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Search of human proteins with 239742935
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239742935 PREDICTED: hypothetical protein XP_002342692 [Homo
sapiens]
(189 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239754364 PREDICTED: hypothetical protein [Homo sapiens] 387 e-108
gi|239748911 PREDICTED: hypothetical protein XP_002346854 [Homo ... 387 e-108
gi|239742935 PREDICTED: hypothetical protein XP_002342692 [Homo ... 387 e-108
gi|169167792 PREDICTED: similar to hCG1745223 [Homo sapiens] 40 0.002
gi|88987622 PREDICTED: similar to hCG1745223 [Homo sapiens] 40 0.002
gi|51464815 PREDICTED: similar to hCG1745223 [Homo sapiens] 40 0.002
gi|13994287 BTE-binding protein 4 [Homo sapiens] 39 0.003
gi|239748346 PREDICTED: hypothetical protein XP_002346641 [Homo ... 37 0.010
gi|4504211 guanylate cyclase 1, soluble, alpha 2 [Homo sapiens] 37 0.010
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 37 0.010
gi|239753797 PREDICTED: hypothetical protein [Homo sapiens] 37 0.013
gi|54860079 nadrin isoform 1 [Homo sapiens] 37 0.013
gi|14249534 hypothetical protein LOC84915 [Homo sapiens] 37 0.013
gi|74229025 membralin isoform 1 [Homo sapiens] 36 0.017
gi|153266778 arg tyrosine kinase isoform c [Homo sapiens] 36 0.023
gi|6382062 arg tyrosine kinase isoform b [Homo sapiens] 36 0.023
gi|209862772 arg tyrosine kinase isoform d [Homo sapiens] 36 0.023
gi|153266757 arg tyrosine kinase isoform a [Homo sapiens] 36 0.023
gi|239754508 PREDICTED: hypothetical protein [Homo sapiens] 35 0.029
gi|169211642 PREDICTED: hypothetical protein [Homo sapiens] 35 0.029
gi|169210857 PREDICTED: similar to RIKEN cDNA E130309D14 [Homo s... 35 0.029
gi|239508747 PREDICTED: hypothetical protein [Homo sapiens] 35 0.029
gi|14719400 ADP-ribosylation factor binding protein 3 isoform sh... 35 0.029
gi|20336267 ADP-ribosylation factor binding protein 3 isoform lo... 35 0.029
gi|239749372 PREDICTED: hypothetical protein XP_002347017 [Homo ... 35 0.038
gi|239743509 PREDICTED: hypothetical protein XP_002342878 [Homo ... 35 0.038
gi|167736355 mucin 4 isoform a [Homo sapiens] 35 0.038
gi|5453844 TAF6-like RNA polymerase II [Homo sapiens] 35 0.038
gi|6912492 mitogen-activated protein kinase 8 interacting protei... 35 0.038
gi|7706537 mitogen-activated protein kinase 8 interacting protei... 35 0.038
>gi|239754364 PREDICTED: hypothetical protein [Homo sapiens]
Length = 189
Score = 387 bits (994), Expect = e-108
Identities = 189/189 (100%), Positives = 189/189 (100%)
Query: 1 MRVLGLRGPSEKRGCPTTLLRTRTTQSGTPTPGAASHTPGPLFPVLSTTPAAAGPGPTCG 60
MRVLGLRGPSEKRGCPTTLLRTRTTQSGTPTPGAASHTPGPLFPVLSTTPAAAGPGPTCG
Sbjct: 1 MRVLGLRGPSEKRGCPTTLLRTRTTQSGTPTPGAASHTPGPLFPVLSTTPAAAGPGPTCG 60
Query: 61 EAAAEVGADNGAHRLRFGDAGLNSGSKSRVLFRRRLWKGEPLPPLPPRQGQWPGTARVRA 120
EAAAEVGADNGAHRLRFGDAGLNSGSKSRVLFRRRLWKGEPLPPLPPRQGQWPGTARVRA
Sbjct: 61 EAAAEVGADNGAHRLRFGDAGLNSGSKSRVLFRRRLWKGEPLPPLPPRQGQWPGTARVRA 120
Query: 121 GGAVAGRSTRQSRQGGSSASSGAAPPREAPAAPAVRSSFAPRLRRFCAETRSFLKSKTAP 180
GGAVAGRSTRQSRQGGSSASSGAAPPREAPAAPAVRSSFAPRLRRFCAETRSFLKSKTAP
Sbjct: 121 GGAVAGRSTRQSRQGGSSASSGAAPPREAPAAPAVRSSFAPRLRRFCAETRSFLKSKTAP 180
Query: 181 WGVRLERGS 189
WGVRLERGS
Sbjct: 181 WGVRLERGS 189
>gi|239748911 PREDICTED: hypothetical protein XP_002346854 [Homo
sapiens]
Length = 189
Score = 387 bits (994), Expect = e-108
Identities = 189/189 (100%), Positives = 189/189 (100%)
Query: 1 MRVLGLRGPSEKRGCPTTLLRTRTTQSGTPTPGAASHTPGPLFPVLSTTPAAAGPGPTCG 60
MRVLGLRGPSEKRGCPTTLLRTRTTQSGTPTPGAASHTPGPLFPVLSTTPAAAGPGPTCG
Sbjct: 1 MRVLGLRGPSEKRGCPTTLLRTRTTQSGTPTPGAASHTPGPLFPVLSTTPAAAGPGPTCG 60
Query: 61 EAAAEVGADNGAHRLRFGDAGLNSGSKSRVLFRRRLWKGEPLPPLPPRQGQWPGTARVRA 120
EAAAEVGADNGAHRLRFGDAGLNSGSKSRVLFRRRLWKGEPLPPLPPRQGQWPGTARVRA
Sbjct: 61 EAAAEVGADNGAHRLRFGDAGLNSGSKSRVLFRRRLWKGEPLPPLPPRQGQWPGTARVRA 120
Query: 121 GGAVAGRSTRQSRQGGSSASSGAAPPREAPAAPAVRSSFAPRLRRFCAETRSFLKSKTAP 180
GGAVAGRSTRQSRQGGSSASSGAAPPREAPAAPAVRSSFAPRLRRFCAETRSFLKSKTAP
Sbjct: 121 GGAVAGRSTRQSRQGGSSASSGAAPPREAPAAPAVRSSFAPRLRRFCAETRSFLKSKTAP 180
Query: 181 WGVRLERGS 189
WGVRLERGS
Sbjct: 181 WGVRLERGS 189
>gi|239742935 PREDICTED: hypothetical protein XP_002342692 [Homo
sapiens]
Length = 189
Score = 387 bits (994), Expect = e-108
Identities = 189/189 (100%), Positives = 189/189 (100%)
Query: 1 MRVLGLRGPSEKRGCPTTLLRTRTTQSGTPTPGAASHTPGPLFPVLSTTPAAAGPGPTCG 60
MRVLGLRGPSEKRGCPTTLLRTRTTQSGTPTPGAASHTPGPLFPVLSTTPAAAGPGPTCG
Sbjct: 1 MRVLGLRGPSEKRGCPTTLLRTRTTQSGTPTPGAASHTPGPLFPVLSTTPAAAGPGPTCG 60
Query: 61 EAAAEVGADNGAHRLRFGDAGLNSGSKSRVLFRRRLWKGEPLPPLPPRQGQWPGTARVRA 120
EAAAEVGADNGAHRLRFGDAGLNSGSKSRVLFRRRLWKGEPLPPLPPRQGQWPGTARVRA
Sbjct: 61 EAAAEVGADNGAHRLRFGDAGLNSGSKSRVLFRRRLWKGEPLPPLPPRQGQWPGTARVRA 120
Query: 121 GGAVAGRSTRQSRQGGSSASSGAAPPREAPAAPAVRSSFAPRLRRFCAETRSFLKSKTAP 180
GGAVAGRSTRQSRQGGSSASSGAAPPREAPAAPAVRSSFAPRLRRFCAETRSFLKSKTAP
Sbjct: 121 GGAVAGRSTRQSRQGGSSASSGAAPPREAPAAPAVRSSFAPRLRRFCAETRSFLKSKTAP 180
Query: 181 WGVRLERGS 189
WGVRLERGS
Sbjct: 181 WGVRLERGS 189
>gi|169167792 PREDICTED: similar to hCG1745223 [Homo sapiens]
Length = 320
Score = 39.7 bits (91), Expect = 0.002
Identities = 43/152 (28%), Positives = 54/152 (35%), Gaps = 10/152 (6%)
Query: 15 CPTTLLR-TRTTQSGTPTPGAASHTPGPLFPVLSTTPAAAGPG-PTCGEAAAEVGAD--N 70
CP R RTT P S F V P + PG P A V +
Sbjct: 137 CPRRQRRWLRTTPHPPPPTRQGSREMAGAFLVAPRPPYSRSPGGPESAPTPASVLPELRR 196
Query: 71 GAHRLRFGDAGLNSGSKSRVLFRRRLWKGEPLPPLPPRQGQWPGTARVRAGGAVAGRSTR 130
G L D+GL + + V R +P PL P G P +R RA AG R
Sbjct: 197 GKQDLLSADSGLPAVDQGEVAGPRL----QPAQPLRP--GAVPSASRARAPDTKAGTRAR 250
Query: 131 QSRQGGSSASSGAAPPREAPAAPAVRSSFAPR 162
G S + +P R AP + + PR
Sbjct: 251 DPAPGASQLRAAHSPHRGGGGAPRTQLAAPPR 282
>gi|88987622 PREDICTED: similar to hCG1745223 [Homo sapiens]
Length = 320
Score = 39.7 bits (91), Expect = 0.002
Identities = 43/152 (28%), Positives = 54/152 (35%), Gaps = 10/152 (6%)
Query: 15 CPTTLLR-TRTTQSGTPTPGAASHTPGPLFPVLSTTPAAAGPG-PTCGEAAAEVGAD--N 70
CP R RTT P S F V P + PG P A V +
Sbjct: 137 CPRRQRRWLRTTPHPPPPTRQGSREMAGAFLVAPRPPYSRSPGGPESAPTPASVLPELRR 196
Query: 71 GAHRLRFGDAGLNSGSKSRVLFRRRLWKGEPLPPLPPRQGQWPGTARVRAGGAVAGRSTR 130
G L D+GL + + V R +P PL P G P +R RA AG R
Sbjct: 197 GKQDLLSADSGLPAVDQGEVAGPRL----QPAQPLRP--GAVPSASRARAPDTKAGTRAR 250
Query: 131 QSRQGGSSASSGAAPPREAPAAPAVRSSFAPR 162
G S + +P R AP + + PR
Sbjct: 251 DPAPGASQLRAAHSPHRGGGGAPRTQLAAPPR 282
>gi|51464815 PREDICTED: similar to hCG1745223 [Homo sapiens]
Length = 319
Score = 39.7 bits (91), Expect = 0.002
Identities = 43/152 (28%), Positives = 54/152 (35%), Gaps = 10/152 (6%)
Query: 15 CPTTLLR-TRTTQSGTPTPGAASHTPGPLFPVLSTTPAAAGPG-PTCGEAAAEVGAD--N 70
CP R RTT P S F V P + PG P A V +
Sbjct: 136 CPRRQRRWLRTTPHPPPPTRQGSREMAGAFLVAPRPPYSRSPGGPESAPTPASVLPELRR 195
Query: 71 GAHRLRFGDAGLNSGSKSRVLFRRRLWKGEPLPPLPPRQGQWPGTARVRAGGAVAGRSTR 130
G L D+GL + + V R +P PL P G P +R RA AG R
Sbjct: 196 GKQDLLSADSGLPAVDQGEVAGPRL----QPAQPLRP--GAVPSASRARAPDTKAGTRAR 249
Query: 131 QSRQGGSSASSGAAPPREAPAAPAVRSSFAPR 162
G S + +P R AP + + PR
Sbjct: 250 DPAPGASQLRAAHSPHRGGGGAPRTQLAAPPR 281
>gi|13994287 BTE-binding protein 4 [Homo sapiens]
Length = 252
Score = 38.5 bits (88), Expect = 0.003
Identities = 30/91 (32%), Positives = 36/91 (39%), Gaps = 2/91 (2%)
Query: 73 HRLRFGD--AGLNSGSKSRVLFRRRLWKGEPLPPLPPRQGQWPGTARVRAGGAVAGRSTR 130
HR R G AG +G R R G P PP PP PG A +A
Sbjct: 26 HRGRPGPEGAGPAAGLDVRAARREAASPGTPGPPPPPPAASGPGPGAAAAPHLLAASILA 85
Query: 131 QSRQGGSSASSGAAPPREAPAAPAVRSSFAP 161
R G +A GA+P + AA + S AP
Sbjct: 86 DLRGGPGAAPGGASPASSSSAASSPSSGRAP 116
Score = 28.9 bits (63), Expect = 2.8
Identities = 22/56 (39%), Positives = 26/56 (46%), Gaps = 10/56 (17%)
Query: 9 PSEKRGCPTTLLRTRTTQSGTPTPGAASHTPGPLFPVLSTTPAAAGPGPTCGEAAA 64
P + P L R + +PG TPGP P PAA+GPGP G AAA
Sbjct: 30 PGPEGAGPAAGLDVRAARREAASPG----TPGPPPP----PPAASGPGP--GAAAA 75
>gi|239748346 PREDICTED: hypothetical protein XP_002346641 [Homo
sapiens]
Length = 894
Score = 37.0 bits (84), Expect = 0.010
Identities = 48/172 (27%), Positives = 57/172 (33%), Gaps = 39/172 (22%)
Query: 4 LGLRGPSEKRGCP---TTLLRTRTTQSGTPTPGAASHTPGPLFPVLSTTPAAAGPGPTCG 60
+G P K C +T LR R PG+ H P +P G CG
Sbjct: 38 MGPSSPDVKGSCSVLGSTFLRKR--------PGSCCH------PHPHRSPGRGG----CG 79
Query: 61 EAAAE-VGADNGAHRLRFGDAGLNSGSKSRVLFRRRL--WK------GEPLPPLPPRQGQ 111
V G +R G G ++R F R W G PL PP
Sbjct: 80 SLKQSCVSGPRGMAAVRLGHGLRPPGPRARQRFHRMATGWAVLGSPLGHPLQGCPPSPAA 139
Query: 112 WPGTARVRAGGAVAGRSTRQSRQGGSSASSGAAPPREAPAAPAVRSSFAPRL 163
WP V G V T + R SS S A P R P+ F PRL
Sbjct: 140 WPAPPAVGGGCTV----TLRIRPSESSTGSSAEPSRRRPS-----MFFLPRL 182
>gi|4504211 guanylate cyclase 1, soluble, alpha 2 [Homo sapiens]
Length = 732
Score = 37.0 bits (84), Expect = 0.010
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 10/68 (14%)
Query: 9 PSEKRGCPTTLLRTRTTQSGTPTPGAASHTPGPLFPVLSTTPAAAGPGPTCGEAAAEVGA 68
P E+ CP + R +G+ +P PGPL P + AAA P PT +AA A
Sbjct: 23 PEEEGECPLS----RLCWNGSRSP------PGPLEPSPAAAAAAAAPAPTPAASAAAAAA 72
Query: 69 DNGAHRLR 76
GA R++
Sbjct: 73 TAGARRVQ 80
>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
Length = 2968
Score = 37.0 bits (84), Expect = 0.010
Identities = 47/176 (26%), Positives = 71/176 (40%), Gaps = 26/176 (14%)
Query: 23 RTTQSGTPTPGAASHTPGPLFPVLSTTPAAAGPGPTCGEAAAEVGADNG--AHRLRFG-D 79
+ + +G P PGP + + TP A GP P+ + A ++ + G A +LR +
Sbjct: 1923 KRSPAGLLRPKKGLGEPGP--SLAAPTPGARGPDPSSPDKA-KLAVEKGRKARKLRGPKE 1979
Query: 80 AGLNSG---SKSRVLFRRR-----LWKGEPLPPLPPRQGQWPGTARVRAGGAV-----AG 126
G +G S + RRR L P P T+R GG + AG
Sbjct: 1980 PGFEAGPEASDDDLWTRRRSERIFLHDASAAAPAPVSTAPATKTSRCAKGGPLSPRKDAG 2039
Query: 127 RST-----RQSRQGGSSASSGAAPPREAPAAPAVRSSFAPRLRRFCAETRSFLKSK 177
R+ R+ ++G + PP APA P+ + AP A RS K+K
Sbjct: 2040 RAKDRKDPRKKKKGKEAGPGAGLPPPRAPALPS--EARAPHASSLTAAKRSKAKAK 2093
>gi|239753797 PREDICTED: hypothetical protein [Homo sapiens]
Length = 864
Score = 36.6 bits (83), Expect = 0.013
Identities = 48/172 (27%), Positives = 57/172 (33%), Gaps = 39/172 (22%)
Query: 4 LGLRGPSEKRGCP---TTLLRTRTTQSGTPTPGAASHTPGPLFPVLSTTPAAAGPGPTCG 60
+G P K C +T LR R PG+ H P +P G CG
Sbjct: 38 MGPSSPDVKGSCSVLGSTFLRKR--------PGSCCH------PHPHRSPGRGG----CG 79
Query: 61 EAAAE-VGADNGAHRLRFGDAGLNSGSKSRVLFRRRL--WK------GEPLPPLPPRQGQ 111
V G +R G G ++R F R W G PL PP
Sbjct: 80 SLKQSCVSGPRGMAAVRLGHGLRPPGPRARQRFHRMATGWAVLGSPLGHPLRGCPPSPAA 139
Query: 112 WPGTARVRAGGAVAGRSTRQSRQGGSSASSGAAPPREAPAAPAVRSSFAPRL 163
WP V G V T + R SS S A P R P+ F PRL
Sbjct: 140 WPAPPAVGGGCTV----TLRIRPSESSTGSSAEPSRRRPS-----MFFLPRL 182
>gi|54860079 nadrin isoform 1 [Homo sapiens]
Length = 881
Score = 36.6 bits (83), Expect = 0.013
Identities = 36/134 (26%), Positives = 46/134 (34%), Gaps = 18/134 (13%)
Query: 30 PTPGAASHTPGPLFPVLSTTPAAAGPGPTCGEAAAEVGADNGAHRLRFGDAGLNSGSKSR 89
P+PG S P P PV + PA + A G+H+L G N+ S
Sbjct: 569 PSPGDGS-PPKPKDPVSAAVPAPGRNNSQIASGQNQPQAAAGSHQLSMGQPH-NAAGPSP 626
Query: 90 VLFRRRLWKGEPLPPLPPRQGQWPGTARVRAGGAVAGRSTRQSRQGGSS--ASSGAAPPR 147
RR + K P PP P G G QS G S S PP
Sbjct: 627 HTLRRAVKKPAPAPPKP--------------GNPPPGHPGGQSSSGTSQHPPSLSPKPPT 672
Query: 148 EAPAAPAVRSSFAP 161
+P+ P + P
Sbjct: 673 RSPSPPTQHTGQPP 686
>gi|14249534 hypothetical protein LOC84915 [Homo sapiens]
Length = 452
Score = 36.6 bits (83), Expect = 0.013
Identities = 35/123 (28%), Positives = 50/123 (40%), Gaps = 18/123 (14%)
Query: 30 PTPGAASHTPGPLFPVLSTTPAAAGP----GPTCGEAAAEVGADNGAHR-LRFGDAGLNS 84
P P A H P P FP ++ + AA P G G+ A + GA + + D+GL+
Sbjct: 226 PHPSPAKHGPVPSFPSMAYSAAAGLPDCRKGTELGQGATQALTLAGAAKPAGYADSGLD- 284
Query: 85 GSKSRVLFRRRLWKGEPLPPLP-PRQGQWPGTARVRAGGAVAGRSTRQSRQGGSSASSGA 143
LW +P PP P P + T ++ A GR+ R GS + G
Sbjct: 285 ---------YLLWPQKPPPPPPQPLRAYSGSTVASKSPEACGGRA--YERASGSPLNCGV 333
Query: 144 APP 146
P
Sbjct: 334 GLP 336
>gi|74229025 membralin isoform 1 [Homo sapiens]
Length = 620
Score = 36.2 bits (82), Expect = 0.017
Identities = 46/160 (28%), Positives = 60/160 (37%), Gaps = 22/160 (13%)
Query: 6 LRGPSEKRGCPTTLLRTRTTQSGTPT--PGAASHTP--GPLFPVLSTTPAAAGPGPT--- 58
L+ P G PT L SG P P +A P GP+ P S +P P+
Sbjct: 465 LQAPPLGPGTPTALPDDMNNNSGAPATAPDSAGQPPALGPVSPGASGSPGPVAAAPSSLV 524
Query: 59 --CGEAAAEVGADNG---AHRLRFGDAGLNSGSKSRVLFRRRLWKGEPLPPLPPRQG--Q 111
AA G D G DA SG + +L RR P PL P G
Sbjct: 525 AAAASVAAAAGGDLGWMAETAAIITDASFLSGLSASLLERR------PASPLGPAGGLPH 578
Query: 112 WPGTARVRAGGAVAGRSTRQSRQGGSSASSGAAPPREAPA 151
P + + A + + + GG S +S A P EAP+
Sbjct: 579 APQDSVPPSDSAASDTTPLGAAVGGPSPASMA--PTEAPS 616
>gi|153266778 arg tyrosine kinase isoform c [Homo sapiens]
Length = 1167
Score = 35.8 bits (81), Expect = 0.023
Identities = 46/160 (28%), Positives = 60/160 (37%), Gaps = 23/160 (14%)
Query: 23 RTTQSGTPTPGAASHTPGPL--FPVLSTTPAAAGP---GPTCGEAAAEV---GADNGAHR 74
R +G P G P P PVL TT P PT A+V G D+ ++
Sbjct: 883 RLGMAGVPEDGEQPGWPSPAKAAPVLPTTHNHKVPVLISPTLKHTPADVQLIGTDSQGNK 942
Query: 75 LRFGDAG--LNSGSKSRVLFRRRLWKGEPLPPLPPRQGQWPGTAR---VRAGGAVAGRST 129
+ +SG K R RR K P PP R Q P AG+ST
Sbjct: 943 FKLLSEHQVTSSGDKDRP--RRVKPKCAPPPPPVMRLLQHPSICSDPTEEPTALTAGQST 1000
Query: 130 RQSRQGGSSASSGAA--------PPREAPAAPAVRSSFAP 161
++++GG A+ GA P P P SS +P
Sbjct: 1001 SETQEGGKKAALGAVPISGKAGRPVMPPPQVPLPTSSISP 1040
>gi|6382062 arg tyrosine kinase isoform b [Homo sapiens]
Length = 1182
Score = 35.8 bits (81), Expect = 0.023
Identities = 46/160 (28%), Positives = 60/160 (37%), Gaps = 23/160 (14%)
Query: 23 RTTQSGTPTPGAASHTPGPL--FPVLSTTPAAAGP---GPTCGEAAAEV---GADNGAHR 74
R +G P G P P PVL TT P PT A+V G D+ ++
Sbjct: 898 RLGMAGVPEDGEQPGWPSPAKAAPVLPTTHNHKVPVLISPTLKHTPADVQLIGTDSQGNK 957
Query: 75 LRFGDAG--LNSGSKSRVLFRRRLWKGEPLPPLPPRQGQWPGTAR---VRAGGAVAGRST 129
+ +SG K R RR K P PP R Q P AG+ST
Sbjct: 958 FKLLSEHQVTSSGDKDRP--RRVKPKCAPPPPPVMRLLQHPSICSDPTEEPTALTAGQST 1015
Query: 130 RQSRQGGSSASSGAA--------PPREAPAAPAVRSSFAP 161
++++GG A+ GA P P P SS +P
Sbjct: 1016 SETQEGGKKAALGAVPISGKAGRPVMPPPQVPLPTSSISP 1055
>gi|209862772 arg tyrosine kinase isoform d [Homo sapiens]
Length = 1064
Score = 35.8 bits (81), Expect = 0.023
Identities = 46/160 (28%), Positives = 60/160 (37%), Gaps = 23/160 (14%)
Query: 23 RTTQSGTPTPGAASHTPGPL--FPVLSTTPAAAGP---GPTCGEAAAEV---GADNGAHR 74
R +G P G P P PVL TT P PT A+V G D+ ++
Sbjct: 780 RLGMAGVPEDGEQPGWPSPAKAAPVLPTTHNHKVPVLISPTLKHTPADVQLIGTDSQGNK 839
Query: 75 LRFGDAG--LNSGSKSRVLFRRRLWKGEPLPPLPPRQGQWPGTAR---VRAGGAVAGRST 129
+ +SG K R RR K P PP R Q P AG+ST
Sbjct: 840 FKLLSEHQVTSSGDKDRP--RRVKPKCAPPPPPVMRLLQHPSICSDPTEEPTALTAGQST 897
Query: 130 RQSRQGGSSASSGAA--------PPREAPAAPAVRSSFAP 161
++++GG A+ GA P P P SS +P
Sbjct: 898 SETQEGGKKAALGAVPISGKAGRPVMPPPQVPLPTSSISP 937
>gi|153266757 arg tyrosine kinase isoform a [Homo sapiens]
Length = 1146
Score = 35.8 bits (81), Expect = 0.023
Identities = 46/160 (28%), Positives = 60/160 (37%), Gaps = 23/160 (14%)
Query: 23 RTTQSGTPTPGAASHTPGPL--FPVLSTTPAAAGP---GPTCGEAAAEV---GADNGAHR 74
R +G P G P P PVL TT P PT A+V G D+ ++
Sbjct: 862 RLGMAGVPEDGEQPGWPSPAKAAPVLPTTHNHKVPVLISPTLKHTPADVQLIGTDSQGNK 921
Query: 75 LRFGDAG--LNSGSKSRVLFRRRLWKGEPLPPLPPRQGQWPGTAR---VRAGGAVAGRST 129
+ +SG K R RR K P PP R Q P AG+ST
Sbjct: 922 FKLLSEHQVTSSGDKDRP--RRVKPKCAPPPPPVMRLLQHPSICSDPTEEPTALTAGQST 979
Query: 130 RQSRQGGSSASSGAA--------PPREAPAAPAVRSSFAP 161
++++GG A+ GA P P P SS +P
Sbjct: 980 SETQEGGKKAALGAVPISGKAGRPVMPPPQVPLPTSSISP 1019
>gi|239754508 PREDICTED: hypothetical protein [Homo sapiens]
Length = 308
Score = 35.4 bits (80), Expect = 0.029
Identities = 55/201 (27%), Positives = 67/201 (33%), Gaps = 44/201 (21%)
Query: 21 RTRTTQSGTPT--PGAASHTPGPLFPVLSTTPAAAGPGPTCGEAAAEVGADNGAHRLR-- 76
R T++G P G A H G S PAAA PG A+A NG RLR
Sbjct: 117 RAHGTEAGGPAFPRGRAVHYVGQ---GASAPPAAAAPG-----ASACSRRRNGGRRLRQA 168
Query: 77 -----------FGDAGLNSGSKSRVLFRRRLWKGEPLPPLPPRQGQWPGTARVRAGGAVA 125
G + SG+ S + + P PP P R + P AR R +
Sbjct: 169 SYLHSPAVIFICGGNEVVSGAPS--VAEPDIQIALPAPPAPARWSREPQAARARTASPLC 226
Query: 126 GRSTRQSRQGGSSASSGAAP-----------PREAPAAPAVRSSFAPRLRRFCAETRSFL 174
+ R S + +P PR P VR P R TR
Sbjct: 227 PATARASSSSPAPLFPSPSPFPPLLCRARLSPRNQPPC-RVRLPGIPHAARVTVNTRQSR 285
Query: 175 KSKTAP-------WGVRLERG 188
KSK A W L RG
Sbjct: 286 KSKKAANQRDFSIWKTGLRRG 306
>gi|169211642 PREDICTED: hypothetical protein [Homo sapiens]
Length = 378
Score = 35.4 bits (80), Expect = 0.029
Identities = 32/133 (24%), Positives = 44/133 (33%), Gaps = 2/133 (1%)
Query: 20 LRTRTTQSGTPTPGAASHTPGPLFPVLSTTPAAAGPGPTCGEAAAEVGAD--NGAHRLRF 77
L+ Q P P A+ PGP P PA GP G A V D G R
Sbjct: 241 LQAAAAQRPQPAPAASPGAPGPSRPAARAQPAQRARGPGVGARLAGVTRDGRGGPARDAA 300
Query: 78 GDAGLNSGSKSRVLFRRRLWKGEPLPPLPPRQGQWPGTARVRAGGAVAGRSTRQSRQGGS 137
GS+ R+ + P PP P + + +A + R + + G
Sbjct: 301 RSPQAGPGSEGSRPSSRKRGEAAPAPPKSPNRQPFVLPDVSKASSPLLAREFLRGAERGH 360
Query: 138 SASSGAAPPREAP 150
+P R P
Sbjct: 361 LLYREDSPSRSWP 373
>gi|169210857 PREDICTED: similar to RIKEN cDNA E130309D14 [Homo
sapiens]
Length = 378
Score = 35.4 bits (80), Expect = 0.029
Identities = 32/133 (24%), Positives = 44/133 (33%), Gaps = 2/133 (1%)
Query: 20 LRTRTTQSGTPTPGAASHTPGPLFPVLSTTPAAAGPGPTCGEAAAEVGAD--NGAHRLRF 77
L+ Q P P A+ PGP P PA GP G A V D G R
Sbjct: 241 LQAAAAQRPQPAPAASPGAPGPSRPAARAQPAQRARGPGVGARLAGVTRDGRGGPARDAA 300
Query: 78 GDAGLNSGSKSRVLFRRRLWKGEPLPPLPPRQGQWPGTARVRAGGAVAGRSTRQSRQGGS 137
GS+ R+ + P PP P + + +A + R + + G
Sbjct: 301 RSPQAGPGSEGSRPSSRKRGEAAPAPPKSPNRQPFVLPDVSKASSPLLAREFLRGAERGH 360
Query: 138 SASSGAAPPREAP 150
+P R P
Sbjct: 361 LLYREDSPSRSWP 373
>gi|239508747 PREDICTED: hypothetical protein [Homo sapiens]
Length = 308
Score = 35.4 bits (80), Expect = 0.029
Identities = 55/201 (27%), Positives = 67/201 (33%), Gaps = 44/201 (21%)
Query: 21 RTRTTQSGTPT--PGAASHTPGPLFPVLSTTPAAAGPGPTCGEAAAEVGADNGAHRLR-- 76
R T++G P G A H G S PAAA PG A+A NG RLR
Sbjct: 117 RAHGTEAGGPAFPRGRAVHYVGQ---GASAPPAAAAPG-----ASACSRRRNGGRRLRQA 168
Query: 77 -----------FGDAGLNSGSKSRVLFRRRLWKGEPLPPLPPRQGQWPGTARVRAGGAVA 125
G + SG+ S + + P PP P R + P AR R +
Sbjct: 169 SYLHSPAVIFICGGNEVVSGAPS--VAEPDIQIALPAPPAPARWSREPQAARARTASPLC 226
Query: 126 GRSTRQSRQGGSSASSGAAP-----------PREAPAAPAVRSSFAPRLRRFCAETRSFL 174
+ R S + +P PR P VR P R TR
Sbjct: 227 PATARASSSSPAPLFPSPSPFPPLLCRARLSPRNQPPC-RVRLPGIPHAARVTVNTRQSR 285
Query: 175 KSKTAP-------WGVRLERG 188
KSK A W L RG
Sbjct: 286 KSKKAANQRDFSIWKTGLRRG 306
>gi|14719400 ADP-ribosylation factor binding protein 3 isoform short
[Homo sapiens]
Length = 690
Score = 35.4 bits (80), Expect = 0.029
Identities = 42/164 (25%), Positives = 60/164 (36%), Gaps = 36/164 (21%)
Query: 13 RGCPTTLLRTRTTQSGTPTPGAASHTPGPLFPVLSTTPAAAGP--GPTCGEAAAEVGADN 70
+G L TT S + A P P+L P A+GP + +A A +G +
Sbjct: 290 QGTLIDLAELDTTNSLSSVLAPAPTPPSSGIPILPPPPQASGPPRSRSSSQAEATLGPSS 349
Query: 71 GAHRLRFGDAGLNSGSKSRVLFRRRLWKGEPLPPLPPRQ----GQW-------------- 112
++ L + D L L +P P +PP++ QW
Sbjct: 350 TSNALSWLDEELLC-----------LGLADPAPNVPPKESAGNSQWHLLQREQSDLDFFS 398
Query: 113 --PGTARVRAGGAVAGRSTRQSRQGGSSASSGAAPPREAPAAPA 154
PGTA A GA + S SS+ + PP AP PA
Sbjct: 399 PRPGTA---ACGASDAPLLQPSAPSSSSSQAPLPPPFPAPVVPA 439
>gi|20336267 ADP-ribosylation factor binding protein 3 isoform long
[Homo sapiens]
Length = 723
Score = 35.4 bits (80), Expect = 0.029
Identities = 42/164 (25%), Positives = 60/164 (36%), Gaps = 36/164 (21%)
Query: 13 RGCPTTLLRTRTTQSGTPTPGAASHTPGPLFPVLSTTPAAAGP--GPTCGEAAAEVGADN 70
+G L TT S + A P P+L P A+GP + +A A +G +
Sbjct: 323 QGTLIDLAELDTTNSLSSVLAPAPTPPSSGIPILPPPPQASGPPRSRSSSQAEATLGPSS 382
Query: 71 GAHRLRFGDAGLNSGSKSRVLFRRRLWKGEPLPPLPPRQ----GQW-------------- 112
++ L + D L L +P P +PP++ QW
Sbjct: 383 TSNALSWLDEELLC-----------LGLADPAPNVPPKESAGNSQWHLLQREQSDLDFFS 431
Query: 113 --PGTARVRAGGAVAGRSTRQSRQGGSSASSGAAPPREAPAAPA 154
PGTA A GA + S SS+ + PP AP PA
Sbjct: 432 PRPGTA---ACGASDAPLLQPSAPSSSSSQAPLPPPFPAPVVPA 472
>gi|239749372 PREDICTED: hypothetical protein XP_002347017 [Homo
sapiens]
Length = 212
Score = 35.0 bits (79), Expect = 0.038
Identities = 40/127 (31%), Positives = 57/127 (44%), Gaps = 9/127 (7%)
Query: 26 QSGTPTPGAASHTPGPLFPVLSTTPAAAGPGPTCGEAAAEVGADNG-AHRLRFGDA-GLN 83
++ TP P +A P P P L ++ G C A A A +LR G A N
Sbjct: 75 RAATPAPPSA---PAPARPSLRLGSSSLTGGACCATAQLTAAARRTKATQLRPGIALAAN 131
Query: 84 SGSKSRVLFRR-RLWKGEPLPPLPPRQGQWPGTARVRA-GGAVAGRSTRQSRQGGSSASS 141
+ ++ ++ RL +G+ PP PPR PGTA +A GG + G T + +G S
Sbjct: 132 ATPRTPAEAKKSRLGRGQATPP-PPRD-PRPGTAPFQAVGGTLGGGGTGRRGRGFSVPRK 189
Query: 142 GAAPPRE 148
G RE
Sbjct: 190 GWRRERE 196
>gi|239743509 PREDICTED: hypothetical protein XP_002342878 [Homo
sapiens]
Length = 212
Score = 35.0 bits (79), Expect = 0.038
Identities = 40/127 (31%), Positives = 57/127 (44%), Gaps = 9/127 (7%)
Query: 26 QSGTPTPGAASHTPGPLFPVLSTTPAAAGPGPTCGEAAAEVGADNG-AHRLRFGDA-GLN 83
++ TP P +A P P P L ++ G C A A A +LR G A N
Sbjct: 75 RAATPAPPSA---PAPARPSLRLGSSSLTGGACCATAQLTAAARRTKATQLRPGIALAAN 131
Query: 84 SGSKSRVLFRR-RLWKGEPLPPLPPRQGQWPGTARVRA-GGAVAGRSTRQSRQGGSSASS 141
+ ++ ++ RL +G+ PP PPR PGTA +A GG + G T + +G S
Sbjct: 132 ATPRTPAEAKKSRLGRGQATPP-PPRD-PRPGTAPFQAVGGTLGGGGTGRRGRGFSVPRK 189
Query: 142 GAAPPRE 148
G RE
Sbjct: 190 GWRRERE 196
>gi|167736355 mucin 4 isoform a [Homo sapiens]
Length = 5284
Score = 35.0 bits (79), Expect = 0.038
Identities = 42/165 (25%), Positives = 64/165 (38%), Gaps = 27/165 (16%)
Query: 16 PTTLLRTRTTQSGTP--------TPG----AASHTPGPLFPVLSTT--------PAAAGP 55
P T ++TT+S +P TPG A+ H+P + P + T PA G
Sbjct: 643 PQTTQESQTTRSVSPMTDTKTVTTPGSSFTASGHSPSEIVPQDAPTISAATTFAPAPTGD 702
Query: 56 GPTCGEAAAEVGADNGAHRLRFGDAGLNSGSKSRVLFRRRLWKGEPLPPLPPRQGQWPGT 115
G T + A +H G +G S SK+ L P P +GQW
Sbjct: 703 GHTTQAPTTALQAAPSSHDATLGPSGGTSLSKTGALTLANSVVSTPGGP----EGQWTSA 758
Query: 116 ARVRAGGAVAGRSTRQSRQGGSSASSGAAPPREAPAAPAVRSSFA 160
+ + A + + Q S+ +SG E PA+ R++ A
Sbjct: 759 SASTSPDTAAAMT--HTHQAESTEASGQTQTSE-PASSGSRTTSA 800
Score = 28.5 bits (62), Expect = 3.6
Identities = 39/160 (24%), Positives = 56/160 (35%), Gaps = 12/160 (7%)
Query: 16 PTTLLRTRTTQSGTPTP--GAASHTPGPLFPVLSTTPAAAGPGPTCGEAAAEVGADNGAH 73
P T L + +T TP P +S + G P+L T ++A G + + + AH
Sbjct: 1714 PVTSLSSVSTGDTTPLPVTSPSSASTGHASPLLVTDASSASTGQATPLPVTDTSSVSTAH 1773
Query: 74 RLRFGDAGLNSGSKSRV-------LFRRRLWKGEPLPPLPPRQGQWPGTARV---RAGGA 123
GL+S S + + PLP P T + A A
Sbjct: 1774 ATPLPVTGLSSASTDDTTRLPVTDVSSASTGQAIPLPVTSPSSASTGDTTPLPVTDASSA 1833
Query: 124 VAGRSTRQSRQGGSSASSGAAPPREAPAAPAVRSSFAPRL 163
G +T SSASSG A +V + A L
Sbjct: 1834 STGDTTSLPVTIPSSASSGHTTSLPVTDASSVSTGHATSL 1873
Score = 28.5 bits (62), Expect = 3.6
Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 6/83 (7%)
Query: 10 SEKRGCPTTLLRTRTTQ--SGTPTP----GAASHTPGPLFPVLSTTPAAAGPGPTCGEAA 63
S G T LL T T+ +G TP A+S + G P+ T+P++A G T
Sbjct: 3160 SSSTGDTTPLLVTETSSVSTGHATPLLVTDASSASTGHATPLHVTSPSSASTGDTTPVPV 3219
Query: 64 AEVGADNGAHRLRFGDAGLNSGS 86
+ + + H GL+S S
Sbjct: 3220 TDTSSVSTGHATPLPVTGLSSAS 3242
Score = 27.7 bits (60), Expect = 6.1
Identities = 37/160 (23%), Positives = 52/160 (32%), Gaps = 12/160 (7%)
Query: 16 PTTLLRTRTTQSGTPTP--GAASHTPGPLFPVLSTTPAAAGPGPTCGEAAAEVGADNGAH 73
P T L + +T TP P A+S + G P+ T P++ G T + + H
Sbjct: 3682 PVTSLSSVSTGDTTPLPVTDASSASTGHATPLPVTIPSSVSTGDTMPLPVTSPSSASTGH 3741
Query: 74 RLRFGDAGLNSGSKSRV-------LFRRRLWKGEPLPPLPPRQGQWPGTARV---RAGGA 123
GL+S S PLP T R+ A
Sbjct: 3742 ATPLPVTGLSSASTGDTTPLPVTDTSSASTRHATPLPVTDTSSASTDDTTRLPVTDVSSA 3801
Query: 124 VAGRSTRQSRQGGSSASSGAAPPREAPAAPAVRSSFAPRL 163
G +T SSAS+G P +V + A L
Sbjct: 3802 STGHATPLPVTSTSSASTGDTTPLPVTDTSSVSTGHATSL 3841
>gi|5453844 TAF6-like RNA polymerase II [Homo sapiens]
Length = 622
Score = 35.0 bits (79), Expect = 0.038
Identities = 54/198 (27%), Positives = 73/198 (36%), Gaps = 44/198 (22%)
Query: 7 RGPSEKRGCPT-------TLLRTRTTQSGTPTPGAASHTPGPLFPVLSTTPAAAGP-GPT 58
RG RGC +LL ++ G P S P P P AGP P+
Sbjct: 381 RGGPGGRGCRRLDDLPWDSLLFQESSSGGGAEPSFGSGLPLP--------PGGAGPEDPS 432
Query: 59 CGEAAAEVGADNGAHRLRFGDAGLNSGSKSRVLFRRRLWKGEPLP--PLPPRQGQWPGTA 116
A++ + A FGD+ R G+P P P PP + P A
Sbjct: 433 LSVTLADIYRELYAF---FGDS-----------LATRFGTGQPAPTAPRPPGDKKEPAAA 478
Query: 117 --------RVRAGGAVA---GRSTRQSRQGGSSASSGAAPPREAPAAPAVRSSFAPRLRR 165
++ A V+ S R S GG +++SG A P R+ APR +
Sbjct: 479 PDSVRKMPQLTASAIVSPHGDESPRGSGGGGPASASGPAASESRPLPRVHRARGAPRQQG 538
Query: 166 FCAETRS-FLKSKTAPWG 182
TR F KS+ AP G
Sbjct: 539 PGTGTRDVFQKSRFAPRG 556
>gi|6912492 mitogen-activated protein kinase 8 interacting protein 2
isoform 1 [Homo sapiens]
Length = 824
Score = 35.0 bits (79), Expect = 0.038
Identities = 43/149 (28%), Positives = 55/149 (36%), Gaps = 26/149 (17%)
Query: 29 TPTPGAASHTPGPLFPVLSTTPAAAG----PGPTC-GEAAAEVGADNGAHRLRFGDAGLN 83
+P P A PGPL P T P A PG C G AE A G D G+
Sbjct: 173 SPAPEALRELPGPL-PATDTGPGGAQSPVRPGCDCEGNRPAEPPAPGGTSPS--SDPGIE 229
Query: 84 SGSKSRVLFRRRLWKGEPLPPLPPRQGQWPGTARVR----------------AGGAVAGR 127
+ +SR R + P + G AR+ G + +GR
Sbjct: 230 ADLRSRSSGGRGGRRSSQELSSPGSDSEDAGGARLGRMISSISETELELSSDGGSSSSGR 289
Query: 128 STR--QSRQGGSSASSGAAPPREAPAAPA 154
S+ S + SS +S PPRE P PA
Sbjct: 290 SSHLTNSIEEASSPASEPEPPREPPRRPA 318
>gi|7706537 mitogen-activated protein kinase 8 interacting protein 2
isoform 2 [Homo sapiens]
Length = 797
Score = 35.0 bits (79), Expect = 0.038
Identities = 43/149 (28%), Positives = 55/149 (36%), Gaps = 26/149 (17%)
Query: 29 TPTPGAASHTPGPLFPVLSTTPAAAG----PGPTC-GEAAAEVGADNGAHRLRFGDAGLN 83
+P P A PGPL P T P A PG C G AE A G D G+
Sbjct: 146 SPAPEALRELPGPL-PATDTGPGGAQSPVRPGCDCEGNRPAEPPAPGGTSPS--SDPGIE 202
Query: 84 SGSKSRVLFRRRLWKGEPLPPLPPRQGQWPGTARVR----------------AGGAVAGR 127
+ +SR R + P + G AR+ G + +GR
Sbjct: 203 ADLRSRSSGGRGGRRSSQELSSPGSDSEDAGGARLGRMISSISETELELSSDGGSSSSGR 262
Query: 128 STR--QSRQGGSSASSGAAPPREAPAAPA 154
S+ S + SS +S PPRE P PA
Sbjct: 263 SSHLTNSIEEASSPASEPEPPREPPRRPA 291
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.132 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,502,085
Number of Sequences: 37866
Number of extensions: 556743
Number of successful extensions: 5572
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 96
Number of HSP's successfully gapped in prelim test: 424
Number of HSP's that attempted gapping in prelim test: 4829
Number of HSP's gapped (non-prelim): 1121
length of query: 189
length of database: 18,247,518
effective HSP length: 96
effective length of query: 93
effective length of database: 14,612,382
effective search space: 1358951526
effective search space used: 1358951526
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.