Guide to the Human Genome
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Name: TMEM99 Sequence: fasta or formatted (258aa) NCBI GI: 116268113
Description:

transmembrane protein 99

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         16           2
 C cysteine            5.4         14           2
 D aspartate           1.2          3           1
 E glutamate           3.1          8           1
 F phenylalanine       5.8         15           1
 G glycine             7.8         20           2
 H histidine           3.9         10           1
 I isoleucine          3.5          9           1
 K lysine              1.2          3           1
 L leucine            16.3         42           3
 M methionine          0.4          1           1
 N asparagine          1.9          5           2
 P proline             5.8         15           1
 Q glutamine           4.7         12           2
 R arginine            1.9          5           1
 S serine             13.2         34           2
 T threonine           3.9         10           1
 V valine              8.5         22           1
 W tryptophan          3.5          9           1
 Y tyrosine            1.9          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transmembrane protein 99 
LOC100293936          0.043   PREDICTED: hypothetical protein 
LOC100287915          0.043   PREDICTED: hypothetical protein XP_002343907 
LOC100287882          0.043   PREDICTED: hypothetical protein XP_002343906 
PIK3C3                0.014   catalytic phosphatidylinositol 3-kinase 3 
C20orf54              0.014   hypothetical protein LOC113278 
F8A1                  0.012   coagulation factor VIII-associated protein 
F8A3                  0.012   coagulation factor VIII-associated (intronic transcr...
F8A2                  0.012   coagulation factor VIII-associated (intronic transcr...
JAK2                  0.010   Janus kinase 2 
C12orf49              0.008   hypothetical protein LOC79794 
ZNF35                 0.006   zinc finger protein 35 
SCO2                  0.006   cytochrome oxidase deficient homolog 2 
KIAA1549              0.006   hypothetical protein LOC57670 
ZNF256                0.006   zinc finger protein 256 
ZNF696                0.006   zinc finger protein 696 
C11orf9               0.006   hypothetical protein LOC745 isoform 1 
C11orf9               0.006   hypothetical protein LOC745 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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