Guide to the Human Genome
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Name: LOC100288919 Sequence: fasta or formatted (219aa) NCBI GI: 239745066
Description:

PREDICTED: hypothetical protein XP_002344286

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         13           1
 C cysteine            5.9         13           1
 D aspartate           1.8          4           1
 E glutamate           1.8          4           1
 F phenylalanine       9.6         21           2
 G glycine             4.1          9           1
 H histidine           1.4          3           1
 I isoleucine         11.0         24           3
 K lysine              4.1          9           2
 L leucine            12.3         27           2
 M methionine          3.7          8           1
 N asparagine          2.3          5           1
 P proline             4.1          9           1
 Q glutamine           1.8          4           1
 R arginine            2.3          5           1
 S serine             10.5         23           1
 T threonine           5.9         13           1
 V valine              5.9         13           2
 W tryptophan          0.5          1           1
 Y tyrosine            5.0         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein XP_002344286 
OR11G2                0.532   olfactory receptor, family 11, subfamily G, member 2...
OR11H12               0.496   olfactory receptor, family 11, subfamily H, member 1...
OR11H6                0.494   olfactory receptor, family 11, subfamily H, member 6...
OR11H1                0.484   olfactory receptor, family 11, subfamily H, member 1...
OR11H4                0.468   olfactory receptor, family 11, subfamily H, member 4...
OR6N1                 0.377   olfactory receptor, family 6, subfamily N, member 1 ...
OR6N2                 0.372   olfactory receptor, family 6, subfamily N, member 2 ...
OR11L1                0.360   olfactory receptor, family 11, subfamily L, member 1...
OR6B1                 0.360   olfactory receptor, family 6, subfamily B, member 1 ...
OR6K3                 0.351   olfactory receptor, family 6, subfamily K, member 3 ...
OR2A1                 0.351   olfactory receptor, family 2, subfamily A, member 1 ...
OR2A42                0.351   olfactory receptor, family 2, subfamily A, member 42...
OR6P1                 0.348   olfactory receptor, family 6, subfamily P, member 1...
OR1L1                 0.348   olfactory receptor, family 1, subfamily L, member 1...
OR1L8                 0.346   olfactory receptor, family 1, subfamily L, member 8 ...
OR1L6                 0.341   olfactory receptor, family 1, subfamily L, member 6 ...
OR11A1                0.341   olfactory receptor, family 11, subfamily A, member 1 ...
OR5AR1                0.339   olfactory receptor, family 5, subfamily AR, member 1...
OR6C3                 0.339   olfactory receptor, family 6, subfamily C, member 3 ...
OR6C1                 0.339   olfactory receptor, family 6, subfamily C, member 1 ...
OR2A5                 0.337   olfactory receptor, family 2, subfamily A, member 5 ...
OR1L3                 0.337   olfactory receptor, family 1, subfamily L, member 3 ...
OR6V1                 0.337   olfactory receptor, family 6, subfamily V, member 1 ...
OR6A2                 0.337   olfactory receptor, family 6, subfamily A, member 2 ...
OR5A1                 0.337   olfactory receptor, family 5, subfamily A, member 1 ...
OR1L4                 0.337   olfactory receptor, family 1, subfamily L, member 4 ...
OR8U8                 0.334   olfactory receptor, family 8, subfamily U, member 8 ...
OR6Y1                 0.334   olfactory receptor, family 6, subfamily Y, member 1 ...
OR8U1                 0.332   olfactory receptor, family 8, subfamily U, member 1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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