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Search of human proteins with 239740767
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239740767 PREDICTED: hypothetical protein [Homo sapiens]
(204 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239740767 PREDICTED: hypothetical protein [Homo sapiens] 421 e-118
gi|160333411 early B-cell factor 4 [Homo sapiens] 37 0.012
gi|150378545 POM121 membrane glycoprotein (rat)-like [Homo sapiens] 35 0.034
gi|169214023 PREDICTED: hypothetical protein [Homo sapiens] 34 0.098
gi|169214468 PREDICTED: hypothetical protein [Homo sapiens] 34 0.098
gi|33519444 amiloride-sensitive cation channel 4 isoform 2 [Homo... 34 0.098
gi|33519442 amiloride-sensitive cation channel 4 isoform 1 [Homo... 34 0.098
gi|7662346 ADNP homeobox 2 [Homo sapiens] 34 0.098
gi|223972690 adenosine deaminase domain containing 2 isoform 2 [... 33 0.13
gi|223972688 adenosine deaminase domain containing 2 isoform 1 [... 33 0.13
gi|64084766 fidgetin [Homo sapiens] 33 0.17
gi|56676337 transmembrane protein 28 [Homo sapiens] 33 0.17
gi|72004269 tetra-peptide repeat homeobox [Homo sapiens] 33 0.17
gi|169213235 PREDICTED: hypothetical protein [Homo sapiens] 32 0.29
gi|239747654 PREDICTED: hypothetical protein XP_002348126 [Homo ... 32 0.29
gi|169212744 PREDICTED: hypothetical protein [Homo sapiens] 32 0.29
gi|24308547 hypothetical protein LOC196500 [Homo sapiens] 32 0.29
gi|239749693 PREDICTED: similar to hCG1806822 [Homo sapiens] 32 0.37
gi|168229174 RNA binding motif protein 27 [Homo sapiens] 32 0.37
gi|28872794 CCAAT/enhancer binding protein alpha [Homo sapiens] 32 0.49
gi|223972612 Crm, cramped-like [Homo sapiens] 31 0.64
gi|124378039 SEC16 homolog A [Homo sapiens] 31 0.64
gi|239753758 PREDICTED: hypothetical protein LOC401106 [Homo sap... 31 0.64
gi|169166137 PREDICTED: hypothetical protein LOC401106 [Homo sap... 31 0.64
gi|169165128 PREDICTED: hypothetical protein LOC401106 [Homo sap... 31 0.64
gi|217416343 fibrosin-like 1 [Homo sapiens] 31 0.64
gi|88853066 sperm associated antigen 8 isoform 1 [Homo sapiens] 31 0.64
gi|27734799 REST corepressor 2 [Homo sapiens] 31 0.64
gi|27502373 sperm associated antigen 8 isoform 2 [Homo sapiens] 31 0.64
gi|55750053 atrophin-1 [Homo sapiens] 31 0.83
>gi|239740767 PREDICTED: hypothetical protein [Homo sapiens]
Length = 204
Score = 421 bits (1081), Expect = e-118
Identities = 204/204 (100%), Positives = 204/204 (100%)
Query: 1 MRSRRGSGAMCSEVRELDAAGCRHSSALLFSLFSVLLGIAHHPPPALSGLFLHLLSSPLL 60
MRSRRGSGAMCSEVRELDAAGCRHSSALLFSLFSVLLGIAHHPPPALSGLFLHLLSSPLL
Sbjct: 1 MRSRRGSGAMCSEVRELDAAGCRHSSALLFSLFSVLLGIAHHPPPALSGLFLHLLSSPLL 60
Query: 61 RLLSLFGQTSPSEVPGFLGCSCEWHSRALPALPLRQPHPPVLRAALGSLKPCPLPGVRVF 120
RLLSLFGQTSPSEVPGFLGCSCEWHSRALPALPLRQPHPPVLRAALGSLKPCPLPGVRVF
Sbjct: 61 RLLSLFGQTSPSEVPGFLGCSCEWHSRALPALPLRQPHPPVLRAALGSLKPCPLPGVRVF 120
Query: 121 SAPGRAAVPGVGAFLFSGPGAGASYCCGDYGAPDSQAEGLESAGSRQRILPATAPIPSSL 180
SAPGRAAVPGVGAFLFSGPGAGASYCCGDYGAPDSQAEGLESAGSRQRILPATAPIPSSL
Sbjct: 121 SAPGRAAVPGVGAFLFSGPGAGASYCCGDYGAPDSQAEGLESAGSRQRILPATAPIPSSL 180
Query: 181 SLRLPFPGFFPLCQPSQLLWTPMI 204
SLRLPFPGFFPLCQPSQLLWTPMI
Sbjct: 181 SLRLPFPGFFPLCQPSQLLWTPMI 204
>gi|160333411 early B-cell factor 4 [Homo sapiens]
Length = 598
Score = 37.0 bits (84), Expect = 0.012
Identities = 37/118 (31%), Positives = 48/118 (40%), Gaps = 23/118 (19%)
Query: 90 PALPLR--QPHPPV---------LRAALGSLKPCPLPGVR--VFSAPGRAAVPGVGAFLF 136
P PL PHP V L A+G P P PG SA R P G+
Sbjct: 410 PLAPLAPSHPHPAVVGINAFSSPLAIAVGDATPGPEPGYARSCSSASPRGFAPSPGSQQ- 468
Query: 137 SGPGAGASYCCGDYGAPDSQAEGL---------ESAGSRQRILPATAPIPSSLSLRLP 185
SG G G G YGAP G+ +A S I+P++ P+ ++ S+ LP
Sbjct: 469 SGYGGGLGAGLGGYGAPGVAGLGVPGSPSFLNGSTATSPFAIMPSSPPLAAASSMSLP 526
>gi|150378545 POM121 membrane glycoprotein (rat)-like [Homo sapiens]
Length = 987
Score = 35.4 bits (80), Expect = 0.034
Identities = 40/156 (25%), Positives = 51/156 (32%), Gaps = 37/156 (23%)
Query: 44 PPALSGLFLHLLSSPLLRLLSLFGQTSPSEVPGFLGCSCEWHS-------------RALP 90
PPAL P ++ F Q+ P+ VP S S + P
Sbjct: 622 PPAL----------PTTTTVTTFSQSLPTAVPTATSSSAADFSGFGSTLATSAPATSSQP 671
Query: 91 ALPLRQPHPPVLRAALGSLKPCPLPGVRVFSAPGRAAVPGVGAFLFSGPGA--------- 141
L P GS PLP S PG P GA PGA
Sbjct: 672 TLTFSNTSTPTFNIPFGSSAKSPLP-----SYPGANPQPAFGAAEGQPPGAAKPALTPSF 726
Query: 142 GASYCCGDYGAPDSQAEGLESAGSRQRILPATAPIP 177
G+S+ G+ AP + S +I+PA P P
Sbjct: 727 GSSFTFGNSAAPAPATAPTPAPASTIKIVPAHVPTP 762
>gi|169214023 PREDICTED: hypothetical protein [Homo sapiens]
Length = 193
Score = 33.9 bits (76), Expect = 0.098
Identities = 31/101 (30%), Positives = 42/101 (41%), Gaps = 3/101 (2%)
Query: 87 RALPALPLRQPHPPVLRAALGSLKPCPLPGVRVFSAPG-RAAVPGVGAFLFS-GPGAGAS 144
R P P PP +++ P P G RV+ AP R A+ G A L + GP AG+
Sbjct: 56 RPQPKAPPSSAAPPTPHSSIPPRPPSPW-GPRVWGAPTHRPALKGTEAQLLAPGPAAGSG 114
Query: 145 YCCGDYGAPDSQAEGLESAGSRQRILPATAPIPSSLSLRLP 185
G + AE G + I P + + S S R P
Sbjct: 115 CWPELAGTESASAEREREGGGPRSIRPRPSLLSSGHSTRAP 155
>gi|169214468 PREDICTED: hypothetical protein [Homo sapiens]
Length = 193
Score = 33.9 bits (76), Expect = 0.098
Identities = 31/101 (30%), Positives = 42/101 (41%), Gaps = 3/101 (2%)
Query: 87 RALPALPLRQPHPPVLRAALGSLKPCPLPGVRVFSAPG-RAAVPGVGAFLFS-GPGAGAS 144
R P P PP +++ P P G RV+ AP R A+ G A L + GP AG+
Sbjct: 56 RPQPKAPPSSAAPPTPHSSIPPRPPSPW-GPRVWGAPTHRPALKGTEAQLLAPGPAAGSG 114
Query: 145 YCCGDYGAPDSQAEGLESAGSRQRILPATAPIPSSLSLRLP 185
G + AE G + I P + + S S R P
Sbjct: 115 CWPELAGTESASAEREREGGGPRSIRPRPSLLSSGHSTRAP 155
>gi|33519444 amiloride-sensitive cation channel 4 isoform 2 [Homo
sapiens]
Length = 647
Score = 33.9 bits (76), Expect = 0.098
Identities = 29/89 (32%), Positives = 39/89 (43%), Gaps = 7/89 (7%)
Query: 93 PLRQPHP-PVLRAALGSLKPCPLPGVRVFSAPGRAAVPGVGAFLFSGPGAGAS-----YC 146
P PHP PVL SL+ PLP + + APG A G G + P + C
Sbjct: 75 PTSGPHPVPVLFPLALSLEEQPLPPLPLGRAPGLLAREGQGREALASPSSRGQMPIEIVC 134
Query: 147 CGDYGAPDSQAEGLESAGSRQRILPATAP 175
+ D++ + E AG Q +L A AP
Sbjct: 135 KIKFAEEDAKPKEKE-AGDEQSLLGAVAP 162
>gi|33519442 amiloride-sensitive cation channel 4 isoform 1 [Homo
sapiens]
Length = 666
Score = 33.9 bits (76), Expect = 0.098
Identities = 29/89 (32%), Positives = 39/89 (43%), Gaps = 7/89 (7%)
Query: 93 PLRQPHP-PVLRAALGSLKPCPLPGVRVFSAPGRAAVPGVGAFLFSGPGAGAS-----YC 146
P PHP PVL SL+ PLP + + APG A G G + P + C
Sbjct: 75 PTSGPHPVPVLFPLALSLEEQPLPPLPLGRAPGLLAREGQGREALASPSSRGQMPIEIVC 134
Query: 147 CGDYGAPDSQAEGLESAGSRQRILPATAP 175
+ D++ + E AG Q +L A AP
Sbjct: 135 KIKFAEEDAKPKEKE-AGDEQSLLGAVAP 162
>gi|7662346 ADNP homeobox 2 [Homo sapiens]
Length = 1131
Score = 33.9 bits (76), Expect = 0.098
Identities = 34/102 (33%), Positives = 42/102 (41%), Gaps = 8/102 (7%)
Query: 38 GIAHHPPPALSGLFLHLLSSPLLRLLSLFGQTSPSEVPGFLGCSCEWH-SRALPALPLRQ 96
G H PPA + L+SSPL + P+ P FL H S P LPL Q
Sbjct: 317 GSLTHSPPAAGQSHMTLVSSPLPVGQNSLTLQPPAPQPVFLSHGVPLHQSVNPPVLPLSQ 376
Query: 97 PHPPVLRAALGSLKP---CPLPGVRVFSAP----GRAAVPGV 131
P PV ++ S+ P PGV + P R PGV
Sbjct: 377 PVGPVNKSVGTSVLPINQTVRPGVLPLTQPVGPINRPVGPGV 418
>gi|223972690 adenosine deaminase domain containing 2 isoform 2
[Homo sapiens]
Length = 583
Score = 33.5 bits (75), Expect = 0.13
Identities = 36/112 (32%), Positives = 45/112 (40%), Gaps = 13/112 (11%)
Query: 88 ALPALPLRQPHPPVLRAALGSLKPCPLPGVRVFSAPGRAAVPGVGAFLFSGPGAGASYCC 147
+L P +P P+ A + P P P + A G P V SGPGAGA
Sbjct: 22 SLQISPQPRPWRPLPAQAQSAWGPAPAPAT--YRAEG--GWPQVSVLRDSGPGAGAG--V 75
Query: 148 GDYGAPDSQAEGLESAGSRQRILPATAPIPSSLSLRLPFPGFFPLCQPSQLL 199
G+ GA A E+ G + P P+ LSL L P P Q LL
Sbjct: 76 GELGA----ARAWENLGEQMGKAPRVPVPPAGLSLPLKDP---PASQAVSLL 120
>gi|223972688 adenosine deaminase domain containing 2 isoform 1
[Homo sapiens]
Length = 665
Score = 33.5 bits (75), Expect = 0.13
Identities = 36/112 (32%), Positives = 45/112 (40%), Gaps = 13/112 (11%)
Query: 88 ALPALPLRQPHPPVLRAALGSLKPCPLPGVRVFSAPGRAAVPGVGAFLFSGPGAGASYCC 147
+L P +P P+ A + P P P + A G P V SGPGAGA
Sbjct: 22 SLQISPQPRPWRPLPAQAQSAWGPAPAPAT--YRAEG--GWPQVSVLRDSGPGAGAG--V 75
Query: 148 GDYGAPDSQAEGLESAGSRQRILPATAPIPSSLSLRLPFPGFFPLCQPSQLL 199
G+ GA A E+ G + P P+ LSL L P P Q LL
Sbjct: 76 GELGA----ARAWENLGEQMGKAPRVPVPPAGLSLPLKDP---PASQAVSLL 120
>gi|64084766 fidgetin [Homo sapiens]
Length = 759
Score = 33.1 bits (74), Expect = 0.17
Identities = 33/121 (27%), Positives = 45/121 (37%), Gaps = 13/121 (10%)
Query: 67 GQTSPSEVPGFLGCSCEWHSRALPALPLRQPHPPVLRAALGSLKPCPLPGVRVFSAPGRA 126
G S PG+ G + PA L PHP L ++ G L+P P P P A
Sbjct: 179 GLPSQEYAPGYNGSYLHSTYSSQPAPALPSPHPSPLHSS-GLLQPPPPP------PPPPA 231
Query: 127 AVPGVGAFLFSGPGAGASYCCGDYGAPDSQAEGLESAGSRQRILPATAPIPSSLSLRLPF 186
VPG + + SY Y + G G+ P +A +PS + P
Sbjct: 232 LVPGYNG---TSNLSSYSYPSASYPPQTAVGSGYSPGGAPP---PPSAYLPSGIPAPTPL 285
Query: 187 P 187
P
Sbjct: 286 P 286
>gi|56676337 transmembrane protein 28 [Homo sapiens]
Length = 472
Score = 33.1 bits (74), Expect = 0.17
Identities = 27/83 (32%), Positives = 30/83 (36%), Gaps = 6/83 (7%)
Query: 95 RQPHPPVLRAALGSLKPCPLPGVRVFSAPGRAAVPGVGAFLFSGPGAGASYCCGDYGAPD 154
RQP PP RA L P P P SAP P + P AG+ CG P
Sbjct: 88 RQPVPP--RAVL----PLPPPPPGEPSAPPGTCGPRYSNLTKAAPAAGSRPVCGGVPEPT 141
Query: 155 SQAEGLESAGSRQRILPATAPIP 177
S QR+ T P P
Sbjct: 142 GLDAACTKLQSLQRLFEPTTPAP 164
>gi|72004269 tetra-peptide repeat homeobox [Homo sapiens]
Length = 411
Score = 33.1 bits (74), Expect = 0.17
Identities = 38/129 (29%), Positives = 48/129 (37%), Gaps = 12/129 (9%)
Query: 68 QTSPSEVPGFLGCSCEWHSRALPALPLRQPHPPVLRAALGSLKPCPLPGV----RVFSAP 123
Q P VPG G +RA P +P P R G L P P + + + P
Sbjct: 27 QQQPQRVPGQRGRG----ARAAPLVPAASASAPQ-RGPSGIL-PAAEPTICSLHQAWGGP 80
Query: 124 GRAAVPGVGAFLFSGPGAGASYCCGDYGAPDSQAEGLES--AGSRQRILPATAPIPSSLS 181
G A G+ A L GPG + G P + G Q P APIP +S
Sbjct: 81 GCRAQKGIPAALSPGPGPIPAPIPGPAQIPGPLPGSIPGPIPGPAQIPSPIPAPIPGPIS 140
Query: 182 LRLPFPGFF 190
+ PG F
Sbjct: 141 GPVQIPGPF 149
Score = 29.3 bits (64), Expect = 2.4
Identities = 30/116 (25%), Positives = 43/116 (37%), Gaps = 12/116 (10%)
Query: 92 LPLRQPHPPVLRAALGSLKPCPLPGVRVFSAPGRAAVPG--------VGAFL--FSGPGA 141
+P P P + L P P+PG +P A +PG G F GP +
Sbjct: 99 IPAPIPGPAQIPGPLPGSIPGPIPGPAQIPSPIPAPIPGPISGPVQIPGPFRGPIPGPIS 158
Query: 142 GASYCCGDYGAPDSQAEGLESAGSRQRILPA--TAPIPSSLSLRLPFPGFFPLCQP 195
G + G P S G +P + PIP +S+ +P P P+ P
Sbjct: 159 GPAPIPGPISGPFSGPNPGPIPGPNPGPIPGPISGPIPGPISVPIPGPIPGPISGP 214
Score = 27.7 bits (60), Expect = 7.1
Identities = 32/112 (28%), Positives = 42/112 (37%), Gaps = 26/112 (23%)
Query: 93 PLRQPHPPVLRAALGSLKPCPLPGVRVFSAPGRAAVPGVGAFLFSGPGAGASYCCGDYGA 152
P+ P+P ++ + P PG + P A +PG G GPG
Sbjct: 242 PISGPNPGLIPGPIPG--PISGPGPIIGPIPSPAQIPGPGR--LQGPG------------ 285
Query: 153 PDSQAEGLESAGSRQRILPATAPI------PSSLSLRLPFPGFFPLCQPSQL 198
P + S GS LP API P S S+ P PG L P+ L
Sbjct: 286 PILSPGRMRSPGS----LPGLAPILGPGSGPGSGSVPAPIPGPGSLPAPAPL 333
>gi|169213235 PREDICTED: hypothetical protein [Homo sapiens]
Length = 308
Score = 32.3 bits (72), Expect = 0.29
Identities = 32/124 (25%), Positives = 44/124 (35%), Gaps = 7/124 (5%)
Query: 76 GFLGCSCEWHSRALPALPLRQPHPPVLRAALGSLKPCPLPGVRVFSAPGRAAVPGVG--- 132
G G + R A+ P P+ R + P P P P R+ P G
Sbjct: 36 GAAGAGSKLWRRPRGAVSAGAPGSPLYRVSAPPPAPPPPPPP---GGPSRSERPRAGLRP 92
Query: 133 -AFLFSGPGAGASYCCGDYGAPDSQAEGLESAGSRQRILPATAPIPSSLSLRLPFPGFFP 191
AF+ GP + C G G+ + + QR PA A +P +L P P P
Sbjct: 93 GAFVSPGPLGRRASCSGRAGSAGRLRCSAAALSAAQRGGPARAQVPPALRTFSPGPASPP 152
Query: 192 LCQP 195
P
Sbjct: 153 RASP 156
>gi|239747654 PREDICTED: hypothetical protein XP_002348126 [Homo
sapiens]
Length = 1032
Score = 32.3 bits (72), Expect = 0.29
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPG 140
PG + S+PG+A V G+G + SGPG
Sbjct: 946 PGKAIVSSPGKAIVSGLGKAIVSGPG 971
Score = 32.0 bits (71), Expect = 0.37
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPG 140
PG + S PG+A V G+G + SGPG
Sbjct: 169 PGKAIVSGPGKAIVSGLGKAIVSGPG 194
Score = 32.0 bits (71), Expect = 0.37
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPG 140
PG + S PG+A V G+G + SGPG
Sbjct: 321 PGKAIVSGPGKAIVSGLGKAIVSGPG 346
Score = 31.6 bits (70), Expect = 0.49
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 104 AALGSLKPCPLPGVRVFSAPGRAAVPGVGAFLFSGPG 140
++LG C L G + S PG+A V G+G + SGPG
Sbjct: 239 SSLGKAIVCSL-GKAIVSGPGKAIVSGLGKAIVSGPG 274
Score = 31.6 bits (70), Expect = 0.49
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 104 AALGSLKPCPLPGVRVFSAPGRAAVPGVGAFLFSGPG 140
++LG C L G + S PG+A V G+G + SGPG
Sbjct: 391 SSLGKAIVCSL-GKAIVSGPGKAIVSGLGKAIVSGPG 426
Score = 31.2 bits (69), Expect = 0.64
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPG 140
PG + S+PG+A V G G + SGPG
Sbjct: 569 PGKAIVSSPGKAIVSGPGKAIVSGPG 594
Score = 30.8 bits (68), Expect = 0.83
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPG 140
PG + S PG+A V G G + SGPG
Sbjct: 33 PGKAIVSGPGKAIVSGPGKAIVSGPG 58
Score = 30.8 bits (68), Expect = 0.83
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPG 140
PG + S PG+A V G G + SGPG
Sbjct: 41 PGKAIVSGPGKAIVSGPGKAIVSGPG 66
Score = 30.8 bits (68), Expect = 0.83
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPG 140
PG + S PG+A V G G + SGPG
Sbjct: 49 PGKAIVSGPGKAIVSGPGKAIVSGPG 74
Score = 30.8 bits (68), Expect = 0.83
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPG 140
PG + S PG+A V G G + SGPG
Sbjct: 57 PGKAIVSGPGKAIVSGPGKAIVSGPG 82
Score = 30.8 bits (68), Expect = 0.83
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPG 140
PG + S PG+A V G G + SGPG
Sbjct: 65 PGKAIVSGPGKAIVSGPGKAIVSGPG 90
Score = 30.8 bits (68), Expect = 0.83
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPG 140
PG + S PG+A V G G + SGPG
Sbjct: 73 PGKAIVSGPGKAIVSGPGKAIVSGPG 98
Score = 30.8 bits (68), Expect = 0.83
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPG 140
PG + S PG+A V G G + SGPG
Sbjct: 81 PGKAIVSGPGKAIVSGPGKAIVSGPG 106
Score = 30.8 bits (68), Expect = 0.83
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPG 140
PG + S PG+A V G G + SGPG
Sbjct: 89 PGKAIVSGPGKAIVSGPGKAIVSGPG 114
Score = 30.8 bits (68), Expect = 0.83
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPG 140
PG + S PG+A V G G + SGPG
Sbjct: 97 PGKAIVSGPGKAIVSGPGKAIVSGPG 122
Score = 30.8 bits (68), Expect = 0.83
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPG 140
PG + S PG+A V G G + SGPG
Sbjct: 105 PGKAIVSGPGKAIVSGPGKAIVSGPG 130
Score = 30.8 bits (68), Expect = 0.83
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPG 140
PG + S PG+A V G G + SGPG
Sbjct: 113 PGKAIVSGPGKAIVSGPGKAIVSGPG 138
Score = 30.8 bits (68), Expect = 0.83
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPG 140
PG + S PG+A V G G + SGPG
Sbjct: 121 PGKAIVSGPGKAIVSGPGKAIVSGPG 146
Score = 30.8 bits (68), Expect = 0.83
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPG 140
PG + S PG+A V G G + SGPG
Sbjct: 129 PGKAIVSGPGKAIVSGPGKAIVSGPG 154
Score = 30.8 bits (68), Expect = 0.83
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPG 140
PG + S PG+A V G G + SGPG
Sbjct: 137 PGKAIVSGPGKAIVSGPGKAIVSGPG 162
Score = 30.8 bits (68), Expect = 0.83
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPG 140
PG + S PG+A V G G + SGPG
Sbjct: 145 PGKAIVSGPGKAIVSGPGKAIVSGPG 170
Score = 30.8 bits (68), Expect = 0.83
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPG 140
PG + S PG+A V G G + SGPG
Sbjct: 153 PGKAIVSGPGKAIVSGPGKAIVSGPG 178
Score = 30.8 bits (68), Expect = 0.83
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPG 140
PG + S PG+A V G G + SGPG
Sbjct: 273 PGKAIVSGPGKAIVSGPGKAIVSGPG 298
Score = 30.8 bits (68), Expect = 0.83
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPG 140
PG + S PG+A V G G + SGPG
Sbjct: 281 PGKAIVSGPGKAIVSGPGKAIVSGPG 306
Score = 30.8 bits (68), Expect = 0.83
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPG 140
PG + S PG+A V G G + SGPG
Sbjct: 289 PGKAIVSGPGKAIVSGPGKAIVSGPG 314
Score = 30.8 bits (68), Expect = 0.83
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPG 140
PG + S PG+A V G G + SGPG
Sbjct: 297 PGKAIVSGPGKAIVSGPGKAIVSGPG 322
Score = 30.8 bits (68), Expect = 0.83
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPG 140
PG + S PG+A V G G + SGPG
Sbjct: 305 PGKAIVSGPGKAIVSGPGKAIVSGPG 330
Score = 30.8 bits (68), Expect = 0.83
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPG 140
PG + S PG+A V G G + SGPG
Sbjct: 425 PGKAIVSGPGKAIVSGPGKAIVSGPG 450
Score = 30.8 bits (68), Expect = 0.83
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPG 140
PG + S PG+A V G G + SGPG
Sbjct: 433 PGKAIVSGPGKAIVSGPGKAIVSGPG 458
Score = 30.8 bits (68), Expect = 0.83
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPG 140
PG + S PG+A V G G + SGPG
Sbjct: 481 PGKAIVSGPGKAIVSGPGKAIVSGPG 506
Score = 30.8 bits (68), Expect = 0.83
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPG 140
PG + S PG+A V G G + SGPG
Sbjct: 577 PGKAIVSGPGKAIVSGPGKAIVSGPG 602
Score = 30.8 bits (68), Expect = 0.83
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPG 140
PG + S PG+A V G G + SGPG
Sbjct: 585 PGKAIVSGPGKAIVSGPGKAIVSGPG 610
Score = 30.8 bits (68), Expect = 0.83
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPG 140
PG + S PG+A V G G + SGPG
Sbjct: 874 PGKAIVSGPGKAIVSGPGKAIVSGPG 899
Score = 30.8 bits (68), Expect = 0.83
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPG 140
PG + S PG+A V G G + SGPG
Sbjct: 882 PGKAIVSGPGKAIVSGPGKAIVSGPG 907
Score = 30.8 bits (68), Expect = 0.83
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPG 140
PG + S PG+A V G G + SGPG
Sbjct: 890 PGKAIVSGPGKAIVSGPGKAIVSGPG 915
Score = 30.8 bits (68), Expect = 0.83
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPG 140
PG + S PG+A V G G + SGPG
Sbjct: 898 PGKAIVSGPGKAIVSGPGKAIVSGPG 923
Score = 30.8 bits (68), Expect = 0.83
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPG 140
PG + S PG+A V G G + SGPG
Sbjct: 906 PGKAIVSGPGKAIVSGPGKAIVSGPG 931
Score = 30.8 bits (68), Expect = 0.83
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPG 140
PG + S PG+A V G G + SGPG
Sbjct: 914 PGKAIVSGPGKAIVSGPGKAIVSGPG 939
Score = 30.8 bits (68), Expect = 0.83
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPG 140
PG + S PG+A V G G + SGPG
Sbjct: 922 PGKAIVSGPGKAIVSGPGKAIVSGPG 947
Score = 30.8 bits (68), Expect = 0.83
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPG 140
PG + S PG+A V G G + SGPG
Sbjct: 970 PGKAIVSGPGKAIVSGPGKAIVSGPG 995
Score = 30.4 bits (67), Expect = 1.1
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 104 AALGSLKPCPLPGVRVFSAPGRAAVPGVGAFLFSGPG 140
++LG C L G + S PG+A V G G + SGPG
Sbjct: 463 SSLGKAIVCSL-GKAIVSGPGKAIVSGPGKAIVSGPG 498
Score = 30.0 bits (66), Expect = 1.4
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPG 140
PG + S+PG+A V +G + SGPG
Sbjct: 665 PGKAIVSSPGKAIVSSLGKAIVSGPG 690
Score = 30.0 bits (66), Expect = 1.4
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPG 140
PG + S+PG+A V +G + SGPG
Sbjct: 705 PGKAIVSSPGKAIVSSLGKAIVSGPG 730
Score = 30.0 bits (66), Expect = 1.4
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPG 140
PG + S+PG+A V G+G + S PG
Sbjct: 777 PGKAIVSSPGKAIVSGLGKAIVSSPG 802
Score = 28.9 bits (63), Expect = 3.2
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPG 140
PG + S+PG+A V G G + S PG
Sbjct: 609 PGKAIVSSPGKAIVSGPGKAIVSSPG 634
Score = 28.9 bits (63), Expect = 3.2
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPG 140
PG + S+PG+A V G G + S PG
Sbjct: 729 PGKAIVSSPGKAIVSGPGKAIVSSPG 754
Score = 28.9 bits (63), Expect = 3.2
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPG 140
PG + S+PG+A V G + SGPG
Sbjct: 745 PGKAIVSSPGKAIVSSPGKAIVSGPG 770
Score = 28.9 bits (63), Expect = 3.2
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPG 140
PG + S+PG+A V G G + S PG
Sbjct: 753 PGKAIVSSPGKAIVSGPGKAIVSSPG 778
Score = 28.5 bits (62), Expect = 4.1
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPG 140
PG + S PG+A V G G + S PG
Sbjct: 593 PGKAIVSGPGKAIVSGPGKAIVSSPG 618
Score = 28.5 bits (62), Expect = 4.1
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPG 140
PG + S PG+A V G + SGPG
Sbjct: 601 PGKAIVSGPGKAIVSSPGKAIVSGPG 626
Score = 28.5 bits (62), Expect = 4.1
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPG 140
PG + S PG+A V G G + S PG
Sbjct: 689 PGKAIVSGPGKAIVSGPGKAIVSSPG 714
Score = 28.5 bits (62), Expect = 4.1
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPG 140
PG + S PG+A V G G + S PG
Sbjct: 930 PGKAIVSGPGKAIVSGPGKAIVSSPG 955
Score = 28.5 bits (62), Expect = 4.1
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPG 140
PG + S PG+A V G G + S PG
Sbjct: 978 PGKAIVSGPGKAIVSGPGKAIVSSPG 1003
Score = 28.1 bits (61), Expect = 5.4
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 116 GVRVFSAPGRAAVPGVGAFLFSGPG 140
G + S PG+A V G G + SGPG
Sbjct: 210 GKAIVSGPGKAIVSGPGKAIVSGPG 234
Score = 28.1 bits (61), Expect = 5.4
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 116 GVRVFSAPGRAAVPGVGAFLFSGPG 140
G + S PG+A V G G + SGPG
Sbjct: 266 GKAIVSGPGKAIVSGPGKAIVSGPG 290
Score = 28.1 bits (61), Expect = 5.4
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 116 GVRVFSAPGRAAVPGVGAFLFSGPG 140
G + S PG+A V G G + SGPG
Sbjct: 362 GKAIVSGPGKAIVSGPGKAIVSGPG 386
Score = 28.1 bits (61), Expect = 5.4
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 116 GVRVFSAPGRAAVPGVGAFLFSGPG 140
G + S PG+A V G G + SGPG
Sbjct: 418 GKAIVSGPGKAIVSGPGKAIVSGPG 442
Score = 28.1 bits (61), Expect = 5.4
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 116 GVRVFSAPGRAAVPGVGAFLFSGPG 140
G + S PG+A V G G + SGPG
Sbjct: 682 GKAIVSGPGKAIVSGPGKAIVSGPG 706
Score = 28.1 bits (61), Expect = 5.4
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 116 GVRVFSAPGRAAVPGVGAFLFSGPG 140
G + S PG+A V G G + SGPG
Sbjct: 963 GKAIVSGPGKAIVSGPGKAIVSGPG 987
Score = 27.7 bits (60), Expect = 7.1
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPG 140
P + S PG+A V G G + SGPG
Sbjct: 25 PPKAIVSGPGKAIVSGPGKAIVSGPG 50
Score = 27.7 bits (60), Expect = 7.1
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPG 140
P + S PG+A V G G + SGPG
Sbjct: 866 PPKAIVSGPGKAIVSGPGKAIVSGPG 891
Score = 27.3 bits (59), Expect = 9.2
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPG 140
PG + S+ G+A V G G + SGPG
Sbjct: 673 PGKAIVSSLGKAIVSGPGKAIVSGPG 698
>gi|169212744 PREDICTED: hypothetical protein [Homo sapiens]
Length = 308
Score = 32.3 bits (72), Expect = 0.29
Identities = 32/124 (25%), Positives = 44/124 (35%), Gaps = 7/124 (5%)
Query: 76 GFLGCSCEWHSRALPALPLRQPHPPVLRAALGSLKPCPLPGVRVFSAPGRAAVPGVG--- 132
G G + R A+ P P+ R + P P P P R+ P G
Sbjct: 36 GAAGAGSKLWRRPRGAVSAGAPGSPLYRVSAPPPAPPPPPPP---GGPSRSERPRAGLRP 92
Query: 133 -AFLFSGPGAGASYCCGDYGAPDSQAEGLESAGSRQRILPATAPIPSSLSLRLPFPGFFP 191
AF+ GP + C G G+ + + QR PA A +P +L P P P
Sbjct: 93 GAFVSPGPLGRRASCSGRAGSAGRLRCSAAALSAAQRGGPARAQVPPALRTFSPGPASPP 152
Query: 192 LCQP 195
P
Sbjct: 153 RASP 156
>gi|24308547 hypothetical protein LOC196500 [Homo sapiens]
Length = 282
Score = 32.3 bits (72), Expect = 0.29
Identities = 35/123 (28%), Positives = 48/123 (39%), Gaps = 17/123 (13%)
Query: 86 SRALPALPLRQPHP--PVLRAALGSLKPCPLPGVRVFSAPGRAAVPGVGAFLFSGPGAGA 143
SR PAL L P P+L L P P P S+P P GP A
Sbjct: 3 SRMWPALLLSHLLPLWPLL------LLPLPPPAQGSSSSPRTPPAPARPPCARGGPSAPR 56
Query: 144 SYCCGDYGAPDSQAEGLESAGSRQRILPATAP--IPSSLSLRLPFPGFFPLCQPSQLLWT 201
C + P S++ + SR+++LP TAP PS P + P ++W
Sbjct: 57 HVCVWERAPPPSRSPRVPR--SRRQVLPGTAPPATPSGFEEGPPSSQY-----PWAIVWG 109
Query: 202 PMI 204
P +
Sbjct: 110 PTV 112
>gi|239749693 PREDICTED: similar to hCG1806822 [Homo sapiens]
Length = 1180
Score = 32.0 bits (71), Expect = 0.37
Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 9/78 (11%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPGAGASYC--CGDYGAPDS-------QAEGLESAGS 165
PG VF +PG A GA +F PGA C Y +P++ + E + +
Sbjct: 995 PGAAVFRSPGAAVYRSPGAAVFRSPGAAVFRCPEAAVYHSPEATVYPAWRRGESDSAETN 1054
Query: 166 RQRILPATAPIPSSLSLR 183
Q P P P SLR
Sbjct: 1055 FQDRTPIGGPGPRGPSLR 1072
Score = 30.0 bits (66), Expect = 1.4
Identities = 14/34 (41%), Positives = 17/34 (50%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPGAGASYCCG 148
PG VF +PG A GA +F PGA + G
Sbjct: 310 PGAAVFHSPGAAVFHSPGAAVFHSPGAAVFHSPG 343
Score = 30.0 bits (66), Expect = 1.4
Identities = 14/34 (41%), Positives = 17/34 (50%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPGAGASYCCG 148
PG VF +PG A GA +F PGA + G
Sbjct: 318 PGAAVFHSPGAAVFHSPGAAVFHSPGAAVYHSPG 351
Score = 30.0 bits (66), Expect = 1.4
Identities = 14/34 (41%), Positives = 17/34 (50%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPGAGASYCCG 148
PG VF +PG A GA +F PGA + G
Sbjct: 438 PGAAVFHSPGAAVYHSPGAAVFHSPGAAVYHSPG 471
Score = 30.0 bits (66), Expect = 1.4
Identities = 14/34 (41%), Positives = 17/34 (50%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPGAGASYCCG 148
PG VF +PG A GA +F PGA + G
Sbjct: 478 PGAAVFHSPGAAVYHSPGAAVFHSPGAAVYHSPG 511
Score = 29.3 bits (64), Expect = 2.4
Identities = 13/27 (48%), Positives = 15/27 (55%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPGA 141
PG VF +PG A GA +F PGA
Sbjct: 494 PGAAVFHSPGAAVYHSPGAAVFHSPGA 520
Score = 29.3 bits (64), Expect = 2.4
Identities = 13/27 (48%), Positives = 15/27 (55%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPGA 141
PG VF +PG A GA +F PGA
Sbjct: 510 PGAAVFHSPGAAVYRSPGAAVFRSPGA 536
Score = 29.3 bits (64), Expect = 2.4
Identities = 13/27 (48%), Positives = 15/27 (55%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPGA 141
PG VF +PG A GA +F PGA
Sbjct: 526 PGAAVFRSPGAAVYRSPGAAVFRSPGA 552
Score = 29.3 bits (64), Expect = 2.4
Identities = 13/27 (48%), Positives = 15/27 (55%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPGA 141
PG VF +PG A GA +F PGA
Sbjct: 542 PGAAVFRSPGAAVYRSPGAAVFRSPGA 568
Score = 29.3 bits (64), Expect = 2.4
Identities = 13/27 (48%), Positives = 15/27 (55%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPGA 141
PG VF +PG A GA +F PGA
Sbjct: 622 PGAAVFRSPGAAVYRSPGAAVFRSPGA 648
Score = 29.3 bits (64), Expect = 2.4
Identities = 13/27 (48%), Positives = 15/27 (55%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPGA 141
PG VF +PG A GA +F PGA
Sbjct: 947 PGAAVFRSPGAAVYRSPGAAVFRSPGA 973
Score = 29.3 bits (64), Expect = 2.4
Identities = 13/27 (48%), Positives = 15/27 (55%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPGA 141
PG VF +PG A GA +F PGA
Sbjct: 963 PGAAVFRSPGAAVYRSPGAAVFRSPGA 989
Score = 29.3 bits (64), Expect = 2.4
Identities = 13/27 (48%), Positives = 15/27 (55%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPGA 141
PG VF +PG A GA +F PGA
Sbjct: 979 PGAAVFRSPGAAVYRSPGAAVFRSPGA 1005
Score = 28.9 bits (63), Expect = 3.2
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPGAGASYCCG 148
PG VF +PG A GA ++ PGA + G
Sbjct: 262 PGAAVFHSPGAAVYHSPGAAVYHSPGAAVYHSPG 295
Score = 28.9 bits (63), Expect = 3.2
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPGAGASYCCG 148
PG V+ +PG A GA +F PGA + G
Sbjct: 294 PGAAVYHSPGAAVYHSPGAAVFHSPGAAVFHSPG 327
Score = 28.9 bits (63), Expect = 3.2
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPGAGASYCCG 148
PG V+ +PG A GA +F PGA + G
Sbjct: 302 PGAAVYHSPGAAVFHSPGAAVFHSPGAAVFHSPG 335
Score = 28.9 bits (63), Expect = 3.2
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPGAGASYCCG 148
PG VF +PG A GA ++ PGA + G
Sbjct: 326 PGAAVFHSPGAAVFHSPGAAVYHSPGAAVYHSPG 359
Score = 28.9 bits (63), Expect = 3.2
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPGAGASYCCG 148
PG VF +PG A GA ++ PGA + G
Sbjct: 454 PGAAVFHSPGAAVYHSPGAAVYHSPGAAVFHSPG 487
Score = 28.9 bits (63), Expect = 3.2
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPGAGASYCCG 148
PG V+ +PG A GA +F PGA + G
Sbjct: 462 PGAAVYHSPGAAVYHSPGAAVFHSPGAAVYHSPG 495
Score = 28.1 bits (61), Expect = 5.4
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPGA 141
PG VF +PG A GA ++ PGA
Sbjct: 334 PGAAVFHSPGAAVYHSPGAAVYHSPGA 360
Score = 28.1 bits (61), Expect = 5.4
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPGA 141
PG V+ +PG A GA +F PGA
Sbjct: 342 PGAAVYHSPGAAVYHSPGAAVFRSPGA 368
Score = 28.1 bits (61), Expect = 5.4
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPGA 141
PG V+ +PG A GA +F PGA
Sbjct: 350 PGAAVYHSPGAAVFRSPGAAVFRSPGA 376
Score = 28.1 bits (61), Expect = 5.4
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPGA 141
PG VF +PG A GA ++ PGA
Sbjct: 558 PGAAVFRSPGAAVYRSPGAAVYRSPGA 584
Score = 28.1 bits (61), Expect = 5.4
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPGA 141
PG V+ +PG A GA +F PGA
Sbjct: 606 PGAAVYRSPGAAVYRSPGAAVFRSPGA 632
Score = 28.1 bits (61), Expect = 5.4
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPGA 141
PG VF +PG A GA ++ PGA
Sbjct: 638 PGAAVFRSPGAAVYRSPGAAVYRSPGA 664
Score = 28.1 bits (61), Expect = 5.4
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPGA 141
PG V+ +PG A GA +F PGA
Sbjct: 654 PGAAVYRSPGAAVYRSPGAAVFRSPGA 680
Score = 28.1 bits (61), Expect = 5.4
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPGA 141
PG VF +PG A GA ++ PGA
Sbjct: 670 PGAAVFRSPGAAVYRSPGAAVYRSPGA 696
Score = 28.1 bits (61), Expect = 5.4
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPGA 141
PG VF +PG A GA ++ PGA
Sbjct: 883 PGAAVFHSPGAAVFHSPGAAVYRSPGA 909
Score = 28.1 bits (61), Expect = 5.4
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPGA 141
PG VF +PG A GA ++ PGA
Sbjct: 891 PGAAVFHSPGAAVYRSPGAAVYRSPGA 917
Score = 28.1 bits (61), Expect = 5.4
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPGA 141
PG V+ +PG A GA +F PGA
Sbjct: 923 PGAAVYRSPGAAVYRSPGAAVFRSPGA 949
Score = 28.1 bits (61), Expect = 5.4
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPGA 141
PG V+ +PG A GA +F PGA
Sbjct: 931 PGAAVYRSPGAAVFRSPGAAVFRSPGA 957
Score = 28.1 bits (61), Expect = 5.4
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPGA 141
PG VF +PG A GA ++ PGA
Sbjct: 939 PGAAVFRSPGAAVFRSPGAAVYRSPGA 965
Score = 27.7 bits (60), Expect = 7.1
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPGAGASYCCG 148
PG V+ +PG A GA ++ PGA + G
Sbjct: 270 PGAAVYHSPGAAVYHSPGAAVYHSPGAAVYHSPG 303
Score = 27.7 bits (60), Expect = 7.1
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPGAGASYCCG 148
PG V+ +PG A GA ++ PGA + G
Sbjct: 278 PGAAVYHSPGAAVYHSPGAAVYHSPGAAVYHSPG 311
Score = 27.7 bits (60), Expect = 7.1
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPGAGASYCCG 148
PG V+ +PG A GA ++ PGA + G
Sbjct: 286 PGAAVYHSPGAAVYHSPGAAVYHSPGAAVFHSPG 319
Score = 27.7 bits (60), Expect = 7.1
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPGAGASYCCG 148
PG V+ +PG A GA ++ PGA + G
Sbjct: 446 PGAAVYHSPGAAVFHSPGAAVYHSPGAAVYHSPG 479
Score = 27.7 bits (60), Expect = 7.1
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPGAGASYCCG 148
PG V+ +PG A GA ++ PGA + G
Sbjct: 470 PGAAVYHSPGAAVFHSPGAAVYHSPGAAVFHSPG 503
Score = 27.7 bits (60), Expect = 7.1
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 115 PGVRVFSAPGRAAVPGVGAFLFSGPGAGASYCCG 148
PG V+ +PG A GA ++ PGA + G
Sbjct: 486 PGAAVYHSPGAAVFHSPGAAVYHSPGAAVFHSPG 519
>gi|168229174 RNA binding motif protein 27 [Homo sapiens]
Length = 1060
Score = 32.0 bits (71), Expect = 0.37
Identities = 37/131 (28%), Positives = 49/131 (37%), Gaps = 33/131 (25%)
Query: 88 ALPALPLRQPHPPVLRAALGSLKPCPLPGVRVFSAPGRAAVPGVGAFLFSGPGAGASYCC 147
ALP++ P PP L P P PG+ + PG PG G GPG G +
Sbjct: 309 ALPSMIPFPPPPP-------GLPPPPPPGMLMPPMPGPGPGPGPGPGPGPGPGPGPGH-- 359
Query: 148 GDYGAPDSQAEG---------------LESAGSRQRILPATAPIP--SSLSLRLPFPGFF 190
P Q G +S+ R P T+ +P +S+ RLP P
Sbjct: 360 -SMRLPVPQGHGQPPPSVVLPIPRPPITQSSLINSRDQPGTSAVPNLASVGTRLPPP--- 415
Query: 191 PLCQPSQLLWT 201
P LL+T
Sbjct: 416 ---LPQNLLYT 423
>gi|28872794 CCAAT/enhancer binding protein alpha [Homo sapiens]
Length = 358
Score = 31.6 bits (70), Expect = 0.49
Identities = 35/127 (27%), Positives = 47/127 (37%), Gaps = 45/127 (35%)
Query: 42 HPPPALSGLFLHLLSSPLLRLLSLFGQTSPSEVPGFLGCSCEWHSRALPALPLRQPHPPV 101
HPPPA HL + L ++ GQT+ PG P PP
Sbjct: 195 HPPPA------HLAAPHLQFQIAHCGQTTMHLQPG-------------------HPTPP- 228
Query: 102 LRAALGSLKPCPLPGVRVFSAPGRAAVPGVGAFLFSGPGAGASYCCGDYGAPDSQAEGLE 161
P P+P A G A +PG G+ L G GA++ PD +A G
Sbjct: 229 ---------PTPVPSPHPAPALGAAGLPGPGSAL---KGLGAAH-------PDLRASGGS 269
Query: 162 SAGSRQR 168
AG ++
Sbjct: 270 GAGKAKK 276
>gi|223972612 Crm, cramped-like [Homo sapiens]
Length = 1269
Score = 31.2 bits (69), Expect = 0.64
Identities = 40/142 (28%), Positives = 49/142 (34%), Gaps = 27/142 (19%)
Query: 43 PPPALSGLFLHLLSSPLLRLLSLFGQTSPSEVPGFLGCSCEWHSRALPALPLRQPHPPVL 102
PPP H + P L G+ SP+ PG L C+C L L P P L
Sbjct: 512 PPPR------HQDTGPCLEKTPAEGRDSPTREPGALPCACGQLPDLEDELSLLDPLPRYL 565
Query: 103 RAALGSLKP--CPLPGVRVFSAP---GRAAVPGV--------------GAFLFSGPGAGA 143
++ + P C R S G AA P V G GPG
Sbjct: 566 KSCQDLIVPEQCRCADTRPGSEQPPLGGAASPEVLAPVSKEAADLAPTGPSPRPGPGLLL 625
Query: 144 SYCCGDYGAPDSQAEGLESAGS 165
C D D+ AE L+ GS
Sbjct: 626 DVCTKDLA--DAPAEELQEKGS 645
>gi|124378039 SEC16 homolog A [Homo sapiens]
Length = 2357
Score = 31.2 bits (69), Expect = 0.64
Identities = 30/99 (30%), Positives = 39/99 (39%), Gaps = 11/99 (11%)
Query: 87 RALPALPLRQPHPPVLRAALGSLKPCPLPGVRVFSAPGRAAV-PGVGAFLFSGPGAGASY 145
R LP+ P P P+ A + P PLP + PG P +G SGPG
Sbjct: 1948 RLLPSAPQTLPDGPLASPARVPMFPVPLPPGPLEPGPGCVTPGPALGFLEPSGPGLPP-- 2005
Query: 146 CCGDYGAPDSQAEG---LESAGSRQRILPATAPIPSSLS 181
G P Q E+ I+P AP+ +SLS
Sbjct: 2006 -----GVPPLQERRHLLQEARSPDPGIVPQEAPVGNSLS 2039
>gi|239753758 PREDICTED: hypothetical protein LOC401106 [Homo
sapiens]
Length = 297
Score = 31.2 bits (69), Expect = 0.64
Identities = 42/149 (28%), Positives = 44/149 (29%), Gaps = 41/149 (27%)
Query: 86 SRALPALPLRQPHPPVLRAALGSLK------PCPLP------------------------ 115
+RA LP R P PP+ A L K P P P
Sbjct: 131 ARAGSGLPRRMPRPPIAFATLERAKERKRQPPSPPPKQTDKKLSFSYDHGLCAPAAGGGQ 190
Query: 116 -GVRVFSAPGRAAVPGVGAFLFSGPGAGASY------CCGDYGAPDSQAEGLESAGSRQR 168
G P A P G LF Y G PD Q GL A S R
Sbjct: 191 GGAHTRKLPRARASPPTGRRLFRPSWMQIKYFPPQKTYLGVGPQPDFQIAGLIFAASSPR 250
Query: 169 ILPATAPIPSSLSLRLPF----PGFFPLC 193
P SL LR F PG PLC
Sbjct: 251 RAQGARPATCSLWLRPSFRLGPPGLRPLC 279
>gi|169166137 PREDICTED: hypothetical protein LOC401106 [Homo
sapiens]
Length = 297
Score = 31.2 bits (69), Expect = 0.64
Identities = 42/149 (28%), Positives = 44/149 (29%), Gaps = 41/149 (27%)
Query: 86 SRALPALPLRQPHPPVLRAALGSLK------PCPLP------------------------ 115
+RA LP R P PP+ A L K P P P
Sbjct: 131 ARAGSGLPRRMPRPPIAFATLERAKERKRQPPSPPPKQTDKKLSFSYDHGLCAPAAGGGQ 190
Query: 116 -GVRVFSAPGRAAVPGVGAFLFSGPGAGASY------CCGDYGAPDSQAEGLESAGSRQR 168
G P A P G LF Y G PD Q GL A S R
Sbjct: 191 GGAHTRKLPRARASPPTGRRLFRPSWMQIKYFPPQKTYLGVGPQPDFQIAGLIFAASSPR 250
Query: 169 ILPATAPIPSSLSLRLPF----PGFFPLC 193
P SL LR F PG PLC
Sbjct: 251 RAQGARPATCSLWLRPSFRLGPPGLRPLC 279
>gi|169165128 PREDICTED: hypothetical protein LOC401106 [Homo
sapiens]
Length = 297
Score = 31.2 bits (69), Expect = 0.64
Identities = 42/149 (28%), Positives = 44/149 (29%), Gaps = 41/149 (27%)
Query: 86 SRALPALPLRQPHPPVLRAALGSLK------PCPLP------------------------ 115
+RA LP R P PP+ A L K P P P
Sbjct: 131 ARAGSGLPRRMPRPPIAFATLERAKERKRQPPSPPPKQTDKKLSFSYDHGLCAPAAGGGQ 190
Query: 116 -GVRVFSAPGRAAVPGVGAFLFSGPGAGASY------CCGDYGAPDSQAEGLESAGSRQR 168
G P A P G LF Y G PD Q GL A S R
Sbjct: 191 GGAHTRKLPRARASPPTGRRLFRPSWMQIKYFPPQKTYLGVGPQPDFQIAGLIFAASSPR 250
Query: 169 ILPATAPIPSSLSLRLPF----PGFFPLC 193
P SL LR F PG PLC
Sbjct: 251 RAQGARPATCSLWLRPSFRLGPPGLRPLC 279
>gi|217416343 fibrosin-like 1 [Homo sapiens]
Length = 1045
Score = 31.2 bits (69), Expect = 0.64
Identities = 28/101 (27%), Positives = 39/101 (38%), Gaps = 15/101 (14%)
Query: 88 ALPALPLRQPHPPVLRAALGSLKPCPLPGVRVFSAPGRAAVPGVGAFLFSGPGAGASYCC 147
A+P LP PHP + G+ +P S P RA V + + GP G +
Sbjct: 504 AIPGLPTLLPHPGPFGSLQGAFQP-------KVSDPYRAVVK--VSTCWEGPWQGRTL-- 552
Query: 148 GDYGAPDSQAEGLESAGSRQRILPATAPIPSSLSLRLPFPG 188
P + G + S Q+ AP P S S+ PG
Sbjct: 553 ----VPPGRPRGARDSRSLQKTWVGVAPAPLSASILSQKPG 589
>gi|88853066 sperm associated antigen 8 isoform 1 [Homo sapiens]
Length = 485
Score = 31.2 bits (69), Expect = 0.64
Identities = 29/87 (33%), Positives = 36/87 (41%), Gaps = 6/87 (6%)
Query: 108 SLKPCPLPGVRVFSAPGRAAVPGVGAFLFSGPGAGASYCCGDYGAPDSQAEGLESAGSRQ 167
S P P+PG G ++ G G+ SGPG G+ G P S GS
Sbjct: 132 SSNPGPVPGSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHGSGS 191
Query: 168 RILPATAPIP-----SSLSLRLPFPGF 189
PA+ P P S LS +P PGF
Sbjct: 192 HPGPASGPGPDTGPDSELSPCIP-PGF 217
>gi|27734799 REST corepressor 2 [Homo sapiens]
Length = 523
Score = 31.2 bits (69), Expect = 0.64
Identities = 28/93 (30%), Positives = 35/93 (37%), Gaps = 14/93 (15%)
Query: 43 PPPALSGLFLHLLSSPLLRLLSLFGQTSPSEVPGFLGCSCEWHSRALPALPLRQPHPPVL 102
PPP LL PL +L Q P + FL P L QP PP++
Sbjct: 441 PPPTSLSQPPPLLRPPLPTAPTLLRQPPPLQQGRFLQ----------PRLAPNQPPPPLI 490
Query: 103 RAALG----SLKPCPLPGVRVFSAPGRAAVPGV 131
R AL S +P P P + AP P +
Sbjct: 491 RPALAAPRHSARPGPQPPPTLIGAPLEPPAPSL 523
>gi|27502373 sperm associated antigen 8 isoform 2 [Homo sapiens]
Length = 501
Score = 31.2 bits (69), Expect = 0.64
Identities = 29/87 (33%), Positives = 36/87 (41%), Gaps = 6/87 (6%)
Query: 108 SLKPCPLPGVRVFSAPGRAAVPGVGAFLFSGPGAGASYCCGDYGAPDSQAEGLESAGSRQ 167
S P P+PG G ++ G G+ SGPG G+ G P S GS
Sbjct: 132 SSNPGPVPGSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHGSGS 191
Query: 168 RILPATAPIP-----SSLSLRLPFPGF 189
PA+ P P S LS +P PGF
Sbjct: 192 HPGPASGPGPDTGPDSELSPCIP-PGF 217
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 30.8 bits (68), Expect = 0.83
Identities = 24/90 (26%), Positives = 34/90 (37%), Gaps = 17/90 (18%)
Query: 98 HPPVLRAALGSLKPCPLPGVRVFSAPGRAAVPGVGAFLFSGPGAGASYCCGDYGAPDSQA 157
HP + +LGSL+P P PG A +P P + SY P +
Sbjct: 528 HPYAMSPSLGSLRPYP---------PGPAHLP--------PPHSQVSYSQAGPNGPPVSS 570
Query: 158 EGLESAGSRQRILPATAPIPSSLSLRLPFP 187
S+ + Q P + P PS P+P
Sbjct: 571 SSNSSSSTSQGSYPCSHPSPSQGPQGAPYP 600
Score = 28.9 bits (63), Expect = 3.2
Identities = 27/118 (22%), Positives = 47/118 (39%), Gaps = 11/118 (9%)
Query: 92 LPLRQPHPPVLRAALGSLKPCPLPGVRVFSAPGRAAVPGVGA--------FLFSGPGAGA 143
LP P P + +G L P P G + AP ++P + F +S + +
Sbjct: 325 LPGHLPSPHAMGQGMGGLPPGPEKGPTL--APSPHSLPPASSSAPAPPMRFPYSSSSSSS 382
Query: 144 SYCCGDYGAPDSQAEGLESAGSRQRILPATAPIPSSLSLRLPFPGFFPLCQPSQLLWT 201
+ + S A ++ + P + P P+SLS+ P + PSQ +W+
Sbjct: 383 AAASSSSSSSSSSASPFPASQALPSY-PHSFPPPTSLSVSNQPPKYTQPSLPSQAVWS 439
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.140 0.453
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,374,936
Number of Sequences: 37866
Number of extensions: 610054
Number of successful extensions: 2495
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 125
Number of HSP's that attempted gapping in prelim test: 2194
Number of HSP's gapped (non-prelim): 398
length of query: 204
length of database: 18,247,518
effective HSP length: 97
effective length of query: 107
effective length of database: 14,574,516
effective search space: 1559473212
effective search space used: 1559473212
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.