Guide to the Human Genome
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Search of human proteins with 239735575

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239735575 otoancorin isoform 3 [Homo sapiens]
         (1060 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239735575 otoancorin isoform 3 [Homo sapiens]                     2091   0.0  
gi|77404409 otoancorin isoform 1 [Homo sapiens]                      2072   0.0  
gi|24638452 otoancorin isoform 2 [Homo sapiens]                      1606   0.0  
gi|24308527 stereocilin [Homo sapiens]                                110   7e-24
gi|68448528 mesothelin-like [Homo sapiens]                             45   5e-04
gi|218505703 von Willebrand factor A domain containing 3A [Homo ...    39   0.034
gi|148539860 protein tyrosine phosphatase, receptor type, T isof...    35   0.37 
gi|148539858 protein tyrosine phosphatase, receptor type, T isof...    35   0.37 
gi|47458036 hereditary sensory neuropathy, type II [Homo sapiens]      33   1.9  
gi|47132589 protein kinase N1 isoform 2 [Homo sapiens]                 32   2.4  
gi|208431815 protein tyrosine phosphatase, receptor type, K isof...    32   4.1  
gi|18860902 protein tyrosine phosphatase, receptor type, K isofo...    32   4.1  
gi|194097442 protein tyrosine phosphatase, receptor type, N poly...    32   4.1  
gi|194097440 protein tyrosine phosphatase, receptor type, N poly...    32   4.1  
gi|194097438 protein tyrosine phosphatase, receptor type, N poly...    32   4.1  
gi|50897852 coiled-coil domain containing 88A isoform 2 [Homo sa...    31   5.4  
gi|208022632 coiled-coil domain containing 88A isoform 1 [Homo s...    31   5.4  
gi|157419150 protein tyrosine phosphatase, receptor type, M isof...    31   5.4  
gi|157419152 protein tyrosine phosphatase, receptor type, M isof...    31   5.4  
gi|217416360 G protein-coupled receptor 175 isoform 2 [Homo sapi...    31   7.1  
gi|47132591 protein kinase N1 isoform 1 [Homo sapiens]                 31   7.1  
gi|167736355 mucin 4 isoform a [Homo sapiens]                          30   9.2  

>gi|239735575 otoancorin isoform 3 [Homo sapiens]
          Length = 1060

 Score = 2091 bits (5417), Expect = 0.0
 Identities = 1060/1060 (100%), Positives = 1060/1060 (100%)

Query: 1    MGNSITYRDQAAVENHLEQRLHQPQKLLEDLRKTDAQQFRTAMKCLLEDKKDGLDLKDII 60
            MGNSITYRDQAAVENHLEQRLHQPQKLLEDLRKTDAQQFRTAMKCLLEDKKDGLDLKDII
Sbjct: 1    MGNSITYRDQAAVENHLEQRLHQPQKLLEDLRKTDAQQFRTAMKCLLEDKKDGLDLKDII 60

Query: 61   IDLGEIRERALQSPGVNRSLFLITLERCFQMLNSLECVEILGKVLRGSSGSFLQPDITER 120
            IDLGEIRERALQSPGVNRSLFLITLERCFQMLNSLECVEILGKVLRGSSGSFLQPDITER
Sbjct: 61   IDLGEIRERALQSPGVNRSLFLITLERCFQMLNSLECVEILGKVLRGSSGSFLQPDITER 120

Query: 121  LPRDLREDAFKNLSAVFKDLYDKTSAHSQRALYSWMTGILQTSSNATDDSASWVSAEHLW 180
            LPRDLREDAFKNLSAVFKDLYDKTSAHSQRALYSWMTGILQTSSNATDDSASWVSAEHLW
Sbjct: 121  LPRDLREDAFKNLSAVFKDLYDKTSAHSQRALYSWMTGILQTSSNATDDSASWVSAEHLW 180

Query: 181  VLGRYMVHLSFEEITKISPIEIGLFISYDNATKQLDMVYDITPELAQAFLERISSSNFNM 240
            VLGRYMVHLSFEEITKISPIEIGLFISYDNATKQLDMVYDITPELAQAFLERISSSNFNM
Sbjct: 181  VLGRYMVHLSFEEITKISPIEIGLFISYDNATKQLDMVYDITPELAQAFLERISSSNFNM 240

Query: 241  RNTSTIHRLGLLVCFYNDLELLDATVAQVLLYQMIKCSHLRGFQAGVQKLKAELLDIAME 300
            RNTSTIHRLGLLVCFYNDLELLDATVAQVLLYQMIKCSHLRGFQAGVQKLKAELLDIAME
Sbjct: 241  RNTSTIHRLGLLVCFYNDLELLDATVAQVLLYQMIKCSHLRGFQAGVQKLKAELLDIAME 300

Query: 301  NQTLNETLGSLSDAVVGLTYSQLESLSPEAVHGAISTLNQVSGWAKSQVIILSAKYLAHE 360
            NQTLNETLGSLSDAVVGLTYSQLESLSPEAVHGAISTLNQVSGWAKSQVIILSAKYLAHE
Sbjct: 301  NQTLNETLGSLSDAVVGLTYSQLESLSPEAVHGAISTLNQVSGWAKSQVIILSAKYLAHE 360

Query: 361  KVLSFYNVSQMGALLAGVSTQAFCSMKRKDISQVLRSAVSQYVSDLSPAQQQGILSKMVQ 420
            KVLSFYNVSQMGALLAGVSTQAFCSMKRKDISQVLRSAVSQYVSDLSPAQQQGILSKMVQ
Sbjct: 361  KVLSFYNVSQMGALLAGVSTQAFCSMKRKDISQVLRSAVSQYVSDLSPAQQQGILSKMVQ 420

Query: 421  AEDTAPGIVEIQGAFFKEVSLFDLRRQPGFNSTVLKDKELGRSQALFLYELLLKTTRRPE 480
            AEDTAPGIVEIQGAFFKEVSLFDLRRQPGFNSTVLKDKELGRSQALFLYELLLKTTRRPE
Sbjct: 421  AEDTAPGIVEIQGAFFKEVSLFDLRRQPGFNSTVLKDKELGRSQALFLYELLLKTTRRPE 480

Query: 481  ELLSAGQLVKGVTCSHIDAMSTDFFLAHFQDFQNNFALLSPYQVNCLAWKYWEVSRLSMP 540
            ELLSAGQLVKGVTCSHIDAMSTDFFLAHFQDFQNNFALLSPYQVNCLAWKYWEVSRLSMP
Sbjct: 481  ELLSAGQLVKGVTCSHIDAMSTDFFLAHFQDFQNNFALLSPYQVNCLAWKYWEVSRLSMP 540

Query: 541  PFLLAALPARYLASVPASQCVPFLISLGKSWLDSLVLDSHKKTSVLRKVQQCLDDSIADE 600
            PFLLAALPARYLASVPASQCVPFLISLGKSWLDSLVLDSHKKTSVLRKVQQCLDDSIADE
Sbjct: 541  PFLLAALPARYLASVPASQCVPFLISLGKSWLDSLVLDSHKKTSVLRKVQQCLDDSIADE 600

Query: 601  YTVDIMGNLLCHLPAAIIDRGISPRAWATALHGLRDCPDLNPEQKAAVRLKLLGQYGLPQ 660
            YTVDIMGNLLCHLPAAIIDRGISPRAWATALHGLRDCPDLNPEQKAAVRLKLLGQYGLPQ
Sbjct: 601  YTVDIMGNLLCHLPAAIIDRGISPRAWATALHGLRDCPDLNPEQKAAVRLKLLGQYGLPQ 660

Query: 661  HWTAETTKDLGPFLVLFSGDELSSIATKFPEILLQAASKMARTLPTKEFLWAVFQSVRNS 720
            HWTAETTKDLGPFLVLFSGDELSSIATKFPEILLQAASKMARTLPTKEFLWAVFQSVRNS
Sbjct: 661  HWTAETTKDLGPFLVLFSGDELSSIATKFPEILLQAASKMARTLPTKEFLWAVFQSVRNS 720

Query: 721  SDKIPSYDPMPGCHGVVAPSSDDIFKLAEANACWALEDLRCMEEDTFIRTVELLGAVQGF 780
            SDKIPSYDPMPGCHGVVAPSSDDIFKLAEANACWALEDLRCMEEDTFIRTVELLGAVQGF
Sbjct: 721  SDKIPSYDPMPGCHGVVAPSSDDIFKLAEANACWALEDLRCMEEDTFIRTVELLGAVQGF 780

Query: 781  SRPQLMTLKEKAIQVWDMPSYWREHHIVSLGRIALALNESELEQLDLSSIDTVASLSWQT 840
            SRPQLMTLKEKAIQVWDMPSYWREHHIVSLGRIALALNESELEQLDLSSIDTVASLSWQT
Sbjct: 781  SRPQLMTLKEKAIQVWDMPSYWREHHIVSLGRIALALNESELEQLDLSSIDTVASLSWQT 840

Query: 841  EWTPGQAESILQGYLDDSGYSIQDLKSFHLVGLGATLCAINITEIPLIKISEFRVVVARI 900
            EWTPGQAESILQGYLDDSGYSIQDLKSFHLVGLGATLCAINITEIPLIKISEFRVVVARI
Sbjct: 841  EWTPGQAESILQGYLDDSGYSIQDLKSFHLVGLGATLCAINITEIPLIKISEFRVVVARI 900

Query: 901  GTLLCSTHVLAEFKRKAEVVFGDPTEWTSSVLQELGTIAAGLTKAELRMLDKDLMPYFQP 960
            GTLLCSTHVLAEFKRKAEVVFGDPTEWTSSVLQELGTIAAGLTKAELRMLDKDLMPYFQP
Sbjct: 901  GTLLCSTHVLAEFKRKAEVVFGDPTEWTSSVLQELGTIAAGLTKAELRMLDKDLMPYFQP 960

Query: 961  SAIKCLPDEIFKELSAEQIASLGPENAAAVTHAQRRRLSPLQLQSLQQALDGAKTHSWQD 1020
            SAIKCLPDEIFKELSAEQIASLGPENAAAVTHAQRRRLSPLQLQSLQQALDGAKTHSWQD
Sbjct: 961  SAIKCLPDEIFKELSAEQIASLGPENAAAVTHAQRRRLSPLQLQSLQQALDGAKTHSWQD 1020

Query: 1021 APASAGPTRTSSSRSPAGALQSWGLWLGCPLLVLMAKLLW 1060
            APASAGPTRTSSSRSPAGALQSWGLWLGCPLLVLMAKLLW
Sbjct: 1021 APASAGPTRTSSSRSPAGALQSWGLWLGCPLLVLMAKLLW 1060


>gi|77404409 otoancorin isoform 1 [Homo sapiens]
          Length = 1139

 Score = 2072 bits (5369), Expect = 0.0
 Identities = 1051/1051 (100%), Positives = 1051/1051 (100%)

Query: 10   QAAVENHLEQRLHQPQKLLEDLRKTDAQQFRTAMKCLLEDKKDGLDLKDIIIDLGEIRER 69
            QAAVENHLEQRLHQPQKLLEDLRKTDAQQFRTAMKCLLEDKKDGLDLKDIIIDLGEIRER
Sbjct: 89   QAAVENHLEQRLHQPQKLLEDLRKTDAQQFRTAMKCLLEDKKDGLDLKDIIIDLGEIRER 148

Query: 70   ALQSPGVNRSLFLITLERCFQMLNSLECVEILGKVLRGSSGSFLQPDITERLPRDLREDA 129
            ALQSPGVNRSLFLITLERCFQMLNSLECVEILGKVLRGSSGSFLQPDITERLPRDLREDA
Sbjct: 149  ALQSPGVNRSLFLITLERCFQMLNSLECVEILGKVLRGSSGSFLQPDITERLPRDLREDA 208

Query: 130  FKNLSAVFKDLYDKTSAHSQRALYSWMTGILQTSSNATDDSASWVSAEHLWVLGRYMVHL 189
            FKNLSAVFKDLYDKTSAHSQRALYSWMTGILQTSSNATDDSASWVSAEHLWVLGRYMVHL
Sbjct: 209  FKNLSAVFKDLYDKTSAHSQRALYSWMTGILQTSSNATDDSASWVSAEHLWVLGRYMVHL 268

Query: 190  SFEEITKISPIEIGLFISYDNATKQLDMVYDITPELAQAFLERISSSNFNMRNTSTIHRL 249
            SFEEITKISPIEIGLFISYDNATKQLDMVYDITPELAQAFLERISSSNFNMRNTSTIHRL
Sbjct: 269  SFEEITKISPIEIGLFISYDNATKQLDMVYDITPELAQAFLERISSSNFNMRNTSTIHRL 328

Query: 250  GLLVCFYNDLELLDATVAQVLLYQMIKCSHLRGFQAGVQKLKAELLDIAMENQTLNETLG 309
            GLLVCFYNDLELLDATVAQVLLYQMIKCSHLRGFQAGVQKLKAELLDIAMENQTLNETLG
Sbjct: 329  GLLVCFYNDLELLDATVAQVLLYQMIKCSHLRGFQAGVQKLKAELLDIAMENQTLNETLG 388

Query: 310  SLSDAVVGLTYSQLESLSPEAVHGAISTLNQVSGWAKSQVIILSAKYLAHEKVLSFYNVS 369
            SLSDAVVGLTYSQLESLSPEAVHGAISTLNQVSGWAKSQVIILSAKYLAHEKVLSFYNVS
Sbjct: 389  SLSDAVVGLTYSQLESLSPEAVHGAISTLNQVSGWAKSQVIILSAKYLAHEKVLSFYNVS 448

Query: 370  QMGALLAGVSTQAFCSMKRKDISQVLRSAVSQYVSDLSPAQQQGILSKMVQAEDTAPGIV 429
            QMGALLAGVSTQAFCSMKRKDISQVLRSAVSQYVSDLSPAQQQGILSKMVQAEDTAPGIV
Sbjct: 449  QMGALLAGVSTQAFCSMKRKDISQVLRSAVSQYVSDLSPAQQQGILSKMVQAEDTAPGIV 508

Query: 430  EIQGAFFKEVSLFDLRRQPGFNSTVLKDKELGRSQALFLYELLLKTTRRPEELLSAGQLV 489
            EIQGAFFKEVSLFDLRRQPGFNSTVLKDKELGRSQALFLYELLLKTTRRPEELLSAGQLV
Sbjct: 509  EIQGAFFKEVSLFDLRRQPGFNSTVLKDKELGRSQALFLYELLLKTTRRPEELLSAGQLV 568

Query: 490  KGVTCSHIDAMSTDFFLAHFQDFQNNFALLSPYQVNCLAWKYWEVSRLSMPPFLLAALPA 549
            KGVTCSHIDAMSTDFFLAHFQDFQNNFALLSPYQVNCLAWKYWEVSRLSMPPFLLAALPA
Sbjct: 569  KGVTCSHIDAMSTDFFLAHFQDFQNNFALLSPYQVNCLAWKYWEVSRLSMPPFLLAALPA 628

Query: 550  RYLASVPASQCVPFLISLGKSWLDSLVLDSHKKTSVLRKVQQCLDDSIADEYTVDIMGNL 609
            RYLASVPASQCVPFLISLGKSWLDSLVLDSHKKTSVLRKVQQCLDDSIADEYTVDIMGNL
Sbjct: 629  RYLASVPASQCVPFLISLGKSWLDSLVLDSHKKTSVLRKVQQCLDDSIADEYTVDIMGNL 688

Query: 610  LCHLPAAIIDRGISPRAWATALHGLRDCPDLNPEQKAAVRLKLLGQYGLPQHWTAETTKD 669
            LCHLPAAIIDRGISPRAWATALHGLRDCPDLNPEQKAAVRLKLLGQYGLPQHWTAETTKD
Sbjct: 689  LCHLPAAIIDRGISPRAWATALHGLRDCPDLNPEQKAAVRLKLLGQYGLPQHWTAETTKD 748

Query: 670  LGPFLVLFSGDELSSIATKFPEILLQAASKMARTLPTKEFLWAVFQSVRNSSDKIPSYDP 729
            LGPFLVLFSGDELSSIATKFPEILLQAASKMARTLPTKEFLWAVFQSVRNSSDKIPSYDP
Sbjct: 749  LGPFLVLFSGDELSSIATKFPEILLQAASKMARTLPTKEFLWAVFQSVRNSSDKIPSYDP 808

Query: 730  MPGCHGVVAPSSDDIFKLAEANACWALEDLRCMEEDTFIRTVELLGAVQGFSRPQLMTLK 789
            MPGCHGVVAPSSDDIFKLAEANACWALEDLRCMEEDTFIRTVELLGAVQGFSRPQLMTLK
Sbjct: 809  MPGCHGVVAPSSDDIFKLAEANACWALEDLRCMEEDTFIRTVELLGAVQGFSRPQLMTLK 868

Query: 790  EKAIQVWDMPSYWREHHIVSLGRIALALNESELEQLDLSSIDTVASLSWQTEWTPGQAES 849
            EKAIQVWDMPSYWREHHIVSLGRIALALNESELEQLDLSSIDTVASLSWQTEWTPGQAES
Sbjct: 869  EKAIQVWDMPSYWREHHIVSLGRIALALNESELEQLDLSSIDTVASLSWQTEWTPGQAES 928

Query: 850  ILQGYLDDSGYSIQDLKSFHLVGLGATLCAINITEIPLIKISEFRVVVARIGTLLCSTHV 909
            ILQGYLDDSGYSIQDLKSFHLVGLGATLCAINITEIPLIKISEFRVVVARIGTLLCSTHV
Sbjct: 929  ILQGYLDDSGYSIQDLKSFHLVGLGATLCAINITEIPLIKISEFRVVVARIGTLLCSTHV 988

Query: 910  LAEFKRKAEVVFGDPTEWTSSVLQELGTIAAGLTKAELRMLDKDLMPYFQPSAIKCLPDE 969
            LAEFKRKAEVVFGDPTEWTSSVLQELGTIAAGLTKAELRMLDKDLMPYFQPSAIKCLPDE
Sbjct: 989  LAEFKRKAEVVFGDPTEWTSSVLQELGTIAAGLTKAELRMLDKDLMPYFQPSAIKCLPDE 1048

Query: 970  IFKELSAEQIASLGPENAAAVTHAQRRRLSPLQLQSLQQALDGAKTHSWQDAPASAGPTR 1029
            IFKELSAEQIASLGPENAAAVTHAQRRRLSPLQLQSLQQALDGAKTHSWQDAPASAGPTR
Sbjct: 1049 IFKELSAEQIASLGPENAAAVTHAQRRRLSPLQLQSLQQALDGAKTHSWQDAPASAGPTR 1108

Query: 1030 TSSSRSPAGALQSWGLWLGCPLLVLMAKLLW 1060
            TSSSRSPAGALQSWGLWLGCPLLVLMAKLLW
Sbjct: 1109 TSSSRSPAGALQSWGLWLGCPLLVLMAKLLW 1139


>gi|24638452 otoancorin isoform 2 [Homo sapiens]
          Length = 815

 Score = 1606 bits (4158), Expect = 0.0
 Identities = 813/813 (100%), Positives = 813/813 (100%)

Query: 248  RLGLLVCFYNDLELLDATVAQVLLYQMIKCSHLRGFQAGVQKLKAELLDIAMENQTLNET 307
            RLGLLVCFYNDLELLDATVAQVLLYQMIKCSHLRGFQAGVQKLKAELLDIAMENQTLNET
Sbjct: 3    RLGLLVCFYNDLELLDATVAQVLLYQMIKCSHLRGFQAGVQKLKAELLDIAMENQTLNET 62

Query: 308  LGSLSDAVVGLTYSQLESLSPEAVHGAISTLNQVSGWAKSQVIILSAKYLAHEKVLSFYN 367
            LGSLSDAVVGLTYSQLESLSPEAVHGAISTLNQVSGWAKSQVIILSAKYLAHEKVLSFYN
Sbjct: 63   LGSLSDAVVGLTYSQLESLSPEAVHGAISTLNQVSGWAKSQVIILSAKYLAHEKVLSFYN 122

Query: 368  VSQMGALLAGVSTQAFCSMKRKDISQVLRSAVSQYVSDLSPAQQQGILSKMVQAEDTAPG 427
            VSQMGALLAGVSTQAFCSMKRKDISQVLRSAVSQYVSDLSPAQQQGILSKMVQAEDTAPG
Sbjct: 123  VSQMGALLAGVSTQAFCSMKRKDISQVLRSAVSQYVSDLSPAQQQGILSKMVQAEDTAPG 182

Query: 428  IVEIQGAFFKEVSLFDLRRQPGFNSTVLKDKELGRSQALFLYELLLKTTRRPEELLSAGQ 487
            IVEIQGAFFKEVSLFDLRRQPGFNSTVLKDKELGRSQALFLYELLLKTTRRPEELLSAGQ
Sbjct: 183  IVEIQGAFFKEVSLFDLRRQPGFNSTVLKDKELGRSQALFLYELLLKTTRRPEELLSAGQ 242

Query: 488  LVKGVTCSHIDAMSTDFFLAHFQDFQNNFALLSPYQVNCLAWKYWEVSRLSMPPFLLAAL 547
            LVKGVTCSHIDAMSTDFFLAHFQDFQNNFALLSPYQVNCLAWKYWEVSRLSMPPFLLAAL
Sbjct: 243  LVKGVTCSHIDAMSTDFFLAHFQDFQNNFALLSPYQVNCLAWKYWEVSRLSMPPFLLAAL 302

Query: 548  PARYLASVPASQCVPFLISLGKSWLDSLVLDSHKKTSVLRKVQQCLDDSIADEYTVDIMG 607
            PARYLASVPASQCVPFLISLGKSWLDSLVLDSHKKTSVLRKVQQCLDDSIADEYTVDIMG
Sbjct: 303  PARYLASVPASQCVPFLISLGKSWLDSLVLDSHKKTSVLRKVQQCLDDSIADEYTVDIMG 362

Query: 608  NLLCHLPAAIIDRGISPRAWATALHGLRDCPDLNPEQKAAVRLKLLGQYGLPQHWTAETT 667
            NLLCHLPAAIIDRGISPRAWATALHGLRDCPDLNPEQKAAVRLKLLGQYGLPQHWTAETT
Sbjct: 363  NLLCHLPAAIIDRGISPRAWATALHGLRDCPDLNPEQKAAVRLKLLGQYGLPQHWTAETT 422

Query: 668  KDLGPFLVLFSGDELSSIATKFPEILLQAASKMARTLPTKEFLWAVFQSVRNSSDKIPSY 727
            KDLGPFLVLFSGDELSSIATKFPEILLQAASKMARTLPTKEFLWAVFQSVRNSSDKIPSY
Sbjct: 423  KDLGPFLVLFSGDELSSIATKFPEILLQAASKMARTLPTKEFLWAVFQSVRNSSDKIPSY 482

Query: 728  DPMPGCHGVVAPSSDDIFKLAEANACWALEDLRCMEEDTFIRTVELLGAVQGFSRPQLMT 787
            DPMPGCHGVVAPSSDDIFKLAEANACWALEDLRCMEEDTFIRTVELLGAVQGFSRPQLMT
Sbjct: 483  DPMPGCHGVVAPSSDDIFKLAEANACWALEDLRCMEEDTFIRTVELLGAVQGFSRPQLMT 542

Query: 788  LKEKAIQVWDMPSYWREHHIVSLGRIALALNESELEQLDLSSIDTVASLSWQTEWTPGQA 847
            LKEKAIQVWDMPSYWREHHIVSLGRIALALNESELEQLDLSSIDTVASLSWQTEWTPGQA
Sbjct: 543  LKEKAIQVWDMPSYWREHHIVSLGRIALALNESELEQLDLSSIDTVASLSWQTEWTPGQA 602

Query: 848  ESILQGYLDDSGYSIQDLKSFHLVGLGATLCAINITEIPLIKISEFRVVVARIGTLLCST 907
            ESILQGYLDDSGYSIQDLKSFHLVGLGATLCAINITEIPLIKISEFRVVVARIGTLLCST
Sbjct: 603  ESILQGYLDDSGYSIQDLKSFHLVGLGATLCAINITEIPLIKISEFRVVVARIGTLLCST 662

Query: 908  HVLAEFKRKAEVVFGDPTEWTSSVLQELGTIAAGLTKAELRMLDKDLMPYFQPSAIKCLP 967
            HVLAEFKRKAEVVFGDPTEWTSSVLQELGTIAAGLTKAELRMLDKDLMPYFQPSAIKCLP
Sbjct: 663  HVLAEFKRKAEVVFGDPTEWTSSVLQELGTIAAGLTKAELRMLDKDLMPYFQPSAIKCLP 722

Query: 968  DEIFKELSAEQIASLGPENAAAVTHAQRRRLSPLQLQSLQQALDGAKTHSWQDAPASAGP 1027
            DEIFKELSAEQIASLGPENAAAVTHAQRRRLSPLQLQSLQQALDGAKTHSWQDAPASAGP
Sbjct: 723  DEIFKELSAEQIASLGPENAAAVTHAQRRRLSPLQLQSLQQALDGAKTHSWQDAPASAGP 782

Query: 1028 TRTSSSRSPAGALQSWGLWLGCPLLVLMAKLLW 1060
            TRTSSSRSPAGALQSWGLWLGCPLLVLMAKLLW
Sbjct: 783  TRTSSSRSPAGALQSWGLWLGCPLLVLMAKLLW 815


>gi|24308527 stereocilin [Homo sapiens]
          Length = 1775

 Score =  110 bits (275), Expect = 7e-24
 Identities = 94/332 (28%), Positives = 140/332 (42%), Gaps = 29/332 (8%)

Query: 717  VRNSSDKIPSYDPMPGCHGVVAPSSDDIFKLAEANACWALEDLRCMEEDTFIRTVELLGA 776
            VR +++ +P  +P+P C  V               A W+   +  ME   F   + L   
Sbjct: 1450 VRPAAEDLP--EPVPNCADVRGTFP----------AAWSATQIAEMELSDFEDCLTLFAG 1497

Query: 777  VQGFSRPQLMTLKEKAIQVWDMPSYWREHHIVSLGRIALALNESELEQLDLSSIDTVASL 836
              G    +L     KA Q+W  P  +R   I+ LGR+ + L + EL++L L     +++L
Sbjct: 1498 DPGLGPEELRAAMGKAKQLWGPPRGFRPEQILQLGRLLIGLGDRELQELILVDWGVLSTL 1557

Query: 837  SWQTEWTPGQAESILQGYLDDSGYSIQDLKSFHLVGLGATLCAINITEIPLIKISEFRVV 896
                 W+  Q   ++  +L  SG  +  L   HL  LG TLC +   E+  I   EF   
Sbjct: 1558 GQIDGWSTTQLRIVVSSFLRQSGRHVSHLDFVHLTALGYTLCGLRPEELQHISSWEFSQA 1617

Query: 897  VARIGT--LLCSTHVLAEFKRKAEVV--FGDPTEWTSSVLQELGTIAAGLTKAELRMLDK 952
               +GT  L CS   L        +   FG  + W   +  E+GTIAAG+    L  L +
Sbjct: 1618 ALFLGTLHLQCSEEQLEVLAHLLVLPGGFGPISNWGPEIFTEIGTIAAGIPDLALSALLR 1677

Query: 953  DLMPYFQPSAIKCLPDEIFKEL-SAEQIASLGPENAAAVTHAQRRRLSPLQLQSLQQALD 1011
              +    P AI  +P   F  + S  Q++SL    A AVT  Q   LSP Q +++  A  
Sbjct: 1678 GQIQGVTPLAISVIPPPKFAVVFSPIQLSSLTSAQAVAVTPEQMAFLSPEQRRAVAWA-- 1735

Query: 1012 GAKTHSWQDAPASAGPTRTSSSRSPAGALQSW 1043
                H  +++P   G       RS A  LQ W
Sbjct: 1736 ---QHEGKESPEQQG-------RSTAWGLQDW 1757



 Score = 35.0 bits (79), Expect = 0.37
 Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 5/92 (5%)

Query: 306  ETLGSLSDAVVGLTYSQLESLSPEAVHGAISTLNQVSGWAKSQVIILSAKYL----AHEK 361
            E +  L   ++GL   +L+ L      G +STL Q+ GW+ +Q+ I+ + +L     H  
Sbjct: 1526 EQILQLGRLLIGLGDRELQELIL-VDWGVLSTLGQIDGWSTTQLRIVVSSFLRQSGRHVS 1584

Query: 362  VLSFYNVSQMGALLAGVSTQAFCSMKRKDISQ 393
             L F +++ +G  L G+  +    +   + SQ
Sbjct: 1585 HLDFVHLTALGYTLCGLRPEELQHISSWEFSQ 1616


>gi|68448528 mesothelin-like [Homo sapiens]
          Length = 1053

 Score = 44.7 bits (104), Expect = 5e-04
 Identities = 71/305 (23%), Positives = 117/305 (38%), Gaps = 32/305 (10%)

Query: 605 IMGNLLCHLPAAIIDRGISPRAWATALHGLRDCPDLNPEQKAAVRLKLLG---QYGLPQH 661
           ++G L+C + A+ I       A    L  LR CP L   Q+ A+   L G     G P  
Sbjct: 529 LLGALVCDMDASSIGA-----ADPHMLENLRRCPRLTAAQRIALNSLLAGGKTSLGPPGS 583

Query: 662 WTAETTKDLGPFLVLFSGDELSSI--ATKFPEILLQAASKMARTLPTKEFLWAVFQSVRN 719
           WT E  + LGP     S    + +  A          AS     L  +E    V   + +
Sbjct: 584 WTLEGLQALGPLATYISPHLWAQVQEAVGLGFFRSVVASCQVGRLGQREARCFVTSFLES 643

Query: 720 SSDKIPSYDPMPGCHGVVAPSSDDIFKL----AEANACWALEDLRCMEEDTFIRTVELLG 775
            +  + S   +   +   A   DD+F +    AE  +C           D  I    L  
Sbjct: 644 KTKPVSSRPRLSTGNITAATLRDDLFLVHYDCAELESCL----------DGCILRTNLDT 693

Query: 776 AVQGFSRPQLM-TLKEKAIQVWDMPSYWREHHIVSLGRIALALNESELEQLDLSSIDTVA 834
            +Q     +    +K K  Q++  P    E  +  +  +    + +E+ Q  ++S DTV 
Sbjct: 694 LLQHLLPTECQHVVKAKLAQIY--PQGLPEDQLRLITSLVYLYSRTEIGQWSITSQDTVM 751

Query: 835 SLSWQTEWTPGQAESILQGYLDDSGYSIQDLKSFHLVGLGAT-LCAINITEIPLIKISEF 893
           +L         Q E++LQ +L+ +G     +    L+ +G T LC ++  +I  I   E 
Sbjct: 752 ALLASDVALENQTEAVLQKFLEHNG----TVSGALLLAIGGTRLCWMSPHQIQTIHPQEL 807

Query: 894 RVVVA 898
           R+  A
Sbjct: 808 RLAGA 812


>gi|218505703 von Willebrand factor A domain containing 3A [Homo
            sapiens]
          Length = 1184

 Score = 38.5 bits (88), Expect = 0.034
 Identities = 56/227 (24%), Positives = 93/227 (40%), Gaps = 15/227 (6%)

Query: 754  WALEDLRCMEEDTFIRTVELLGAVQGFSRPQLMTLK-EKAIQVWD-MPSYWREHHIVSLG 811
            W L   R +        V +L    G   P L  +K E  + +W+ +       +++S  
Sbjct: 943  WLLSGSRRLFGTVLESKVCILLDTSGSMGPYLQQVKTELVLLIWEQLRKCCDSFNLLSFA 1002

Query: 812  RIALALNESELEQLDLSSIDTVASLSWQTEWTPGQAESILQGYLDDSGYSIQDLKSFHLV 871
                +  ++ +E  D +  +   ++ W T      + SILQ  L    +S  DL+  +L+
Sbjct: 1003 ESFQSWQDTLVETTDAACHE---AMQWVTHLQAQGSTSILQALL--KAFSFHDLEGLYLL 1057

Query: 872  --GLGATLCAINITEIPLIKISEFRVVVARIGTLLCSTHVLAEFKRKAEVVFGDPTEWTS 929
              G   T C++ + E+   K+ E R V     +L CS     EF RK     G    +  
Sbjct: 1058 TDGKPDTSCSLVLNEVQ--KLREKRDVKVHTISLNCSDRAAVEFLRKLASFTGG--RYHC 1113

Query: 930  SVLQE-LGTIAAGLTKAELRMLDKDLMPYFQPSAIKCLPDEIFKELS 975
             V ++ L  I + LTK  +   D  L P F+   ++ L  EI K  S
Sbjct: 1114 PVGEDTLSKIHSLLTKGFINEKDPTLPP-FEGDDLRILAQEITKARS 1159


>gi|148539860 protein tyrosine phosphatase, receptor type, T isoform 2
            precursor [Homo sapiens]
          Length = 1441

 Score = 35.0 bits (79), Expect = 0.37
 Identities = 16/53 (30%), Positives = 33/53 (62%), Gaps = 3/53 (5%)

Query: 550  RYLASVPASQCVPFLISL---GKSWLDSLVLDSHKKTSVLRKVQQCLDDSIAD 599
            R +  +P  +C+PFLIS+     +++++ ++DSHK+ +     Q  L +++AD
Sbjct: 1207 RSMDVLPLDRCLPFLISVDGESSNYINAALMDSHKQPAAFVVTQHPLPNTVAD 1259


>gi|148539858 protein tyrosine phosphatase, receptor type, T isoform 1
            precursor [Homo sapiens]
          Length = 1460

 Score = 35.0 bits (79), Expect = 0.37
 Identities = 16/53 (30%), Positives = 33/53 (62%), Gaps = 3/53 (5%)

Query: 550  RYLASVPASQCVPFLISL---GKSWLDSLVLDSHKKTSVLRKVQQCLDDSIAD 599
            R +  +P  +C+PFLIS+     +++++ ++DSHK+ +     Q  L +++AD
Sbjct: 1226 RSMDVLPLDRCLPFLISVDGESSNYINAALMDSHKQPAAFVVTQHPLPNTVAD 1278


>gi|47458036 hereditary sensory neuropathy, type II [Homo sapiens]
          Length = 434

 Score = 32.7 bits (73), Expect = 1.9
 Identities = 31/124 (25%), Positives = 47/124 (37%), Gaps = 16/124 (12%)

Query: 922  GDPTEWTSSVLQELGTIAAGLTKAELRMLDKDLMPYFQPSAI-------KCLPDEIFKEL 974
            G PT WT   +  LGT A+ +T     +    + P F+PS +         LP+E    +
Sbjct: 88   GSPTNWTPEAVVMLGTTASRVTGESCEI---QVHPMFEPSQVYSDYRPGLVLPEEAHYFI 144

Query: 975  SAEQIASLGPENAAAVTHAQRRRLSPLQLQSLQQALDGAKTHSWQDAPASAGPTRTSSSR 1034
              E +   G    A V  A++    P     L   +        +  P   GPT +S   
Sbjct: 145  PQEAVYVAGVHYQARV--AEQYEGIPYNSSVLSSPMKQIP----EQKPVQGGPTSSSVFE 198

Query: 1035 SPAG 1038
             P+G
Sbjct: 199  FPSG 202


>gi|47132589 protein kinase N1 isoform 2 [Homo sapiens]
          Length = 942

 Score = 32.3 bits (72), Expect = 2.4
 Identities = 32/132 (24%), Positives = 58/132 (43%), Gaps = 9/132 (6%)

Query: 917  AEVVFGDPTEWTSSVLQELGTIAAGLTKAELRM---LDKDLMPYFQPSAIKCLPD-EIFK 972
            ++ V  +P  W  S+L++LG   A L    ++    L+++ +       +K     E  +
Sbjct: 3    SDAVQSEPRSW--SLLEQLGLAGADLAAPGVQQQLELERERLRREIRKELKLKEGAENLR 60

Query: 973  ELSAEQIASLGPENAAAVTHAQRRRLSPLQLQSLQQAL---DGAKTHSWQDAPASAGPTR 1029
              + +   SLGP        ++R  L   QLQ L   +   D A TH    +P + GPT 
Sbjct: 61   RATTDLGRSLGPVELLLRGSSRRLDLLHQQLQELHAHVVLPDPAATHDGPQSPGAGGPTC 120

Query: 1030 TSSSRSPAGALQ 1041
            ++++ S    L+
Sbjct: 121  SATNLSRVAGLE 132


>gi|208431815 protein tyrosine phosphatase, receptor type, K isoform a
            [Homo sapiens]
          Length = 1446

 Score = 31.6 bits (70), Expect = 4.1
 Identities = 17/72 (23%), Positives = 39/72 (54%), Gaps = 8/72 (11%)

Query: 536  RLSMPPFLLAALPA-----RYLASVPASQCVPFLISL---GKSWLDSLVLDSHKKTSVLR 587
            RL      +A LP      R++  +P  +C+PFLI++     +++++ ++DS+++ +   
Sbjct: 1193 RLQAEDCSIACLPRNHDKNRFMDMLPPDRCLPFLITIDGESSNYINAALMDSYRQPAAFI 1252

Query: 588  KVQQCLDDSIAD 599
              Q  L +++ D
Sbjct: 1253 VTQYPLPNTVKD 1264


>gi|18860902 protein tyrosine phosphatase, receptor type, K isoform b
            [Homo sapiens]
          Length = 1440

 Score = 31.6 bits (70), Expect = 4.1
 Identities = 17/72 (23%), Positives = 39/72 (54%), Gaps = 8/72 (11%)

Query: 536  RLSMPPFLLAALPA-----RYLASVPASQCVPFLISL---GKSWLDSLVLDSHKKTSVLR 587
            RL      +A LP      R++  +P  +C+PFLI++     +++++ ++DS+++ +   
Sbjct: 1187 RLQAEDCSIACLPRNHDKNRFMDMLPPDRCLPFLITIDGESSNYINAALMDSYRQPAAFI 1246

Query: 588  KVQQCLDDSIAD 599
              Q  L +++ D
Sbjct: 1247 VTQYPLPNTVKD 1258


>gi|194097442 protein tyrosine phosphatase, receptor type, N
            polypeptide 2 isoform 3 precursor [Homo sapiens]
          Length = 986

 Score = 31.6 bits (70), Expect = 4.1
 Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 1/50 (2%)

Query: 985  ENAAAVTHAQRRRLSPLQLQSLQQALDG-AKTHSWQDAPASAGPTRTSSS 1033
            E  AA+ +A RR L  L+  S   A D  A+TH+ QD P + G  R S S
Sbjct: 142  EGGAALANALRRHLPFLEALSQAPASDVLARTHTAQDRPPAEGDDRFSES 191


>gi|194097440 protein tyrosine phosphatase, receptor type, N
            polypeptide 2 isoform 1 precursor [Homo sapiens]
          Length = 1015

 Score = 31.6 bits (70), Expect = 4.1
 Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 1/50 (2%)

Query: 985  ENAAAVTHAQRRRLSPLQLQSLQQALDG-AKTHSWQDAPASAGPTRTSSS 1033
            E  AA+ +A RR L  L+  S   A D  A+TH+ QD P + G  R S S
Sbjct: 142  EGGAALANALRRHLPFLEALSQAPASDVLARTHTAQDRPPAEGDDRFSES 191


>gi|194097438 protein tyrosine phosphatase, receptor type, N
            polypeptide 2 isoform 2 precursor [Homo sapiens]
          Length = 998

 Score = 31.6 bits (70), Expect = 4.1
 Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 1/50 (2%)

Query: 985  ENAAAVTHAQRRRLSPLQLQSLQQALDG-AKTHSWQDAPASAGPTRTSSS 1033
            E  AA+ +A RR L  L+  S   A D  A+TH+ QD P + G  R S S
Sbjct: 125  EGGAALANALRRHLPFLEALSQAPASDVLARTHTAQDRPPAEGDDRFSES 174


>gi|50897852 coiled-coil domain containing 88A isoform 2 [Homo
           sapiens]
          Length = 1843

 Score = 31.2 bits (69), Expect = 5.4
 Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 5/43 (11%)

Query: 287 VQKLKAELLDIAMENQTLNETLGSLSDAVVGLTYSQLESLSPE 329
           +Q+L++EL D+ MENQTL + L  L      ++  +LE L  E
Sbjct: 779 IQQLESELQDLEMENQTLQKNLEELK-----ISSKRLEQLEKE 816


>gi|208022632 coiled-coil domain containing 88A isoform 1 [Homo
           sapiens]
          Length = 1870

 Score = 31.2 bits (69), Expect = 5.4
 Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 5/43 (11%)

Query: 287 VQKLKAELLDIAMENQTLNETLGSLSDAVVGLTYSQLESLSPE 329
           +Q+L++EL D+ MENQTL + L  L      ++  +LE L  E
Sbjct: 779 IQQLESELQDLEMENQTLQKNLEELK-----ISSKRLEQLEKE 816


>gi|157419150 protein tyrosine phosphatase, receptor type, M isoform 2
            precursor [Homo sapiens]
          Length = 1452

 Score = 31.2 bits (69), Expect = 5.4
 Identities = 14/53 (26%), Positives = 32/53 (60%), Gaps = 3/53 (5%)

Query: 550  RYLASVPASQCVPFLISL---GKSWLDSLVLDSHKKTSVLRKVQQCLDDSIAD 599
            R +  +P  +C+PFLI++     +++++ ++DS+K+ S     Q  L +++ D
Sbjct: 1218 RCMDILPPDRCLPFLITIDGESSNYINAALMDSYKQPSAFIVTQHPLPNTVKD 1270


>gi|157419152 protein tyrosine phosphatase, receptor type, M isoform 1
            precursor [Homo sapiens]
          Length = 1465

 Score = 31.2 bits (69), Expect = 5.4
 Identities = 14/53 (26%), Positives = 32/53 (60%), Gaps = 3/53 (5%)

Query: 550  RYLASVPASQCVPFLISL---GKSWLDSLVLDSHKKTSVLRKVQQCLDDSIAD 599
            R +  +P  +C+PFLI++     +++++ ++DS+K+ S     Q  L +++ D
Sbjct: 1231 RCMDILPPDRCLPFLITIDGESSNYINAALMDSYKQPSAFIVTQHPLPNTVKD 1283


>gi|217416360 G protein-coupled receptor 175 isoform 2 [Homo
           sapiens]
          Length = 293

 Score = 30.8 bits (68), Expect = 7.1
 Identities = 34/143 (23%), Positives = 65/143 (45%), Gaps = 21/143 (14%)

Query: 163 SSNATDDSASWVSAEHLWVLGRYMVHLSFEEITKISPIEIGLFISYDNATKQLDMVYDIT 222
           S   +  +A+ V+ + LW + R+ + L+ E    +S I +GL   +  +   +  V  IT
Sbjct: 101 SMTVSTSNAATVADKILWEITRFFL-LAIE----LSVIILGLAFGHLESKSSIKRVLAIT 155

Query: 223 PELAQAF------LE------RISSSNFNMRNTSTIHRLGLLVCFYNDLELLDATVAQVL 270
             L+ A+      LE       +S+ +FN+          +  CF+     L      + 
Sbjct: 156 TVLSLAYSVTQGTLEILYPDAHLSAEDFNIYGHGGRQFWLVSSCFF----FLLCRCHNLP 211

Query: 271 LYQMIKCSHLRGFQAGVQKLKAE 293
           + Q+++ +HLRGF  G+ +L A+
Sbjct: 212 VLQLLRSAHLRGFPPGLLRLGAQ 234


>gi|47132591 protein kinase N1 isoform 1 [Homo sapiens]
          Length = 948

 Score = 30.8 bits (68), Expect = 7.1
 Identities = 31/126 (24%), Positives = 55/126 (43%), Gaps = 9/126 (7%)

Query: 923  DPTEWTSSVLQELGTIAAGLTKAELRM---LDKDLMPYFQPSAIKCLPD-EIFKELSAEQ 978
            +P  W  S+L++LG   A L    ++    L+++ +       +K     E  +  + + 
Sbjct: 15   EPRSW--SLLEQLGLAGADLAAPGVQQQLELERERLRREIRKELKLKEGAENLRRATTDL 72

Query: 979  IASLGPENAAAVTHAQRRRLSPLQLQSLQQAL---DGAKTHSWQDAPASAGPTRTSSSRS 1035
              SLGP        ++R  L   QLQ L   +   D A TH    +P + GPT ++++ S
Sbjct: 73   GRSLGPVELLLRGSSRRLDLLHQQLQELHAHVVLPDPAATHDGPQSPGAGGPTCSATNLS 132

Query: 1036 PAGALQ 1041
                L+
Sbjct: 133  RVAGLE 138


>gi|167736355 mucin 4 isoform a [Homo sapiens]
          Length = 5284

 Score = 30.4 bits (67), Expect = 9.2
 Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 3/59 (5%)

Query: 980  ASLGPENAAAVTHAQRRRLSPL--QLQSLQQALDGAKTHSWQDA-PASAGPTRTSSSRS 1035
            AS  P+ AAA+TH  +   +    Q Q+ + A  G++T S   A P+S+G + T+ S S
Sbjct: 760  ASTSPDTAAAMTHTHQAESTEASGQTQTSEPASSGSRTTSAGTATPSSSGASGTTPSGS 818


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.133    0.392 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,579,955
Number of Sequences: 37866
Number of extensions: 1582549
Number of successful extensions: 4580
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 4546
Number of HSP's gapped (non-prelim): 37
length of query: 1060
length of database: 18,247,518
effective HSP length: 113
effective length of query: 947
effective length of database: 13,968,660
effective search space: 13228321020
effective search space used: 13228321020
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 67 (30.4 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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