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Search of human proteins with 239743622
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239743622 PREDICTED: hypothetical protein XP_002342908 [Homo
sapiens]
(145 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239754942 PREDICTED: hypothetical protein [Homo sapiens] 296 5e-81
gi|239749484 PREDICTED: hypothetical protein [Homo sapiens] 296 5e-81
gi|239743622 PREDICTED: hypothetical protein XP_002342908 [Homo ... 296 5e-81
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 41 4e-04
gi|169171388 PREDICTED: hypothetical protein [Homo sapiens] 39 0.002
gi|239749096 PREDICTED: hypothetical protein [Homo sapiens] 39 0.002
gi|239743123 PREDICTED: hypothetical protein [Homo sapiens] 39 0.002
gi|38787935 BMP-2 inducible kinase isoform a [Homo sapiens] 39 0.002
gi|38787904 BMP-2 inducible kinase isoform b [Homo sapiens] 39 0.002
gi|21687252 zinc finger protein 296 [Homo sapiens] 37 0.004
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 37 0.006
gi|5730027 KH domain containing, RNA binding, signal transductio... 37 0.008
gi|59806361 hypothetical protein LOC387104 [Homo sapiens] 35 0.017
gi|169206171 PREDICTED: hypothetical protein [Homo sapiens] 35 0.022
gi|239751791 PREDICTED: hypothetical protein [Homo sapiens] 35 0.022
gi|239746282 PREDICTED: hypothetical protein XP_002343723 [Homo ... 35 0.022
gi|145309302 cell division cycle 2-like 5 isoform 1 [Homo sapiens] 35 0.022
gi|145309300 cell division cycle 2-like 5 isoform 2 [Homo sapiens] 35 0.022
gi|7710121 engrailed homeobox 2 [Homo sapiens] 34 0.038
gi|4758024 coilin [Homo sapiens] 34 0.038
gi|26787962 advanced glycosylation end product-specific receptor... 34 0.049
gi|169206489 PREDICTED: hypothetical protein [Homo sapiens] 33 0.064
gi|169205942 PREDICTED: hypothetical protein [Homo sapiens] 33 0.064
gi|25777645 small conductance calcium-activated potassium channe... 33 0.064
gi|239754620 PREDICTED: hypothetical protein [Homo sapiens] 33 0.084
gi|51702521 POU domain, class 3, transcription factor 2 [Homo sa... 33 0.084
gi|122937319 even-skipped homeobox 2 [Homo sapiens] 33 0.084
gi|4507163 SRY (sex determining region Y)-box 4 [Homo sapiens] 33 0.11
gi|239751491 PREDICTED: hypothetical protein XP_002347883 [Homo ... 33 0.11
gi|239745989 PREDICTED: hypothetical protein XP_002344188 [Homo ... 33 0.11
>gi|239754942 PREDICTED: hypothetical protein [Homo sapiens]
Length = 145
Score = 296 bits (757), Expect = 5e-81
Identities = 145/145 (100%), Positives = 145/145 (100%)
Query: 1 MQSLLEHGLLLLLFFLLPIHDGQDDFPLLLREVAEVRHLGLQRRLRGRRDGSQAAPGPDR 60
MQSLLEHGLLLLLFFLLPIHDGQDDFPLLLREVAEVRHLGLQRRLRGRRDGSQAAPGPDR
Sbjct: 1 MQSLLEHGLLLLLFFLLPIHDGQDDFPLLLREVAEVRHLGLQRRLRGRRDGSQAAPGPDR 60
Query: 61 SRHVWWSRTTLGKRGGNSTGSGGTGAAAGAASSAGTNTYKSMAFNPRRQPPSPKKSRGRG 120
SRHVWWSRTTLGKRGGNSTGSGGTGAAAGAASSAGTNTYKSMAFNPRRQPPSPKKSRGRG
Sbjct: 61 SRHVWWSRTTLGKRGGNSTGSGGTGAAAGAASSAGTNTYKSMAFNPRRQPPSPKKSRGRG 120
Query: 121 GRARGEGGLRSALREMFLLPGGEGL 145
GRARGEGGLRSALREMFLLPGGEGL
Sbjct: 121 GRARGEGGLRSALREMFLLPGGEGL 145
>gi|239749484 PREDICTED: hypothetical protein [Homo sapiens]
Length = 145
Score = 296 bits (757), Expect = 5e-81
Identities = 145/145 (100%), Positives = 145/145 (100%)
Query: 1 MQSLLEHGLLLLLFFLLPIHDGQDDFPLLLREVAEVRHLGLQRRLRGRRDGSQAAPGPDR 60
MQSLLEHGLLLLLFFLLPIHDGQDDFPLLLREVAEVRHLGLQRRLRGRRDGSQAAPGPDR
Sbjct: 1 MQSLLEHGLLLLLFFLLPIHDGQDDFPLLLREVAEVRHLGLQRRLRGRRDGSQAAPGPDR 60
Query: 61 SRHVWWSRTTLGKRGGNSTGSGGTGAAAGAASSAGTNTYKSMAFNPRRQPPSPKKSRGRG 120
SRHVWWSRTTLGKRGGNSTGSGGTGAAAGAASSAGTNTYKSMAFNPRRQPPSPKKSRGRG
Sbjct: 61 SRHVWWSRTTLGKRGGNSTGSGGTGAAAGAASSAGTNTYKSMAFNPRRQPPSPKKSRGRG 120
Query: 121 GRARGEGGLRSALREMFLLPGGEGL 145
GRARGEGGLRSALREMFLLPGGEGL
Sbjct: 121 GRARGEGGLRSALREMFLLPGGEGL 145
>gi|239743622 PREDICTED: hypothetical protein XP_002342908 [Homo
sapiens]
Length = 145
Score = 296 bits (757), Expect = 5e-81
Identities = 145/145 (100%), Positives = 145/145 (100%)
Query: 1 MQSLLEHGLLLLLFFLLPIHDGQDDFPLLLREVAEVRHLGLQRRLRGRRDGSQAAPGPDR 60
MQSLLEHGLLLLLFFLLPIHDGQDDFPLLLREVAEVRHLGLQRRLRGRRDGSQAAPGPDR
Sbjct: 1 MQSLLEHGLLLLLFFLLPIHDGQDDFPLLLREVAEVRHLGLQRRLRGRRDGSQAAPGPDR 60
Query: 61 SRHVWWSRTTLGKRGGNSTGSGGTGAAAGAASSAGTNTYKSMAFNPRRQPPSPKKSRGRG 120
SRHVWWSRTTLGKRGGNSTGSGGTGAAAGAASSAGTNTYKSMAFNPRRQPPSPKKSRGRG
Sbjct: 61 SRHVWWSRTTLGKRGGNSTGSGGTGAAAGAASSAGTNTYKSMAFNPRRQPPSPKKSRGRG 120
Query: 121 GRARGEGGLRSALREMFLLPGGEGL 145
GRARGEGGLRSALREMFLLPGGEGL
Sbjct: 121 GRARGEGGLRSALREMFLLPGGEGL 145
>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
Length = 819
Score = 40.8 bits (94), Expect = 4e-04
Identities = 36/112 (32%), Positives = 50/112 (44%), Gaps = 10/112 (8%)
Query: 34 AEVRHLGLQRRLRGRRDGSQ-AAPGPDRSRHVWWSRTTLGKRGGNSTGSGGTGA-AAGAA 91
AE R +RR + R DG Q AA G + W R R G S G GG + +G A
Sbjct: 683 AEARKKPRRRRAKSRGDGGQNAAVGINP-----WQRRGKKPRLGKSRGGGGAKSRGSGGA 737
Query: 92 SSAGTNTYKSMAFNPRRQPPSPKKSRGRGGRARGEGGLRSALREMFLLPGGE 143
S G+ KS + ++ + K G G + R GG +S E + GG+
Sbjct: 738 KSRGSGGAKSRS---GKKAAASKSHGGGGAKRRRGGGAKSRSGEKAVTAGGQ 786
Score = 38.9 bits (89), Expect = 0.002
Identities = 32/104 (30%), Positives = 44/104 (42%), Gaps = 7/104 (6%)
Query: 34 AEVRHLGLQRRLRGRRDGSQAAPGPDRSRHVWWSRTTLGKRGGNSTGSGG--TGAAAGAA 91
A + LG + R RR AA G + R W G + G+G AAAG
Sbjct: 111 AGTKSLGGRGRKPRRRGQKAAATGSKKPR---WRAQKSAAAGSKNRGAGAQKAAAAAGVK 167
Query: 92 SSAGTNTYKSMAFNPRRQPPSPKKSRGRGGRARGEGGLRSALRE 135
S G K+ A + + S KK R RG ++RG+ + RE
Sbjct: 168 SQGGEKPQKAAAAGAKSR--SGKKPRRRGAKSRGDEDKKGRQRE 209
Score = 33.1 bits (74), Expect = 0.084
Identities = 31/111 (27%), Positives = 42/111 (37%), Gaps = 13/111 (11%)
Query: 40 GLQRRLRGRRDGSQAAPGPDRSRHVWWSRTTLGKRGGNSTGSGGTGAAAGAASSAGTNTY 99
G + RLRG++ A G + +H W + G G + G G AAA S G
Sbjct: 68 GKKARLRGQKG---AVAGKEARQH--WQKAA-GAGGAENRGGGEQKAAAAGTKSLGGRGR 121
Query: 100 KSMAFNPRRQPPSPKKSRGR-------GGRARGEGGLRSALREMFLLPGGE 143
K + KK R R G + RG G ++A GGE
Sbjct: 122 KPRRRGQKAAATGSKKPRWRAQKSAAAGSKNRGAGAQKAAAAAGVKSQGGE 172
Score = 30.4 bits (67), Expect = 0.55
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 75 GGNSTGSGGTGAAAGAASSAGTNTYKSMAFNPRRQPPSPKKSRGRGGRARGEGGLRSAL 133
G S GSGG ++AG+ + + A ++ + KK R R ++RG+GG +A+
Sbjct: 650 GATSRGSGGKQPRWQKPAAAGSESSAAAAVG--QEAEARKKPRRRRAKSRGDGGQNAAV 706
Score = 30.0 bits (66), Expect = 0.71
Identities = 25/90 (27%), Positives = 35/90 (38%), Gaps = 8/90 (8%)
Query: 46 RGRRDGSQAAPGPDRSRHVWWSRTTLGKRGGNSTGSGGTGA----AAGAASSAGTNTY-- 99
RG G +SR +++ GK+ S GG GA GA S +G
Sbjct: 724 RGGGGAKSRGSGGAKSRGSGGAKSRSGKKAAASKSHGGGGAKRRRGGGAKSRSGEKAVTA 783
Query: 100 --KSMAFNPRRQPPSPKKSRGRGGRARGEG 127
+ A ++PP K GRG +A G
Sbjct: 784 GGQKAAAAGGKKPPRVKSRGGRGQKAAAGG 813
Score = 26.6 bits (57), Expect = 7.9
Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 7/92 (7%)
Query: 43 RRLRGRRDGSQAAPGPDRSRHVWWSRTTLGKRGGNSTGSGGTGAAAGAASSAGTNTYKSM 102
RR + G+++ G D+ R G++ A AA G + K
Sbjct: 369 RRQKASAAGAKSRGGGDKKGLREAKRRGDGRKKPRWQNPRRRAQKAPAAKPRGGGSKK-- 426
Query: 103 AFNPRRQPPSPKKSRGRGGRARGEGGLRSALR 134
PRR+ PK ++ RGG++R GG + R
Sbjct: 427 ---PRRR--GPKAAKSRGGKSRSGGGKKPRRR 453
Score = 26.6 bits (57), Expect = 7.9
Identities = 20/80 (25%), Positives = 29/80 (36%), Gaps = 9/80 (11%)
Query: 49 RDGSQAAPGPDRSRHVWWSRTTLGKRGGNSTGSGGTGAAAGAASSAGTNTYKSMAFNPRR 108
R G PG W + G S G GG A A+ G + K ++
Sbjct: 588 RGGGDKQPG--------WQKAAAGVTKSRS-GDGGKKAWRQKAAGTGAKSRKKPWRRGQK 638
Query: 109 QPPSPKKSRGRGGRARGEGG 128
+ +K+ G +RG GG
Sbjct: 639 DAAAAEKAWATGATSRGSGG 658
>gi|169171388 PREDICTED: hypothetical protein [Homo sapiens]
Length = 154
Score = 38.9 bits (89), Expect = 0.002
Identities = 26/75 (34%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
Query: 73 KRGGNSTGSGGTGAAAGAASSAGTNTYKSMAFNPRRQP---PSPKKSRGRGGRARGEGGL 129
K GG G+GG AG A A RR P P+PK+ +G G AR +
Sbjct: 50 KGGGGGGGAGGAEGGAGGAGRARERAESGRPCGRRRHPQAEPAPKEFQGDGAAARADA-- 107
Query: 130 RSALREMFLLPGGEG 144
+A + PGGEG
Sbjct: 108 LTAGKSAEPAPGGEG 122
>gi|239749096 PREDICTED: hypothetical protein [Homo sapiens]
Length = 154
Score = 38.9 bits (89), Expect = 0.002
Identities = 26/75 (34%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
Query: 73 KRGGNSTGSGGTGAAAGAASSAGTNTYKSMAFNPRRQP---PSPKKSRGRGGRARGEGGL 129
K GG G+GG AG A A RR P P+PK+ +G G AR +
Sbjct: 50 KGGGGGGGAGGAEGGAGGAGRARERAESGRPCGRRRHPQAEPAPKEFQGDGAAARADA-- 107
Query: 130 RSALREMFLLPGGEG 144
+A + PGGEG
Sbjct: 108 LTAGKSAEPAPGGEG 122
>gi|239743123 PREDICTED: hypothetical protein [Homo sapiens]
Length = 123
Score = 38.9 bits (89), Expect = 0.002
Identities = 26/75 (34%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
Query: 73 KRGGNSTGSGGTGAAAGAASSAGTNTYKSMAFNPRRQP---PSPKKSRGRGGRARGEGGL 129
K GG G+GG AG A A RR P P+PK+ +G G AR +
Sbjct: 19 KGGGGGGGAGGAEGGAGGAGRARERAESGRPCGRRRHPQAEPAPKEFQGDGAAARADA-- 76
Query: 130 RSALREMFLLPGGEG 144
+A + PGGEG
Sbjct: 77 LTAGKSAEPAPGGEG 91
>gi|38787935 BMP-2 inducible kinase isoform a [Homo sapiens]
Length = 1161
Score = 38.5 bits (88), Expect = 0.002
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Query: 72 GKRGGNSTGSGGTGAAAGAASSAGTNTYKSMAFNPRRQPPSPKKSRGRGG-----RARGE 126
G GG + G G GA AGA +G ++ F R + ++S GG R
Sbjct: 12 GGSGGGAAGGGAGGAGAGAGCGSGGSSVGVRVFAVGRHQVTLEESLAEGGFSTVFLVRTH 71
Query: 127 GGLRSALREMFL 138
GG+R AL+ M++
Sbjct: 72 GGIRCALKRMYV 83
>gi|38787904 BMP-2 inducible kinase isoform b [Homo sapiens]
Length = 662
Score = 38.5 bits (88), Expect = 0.002
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Query: 72 GKRGGNSTGSGGTGAAAGAASSAGTNTYKSMAFNPRRQPPSPKKSRGRGG-----RARGE 126
G GG + G G GA AGA +G ++ F R + ++S GG R
Sbjct: 12 GGSGGGAAGGGAGGAGAGAGCGSGGSSVGVRVFAVGRHQVTLEESLAEGGFSTVFLVRTH 71
Query: 127 GGLRSALREMFL 138
GG+R AL+ M++
Sbjct: 72 GGIRCALKRMYV 83
>gi|21687252 zinc finger protein 296 [Homo sapiens]
Length = 475
Score = 37.4 bits (85), Expect = 0.004
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 13/92 (14%)
Query: 49 RDGSQAAPGPDRSRHVWWSRTTLGKRGGNSTGSGGTGAA-------AGAASSAGTNTYKS 101
++ + AAP P+ + H +TL GG G+ T +GA + G +T+ +
Sbjct: 296 QEQASAAP-PEPAVHAAAPTSTLPCSGGEGAGAAATAGVQEPGAPGSGAQAGPGGDTWGA 354
Query: 102 MAFNPRRQPP-----SPKKSRGRGGRARGEGG 128
+ R P SPKK GG++RG GG
Sbjct: 355 ITTEQRTDPANSQKASPKKMPKSGGKSRGPGG 386
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 37.0 bits (84), Expect = 0.006
Identities = 27/89 (30%), Positives = 36/89 (40%), Gaps = 3/89 (3%)
Query: 44 RLRGRRDGSQAAPGPDRSRHVWWSRTTLGKRGGNSTGSGGTGAAAGAASSAGTNTYKSMA 103
R RGRR + P P R SR G+ G+ G G G+ G + ++
Sbjct: 404 RRRGRR---RPRPAPPRGSSRSLSRARSSSDSGSGRGAPGPGPEPGSERGHGGHGKRAKE 460
Query: 104 FNPRRQPPSPKKSRGRGGRARGEGGLRSA 132
PR +P S S G GR G G S+
Sbjct: 461 RPPRARPASTSPSPGAHGRRGGPEGKSSS 489
Score = 36.6 bits (83), Expect = 0.008
Identities = 36/115 (31%), Positives = 47/115 (40%), Gaps = 21/115 (18%)
Query: 39 LGLQRRLRGRRDGSQAAPG---PDRSRHVWWSRTTLGKRGGNSTGSGGTGAAAGAASSAG 95
L + R GR+ GSQ + G P S W + GG+ SG G G+A S
Sbjct: 278 LSPKHRDEGRKTGSQRSSGSRSPSPSGGSGWGSPQ--RNGGSGQRSGAHGGRPGSAHSPP 335
Query: 96 TNTY--------KSMAFNPR-----RQPPSPKK---SRGRGGRARGEGGLRSALR 134
K+ A P ++ PSP+ S+GRGGRA G G R R
Sbjct: 336 DKPSSPSPRVRDKAAAAAPTPPARGKESPSPRSAPSSQGRGGRAAGGAGRRRRRR 390
>gi|5730027 KH domain containing, RNA binding, signal transduction
associated 1 [Homo sapiens]
Length = 443
Score = 36.6 bits (83), Expect = 0.008
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 8/67 (11%)
Query: 74 RGGNSTGSGGTGAAAGAASSAGTNTYKSMAFNPRRQPPSPKKSRGRGGRARGEGGLRSAL 133
R S+G G+ +GA + S+ P RQPP P +SRG GG +RG A
Sbjct: 10 RMSRSSGRSGSMDPSGA--------HPSVRQTPSRQPPLPHRSRGGGGGSRGGARASPAT 61
Query: 134 REMFLLP 140
+ LLP
Sbjct: 62 QPPPLLP 68
>gi|59806361 hypothetical protein LOC387104 [Homo sapiens]
Length = 947
Score = 35.4 bits (80), Expect = 0.017
Identities = 27/84 (32%), Positives = 35/84 (41%), Gaps = 10/84 (11%)
Query: 45 LRGRRDGSQAAPGPDRSRHVWWSRTTLGKRGGNSTGSGGTGAAAGAASSAGTNTYKSMAF 104
L GRR G P + R + + LG+ G GG G GA +G
Sbjct: 135 LGGRRPG----PPEEPPRELESVPSKLGEPPPLGEGGGGGGEGGGAGGGSGERE------ 184
Query: 105 NPRRQPPSPKKSRGRGGRARGEGG 128
QPP P+ RG+G RA+ GG
Sbjct: 185 GGAPQPPPPRGWRGKGVRAQQRGG 208
Score = 31.2 bits (69), Expect = 0.32
Identities = 26/89 (29%), Positives = 35/89 (39%), Gaps = 17/89 (19%)
Query: 47 GRRDGSQAAPGPDRSRHVWWSRTTLGKRGGNSTGSGGTGAAAGAASSAGTNTYKSMAFNP 106
G R+G P P R W + G R GSGG GA+ +SS+ T
Sbjct: 181 GEREGGAPQPPPPRG---WRGK---GVRAQQRGGSGGEGASPSPSSSSAGKT-------- 226
Query: 107 RRQPPSPKKSRGRGGRARGEGGLRSALRE 135
P + ++ G G G GG S +E
Sbjct: 227 ---PGTGSRNSGSGVAGGGSGGGGSYWKE 252
>gi|169206171 PREDICTED: hypothetical protein [Homo sapiens]
Length = 466
Score = 35.0 bits (79), Expect = 0.022
Identities = 26/83 (31%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Query: 46 RGRRDGSQAAPGPDRSRHVWWSRTTL-GKRGGNSTGSGGTGAAAGAASSAGTNTYKSMAF 104
R R G A GP R R +RT L G+R + G G A + A S +
Sbjct: 80 RPRDAGEAAVSGPSRQRRTSRARTALWGRRSRRAAGPGLDCAGSAPAPSGAQSCGGPAPA 139
Query: 105 NPRRQPPSPKKSRGRGGRARGEG 127
+ R+P + + G GGRA G
Sbjct: 140 SALRRPLTQWDASGGGGRASHSG 162
>gi|239751791 PREDICTED: hypothetical protein [Homo sapiens]
Length = 650
Score = 35.0 bits (79), Expect = 0.022
Identities = 32/113 (28%), Positives = 42/113 (37%), Gaps = 22/113 (19%)
Query: 50 DGSQAAPGPDRSRHVWWSRTTLGKRG----------GNSTGSGGTGAAAGAASSAGTNTY 99
+G++ PGP SR W L RG + AA +A+SA T
Sbjct: 194 EGARPRPGPTSSRRPWGRAGGLRPRGKRPARGKKRPSSQRRCSSPSAARASATSAPRPTA 253
Query: 100 KSMAFNP------RRQPPSPKKSRG------RGGRARGEGGLRSALREMFLLP 140
S P RR+ P P ++ G G RA GEG S + L P
Sbjct: 254 PSSVAQPSSARSQRRRAPCPHRAGGADGVGSHGARAPGEGSAGSGTERVELGP 306
Score = 28.5 bits (62), Expect = 2.1
Identities = 30/96 (31%), Positives = 37/96 (38%), Gaps = 6/96 (6%)
Query: 52 SQAAPGPDRSRHVWWSRTTLGKRGGNSTGSGGTGAAAGAASSAGTNTYKSMAFNPRRQP- 110
S A P RS+ R R G + G G GA A SAG+ T + + P +P
Sbjct: 256 SVAQPSSARSQR---RRAPCPHRAGGADGVGSHGARAPGEGSAGSGT-ERVELGPHVRPF 311
Query: 111 -PSPKKSRGRGGRARGEGGLRSALREMFLLPGGEGL 145
P S GG R L L + L P GL
Sbjct: 312 FLPPTSSSFFGGPPRLHVPLPPLLLPLLLPPQSTGL 347
Score = 27.7 bits (60), Expect = 3.5
Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 15/68 (22%)
Query: 75 GGNSTGSGGTGAAAGAASS------------AGTNTYKSMAFNPRRQPPSPKKSRGRGGR 122
G + G GG AAGAASS + T+ + R P P SR GR
Sbjct: 152 GVGAGGEGGGEGAAGAASSLSERSSERVELQSDTDDSDTRVAEGARPRPGPTSSRRPWGR 211
Query: 123 ARGEGGLR 130
A GGLR
Sbjct: 212 A---GGLR 216
>gi|239746282 PREDICTED: hypothetical protein XP_002343723 [Homo
sapiens]
Length = 725
Score = 35.0 bits (79), Expect = 0.022
Identities = 32/113 (28%), Positives = 42/113 (37%), Gaps = 22/113 (19%)
Query: 50 DGSQAAPGPDRSRHVWWSRTTLGKRG----------GNSTGSGGTGAAAGAASSAGTNTY 99
+G++ PGP SR W L RG + AA +A+SA T
Sbjct: 194 EGARPRPGPTSSRRPWGRAGGLRPRGKRPARGKKRPSSQRRCSSPSAARASATSAPRPTA 253
Query: 100 KSMAFNP------RRQPPSPKKSRG------RGGRARGEGGLRSALREMFLLP 140
S P RR+ P P ++ G G RA GEG S + L P
Sbjct: 254 PSSVAQPSSARSQRRRAPCPHRAGGADGVGSHGARAPGEGSAGSGTERVELGP 306
Score = 28.5 bits (62), Expect = 2.1
Identities = 30/96 (31%), Positives = 37/96 (38%), Gaps = 6/96 (6%)
Query: 52 SQAAPGPDRSRHVWWSRTTLGKRGGNSTGSGGTGAAAGAASSAGTNTYKSMAFNPRRQP- 110
S A P RS+ R R G + G G GA A SAG+ T + + P +P
Sbjct: 256 SVAQPSSARSQR---RRAPCPHRAGGADGVGSHGARAPGEGSAGSGT-ERVELGPHVRPF 311
Query: 111 -PSPKKSRGRGGRARGEGGLRSALREMFLLPGGEGL 145
P S GG R L L + L P GL
Sbjct: 312 FLPPTSSSFFGGPPRLHVPLPPLLLPLLLPPQSTGL 347
Score = 27.7 bits (60), Expect = 3.5
Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 15/68 (22%)
Query: 75 GGNSTGSGGTGAAAGAASS------------AGTNTYKSMAFNPRRQPPSPKKSRGRGGR 122
G + G GG AAGAASS + T+ + R P P SR GR
Sbjct: 152 GVGAGGEGGGEGAAGAASSLSERSSERVELQSDTDDSDTRVAEGARPRPGPTSSRRPWGR 211
Query: 123 ARGEGGLR 130
A GGLR
Sbjct: 212 A---GGLR 216
>gi|145309302 cell division cycle 2-like 5 isoform 1 [Homo sapiens]
Length = 1512
Score = 35.0 bits (79), Expect = 0.022
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 43 RRLRGRRDGSQAAPGPDRSRHVWWSRTTLGKRGGNSTGSG-GTGAAAGAASSAGTNTYKS 101
RR G+R GS+A+ R H R + K G +S+ G A+A ++SS+ S
Sbjct: 217 RRRDGQRGGSEASKSRSRHSHSGEERAEVAKSGSSSSSGGRRKSASATSSSSSSRKDRDS 276
Query: 102 MAFNPR----RQPPSPKK 115
A R ++PPS K
Sbjct: 277 KAHRSRTKSSKEPPSAYK 294
Score = 28.1 bits (61), Expect = 2.7
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 83 GTGAAAGAASSAGTNTYK-SMAFNPRRQPPSPKKSRGRGGRARG-EGGLRSALREMFLLP 140
GT AAA AA++A ++ + +R +++ GR R RG G + R +F LP
Sbjct: 65 GTAAAAAAAAAASSSCFSPGPPLEVKRLARGKRRAGGRQKRRRGPRAGQEAEKRRVFSLP 124
>gi|145309300 cell division cycle 2-like 5 isoform 2 [Homo sapiens]
Length = 1452
Score = 35.0 bits (79), Expect = 0.022
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 43 RRLRGRRDGSQAAPGPDRSRHVWWSRTTLGKRGGNSTGSG-GTGAAAGAASSAGTNTYKS 101
RR G+R GS+A+ R H R + K G +S+ G A+A ++SS+ S
Sbjct: 217 RRRDGQRGGSEASKSRSRHSHSGEERAEVAKSGSSSSSGGRRKSASATSSSSSSRKDRDS 276
Query: 102 MAFNPR----RQPPSPKK 115
A R ++PPS K
Sbjct: 277 KAHRSRTKSSKEPPSAYK 294
Score = 28.1 bits (61), Expect = 2.7
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 83 GTGAAAGAASSAGTNTYK-SMAFNPRRQPPSPKKSRGRGGRARG-EGGLRSALREMFLLP 140
GT AAA AA++A ++ + +R +++ GR R RG G + R +F LP
Sbjct: 65 GTAAAAAAAAAASSSCFSPGPPLEVKRLARGKRRAGGRQKRRRGPRAGQEAEKRRVFSLP 124
>gi|7710121 engrailed homeobox 2 [Homo sapiens]
Length = 333
Score = 34.3 bits (77), Expect = 0.038
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 10/70 (14%)
Query: 72 GKRGGNSTGSGGTGAAAGAASSAGTNTYKSM----AFNPRRQPP------SPKKSRGRGG 121
G GG G+GG G A+GA G + + + PR+ PP P + G
Sbjct: 91 GAGGGRGGGAGGEGGASGAEGGGGAGGSEQLLGSGSREPRQNPPCAPGAGGPLPAAGSDS 150
Query: 122 RARGEGGLRS 131
GEGG ++
Sbjct: 151 PGDGEGGSKT 160
>gi|4758024 coilin [Homo sapiens]
Length = 576
Score = 34.3 bits (77), Expect = 0.038
Identities = 24/72 (33%), Positives = 29/72 (40%), Gaps = 6/72 (8%)
Query: 56 PGPDRSRHVWWSRTTLGKRGGNSTGSGGTGAAAGAASSAGTNTYKSMAFNPRRQPPSPKK 115
PGP S T G G +GS G G A GA+ S + S K
Sbjct: 353 PGPGLSSQ------TAGAAGWRRSGSNGGGQAPGASPSVSLPASLGRGWGREENLFSWKG 406
Query: 116 SRGRGGRARGEG 127
++GRG R RG G
Sbjct: 407 AKGRGMRGRGRG 418
>gi|26787962 advanced glycosylation end product-specific receptor
isoform 2 precursor [Homo sapiens]
Length = 342
Score = 33.9 bits (76), Expect = 0.049
Identities = 25/79 (31%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Query: 49 RDGSQAAPGPDRSRHVWWSRTTLGK-RGGNSTGSGGTGAAAGAASSAGTNTYKSMAFNPR 107
+D S G R+R + G+ R GNS+ G G + A + A PR
Sbjct: 259 KDVSDLERGAGRTRRGGANCRLCGRIRAGNSSPGPGDPGRPGDSRPAHWGHLVAKAATPR 318
Query: 108 RQPPSPKKSRGRGGRARGE 126
R P+K GRGG R E
Sbjct: 319 RGEEGPRKPGGRGGACRTE 337
>gi|169206489 PREDICTED: hypothetical protein [Homo sapiens]
Length = 564
Score = 33.5 bits (75), Expect = 0.064
Identities = 25/83 (30%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Query: 46 RGRRDGSQAAPGPDRSRHVWWSRTTL-GKRGGNSTGSGGTGAAAGAASSAGTNTYKSMAF 104
R R G A GP R R +RT L G+R + G G A + A S +
Sbjct: 80 RPRDAGEAAVSGPSRQRRTSRARTALWGRRSRRAAGPGLDCAGSAPAPSGAQSCGGPAPA 139
Query: 105 NPRRQPPSPKKSRGRGGRARGEG 127
+ R+P + + G GGR G
Sbjct: 140 SALRRPLTQWDASGGGGRGSHSG 162
>gi|169205942 PREDICTED: hypothetical protein [Homo sapiens]
Length = 564
Score = 33.5 bits (75), Expect = 0.064
Identities = 25/83 (30%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Query: 46 RGRRDGSQAAPGPDRSRHVWWSRTTL-GKRGGNSTGSGGTGAAAGAASSAGTNTYKSMAF 104
R R G A GP R R +RT L G+R + G G A + A S +
Sbjct: 80 RPRDAGEAAVSGPSRQRRTSRARTALWGRRSRRAAGPGLDCAGSAPAPSGAQSCGGPAPA 139
Query: 105 NPRRQPPSPKKSRGRGGRARGEG 127
+ R+P + + G GGR G
Sbjct: 140 SALRRPLTQWDASGGGGRGSHSG 162
>gi|25777645 small conductance calcium-activated potassium channel
protein 2 isoform a [Homo sapiens]
Length = 579
Score = 33.5 bits (75), Expect = 0.064
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 72 GKRGGNSTGSGGTGAAAGAASSAGTNTYK 100
G GG STG GG G +G SS+GT + K
Sbjct: 83 GTGGGGSTGGGGGGGGSGHGSSSGTKSSK 111
>gi|239754620 PREDICTED: hypothetical protein [Homo sapiens]
Length = 551
Score = 33.1 bits (74), Expect = 0.084
Identities = 21/62 (33%), Positives = 26/62 (41%)
Query: 60 RSRHVWWSRTTLGKRGGNSTGSGGTGAAAGAASSAGTNTYKSMAFNPRRQPPSPKKSRGR 119
R R + W G GGT + AA+ A + A PR PPSP S+GR
Sbjct: 362 RVRALLWDAGRGAAAGRGLCALGGTKRGSQAATGAQPSVATWRAVLPRTPPPSPPGSQGR 421
Query: 120 GG 121
G
Sbjct: 422 QG 423
>gi|51702521 POU domain, class 3, transcription factor 2 [Homo
sapiens]
Length = 443
Score = 33.1 bits (74), Expect = 0.084
Identities = 30/116 (25%), Positives = 40/116 (34%), Gaps = 15/116 (12%)
Query: 29 LLREVAEVRHL----GLQRRLRGRRDGSQAAPG----------PDRSRHVWWSRTTLGKR 74
LL A + H G+Q+ G R+ G P H W + + G
Sbjct: 11 LLTSSASIVHAEPPGGMQQGAGGYREAQSLVQGDYGALQSNGHPLSHAHQWITALSHGGG 70
Query: 75 GGNSTGSGGTGAAAGAASSAGTNTYKSMAFNPRRQPPSPKKSRGRGGRARGEGGLR 130
GG G GG G G G+ S P +P + GRG G G L+
Sbjct: 71 GGGG-GGGGGGGGGGGGGGDGSPWSTSPLGQPDIKPSVVVQQGGRGDELHGPGALQ 125
>gi|122937319 even-skipped homeobox 2 [Homo sapiens]
Length = 476
Score = 33.1 bits (74), Expect = 0.084
Identities = 15/39 (38%), Positives = 19/39 (48%)
Query: 71 LGKRGGNSTGSGGTGAAAGAASSAGTNTYKSMAFNPRRQ 109
LG RGG G GG G G A + G + + A PR +
Sbjct: 409 LGSRGGGGGGGGGGGGGGGGAGAGGGSDFGCSAAAPRSE 447
>gi|4507163 SRY (sex determining region Y)-box 4 [Homo sapiens]
Length = 474
Score = 32.7 bits (73), Expect = 0.11
Identities = 22/73 (30%), Positives = 27/73 (36%), Gaps = 11/73 (15%)
Query: 72 GKRGGNSTGSGGTGAAAGAASSAGTNTYKSMAFNPRRQPPSPKKSRGRGGRARGEGGLRS 131
G GG GS G G AS G N+ P+ KKS G GG+
Sbjct: 165 GHGGGGGGGSSNAGGGGGGASGGGANS-----------KPAQKKSCGSKVAGGAGGGVSK 213
Query: 132 ALREMFLLPGGEG 144
++ L GG G
Sbjct: 214 PHAKLILAGGGGG 226
>gi|239751491 PREDICTED: hypothetical protein XP_002347883 [Homo
sapiens]
Length = 333
Score = 32.7 bits (73), Expect = 0.11
Identities = 31/100 (31%), Positives = 37/100 (37%), Gaps = 19/100 (19%)
Query: 44 RLRGRRDGSQAAPGPDRSRHVWWSRTTLGKRGGNSTGSGGTGAAAGAASSAGTNTYKSMA 103
R RG R ++ GP R VW + G GG G A +G
Sbjct: 219 RGRGPRRARRSGRGPRRGPEVW---------PRSEEGPGGLAEVRGGARRSGR------- 262
Query: 104 FNPRRQPPS-PKKSRGRGGRARGEGGLRSALREMFLLPGG 142
PRR P P+ G GG A GG L E+ PGG
Sbjct: 263 -GPRRGPEVWPRSEEGSGGLAEVRGG-PGGLAEVRGGPGG 300
>gi|239745989 PREDICTED: hypothetical protein XP_002344188 [Homo
sapiens]
Length = 296
Score = 32.7 bits (73), Expect = 0.11
Identities = 31/100 (31%), Positives = 37/100 (37%), Gaps = 19/100 (19%)
Query: 44 RLRGRRDGSQAAPGPDRSRHVWWSRTTLGKRGGNSTGSGGTGAAAGAASSAGTNTYKSMA 103
R RG R ++ GP R VW + G GG G A +G
Sbjct: 182 RGRGPRRARRSGRGPRRGPEVW---------PRSEEGPGGLAEVRGGARRSGR------- 225
Query: 104 FNPRRQPPS-PKKSRGRGGRARGEGGLRSALREMFLLPGG 142
PRR P P+ G GG A GG L E+ PGG
Sbjct: 226 -GPRRGPEVWPRSEEGSGGLAEVRGG-PGGLAEVRGGPGG 263
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.138 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,735,620
Number of Sequences: 37866
Number of extensions: 353961
Number of successful extensions: 4045
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 136
Number of HSP's successfully gapped in prelim test: 251
Number of HSP's that attempted gapping in prelim test: 3147
Number of HSP's gapped (non-prelim): 910
length of query: 145
length of database: 18,247,518
effective HSP length: 92
effective length of query: 53
effective length of database: 14,763,846
effective search space: 782483838
effective search space used: 782483838
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.