRPPWVLCAGVSKELGPNPVLPSPIVEQRLGHGADMVPPP 162
               P  P     PPL  P   P       +S    P+P  P+ +    L   A   PPP
Sbjct: 615 ATPPPQAPPXLALPPLQAPPSPP---ASPPLSPLATPSPQAPNALAVHLL--QAPFSPPP 669



 Score = 28.1 bits (61), Expect = 4.1
 Identities = 43/160 (26%), Positives = 56/160 (35%), Gaps = 23/160 (14%)

Query: 18  VPPTPVPLGYPHQSFVSQPH---------PFSKQPSPCPRQSPQGDFGWVSPGASRSITG 68
           VPP+P P   P     + P          P    PSP P   P      +SP A      
Sbjct: 737 VPPSP-PASPPMSPSATPPPRVPPLLAAPPLQVPPSP-PASLP------MSPLAKPPPQA 788

Query: 69  PSSPAAPSLISLGSLGSHLQGARPHPRQSSLGDFGLVT--PGTPCCRLCPPLLLPQGRP- 125
           P + A P L +L S  +   G  P    +SL    L T  P  P     P L +P   P 
Sbjct: 789 PPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPA 848

Query: 126 -PWVLCAGVSKELGPNPVLPSPIVEQRLGHGADMVPPPDQ 164
            P +         GP+  +  P +   L  G    PPP +
Sbjct: 849 SPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPP--PPPSR 886



 Score = 27.7 bits (60), Expect = 5.3
 Identities = 37/109 (33%), Positives = 40/109 (36%), Gaps = 16/109 (14%)

Query: 19  PPTPVPLGYPHQSFVSQPHPFSKQPSPCPRQSPQGDFGWVSPGASRSITGPSSPAAPSLI 78
           PP   PL  P     S P   S  P+  P  SP      + P  + S     SP AP   
Sbjct: 451 PPDSPPLQAPLSLPASPPLQTSLSPAVSPLSSPL----TIHPLQALSSLASHSPQAP--- 503

Query: 79  SLGSLGSHLQGARPHPRQSSLGDFGLVTPGTPCCRLCPPL-LLPQGRPP 126
            L SL        P   QSSL    L TP  P     PPL  LP   PP
Sbjct: 504 -LSSL-----IMPPLETQSSLAPPSLQTP--PASLTTPPLENLPSLAPP 544



 Score = 26.9 bits (58), Expect = 9.0
 Identities = 35/133 (26%), Positives = 45/133 (33%), Gaps = 29/133 (21%)

Query: 19  PP--TPVPLGYPHQSFVSQPHPFSKQPSPCPRQSPQG----------DFGWVSP-GASRS 65
           PP  TP+PL  P  S           P+  P Q+P                + P     S
Sbjct: 335 PPLATPLPLAPPSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHS 394

Query: 66  ITGPSSPAAPSLISLGSLGSHLQGARP-----------HPRQSSLGDFGLVTPGTPCCRL 114
           +T PS  A PS ++L SL +      P            PRQ+      L +P  P    
Sbjct: 395 LTSPSLQAPPSPLALSSLQATTSLGSPTLQATHSFLTMSPRQTQA---SLTSPSRPASTP 451

Query: 115 --CPPLLLPQGRP 125
              PPL  P   P
Sbjct: 452 PDSPPLQAPLSLP 464


>gi|153791535 general control of amino acid synthesis 5-like 2 [Homo
           sapiens]
          Length = 837

 Score = 35.8 bits (81), Expect = 0.019
 Identities = 25/86 (29%), Positives = 30/86 (34%), Gaps = 4/86 (4%)

Query: 20  PTPVPLGYPHQSFVSQPHPFSKQPSPCPRQSPQGDFGWVSPGASRSITGP-SSPAAPSLI 78
           PTP P   P  + +  P P    P+P P  +P G  G   PG      G    PA P L 
Sbjct: 26  PTPTPAPSPASAPIPTPTP---APAPAPAAAPAGSTGTGGPGVGSGGAGSGGDPARPGLS 82

Query: 79  SLGSLGSHLQGARPHPRQSSLGDFGL 104
                       R  PR   L   G+
Sbjct: 83  QQQRASQRKAQVRGLPRAKKLEKLGV 108


>gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens]
          Length = 703

 Score = 35.8 bits (81), Expect = 0.019
 Identities = 45/141 (31%), Positives = 52/141 (36%), Gaps = 18/141 (12%)

Query: 16  GLVPPTPVPL-GYPHQSFVSQPHPFSKQPSPCPRQSPQGDFGWVS---------PGASRS 65
           GL  P+ + + G P    V  P  F  +P P     P GD G            PGA   
Sbjct: 162 GLPGPSGITIPGKPGAQGVPGPPGFQGEPGPQGEPGPPGDRGLKGDNGVGQPGLPGAPGQ 221

Query: 66  ITGPSSPAAPSLISLGSLGSHLQGARPHPRQSSLGDFGLVTPGTPCCRLCPPLLLPQGRP 125
              P  P  P    LG  G  L G    P     G+ G   PG P  R  P  + P+G P
Sbjct: 222 GGAPGPPGLPGPAGLGKPG--LDGLPGAP--GDKGESG--PPGVPGPRGEPGAVGPKG-P 274

Query: 126 PWVLCAGVSKELG-PNPVLPS 145
           P V   GV    G P P  PS
Sbjct: 275 PGVDGVGVPGAAGLPGPQGPS 295


>gi|150170729 microtubule associated serine/threonine kinase 3 [Homo
            sapiens]
          Length = 1309

 Score = 35.4 bits (80), Expect = 0.025
 Identities = 37/127 (29%), Positives = 47/127 (37%), Gaps = 13/127 (10%)

Query: 34   SQPHPFSKQPS-PCPRQSPQ--GDFGWVSPGASRSITGPSSPAAPSLISLGSLGSHLQGA 90
            S  H  S  P+ PC   +P    D     P AS S + P+SPAA       SL  H   A
Sbjct: 1109 SPTHSLSPSPTTPCRSPAPDVPADTTASPPSASPSSSSPASPAAAGHTRPSSL--HGLAA 1166

Query: 91   RPHPRQSSLGDFGLVTPGTPCCRLCPPLLLPQGRPPWVLCAGVSKELGPNPVLPSPIVEQ 150
            +  P +   G     +   P    CPP+  P  R P          L  +P  P+     
Sbjct: 1167 KLGPPRPKTGRRKSTSSIPPSPLACPPISAPPPRSP--------SPLPGHPPAPARSPRL 1218

Query: 151  RLGHGAD 157
            R G  AD
Sbjct: 1219 RRGQSAD 1225


>gi|18959210 WIRE protein [Homo sapiens]
          Length = 440

 Score = 35.4 bits (80), Expect = 0.025
 Identities = 44/150 (29%), Positives = 53/150 (35%), Gaps = 21/150 (14%)

Query: 18  VPPTPVPLGYPHQSFVSQPHPFSKQPSPCP-RQSPQGDFGWVSPGASRS----ITGPSSP 72
           +PPTP    +P +     P P    PSP   R  P G      P   R       GPSSP
Sbjct: 209 LPPTPGQRLHPGREGPPAPPPVKPPPSPVNIRTGPSGQSLAPPPPPYRQPPGVPNGPSSP 268

Query: 73  AAPSLISLGSLGSHLQGARPHPRQSSLGDFGLVTPGTPCCRLCPPLLLPQGRPPWVLCAG 132
              S   L    + L    P P +      GL  P  P     P LL  +  PP    A 
Sbjct: 269 TNESAPELPQRHNSLHRKTPGPVR------GLAPP--PPTSASPSLLSNRPPPP----AR 316

Query: 133 VSKELGPNPVLPSPIVEQRLGHGADMVPPP 162
                G  P  P P++     +GA   PPP
Sbjct: 317 DPPSRGAAPPPPPPVIR----NGARDAPPP 342


>gi|68563515 keratinocyte proline-rich protein [Homo sapiens]
          Length = 579

 Score = 35.4 bits (80), Expect = 0.025
 Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 7/49 (14%)

Query: 6   PESIRLLRHTGLVPPTPVPLGYPHQSFVSQPHPF---SKQPSPCPRQSP 51
           PE +  LR T    P PVPL  P Q  + +P P     + P PCPR  P
Sbjct: 434 PEPLPALRPT----PRPVPLPRPGQCEIPEPRPCLQPCEHPEPCPRPEP 478


>gi|148237270 hypermethylated in cancer 1 isoform 2 [Homo sapiens]
          Length = 733

 Score = 35.0 bits (79), Expect = 0.033
 Identities = 37/117 (31%), Positives = 41/117 (35%), Gaps = 20/117 (17%)

Query: 19  PPTPVPLGYPHQSFVSQ---PHPFSKQPSPCPRQSP-QGDFGWVSPGASRSITGPSSPAA 74
           PP+  P  Y           P PF K     P   P +G  G  SPG       P  P  
Sbjct: 271 PPSAGPAAYKEPPLALPSLPPLPFQKLEEAAPPSDPFRGGSG--SPGPEP----PGRPDG 324

Query: 75  PSLI--------SLGSLGSHLQGAR--PHPRQSSLGDFGLVTPGTPCCRLCPPLLLP 121
           PSL+         LGS G  L   R  P  R    G    V+PG P   L PP   P
Sbjct: 325 PSLLYRWMKHEPGLGSYGDELGRERGSPSERCEERGGDAAVSPGGPPLGLAPPPRYP 381


>gi|61676186 hypermethylated in cancer 1 isoform 1 [Homo sapiens]
          Length = 714

 Score = 35.0 bits (79), Expect = 0.033
 Identities = 37/117 (31%), Positives = 41/117 (35%), Gaps = 20/117 (17%)

Query: 19  PPTPVPLGYPHQSFVSQ---PHPFSKQPSPCPRQSP-QGDFGWVSPGASRSITGPSSPAA 74
           PP+  P  Y           P PF K     P   P +G  G  SPG       P  P  
Sbjct: 252 PPSAGPAAYKEPPLALPSLPPLPFQKLEEAAPPSDPFRGGSG--SPGPEP----PGRPDG 305

Query: 75  PSLI--------SLGSLGSHLQGAR--PHPRQSSLGDFGLVTPGTPCCRLCPPLLLP 121
           PSL+         LGS G  L   R  P  R    G    V+PG P   L PP   P
Sbjct: 306 PSLLYRWMKHEPGLGSYGDELGRERGSPSERCEERGGDAAVSPGGPPLGLAPPPRYP 362


>gi|151108509 Rho GTPase-activating protein RICH2 [Homo sapiens]
          Length = 818

 Score = 35.0 bits (79), Expect = 0.033
 Identities = 30/94 (31%), Positives = 38/94 (40%), Gaps = 7/94 (7%)

Query: 6   PESIRLLRHTGLVPPTPVPLGYPH---QSFVSQPHPFSKQPSPCPRQSPQGDFGWVSPGA 62
           P ++R +       P  VP G P         QP P S  P+P    SP   +G   P  
Sbjct: 641 PHTLRKVSKKLAPIPPKVPFGQPGAMADQSAGQPSPVSLSPTPPSTPSP---YGLSYPQG 697

Query: 63  SRSITGPSSP-AAPSLISLGSLGSHLQGARPHPR 95
               +G  SP AAP L S     S L  +RP P+
Sbjct: 698 YSLASGQLSPAAAPPLASPSVFTSTLSKSRPTPK 731



 Score = 32.3 bits (72), Expect = 0.22
 Identities = 41/132 (31%), Positives = 50/132 (37%), Gaps = 13/132 (9%)

Query: 13  RHTGLVPPTPVPLGYPHQSFVSQPHPFSKQP--SP-CPRQSPQGDFGWVSPGASRSITGP 69
           R     PP+  P   P +     P P  +QP  SP  P  SP G  G + PG  R+ T  
Sbjct: 534 RKVSCAPPSMQPPAPPAELAAPLPSPLPEQPLDSPAAPALSPSG-LG-LQPGPERTSTTK 591

Query: 70  SSPAAPSLISLGSLGSHLQGARPHPRQSSLGDFGLVTPGTPCCRLCPPLLLPQGRPPWVL 129
           S   +P     GS GS  QG       +  G      PG        P   P  + P  L
Sbjct: 592 SKELSPGSAQKGSPGSS-QGT------ACAGTQPGAQPGAQPGASPSPSQPPADQSPHTL 644

Query: 130 CAGVSKELGPNP 141
              VSK+L P P
Sbjct: 645 -RKVSKKLAPIP 655


>gi|115430245 arylhydrocarbon receptor repressor [Homo sapiens]
          Length = 719

 Score = 34.7 bits (78), Expect = 0.043
 Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 3/64 (4%)

Query: 70  SSPAAPSLISLGSLGSHLQGARPHPRQSSLGDFGLVTPGTP--CCRLCPPLLLPQGRPPW 127
           + P +   + +  LG  ++GA+PH R ++ G    +TP  P  C  L P   LPQ  PP 
Sbjct: 596 TEPDSRQQVYISHLGHGVRGAQPHGRATA-GRSRELTPFHPAHCACLEPTDGLPQSEPPH 654

Query: 128 VLCA 131
            LCA
Sbjct: 655 QLCA 658


>gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]
          Length = 1682

 Score = 34.7 bits (78), Expect = 0.043
 Identities = 42/161 (26%), Positives = 54/161 (33%), Gaps = 41/161 (25%)

Query: 14  HTGLVPPTPVPLGYPHQSFVSQPHPFSKQPSPCPR-QSPQGDFGWVSPGASRS------- 65
           H+   P    P   PH S    P P S  P PCPR   P     W+   A R+       
Sbjct: 443 HSSRKPFLGAPAATPHLSL--PPGPSSPPPPPCPRLLRPPPPPAWLKGPACRAAREDGEI 500

Query: 66  -------ITGPSSPAAPSL-------------ISLGSLGSHLQGARPHPRQSSLGDFGLV 105
                    GP  PA P L              S+G+  SH     P P  SS       
Sbjct: 501 LEELFFGTEGPPRPAPPPLPHREGFLGPPASRFSVGTQDSHTPPTPPTPTTSSSNS---- 556

Query: 106 TPGTPCCRLCPPLLLPQGRPPWVLCAGVSKELGPNPVLPSP 146
             G+       P+  P   PP+     +++ + P P  PSP
Sbjct: 557 NSGSHSSSPAGPVSFPP--PPY-----LARSIDPLPRPPSP 590


>gi|24497589 aristaless related homeobox [Homo sapiens]
          Length = 562

 Score = 34.7 bits (78), Expect = 0.043
 Identities = 22/66 (33%), Positives = 27/66 (40%), Gaps = 2/66 (3%)

Query: 24  PLGYPHQSFVSQPHPFSK--QPSPCPRQSPQGDFGWVSPGASRSITGPSSPAAPSLISLG 81
           P G P    +S  HP S     SP P   P  D  W +  A+ +   PS P  P   SL 
Sbjct: 395 PPGLPFPGPLSATHPLSPYLDASPFPPHHPALDSAWTAAAAAAAAAFPSLPPPPGSASLP 454

Query: 82  SLGSHL 87
             G+ L
Sbjct: 455 PSGAPL 460


>gi|208022661 hypothetical protein LOC57701 [Homo sapiens]
          Length = 1334

 Score = 34.3 bits (77), Expect = 0.057
 Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 4/93 (4%)

Query: 1   MTRPLPESIRLLRHTGLVPPTP-VPLGYPHQSFVSQPHPFSKQPSPCP-RQSPQGDFGWV 58
           +T  +P++  +LR  G VPP+P +P  YP+ S   +    +   SP P R++P       
Sbjct: 587 LTLEVPQAPEVLRSPG-VPPSPCLPESYPYGSPQEKSLDKAGSESPHPGRRTPGNSSKKP 645

Query: 59  SPGASRSITGP-SSPAAPSLISLGSLGSHLQGA 90
           S G+ R    P S+P    L +LG L +  +GA
Sbjct: 646 SQGSGRRPGDPGSTPLRDRLAALGKLKTGPEGA 678


>gi|187937179 apoptosis-associated tyrosine kinase [Homo sapiens]
          Length = 1374

 Score = 33.9 bits (76), Expect = 0.074
 Identities = 27/97 (27%), Positives = 39/97 (40%), Gaps = 13/97 (13%)

Query: 15   TGLVPPTPVPLGYPH----------QSFVSQPHPFSKQPSPCPRQSPQGDFGWVSPGASR 64
            +GLVP  P P G             Q F+  P P   + +    Q P G      P   +
Sbjct: 1074 SGLVPEPPEPQGPAKVRPGPSPSCSQFFLLTPVPLRSEGNSSEFQGPPGLLS--GPAPQK 1131

Query: 65   SITGPSSPAAPSLISLGSLGSHLQGARPHPRQSSLGD 101
             + GP +P AP  ++L  L + L+G RP   +    D
Sbjct: 1132 RMGGPGTPRAPLRLALPGLPAALEG-RPEEEEEDSED 1167


>gi|163965366 nascent polypeptide-associated complex alpha subunit
           isoform a [Homo sapiens]
          Length = 2078

 Score = 33.9 bits (76), Expect = 0.074
 Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 4/74 (5%)

Query: 4   PLPESIRLLRHTGLVPPTPVPLGYPHQSFVSQPHPFSKQPSPCPRQSPQGDFGWVSPGAS 63
           P P ++  L   G+  P   P   P  S V+ P P     +P P+Q+P       SP  +
Sbjct: 865 PTPSAVTPLSPKGVTLP---PKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKA 921

Query: 64  RSITGPSS-PAAPS 76
           R+   P   PA+PS
Sbjct: 922 RATPAPKGIPASPS 935



 Score = 30.0 bits (66), Expect = 1.1
 Identities = 20/76 (26%), Positives = 30/76 (39%), Gaps = 7/76 (9%)

Query: 1   MTRPLPESIRLLRHTGLVPPTPVPLGYPHQSFVSQPHPFSKQPSPCPRQSPQGDFGWVSP 60
           MT   P+  R       +P +P P G P     + P P     +P P+ +P       +P
Sbjct: 913 MTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAP-------TP 965

Query: 61  GASRSITGPSSPAAPS 76
            A+   +    PA PS
Sbjct: 966 PAATPPSPKGGPATPS 981



 Score = 28.9 bits (63), Expect = 2.4
 Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 5/56 (8%)

Query: 19   PPTPVPLGYPHQSFVSQPHPFSKQPSPCPRQSPQGDFGWVSPGASRSITGPSSPAA 74
            P TP P G P    V+ P P      P    S +G      P    S  GP+ PAA
Sbjct: 1324 PGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKG-----GPTTPSSKEGPTPPAA 1374



 Score = 27.7 bits (60), Expect = 5.3
 Identities = 34/166 (20%), Positives = 56/166 (33%), Gaps = 23/166 (13%)

Query: 4    PLPESIRLLRHTGLVPPTPVPLGYPHQSFVSQPHPFSKQPSPCPRQSPQGDFGWVSPGAS 63
            P P+ +         P TP P+G P    V    P     +P  R+ P      +    +
Sbjct: 1479 PAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKT 1538

Query: 64   RSITGPSSPAAPSLISLGSLGSHLQGARPHPRQSSLGDFGLVTPGTPCCR--LCPPLLLP 121
             +   P     P  +++           P P+++         P TP  +    PP + P
Sbjct: 1539 PATLAPKEALIPPAMTV-----------PSPKKTPAIPTPKEAPATPSSKEASSPPAVTP 1587

Query: 122  ---QGRPPWVLCAGVSKELGPNPVLPSPIVEQRLGHGADMVPPPDQ 164
               +G P         KEL   P + SP  ++     A   P P++
Sbjct: 1588 STYKGAPS-------PKELLIPPAVTSPSPKEAPTPPAVTPPSPEK 1626



 Score = 26.9 bits (58), Expect = 9.0
 Identities = 27/101 (26%), Positives = 36/101 (35%), Gaps = 12/101 (11%)

Query: 19   PPTPVPLGYPHQSFVSQPHPFSKQPSPCPRQSPQGDFGWVSPGASRSITGPSSPAAPSLI 78
            P TP P G P     + P P     +P P+ +P       +P A   +T PS   +P+  
Sbjct: 977  PATPSPKGAPTPPAATPPSPKGGPATPSPKGAP-------TPPA---VTPPSPKGSPAAT 1026

Query: 79   SLGSLGSHLQGARPHPRQSSLGDFGLV--TPGTPCCRLCPP 117
                  S    A P   + S     L    P TP   L  P
Sbjct: 1027 PFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSP 1067


>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
           sapiens]
          Length = 503

 Score = 33.5 bits (75), Expect = 0.097
 Identities = 50/180 (27%), Positives = 58/180 (32%), Gaps = 35/180 (19%)

Query: 4   PLPESIRLLRHTGLVPPTPVPLGYPHQSFVSQPHPFSKQPSPCPRQSPQGDFGWVSPGAS 63
           P P   R   H   VPP P     P      +P   S+ P P P  S  G      P   
Sbjct: 268 PPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGP----PPLPP 323

Query: 64  RSITGPSSPAAPSL-ISLGSLGSHLQGARPHPRQSSLGDFGLVTPGTPCCRLCPPLLLPQ 122
            S     +P  P   +SL S    L    P P +S         P  P  R  PP+  P 
Sbjct: 324 SSSGNDETPRLPQRNLSLSSSTPPL----PSPGRSG------PLPPPPSERPPPPVRDPP 373

Query: 123 GR-------PPWVLCAGVSKELGPNPVLPS-------------PIVEQRLGHGADMVPPP 162
           GR       PP       S+ L   P LPS             P+   R   GA   PPP
Sbjct: 374 GRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPPPPP 433


>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
           sapiens]
          Length = 503

 Score = 33.5 bits (75), Expect = 0.097
 Identities = 50/180 (27%), Positives = 58/180 (32%), Gaps = 35/180 (19%)

Query: 4   PLPESIRLLRHTGLVPPTPVPLGYPHQSFVSQPHPFSKQPSPCPRQSPQGDFGWVSPGAS 63
           P P   R   H   VPP P     P      +P   S+ P P P  S  G      P   
Sbjct: 268 PPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGP----PPLPP 323

Query: 64  RSITGPSSPAAPSL-ISLGSLGSHLQGARPHPRQSSLGDFGLVTPGTPCCRLCPPLLLPQ 122
            S     +P  P   +SL S    L    P P +S         P  P  R  PP+  P 
Sbjct: 324 SSSGNDETPRLPQRNLSLSSSTPPL----PSPGRSG------PLPPPPSERPPPPVRDPP 373

Query: 123 GR-------PPWVLCAGVSKELGPNPVLPS-------------PIVEQRLGHGADMVPPP 162
           GR       PP       S+ L   P LPS             P+   R   GA   PPP
Sbjct: 374 GRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPPPPP 433


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.138    0.455 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,955,381
Number of Sequences: 37866
Number of extensions: 776118
Number of successful extensions: 3380
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 351
Number of HSP's that attempted gapping in prelim test: 3076
Number of HSP's gapped (non-prelim): 691
length of query: 175
length of database: 18,247,518
effective HSP length: 95
effective length of query: 80
effective length of database: 14,650,248
effective search space: 1172019840
effective search space used: 1172019840
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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