Search of human proteins with 239744067

Search of human proteins with 239744067

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239744067 PREDICTED: similar to Putative cathepsin L-like
protein 6 [Homo sapiens]
         (81 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239744067 PREDICTED: similar to Putative cathepsin L-like pro...   172   4e-44
gi|22202619 cathepsin L1 preproprotein [Homo sapiens]                 126   3e-30
gi|4503155 cathepsin L1 preproprotein [Homo sapiens]                  126   3e-30
gi|23110960 cathepsin L2 preproprotein [Homo sapiens]                 117   2e-27
gi|23110962 cathepsin S preproprotein [Homo sapiens]                   64   2e-11
gi|4503151 cathepsin K preproprotein [Homo sapiens]                    60   3e-10
gi|23110957 cathepsin H isoform b precursor [Homo sapiens]             45   1e-05
gi|23110955 cathepsin H isoform a preproprotein [Homo sapiens]         45   1e-05
gi|6042196 cathepsin F [Homo sapiens]                                  40   3e-04
gi|110835715 calcyphosine-like [Homo sapiens]                          29   0.71 
gi|110835717 calcyphosine-like [Homo sapiens]                          29   0.71 
gi|51093861 caspase recruitment domain protein 10 [Homo sapiens]       29   0.92 
gi|223555935 dynein, axonemal, heavy polypeptide 14 isoform 1 [H...    28   2.1  
gi|17864088 sorting nexin 13 [Homo sapiens]                            26   6.0  
gi|189083844 cathepsin C isoform a preproprotein [Homo sapiens]        26   7.8  
gi|153792375 mitochondrial carrier triple repeat 6 [Homo sapiens]      26   7.8  

>gi|239744067 PREDICTED: similar to Putative cathepsin L-like
          protein 6 [Homo sapiens]
          Length = 81

 Score =  172 bits (437), Expect = 4e-44
 Identities = 81/81 (100%), Positives = 81/81 (100%)

Query: 1  MKMTEQHNQEYSQGKHSFTMAMNTFGDMTTEEFRQVMNGFQYQKHRNGKQFQERLLLEIP 60
          MKMTEQHNQEYSQGKHSFTMAMNTFGDMTTEEFRQVMNGFQYQKHRNGKQFQERLLLEIP
Sbjct: 1  MKMTEQHNQEYSQGKHSFTMAMNTFGDMTTEEFRQVMNGFQYQKHRNGKQFQERLLLEIP 60

Query: 61 TSVDWREKGYVTPVKDQVRLC 81
          TSVDWREKGYVTPVKDQVRLC
Sbjct: 61 TSVDWREKGYVTPVKDQVRLC 81


>gi|22202619 cathepsin L1 preproprotein [Homo sapiens]
          Length = 333

 Score =  126 bits (317), Expect = 3e-30
 Identities = 60/77 (77%), Positives = 64/77 (83%)

Query: 1   MKMTEQHNQEYSQGKHSFTMAMNTFGDMTTEEFRQVMNGFQYQKHRNGKQFQERLLLEIP 60
           MKM E HNQEY +GKHSFTMAMN FGDMT+EEFRQVMNGFQ +K R GK FQE L  E P
Sbjct: 56  MKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPRKGKVFQEPLFYEAP 115

Query: 61  TSVDWREKGYVTPVKDQ 77
            SVDWREKGYVTPVK+Q
Sbjct: 116 RSVDWREKGYVTPVKNQ 132


>gi|4503155 cathepsin L1 preproprotein [Homo sapiens]
          Length = 333

 Score =  126 bits (317), Expect = 3e-30
 Identities = 60/77 (77%), Positives = 64/77 (83%)

Query: 1   MKMTEQHNQEYSQGKHSFTMAMNTFGDMTTEEFRQVMNGFQYQKHRNGKQFQERLLLEIP 60
           MKM E HNQEY +GKHSFTMAMN FGDMT+EEFRQVMNGFQ +K R GK FQE L  E P
Sbjct: 56  MKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPRKGKVFQEPLFYEAP 115

Query: 61  TSVDWREKGYVTPVKDQ 77
            SVDWREKGYVTPVK+Q
Sbjct: 116 RSVDWREKGYVTPVKNQ 132


>gi|23110960 cathepsin L2 preproprotein [Homo sapiens]
          Length = 334

 Score =  117 bits (293), Expect = 2e-27
 Identities = 55/77 (71%), Positives = 62/77 (80%)

Query: 1   MKMTEQHNQEYSQGKHSFTMAMNTFGDMTTEEFRQVMNGFQYQKHRNGKQFQERLLLEIP 60
           MKM E HN EYSQGKH FTMAMN FGDMT EEFRQ+M  F+ QK R GK F+E L L++P
Sbjct: 56  MKMIELHNGEYSQGKHGFTMAMNAFGDMTNEEFRQMMGCFRNQKFRKGKVFREPLFLDLP 115

Query: 61  TSVDWREKGYVTPVKDQ 77
            SVDWR+KGYVTPVK+Q
Sbjct: 116 KSVDWRKKGYVTPVKNQ 132


>gi|23110962 cathepsin S preproprotein [Homo sapiens]
          Length = 331

 Score = 64.3 bits (155), Expect = 2e-11
 Identities = 36/81 (44%), Positives = 47/81 (58%), Gaps = 7/81 (8%)

Query: 1   MKMTEQHNQEYSQGKHSFTMAMNTFGDMTTEEFRQVMNGF----QYQKHRNGKQFQERLL 56
           +K    HN E+S G HS+ + MN  GDMT+EE   +M+      Q+Q++   K    R+L
Sbjct: 56  LKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSLRVPSQWQRNITYKSNPNRIL 115

Query: 57  LEIPTSVDWREKGYVTPVKDQ 77
              P SVDWREKG VT VK Q
Sbjct: 116 ---PDSVDWREKGCVTEVKYQ 133


>gi|4503151 cathepsin K preproprotein [Homo sapiens]
          Length = 329

 Score = 60.5 bits (145), Expect = 3e-10
 Identities = 34/80 (42%), Positives = 44/80 (55%), Gaps = 3/80 (3%)

Query: 1   MKMTEQHNQEYSQGKHSFTMAMNTFGDMTTEEFRQVMNGFQY---QKHRNGKQFQERLLL 57
           +K    HN E S G H++ +AMN  GDMT+EE  Q M G +        N   +      
Sbjct: 54  LKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPLSHSRSNDTLYIPEWEG 113

Query: 58  EIPTSVDWREKGYVTPVKDQ 77
             P SVD+R+KGYVTPVK+Q
Sbjct: 114 RAPDSVDYRKKGYVTPVKNQ 133


>gi|23110957 cathepsin H isoform b precursor [Homo sapiens]
          Length = 323

 Score = 45.4 bits (106), Expect = 1e-05
 Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 7/71 (9%)

Query: 11  YSQGKHSFTMAMNTFGDMTTEEFRQVMNGFQYQKHRNGKQFQERLLL---EIPTSVDWRE 67
           ++ G H+F MA+N F DM+   F ++ + + + + +N    +   L      P SVDWR+
Sbjct: 56  HNNGNHTFKMALNQFSDMS---FAEIKHKYLWSEPQNCSATKSNYLRGTGPYPPSVDWRK 112

Query: 68  KG-YVTPVKDQ 77
           KG +V+PVK+Q
Sbjct: 113 KGNFVSPVKNQ 123


>gi|23110955 cathepsin H isoform a preproprotein [Homo sapiens]
          Length = 335

 Score = 45.4 bits (106), Expect = 1e-05
 Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 7/71 (9%)

Query: 11  YSQGKHSFTMAMNTFGDMTTEEFRQVMNGFQYQKHRNGKQFQERLLL---EIPTSVDWRE 67
           ++ G H+F MA+N F DM+   F ++ + + + + +N    +   L      P SVDWR+
Sbjct: 68  HNNGNHTFKMALNQFSDMS---FAEIKHKYLWSEPQNCSATKSNYLRGTGPYPPSVDWRK 124

Query: 68  KG-YVTPVKDQ 77
           KG +V+PVK+Q
Sbjct: 125 KGNFVSPVKNQ 135


>gi|6042196 cathepsin F [Homo sapiens]
          Length = 484

 Score = 40.4 bits (93), Expect = 3e-04
 Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 1/54 (1%)

Query: 25  FGDMTTEEFRQVMNGFQYQKHRNGKQFQERLLLEI-PTSVDWREKGYVTPVKDQ 77
           F D+T EEFR +      +K    K  Q + + ++ P   DWR KG VT VKDQ
Sbjct: 236 FSDLTEEEFRTIYLNTLLRKEPGNKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQ 289


>gi|110835715 calcyphosine-like [Homo sapiens]
          Length = 208

 Score = 29.3 bits (64), Expect = 0.71
 Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 2/50 (4%)

Query: 26  GDMTTEEFRQVMNGFQYQKHRNGKQFQERLLLEIPTSVD--WREKGYVTP 73
           G +T E+ R+V N   + K++NG+  +E++  +   + D  + + G VTP
Sbjct: 129 GVITIEDLREVYNAKHHPKYQNGEWSEEQVFRKFLDNFDSPYDKDGLVTP 178


>gi|110835717 calcyphosine-like [Homo sapiens]
          Length = 208

 Score = 29.3 bits (64), Expect = 0.71
 Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 2/50 (4%)

Query: 26  GDMTTEEFRQVMNGFQYQKHRNGKQFQERLLLEIPTSVD--WREKGYVTP 73
           G +T E+ R+V N   + K++NG+  +E++  +   + D  + + G VTP
Sbjct: 129 GVITIEDLREVYNAKHHPKYQNGEWSEEQVFRKFLDNFDSPYDKDGLVTP 178


>gi|51093861 caspase recruitment domain protein 10 [Homo sapiens]
          Length = 1032

 Score = 28.9 bits (63), Expect = 0.92
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)

Query: 30  TEEFRQVMNGFQYQKHRNGKQFQERLLLEIPTSVDWRE 67
           T   R++  G Q +  R G    ER+LL+I    DWRE
Sbjct: 291 TASLRELQEGLQQEASRPGAPGSERILLDI-LEHDWRE 327


>gi|223555935 dynein, axonemal, heavy polypeptide 14 isoform 1 [Homo
           sapiens]
          Length = 4515

 Score = 27.7 bits (60), Expect = 2.1
 Identities = 12/51 (23%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 19  TMAMNTFGDMTTEEFRQVMNGFQ-YQKHRNGKQFQERLLLEIPTSVDWREK 68
           +M +++ G++T++EF  ++N F+ Y +H      ++R+ +    S+D++ +
Sbjct: 729 SMKISSMGELTSKEFEAILNRFRNYFRHIVNMAIEKRIGIFNVVSLDYQSE 779


>gi|17864088 sorting nexin 13 [Homo sapiens]
          Length = 957

 Score = 26.2 bits (56), Expect = 6.0
 Identities = 12/31 (38%), Positives = 16/31 (51%)

Query: 8   NQEYSQGKHSFTMAMNTFGDMTTEEFRQVMN 38
           N+ YS+GK  F   M+TF +      R V N
Sbjct: 675 NKAYSKGKGDFARKMDTFVNPLRNSMRNVSN 705


>gi|189083844 cathepsin C isoform a preproprotein [Homo sapiens]
          Length = 463

 Score = 25.8 bits (55), Expect = 7.8
 Identities = 11/28 (39%), Positives = 19/28 (67%), Gaps = 3/28 (10%)

Query: 53  ERLLLEIPTSVDWREK---GYVTPVKDQ 77
           ++ +L +PTS DWR      +V+PV++Q
Sbjct: 225 QQKILHLPTSWDWRNVHGINFVSPVRNQ 252


>gi|153792375 mitochondrial carrier triple repeat 6 [Homo sapiens]
          Length = 307

 Score = 25.8 bits (55), Expect = 7.8
 Identities = 10/28 (35%), Positives = 12/28 (42%)

Query: 43 QKHRNGKQFQERLLLEIPTSVDWREKGY 70
          Q H  GK+ Q R   E P    W  + Y
Sbjct: 4  QNHSPGKELQHRTRAEAPGKKSWHSQAY 31


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.131    0.391 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,906,948
Number of Sequences: 37866
Number of extensions: 98045
Number of successful extensions: 304
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 286
Number of HSP's gapped (non-prelim): 16
length of query: 81
length of database: 18,247,518
effective HSP length: 53
effective length of query: 28
effective length of database: 16,240,620
effective search space: 454737360
effective search space used: 454737360
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.