Guide to the Human Genome
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Name: MCART6 Sequence: fasta or formatted (307aa) NCBI GI: 153792375
Description:

mitochondrial carrier triple repeat 6

Referenced in:

Mitochondria

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         21           2
 C cysteine            0.7          2           1
 D aspartate           2.3          7           1
 E glutamate           3.3         10           1
 F phenylalanine       4.9         15           1
 G glycine             8.8         27           2
 H histidine           3.6         11           1
 I isoleucine          3.6         11           1
 K lysine              3.9         12           2
 L leucine            12.7         39           3
 M methionine          2.0          6           1
 N asparagine          2.9          9           1
 P proline             5.2         16           2
 Q glutamine           5.5         17           2
 R arginine            5.9         18           1
 S serine              9.1         28           2
 T threonine           4.9         15           2
 V valine              6.8         21           2
 W tryptophan          3.3         10           1
 Y tyrosine            3.9         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitochondrial carrier triple repeat 6 
MCART1                0.222   mitochondrial carrier triple repeat 1 
MCART2                0.217   mitochondrial carrier triple repeat 2 
SLC25A21              0.061   solute carrier family 25 (mitochondrial oxodicarboxy...
SLC25A45              0.044   solute carrier family 25, member 45 isoform a [Homo...
SLC25A45              0.041   solute carrier family 25, member 45 isoform b [Homo...
SLC25A29              0.035   solute carrier family 25, member 29 
SLC25A14              0.033   solute carrier family 25, member 14 isoform UCP5L [Ho...
SLC25A14              0.033   solute carrier family 25, member 14 isoform UCP5S [H...
SLC25A30              0.033   solute carrier family 25, member 30 
SLC25A13              0.031   solute carrier family 25, member 13 isoform 2 
SLC25A13              0.031   solute carrier family 25, member 13 isoform 1 [Homo...
SLC25A24              0.031   solute carrier family 25 member 24 isoform 1 
SLC25A24              0.031   solute carrier family 25 member 24 isoform 2 
UCP2                  0.026   uncoupling protein 2 
SLC25A35              0.025   solute carrier family 25, member 35 
SLC25A20              0.025   carnitine/acylcarnitine translocase 
C14orf68              0.023   chromosome 14 open reading frame 68 
SLC25A12              0.021   solute carrier family 25, member 12 
SLC25A39              0.021   solute carrier family 25, member 39 isoform b 
SLC25A39              0.021   solute carrier family 25, member 39 isoform a [Homo...
SLC25A19              0.020   solute carrier family 25, member 19 
SLC25A19              0.020   solute carrier family 25, member 19 
SLC25A19              0.020   solute carrier family 25, member 19 
SLC25A15              0.016   mitochondrial ornithine transporter 1 
SLC25A28              0.015   solute carrier family 25, member 28 
SLC25A18              0.015   solute carrier 
LOC100292202          0.013   PREDICTED: similar to solute carrier family 25, mem...
LOC100292202          0.013   PREDICTED: similar to solute carrier family 25, mem...
SLC25A25              0.013   solute carrier family 25, member 25 isoform c 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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