Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 116268111
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|116268111 short chain dehydrogenase/reductase family 42E,
member 1 [Homo sapiens]
(393 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|116268111 short chain dehydrogenase/reductase family 42E, mem... 799 0.0
gi|239745448 PREDICTED: hypothetical protein XP_002343493 [Homo ... 347 1e-95
gi|239756515 PREDICTED: similar to Putative 3-beta-HSD family pr... 346 2e-95
gi|239751020 PREDICTED: hypothetical protein XP_002347673 [Homo ... 346 2e-95
gi|193211614 NAD(P) dependent steroid dehydrogenase-like [Homo s... 174 2e-43
gi|8393516 NAD(P) dependent steroid dehydrogenase-like [Homo sap... 174 2e-43
gi|4504509 3 beta-hydroxysteroid dehydrogenase 2 [Homo sapiens] 128 8e-30
gi|19923621 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and s... 123 3e-28
gi|4504507 3 beta-hydroxysteroid dehydrogenase 1 [Homo sapiens] 122 6e-28
gi|218563686 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and ... 69 7e-12
gi|218563684 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and ... 69 7e-12
gi|7657641 TDP-glucose 4,6-dehydratase [Homo sapiens] 61 2e-09
gi|56118217 UDP-galactose-4-epimerase [Homo sapiens] 47 4e-05
gi|56237023 UDP-galactose-4-epimerase [Homo sapiens] 47 4e-05
gi|189083684 UDP-galactose-4-epimerase [Homo sapiens] 47 4e-05
gi|42516563 UDP-glucuronate decarboxylase 1 [Homo sapiens] 33 0.34
gi|46852147 mitochondrial isoleucine tRNA synthetase [Homo sapiens] 29 6.4
gi|154813204 inhibin beta B subunit preproprotein [Homo sapiens] 29 6.4
gi|41393563 kinesin family member 1B isoform b [Homo sapiens] 29 6.4
gi|33519455 methionine adenosyltransferase II, beta isoform 2 [H... 29 6.4
gi|11034825 methionine adenosyltransferase II, beta isoform 1 [H... 29 6.4
gi|72384365 zinc finger protein 816A [Homo sapiens] 29 8.4
>gi|116268111 short chain dehydrogenase/reductase family 42E, member
1 [Homo sapiens]
Length = 393
Score = 799 bits (2064), Expect = 0.0
Identities = 393/393 (100%), Positives = 393/393 (100%)
Query: 1 MDPKRSQKESVLITGGSGYFGFRLGCALNQNGVHVILFDISSPAQTIPEGIKFIQGDIRH 60
MDPKRSQKESVLITGGSGYFGFRLGCALNQNGVHVILFDISSPAQTIPEGIKFIQGDIRH
Sbjct: 1 MDPKRSQKESVLITGGSGYFGFRLGCALNQNGVHVILFDISSPAQTIPEGIKFIQGDIRH 60
Query: 61 LSDVEKAFQDADVTCVFHIASYGMSGREQLNRNLIKEVNVRGTDNILQVCQRRRVPRLVY 120
LSDVEKAFQDADVTCVFHIASYGMSGREQLNRNLIKEVNVRGTDNILQVCQRRRVPRLVY
Sbjct: 61 LSDVEKAFQDADVTCVFHIASYGMSGREQLNRNLIKEVNVRGTDNILQVCQRRRVPRLVY 120
Query: 121 TSTFNVIFGGQVIRNGDESLPYLPLHLHPDHYSRTKSIAEQKVLEANATPLDRGDGVLRT 180
TSTFNVIFGGQVIRNGDESLPYLPLHLHPDHYSRTKSIAEQKVLEANATPLDRGDGVLRT
Sbjct: 121 TSTFNVIFGGQVIRNGDESLPYLPLHLHPDHYSRTKSIAEQKVLEANATPLDRGDGVLRT 180
Query: 181 CALRPAGIYGPGEQRHLPRIVSYIEKGLFKFVYGDPRSLVEFVHVDNLVQAHILASEALR 240
CALRPAGIYGPGEQRHLPRIVSYIEKGLFKFVYGDPRSLVEFVHVDNLVQAHILASEALR
Sbjct: 181 CALRPAGIYGPGEQRHLPRIVSYIEKGLFKFVYGDPRSLVEFVHVDNLVQAHILASEALR 240
Query: 241 ADKGHIASGQPYFISDGRPVNNFEFFRPLVEGLGYTFPSTRLPLTLVYCFAFLTEMVHFI 300
ADKGHIASGQPYFISDGRPVNNFEFFRPLVEGLGYTFPSTRLPLTLVYCFAFLTEMVHFI
Sbjct: 241 ADKGHIASGQPYFISDGRPVNNFEFFRPLVEGLGYTFPSTRLPLTLVYCFAFLTEMVHFI 300
Query: 301 LGRLYNFQPFLTRTEVYKTGVTHYFSLEKAKKELGYKAQPFDLQEAVEWFKAHGHGRSSG 360
LGRLYNFQPFLTRTEVYKTGVTHYFSLEKAKKELGYKAQPFDLQEAVEWFKAHGHGRSSG
Sbjct: 301 LGRLYNFQPFLTRTEVYKTGVTHYFSLEKAKKELGYKAQPFDLQEAVEWFKAHGHGRSSG 360
Query: 361 SRDSECFVWDGLLVFLLIIAVLMWLPSSVILSL 393
SRDSECFVWDGLLVFLLIIAVLMWLPSSVILSL
Sbjct: 361 SRDSECFVWDGLLVFLLIIAVLMWLPSSVILSL 393
>gi|239745448 PREDICTED: hypothetical protein XP_002343493 [Homo
sapiens]
Length = 422
Score = 347 bits (890), Expect = 1e-95
Identities = 181/360 (50%), Positives = 234/360 (65%), Gaps = 4/360 (1%)
Query: 3 PKRSQKESVLITGGSGYFGFRLGCALNQNGVHVILFDISSPAQTIPEGIKFIQGDIRHLS 62
P ++ ++ VL+TGG GY GF LG L ++G VIL D P + KFIQ D+R
Sbjct: 28 PTKAARQKVLVTGGGGYLGFSLGSHLAKSGTSVILLDRRRPQWELSPETKFIQADVRDEE 87
Query: 63 DVEKAFQDADVTCVFHIASYGMSGREQLNRNLIKEVNVRGTDNILQVCQRRRVPRLVYTS 122
+ +AF+ D CVFH+ASYGMSG E+L + I+ +NV GT ++ VC RRRVPRL+YTS
Sbjct: 88 ALYRAFEGVD--CVFHVASYGMSGAEKLQKEQIESINVGGTKLVIDVCVRRRVPRLIYTS 145
Query: 123 TFNVIFGGQVIRNGDE-SLPYLPLHLHPDHYSRTKSIAEQKVLEANATPLDRGDGVLRTC 181
T NV FGG+ I GDE S+PY PL H DHYSRTK+IA+Q L AN PL G G LRTC
Sbjct: 146 TVNVAFGGKPIEQGDEDSVPYFPLDEHVDHYSRTKAIADQLTLMANGMPLP-GGGTLRTC 204
Query: 182 ALRPAGIYGPGEQRHLPRIVSYIEKGLFKFVYGDPRSLVEFVHVDNLVQAHILASEALRA 241
LRP GIYGP EQRHLPR+ +I+K LF F +GD ++ + +VHV NLVQAH+LA+EAL
Sbjct: 205 VLRPPGIYGPEEQRHLPRVAGHIKKRLFMFRFGDHKARMNWVHVHNLVQAHVLAAEALTT 264
Query: 242 DKGHIASGQPYFISDGRPVNNFEFFRPLVEGLGYTFPSTRLPLTLVYCFAFLTEMVHFIL 301
KG++ASGQ Y+I+DG VN FE+ PL E LGY+ P ++P + VY A + E +H L
Sbjct: 265 AKGYVASGQAYYINDGESVNLFEWMAPLFEKLGYSQPWIQVPTSWVYLTAAVMERLHLAL 324
Query: 302 GRLYNFQPFLTRTEVYKTGVTHYFSLEKAKKELGYKAQPFDLQEAVEWFKAHGHGRSSGS 361
+ + P LTR+EV VTH F + KA+ +LGY F +AVE + R GS
Sbjct: 325 RPICSLPPLLTRSEVRSVAVTHTFQIAKARAQLGYAPDKFRFADAVELYVQSTTRRPRGS 384
>gi|239756515 PREDICTED: similar to Putative 3-beta-HSD family
protein ENSP00000330812 [Homo sapiens]
Length = 422
Score = 346 bits (887), Expect = 2e-95
Identities = 181/360 (50%), Positives = 233/360 (64%), Gaps = 4/360 (1%)
Query: 3 PKRSQKESVLITGGSGYFGFRLGCALNQNGVHVILFDISSPAQTIPEGIKFIQGDIRHLS 62
P ++ ++ VL+TGG GY GF LG L ++G VIL D P + KFIQ D+R
Sbjct: 28 PTKAARQKVLVTGGGGYLGFSLGSHLAKSGTSVILLDRRRPQWELSPETKFIQADVRDEE 87
Query: 63 DVEKAFQDADVTCVFHIASYGMSGREQLNRNLIKEVNVRGTDNILQVCQRRRVPRLVYTS 122
+ AF+ D CVFH+ASYGMSG E+L + I+ +NV GT ++ VC RRRVPRL+YTS
Sbjct: 88 ALYHAFEGVD--CVFHVASYGMSGAEKLQKEQIESINVGGTKLVIDVCVRRRVPRLIYTS 145
Query: 123 TFNVIFGGQVIRNGDE-SLPYLPLHLHPDHYSRTKSIAEQKVLEANATPLDRGDGVLRTC 181
T NV FGG+ I GDE S+PY PL H DHYSRTK+IA+Q L AN PL G G LRTC
Sbjct: 146 TVNVAFGGKPIEQGDEDSVPYFPLDEHVDHYSRTKAIADQLTLMANGMPLP-GGGTLRTC 204
Query: 182 ALRPAGIYGPGEQRHLPRIVSYIEKGLFKFVYGDPRSLVEFVHVDNLVQAHILASEALRA 241
LRP GIYGP EQRHLPR+ +I+K LF F +GD ++ + +VHV NLVQAH+LA+EAL
Sbjct: 205 VLRPPGIYGPEEQRHLPRVAGHIKKRLFMFRFGDHKARMNWVHVHNLVQAHVLAAEALTT 264
Query: 242 DKGHIASGQPYFISDGRPVNNFEFFRPLVEGLGYTFPSTRLPLTLVYCFAFLTEMVHFIL 301
KG++ASGQ Y+I+DG VN FE+ PL E LGY+ P ++P + VY A + E +H L
Sbjct: 265 AKGYVASGQAYYINDGESVNLFEWMAPLFEKLGYSQPWIQVPTSWVYLTAAVMERLHLAL 324
Query: 302 GRLYNFQPFLTRTEVYKTGVTHYFSLEKAKKELGYKAQPFDLQEAVEWFKAHGHGRSSGS 361
+ + P LTR+EV VTH F + KA+ +LGY F +AVE + R GS
Sbjct: 325 RPICSLPPLLTRSEVRSVAVTHTFQIAKARAQLGYAPDKFRFADAVELYVQSTTRRPRGS 384
>gi|239751020 PREDICTED: hypothetical protein XP_002347673 [Homo
sapiens]
Length = 422
Score = 346 bits (887), Expect = 2e-95
Identities = 181/360 (50%), Positives = 233/360 (64%), Gaps = 4/360 (1%)
Query: 3 PKRSQKESVLITGGSGYFGFRLGCALNQNGVHVILFDISSPAQTIPEGIKFIQGDIRHLS 62
P ++ ++ VL+TGG GY GF LG L ++G VIL D P + KFIQ D+R
Sbjct: 28 PTKAARQKVLVTGGGGYLGFSLGSHLAKSGTSVILLDRRRPQWELSPETKFIQADVRDEE 87
Query: 63 DVEKAFQDADVTCVFHIASYGMSGREQLNRNLIKEVNVRGTDNILQVCQRRRVPRLVYTS 122
+ AF+ D CVFH+ASYGMSG E+L + I+ +NV GT ++ VC RRRVPRL+YTS
Sbjct: 88 ALYHAFEGVD--CVFHVASYGMSGAEKLQKEQIESINVGGTKLVIDVCVRRRVPRLIYTS 145
Query: 123 TFNVIFGGQVIRNGDE-SLPYLPLHLHPDHYSRTKSIAEQKVLEANATPLDRGDGVLRTC 181
T NV FGG+ I GDE S+PY PL H DHYSRTK+IA+Q L AN PL G G LRTC
Sbjct: 146 TVNVAFGGKPIEQGDEDSVPYFPLDEHVDHYSRTKAIADQLTLMANGMPLP-GGGTLRTC 204
Query: 182 ALRPAGIYGPGEQRHLPRIVSYIEKGLFKFVYGDPRSLVEFVHVDNLVQAHILASEALRA 241
LRP GIYGP EQRHLPR+ +I+K LF F +GD ++ + +VHV NLVQAH+LA+EAL
Sbjct: 205 VLRPPGIYGPEEQRHLPRVAGHIKKRLFMFRFGDHKARMNWVHVHNLVQAHVLAAEALTT 264
Query: 242 DKGHIASGQPYFISDGRPVNNFEFFRPLVEGLGYTFPSTRLPLTLVYCFAFLTEMVHFIL 301
KG++ASGQ Y+I+DG VN FE+ PL E LGY+ P ++P + VY A + E +H L
Sbjct: 265 AKGYVASGQAYYINDGESVNLFEWMAPLFEKLGYSQPWIQVPTSWVYLTAAVMERLHLAL 324
Query: 302 GRLYNFQPFLTRTEVYKTGVTHYFSLEKAKKELGYKAQPFDLQEAVEWFKAHGHGRSSGS 361
+ + P LTR+EV VTH F + KA+ +LGY F +AVE + R GS
Sbjct: 325 RPICSLPPLLTRSEVRSVAVTHTFQIAKARAQLGYAPDKFRFADAVELYVQSTTRRPRGS 384
>gi|193211614 NAD(P) dependent steroid dehydrogenase-like [Homo
sapiens]
Length = 373
Score = 174 bits (440), Expect = 2e-43
Identities = 110/333 (33%), Positives = 172/333 (51%), Gaps = 16/333 (4%)
Query: 5 RSQKESVLITGGSGYFGFRLGCALNQNGVHVILFDISSPAQTIPEGIKFIQGDIRHLSDV 64
++Q + + GGSG+ G + L G V +FDI P+ ++F GD+ D+
Sbjct: 34 QNQAKRCTVIGGSGFLGQHMVEQLLARGYAVNVFDIQQGFDN-PQ-VRFFLGDLCSRQDL 91
Query: 65 EKAFQDADVTCVFHIASYGMSGREQLNRNLIKEVNVRGTDNILQVCQRRRVPRLVYTSTF 124
A + V VFH AS S N+ L VN GT N+++ C+ V +L+ TS+
Sbjct: 92 YPALKG--VNTVFHCASPPPSSN---NKELFYRVNYIGTKNVIETCKEAGVQKLILTSSA 146
Query: 125 NVIFGGQVIRNGDESLPYLPLHLHPDHYSRTKSIAEQKVLEANATPLDRGDGVLRTCALR 184
+VIF G I+NG E LPY + D+Y+ TK + E+ VL AN + T A+R
Sbjct: 147 SVIFEGVDIKNGTEDLPYAMKPI--DYYTETKILQERAVLGANDPEKN-----FLTTAIR 199
Query: 185 PAGIYGPGEQRHLPRIVSYIEKGLFKFVYGDPRSLVEFVHVDNLVQAHILASEALRADKG 244
P GI+GP + + +P ++ G KFV G+ ++LV+F V+N+V HILA+E L D
Sbjct: 200 PHGIFGPRDPQLVPILIEAARNGKMKFVIGNGKNLVDFTFVENVVHGHILAAEQLSRDS- 258
Query: 245 HIASGQPYFISDGRPVNNFEFFRPLVEGLGYTFPSTRLPLTLVYCFAFLTEMVHFILGRL 304
G+ + I++ P+ + F ++ GL Y P +P + Y A L ++ ++ +
Sbjct: 259 -TLGGKAFHITNDEPIPFWTFLSRILTGLNYEAPKYHIPYWVAYYLALLLSLLVMVISPV 317
Query: 305 YNFQPFLTRTEVYKTGVTHYFSLEKAKKELGYK 337
QP T V G HY+S E+AKK +GY+
Sbjct: 318 IQLQPTFTPMRVALAGTFHYYSCERAKKAMGYQ 350
>gi|8393516 NAD(P) dependent steroid dehydrogenase-like [Homo
sapiens]
Length = 373
Score = 174 bits (440), Expect = 2e-43
Identities = 110/333 (33%), Positives = 172/333 (51%), Gaps = 16/333 (4%)
Query: 5 RSQKESVLITGGSGYFGFRLGCALNQNGVHVILFDISSPAQTIPEGIKFIQGDIRHLSDV 64
++Q + + GGSG+ G + L G V +FDI P+ ++F GD+ D+
Sbjct: 34 QNQAKRCTVIGGSGFLGQHMVEQLLARGYAVNVFDIQQGFDN-PQ-VRFFLGDLCSRQDL 91
Query: 65 EKAFQDADVTCVFHIASYGMSGREQLNRNLIKEVNVRGTDNILQVCQRRRVPRLVYTSTF 124
A + V VFH AS S N+ L VN GT N+++ C+ V +L+ TS+
Sbjct: 92 YPALKG--VNTVFHCASPPPSSN---NKELFYRVNYIGTKNVIETCKEAGVQKLILTSSA 146
Query: 125 NVIFGGQVIRNGDESLPYLPLHLHPDHYSRTKSIAEQKVLEANATPLDRGDGVLRTCALR 184
+VIF G I+NG E LPY + D+Y+ TK + E+ VL AN + T A+R
Sbjct: 147 SVIFEGVDIKNGTEDLPYAMKPI--DYYTETKILQERAVLGANDPEKN-----FLTTAIR 199
Query: 185 PAGIYGPGEQRHLPRIVSYIEKGLFKFVYGDPRSLVEFVHVDNLVQAHILASEALRADKG 244
P GI+GP + + +P ++ G KFV G+ ++LV+F V+N+V HILA+E L D
Sbjct: 200 PHGIFGPRDPQLVPILIEAARNGKMKFVIGNGKNLVDFTFVENVVHGHILAAEQLSRDS- 258
Query: 245 HIASGQPYFISDGRPVNNFEFFRPLVEGLGYTFPSTRLPLTLVYCFAFLTEMVHFILGRL 304
G+ + I++ P+ + F ++ GL Y P +P + Y A L ++ ++ +
Sbjct: 259 -TLGGKAFHITNDEPIPFWTFLSRILTGLNYEAPKYHIPYWVAYYLALLLSLLVMVISPV 317
Query: 305 YNFQPFLTRTEVYKTGVTHYFSLEKAKKELGYK 337
QP T V G HY+S E+AKK +GY+
Sbjct: 318 IQLQPTFTPMRVALAGTFHYYSCERAKKAMGYQ 350
>gi|4504509 3 beta-hydroxysteroid dehydrogenase 2 [Homo sapiens]
Length = 372
Score = 128 bits (322), Expect = 8e-30
Identities = 107/310 (34%), Positives = 154/310 (49%), Gaps = 26/310 (8%)
Query: 54 IQGDIRHLSDVEKAFQDADVT----CVFHIASYGMSGREQLNRNLIKEVNVRGTDNILQV 109
++GDI +++A QD V C+ + +G++ RE I VNV+GT +L+
Sbjct: 58 LEGDILDEPFLKRACQDVSVVIHTACIIDV--FGVTHRES-----IMNVNVKGTQLLLEA 110
Query: 110 CQRRRVPRLVYTSTFNVIFGG---QVIRNGDESLPYLPLHLHPDHYSRTKSIAEQKVLEA 166
C + VP +YTS+ V ++I+NG E P + P Y +K +AE+ VL A
Sbjct: 111 CVQASVPVFIYTSSIEVAGPNSYKEIIQNGHEEEPLE--NTWPTPYPYSKKLAEKAVLAA 168
Query: 167 NATPLDRGDGVLRTCALRPAGIYGPGEQRHLPRIVSYIEK-GLFKFVYGDPRSLVEFVHV 225
N L GD L TCALRP IYG G I + G+ V S V V+V
Sbjct: 169 NGWNLKNGD-TLYTCALRPTYIYGEGGPFLSASINEALNNNGILSSV--GKFSTVNPVYV 225
Query: 226 DNLVQAHILASEALR-ADKGHIASGQPYFISDGRPVNNFEFFRPLV-EGLGYTFPST-RL 282
N+ AHILA ALR K GQ Y+ISD P +++ ++ + G S L
Sbjct: 226 GNVAWAHILALRALRDPKKAPSVRGQFYYISDDTPHQSYDNLNYILSKEFGLRLDSRWSL 285
Query: 283 PLTLVYCFAFLTEMVHFILGRLYNFQPFLTRTEVYKTGVTHYFSLEKAKKELGYK---AQ 339
PLTL+Y FL E+V F+L +Y++QP R V + FS +KA+++L YK +
Sbjct: 286 PLTLMYWIGFLLEVVSFLLSPIYSYQPPFNRHTVTLSNSVFTFSYKKAQRDLAYKPLYSW 345
Query: 340 PFDLQEAVEW 349
Q+ VEW
Sbjct: 346 EEAKQKTVEW 355
>gi|19923621 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and
steroid delta-isomerase 7 isoform a [Homo sapiens]
Length = 369
Score = 123 bits (308), Expect = 3e-28
Identities = 116/356 (32%), Positives = 163/356 (45%), Gaps = 33/356 (9%)
Query: 2 DPKRSQKESVLITGGSGYFGFRLGCALNQNGVHV---ILFDIS-----SPAQTIPEGIKF 53
D ++QK L+TGG G+ G + L Q + +FD +T P +
Sbjct: 3 DSAQAQKLVYLVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEELKTGPVRVTA 62
Query: 54 IQGDIRHLSDVEKAFQDADVTCVFHIASY-GMSGREQLNRNLIKEVNVRGTDNILQVCQR 112
IQGD+ +V A A V V H A + GR + I EVNV+GT N+++ C +
Sbjct: 63 IQGDVTQAHEVAAAVAGAHV--VIHTAGLVDVFGRA--SPKTIHEVNVQGTRNVIEACVQ 118
Query: 113 RRVPRLVYTSTFNVI---FGGQVIRNGDESLPYLPLHLHPDHYSRTKSIAEQKVLEANAT 169
LVYTS+ V+ G G+E PY +H HP Y +K++AE VLEAN
Sbjct: 119 TGTRFLVYTSSMEVVGPNTKGHPFYRGNEDTPYEAVHRHP--YPCSKALAEWLVLEANGR 176
Query: 170 PLDRGDGVLRTCALRPAGIYGPGEQ--RHLPRIVSYIEKGLFKFVYGDPRSLVE-FVHVD 226
+ RG L TCALRP GIYG G Q R R + LF+ + P S+ V+V
Sbjct: 177 KV-RGGLPLVTCALRPTGIYGEGHQIMRDFYRQGLRLGGWLFRAI---PASVEHGRVYVG 232
Query: 227 NLVQAHILASEALRADKGHIASGQPYFISDGRPVN-----NFEFFRPLVEGLGYTFPSTR 281
N+ H+LA+ L + + GQ YF DG P N EF P GL
Sbjct: 233 NVAWMHVLAARELE-QRATLMGGQVYFCYDGSPYRSYEDFNMEFLGPC--GLRLVGARPL 289
Query: 282 LPLTLVYCFAFLTEMVHFILGRLYNFQPFLTRTEVYKTGVTHYFSLEKAKKELGYK 337
LP L+ A L ++ ++L L + P L + T S +KA++ GY+
Sbjct: 290 LPYWLLVFLAALNALLQWLLRPLVLYAPLLNPYTLAVANTTFTVSTDKAQRHFGYE 345
>gi|4504507 3 beta-hydroxysteroid dehydrogenase 1 [Homo sapiens]
Length = 373
Score = 122 bits (306), Expect = 6e-28
Identities = 115/364 (31%), Positives = 171/364 (46%), Gaps = 36/364 (9%)
Query: 10 SVLITGGSGYFGFRLGCAL--NQNGVHVILFDISSPAQTIPEGIKF--------IQGDIR 59
S L+TG G+ G R+ L + + + D + + E K ++GDI
Sbjct: 5 SCLVTGAGGFLGQRIIRLLVKEKELKEIRVLDKAFGPELREEFSKLQNKTKLTVLEGDIL 64
Query: 60 HLSDVEKAFQDADV----TCVFHIASYGMSGREQLNRNLIKEVNVRGTDNILQVCQRRRV 115
+++A QD V C+ + +G++ RE I VNV+GT +L+ C + V
Sbjct: 65 DEPFLKRACQDVSVIIHTACIIDV--FGVTHRES-----IMNVNVKGTQLLLEACVQASV 117
Query: 116 PRLVYTSTFNVIFGG---QVIRNGDESLPYLPLHLHPDHYSRTKSIAEQKVLEANATPLD 172
P +YTS+ V ++I+NG E P + P Y +K +AE+ VL AN L
Sbjct: 118 PVFIYTSSIEVAGPNSYKEIIQNGHEEEPLE--NTWPAPYPHSKKLAEKAVLAANGWNLK 175
Query: 173 RGDGVLRTCALRPAGIYGPGEQRHLPRIVSYIEK-GLFKFVYGDPRSLVEFVHVDNLVQA 231
G G L TCALRP IYG G + I + G+ V S V V+V N+ A
Sbjct: 176 NG-GTLYTCALRPMYIYGEGSRFLSASINEALNNNGILSSV--GKFSTVNPVYVGNVAWA 232
Query: 232 HILASEALR-ADKGHIASGQPYFISDGRPVNNFEFFR-PLVEGLGYTFPST-RLPLTLVY 288
HILA AL+ K GQ Y+ISD P +++ L + G S PL+L+Y
Sbjct: 233 HILALRALQDPKKAPSIRGQFYYISDDTPHQSYDNLNYTLSKEFGLRLDSRWSFPLSLMY 292
Query: 289 CFAFLTEMVHFILGRLYNFQPFLTRTEVYKTGVTHYFSLEKAKKELGYK---AQPFDLQE 345
FL E+V F+L +Y ++P R V + FS +KA+++L YK + Q+
Sbjct: 293 WIGFLLEIVSFLLRPIYTYRPPFNRHIVTLSNSVFTFSYKKAQRDLAYKPLYSWEEAKQK 352
Query: 346 AVEW 349
VEW
Sbjct: 353 TVEW 356
>gi|218563686 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and
steroid delta-isomerase 7 isoform b [Homo sapiens]
Length = 196
Score = 68.9 bits (167), Expect = 7e-12
Identities = 60/178 (33%), Positives = 85/178 (47%), Gaps = 18/178 (10%)
Query: 2 DPKRSQKESVLITGGSGYFGFRLGCALNQNGVHV---ILFDIS-----SPAQTIPEGIKF 53
D ++QK L+TGG G+ G + L Q + +FD +T P +
Sbjct: 3 DSAQAQKLVYLVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEELKTGPVRVTA 62
Query: 54 IQGDIRHLSDVEKAFQDADVTCVFHIASY-GMSGREQLNRNLIKEVNVRGTDNILQVCQR 112
IQGD+ +V A A V V H A + GR + I EVNV+GT N+++ C +
Sbjct: 63 IQGDVTQAHEVAAAVAGAHV--VIHTAGLVDVFGRA--SPKTIHEVNVQGTRNVIEACVQ 118
Query: 113 RRVPRLVYTSTFNVI---FGGQVIRNGDESLPYLPLHLHPDHYSRTKSIAEQKVLEAN 167
LVYTS+ V+ G G+E PY +H HP Y +K++AE VLEAN
Sbjct: 119 TGTRFLVYTSSMEVVGPNTKGHPFYRGNEDTPYEAVHRHP--YPCSKALAEWLVLEAN 174
>gi|218563684 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and
steroid delta-isomerase 7 isoform b [Homo sapiens]
Length = 196
Score = 68.9 bits (167), Expect = 7e-12
Identities = 60/178 (33%), Positives = 85/178 (47%), Gaps = 18/178 (10%)
Query: 2 DPKRSQKESVLITGGSGYFGFRLGCALNQNGVHV---ILFDIS-----SPAQTIPEGIKF 53
D ++QK L+TGG G+ G + L Q + +FD +T P +
Sbjct: 3 DSAQAQKLVYLVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEELKTGPVRVTA 62
Query: 54 IQGDIRHLSDVEKAFQDADVTCVFHIASY-GMSGREQLNRNLIKEVNVRGTDNILQVCQR 112
IQGD+ +V A A V V H A + GR + I EVNV+GT N+++ C +
Sbjct: 63 IQGDVTQAHEVAAAVAGAHV--VIHTAGLVDVFGRA--SPKTIHEVNVQGTRNVIEACVQ 118
Query: 113 RRVPRLVYTSTFNVI---FGGQVIRNGDESLPYLPLHLHPDHYSRTKSIAEQKVLEAN 167
LVYTS+ V+ G G+E PY +H HP Y +K++AE VLEAN
Sbjct: 119 TGTRFLVYTSSMEVVGPNTKGHPFYRGNEDTPYEAVHRHP--YPCSKALAEWLVLEAN 174
>gi|7657641 TDP-glucose 4,6-dehydratase [Homo sapiens]
Length = 350
Score = 60.8 bits (146), Expect = 2e-09
Identities = 55/238 (23%), Positives = 106/238 (44%), Gaps = 29/238 (12%)
Query: 11 VLITGGSGYFGFRLGCALNQNGVHVILFDISS--------PAQTIP--EGIKFIQGDIRH 60
VL+TGG+G+ + +L ++ + ++ ++ +TI + KFIQGDI
Sbjct: 20 VLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDICD 79
Query: 61 LSDVEKAFQDADVTCVFHIASYGMSGREQLNRNLIKEVNVRGTDNILQVCQRRRVPRLVY 120
V+ F+ + V H A+ + VNV GT ++ RV + +Y
Sbjct: 80 SHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAHEARVEKFIY 139
Query: 121 TSTFNVIFGGQVIRNGDESLPYLPLHLHPDHYSRTKSIAE---QKVLEANATPLDRGDGV 177
ST + ++GG + + DES P P + Y+ +K+ AE Q E P+
Sbjct: 140 VST-DEVYGGSLDKEFDESSPKQP----TNPYASSKAAAECFVQSYWEQYKFPV------ 188
Query: 178 LRTCALRPAGIYGPGE--QRHLPRIVSYIEKGLFKFVYGDPRSLVEFVHVDNLVQAHI 233
R + +YGP + ++ +P+ +S ++ ++G F++ ++V+A +
Sbjct: 189 ---VITRSSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVVEAFL 243
>gi|56118217 UDP-galactose-4-epimerase [Homo sapiens]
Length = 348
Score = 46.6 bits (109), Expect = 4e-05
Identities = 65/276 (23%), Positives = 108/276 (39%), Gaps = 55/276 (19%)
Query: 9 ESVLITGGSGYFGFRLGCALNQNGVHVILFDISSPA----QTIPEGIKFIQG-------- 56
E VL+TGG+GY G L + G ++ D A ++PE ++ +Q
Sbjct: 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEF 62
Query: 57 ---DIRHLSDVEKAFQDADVTCVFHIASYGMSGREQLNRNLIKEVNVRGTDNILQVCQRR 113
DI +++ F+ V H A G VN+ GT +L++ +
Sbjct: 63 EEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH 122
Query: 114 RVPRLVYTSTFNVIFGGQVIRNGDESLPYLPL-HLHP-----DHYSRTKSIAEQKVLEAN 167
V LV++S+ V Q YLPL HP + Y ++K E+ + +
Sbjct: 123 GVKNLVFSSSATVYGNPQ----------YLPLDEAHPTGGCTNPYGKSKFFIEEMIRD-- 170
Query: 168 ATPLDRGDGVLRTCALR---PAGIYGPG----EQRHLPR----IVSYIEKGLFKF--VYG 214
L + D LR P G + G + + +P VS + G + V+G
Sbjct: 171 ---LCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFG 227
Query: 215 ------DPRSLVEFVHVDNLVQAHILASEALRADKG 244
D + +++HV +L + HI A L+ G
Sbjct: 228 NDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCG 263
>gi|56237023 UDP-galactose-4-epimerase [Homo sapiens]
Length = 348
Score = 46.6 bits (109), Expect = 4e-05
Identities = 65/276 (23%), Positives = 108/276 (39%), Gaps = 55/276 (19%)
Query: 9 ESVLITGGSGYFGFRLGCALNQNGVHVILFDISSPA----QTIPEGIKFIQG-------- 56
E VL+TGG+GY G L + G ++ D A ++PE ++ +Q
Sbjct: 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEF 62
Query: 57 ---DIRHLSDVEKAFQDADVTCVFHIASYGMSGREQLNRNLIKEVNVRGTDNILQVCQRR 113
DI +++ F+ V H A G VN+ GT +L++ +
Sbjct: 63 EEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH 122
Query: 114 RVPRLVYTSTFNVIFGGQVIRNGDESLPYLPL-HLHP-----DHYSRTKSIAEQKVLEAN 167
V LV++S+ V Q YLPL HP + Y ++K E+ + +
Sbjct: 123 GVKNLVFSSSATVYGNPQ----------YLPLDEAHPTGGCTNPYGKSKFFIEEMIRD-- 170
Query: 168 ATPLDRGDGVLRTCALR---PAGIYGPG----EQRHLPR----IVSYIEKGLFKF--VYG 214
L + D LR P G + G + + +P VS + G + V+G
Sbjct: 171 ---LCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFG 227
Query: 215 ------DPRSLVEFVHVDNLVQAHILASEALRADKG 244
D + +++HV +L + HI A L+ G
Sbjct: 228 NDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCG 263
>gi|189083684 UDP-galactose-4-epimerase [Homo sapiens]
Length = 348
Score = 46.6 bits (109), Expect = 4e-05
Identities = 65/276 (23%), Positives = 108/276 (39%), Gaps = 55/276 (19%)
Query: 9 ESVLITGGSGYFGFRLGCALNQNGVHVILFDISSPA----QTIPEGIKFIQG-------- 56
E VL+TGG+GY G L + G ++ D A ++PE ++ +Q
Sbjct: 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEF 62
Query: 57 ---DIRHLSDVEKAFQDADVTCVFHIASYGMSGREQLNRNLIKEVNVRGTDNILQVCQRR 113
DI +++ F+ V H A G VN+ GT +L++ +
Sbjct: 63 EEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH 122
Query: 114 RVPRLVYTSTFNVIFGGQVIRNGDESLPYLPL-HLHP-----DHYSRTKSIAEQKVLEAN 167
V LV++S+ V Q YLPL HP + Y ++K E+ + +
Sbjct: 123 GVKNLVFSSSATVYGNPQ----------YLPLDEAHPTGGCTNPYGKSKFFIEEMIRD-- 170
Query: 168 ATPLDRGDGVLRTCALR---PAGIYGPG----EQRHLPR----IVSYIEKGLFKF--VYG 214
L + D LR P G + G + + +P VS + G + V+G
Sbjct: 171 ---LCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFG 227
Query: 215 ------DPRSLVEFVHVDNLVQAHILASEALRADKG 244
D + +++HV +L + HI A L+ G
Sbjct: 228 NDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCG 263
>gi|42516563 UDP-glucuronate decarboxylase 1 [Homo sapiens]
Length = 420
Score = 33.5 bits (75), Expect = 0.34
Identities = 48/225 (21%), Positives = 85/225 (37%), Gaps = 27/225 (12%)
Query: 8 KESVLITGGSGYFGFRLGCALNQNGVHVILFD--ISSPAQTIPEGIKFIQGDIRHLSDVE 65
++ +LITGG+G+ G L L +G V + D + + + I ++ + VE
Sbjct: 88 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVE 147
Query: 66 KAFQDADVTCVFHIASYGMSGREQLNRNLIKEVNVRGTDNILQVCQRRRVPRLVYTSTFN 125
+ + D ++H+AS N + N GT N+L + +R RL+ ST
Sbjct: 148 PLYIEVDQ--IYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSE 204
Query: 126 VIFGGQVIRNGDESLPYLPLHLHPDHYSRTKSIAE----------------QKVLEANAT 169
V +V ++ ++ Y K +AE ++
Sbjct: 205 VYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGP 264
Query: 170 PLDRGDG------VLRTCALRPAGIYGPGEQRHLPRIVSYIEKGL 208
+ DG +L+ P +YG G Q + VS + GL
Sbjct: 265 RMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGL 309
>gi|46852147 mitochondrial isoleucine tRNA synthetase [Homo sapiens]
Length = 1012
Score = 29.3 bits (64), Expect = 6.4
Identities = 26/95 (27%), Positives = 36/95 (37%), Gaps = 15/95 (15%)
Query: 122 STFNVI--FGGQVIRNGDESLPYLPLHLHPDHYSRTKSIAEQKVLEANATPLDRGDGVLR 179
+TF I G + NG S P +P P +L AN + +G G++
Sbjct: 346 TTFETISTLSGVDLENGTCSHPLIPDKASP-------------LLPANHVTMAKGTGLVH 392
Query: 180 TCALRPAGIYGPGEQRHLPRIVSYIEKGLFKFVYG 214
T YG Q +LP E G+F V G
Sbjct: 393 TAPAHGMEDYGVASQHNLPMDCLVDEDGVFTDVAG 427
>gi|154813204 inhibin beta B subunit preproprotein [Homo sapiens]
Length = 407
Score = 29.3 bits (64), Expect = 6.4
Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Query: 88 EQLNRNLIKEVNVRGTDNILQVCQRRRVPRLVYTSTFNVIFGGQVIRNGDESLPYLPLHL 147
E + R+++ + +RG NI VP+ + + G+V +G +P+L H
Sbjct: 76 EAVKRHILSRLQMRGRPNITHA-----VPKAAMVTALRKLHAGKVREDGRVEIPHLDGHA 130
Query: 148 HP 149
P
Sbjct: 131 SP 132
>gi|41393563 kinesin family member 1B isoform b [Homo sapiens]
Length = 1770
Score = 29.3 bits (64), Expect = 6.4
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 318 KTGVTHYFSLEKAKKELGYKAQPFD 342
K G THY+SLEK K+ L + +D
Sbjct: 787 KNGATHYWSLEKLKQRLDLMREMYD 811
>gi|33519455 methionine adenosyltransferase II, beta isoform 2 [Homo
sapiens]
Length = 323
Score = 29.3 bits (64), Expect = 6.4
Identities = 37/159 (23%), Positives = 64/159 (40%), Gaps = 17/159 (10%)
Query: 11 VLITGGSGYFGFRLGCALNQNGVHVI--LFDISSPAQTIPEGIKFIQGDIRHLSDVEKAF 68
VL+TG +G G + QN H + F + P KF Q ++ + V
Sbjct: 20 VLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARP--------KFEQVNLLDSNAVHHII 71
Query: 69 QDADVTCVFHIASYGMSGREQLNRNLIKEVNVRGTDNILQVCQRRRVPRLVYTSTFNVIF 128
D + H A+ + + ++NV + N+ + + V + + + +F
Sbjct: 72 HDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAK--EAAAVGAFLIYISSDYVF 129
Query: 129 GGQVIRNGDESLPYLPLHLHPDHYSRTKSIAEQKVLEAN 167
G +E +P PL+L Y +TK E+ VLE N
Sbjct: 130 DGTNPPYREEDIP-APLNL----YGKTKLDGEKAVLENN 163
>gi|11034825 methionine adenosyltransferase II, beta isoform 1 [Homo
sapiens]
Length = 334
Score = 29.3 bits (64), Expect = 6.4
Identities = 37/159 (23%), Positives = 64/159 (40%), Gaps = 17/159 (10%)
Query: 11 VLITGGSGYFGFRLGCALNQNGVHVI--LFDISSPAQTIPEGIKFIQGDIRHLSDVEKAF 68
VL+TG +G G + QN H + F + P KF Q ++ + V
Sbjct: 31 VLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARP--------KFEQVNLLDSNAVHHII 82
Query: 69 QDADVTCVFHIASYGMSGREQLNRNLIKEVNVRGTDNILQVCQRRRVPRLVYTSTFNVIF 128
D + H A+ + + ++NV + N+ + + V + + + +F
Sbjct: 83 HDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAK--EAAAVGAFLIYISSDYVF 140
Query: 129 GGQVIRNGDESLPYLPLHLHPDHYSRTKSIAEQKVLEAN 167
G +E +P PL+L Y +TK E+ VLE N
Sbjct: 141 DGTNPPYREEDIP-APLNL----YGKTKLDGEKAVLENN 174
>gi|72384365 zinc finger protein 816A [Homo sapiens]
Length = 651
Score = 28.9 bits (63), Expect = 8.4
Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Query: 194 QRHLPRIVSYIEKGLFKFVYGDPRSLVEFVHVDNLVQAHILASEALRADKGHIASGQPYF 253
QR L R V +FV +S++EF + + ++ + L+ K H G F
Sbjct: 45 QRALYRAVMLENYRNLEFVDSSLKSMMEFSSTRHSITGEVIHTGTLQRHKSH-HIGDFCF 103
Query: 254 ISDGRPVNNFEFFRPLVEGLGYTFPSTRL 282
+ +++FEF VE G+ P T++
Sbjct: 104 PEMKKDIHHFEFQWQEVERNGHEAPMTKI 132
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.142 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,228,056
Number of Sequences: 37866
Number of extensions: 691771
Number of successful extensions: 1308
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1255
Number of HSP's gapped (non-prelim): 23
length of query: 393
length of database: 18,247,518
effective HSP length: 104
effective length of query: 289
effective length of database: 14,309,454
effective search space: 4135432206
effective search space used: 4135432206
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.