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Search of human proteins with 239508897
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239508897 PREDICTED: similar to hCG1983816 [Homo sapiens]
(265 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239749152 PREDICTED: similar to hCG1983816 [Homo sapiens] 542 e-154
gi|239508897 PREDICTED: similar to hCG1983816 [Homo sapiens] 542 e-154
gi|239754606 PREDICTED: similar to hCG1983816 [Homo sapiens] 502 e-142
gi|7705387 GTF2I repeat domain containing 1 isoform 1 [Homo sapi... 389 e-108
gi|15011924 GTF2I repeat domain containing 1 isoform 2 [Homo sap... 350 9e-97
gi|14670354 general transcription factor II, i isoform 3 [Homo s... 131 5e-31
gi|14670352 general transcription factor II, i isoform 2 [Homo s... 131 5e-31
gi|14670350 general transcription factor II, i isoform 1 [Homo s... 131 5e-31
gi|169881252 general transcription factor II, i isoform 4 [Homo ... 131 5e-31
gi|48762700 GTF2I repeat domain containing 2 [Homo sapiens] 88 9e-18
gi|51241788 GTF2I repeat domain containing 2B [Homo sapiens] 88 9e-18
gi|239752592 PREDICTED: hypothetical protein XP_002348308, parti... 38 0.010
gi|239746033 PREDICTED: hypothetical protein XP_002344174 [Homo ... 38 0.010
gi|239757552 PREDICTED: similar to hCG2006635, partial [Homo sap... 36 0.040
gi|122937289 kinesin family member 18B [Homo sapiens] 31 0.98
gi|24497618 ATPase family, AAA domain containing 2 [Homo sapiens] 30 2.2
gi|34577118 dopey family member 1 [Homo sapiens] 29 4.8
>gi|239749152 PREDICTED: similar to hCG1983816 [Homo sapiens]
Length = 265
Score = 542 bits (1397), Expect = e-154
Identities = 265/265 (100%), Positives = 265/265 (100%)
Query: 1 MHPEELFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRPKLLTEGVKEPIVDSQ 60
MHPEELFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRPKLLTEGVKEPIVDSQ
Sbjct: 1 MHPEELFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRPKLLTEGVKEPIVDSQ 60
Query: 61 GTASSLGFSPPALPPERDSRDPLVGESLKRQGFQENYDARLLRIDIANTLREQVQELFNK 120
GTASSLGFSPPALPPERDSRDPLVGESLKRQGFQENYDARLLRIDIANTLREQVQELFNK
Sbjct: 61 GTASSLGFSPPALPPERDSRDPLVGESLKRQGFQENYDARLLRIDIANTLREQVQELFNK 120
Query: 121 TYGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKPFGSQNLERILAMANKITFTV 180
TYGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKPFGSQNLERILAMANKITFTV
Sbjct: 121 TYGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKPFGSQNLERILAMANKITFTV 180
Query: 181 TRPFQGLIRKPDEDDTNRLGEVILQEQVKELFNEKYSQCLWLLQQQQHHISEGRPFAEIC 240
TRPFQGLIRKPDEDDTNRLGEVILQEQVKELFNEKYSQCLWLLQQQQHHISEGRPFAEIC
Sbjct: 181 TRPFQGLIRKPDEDDTNRLGEVILQEQVKELFNEKYSQCLWLLQQQQHHISEGRPFAEIC 240
Query: 241 NDAKVPGYTEPFTRHLGATWHDGSD 265
NDAKVPGYTEPFTRHLGATWHDGSD
Sbjct: 241 NDAKVPGYTEPFTRHLGATWHDGSD 265
>gi|239508897 PREDICTED: similar to hCG1983816 [Homo sapiens]
Length = 265
Score = 542 bits (1397), Expect = e-154
Identities = 265/265 (100%), Positives = 265/265 (100%)
Query: 1 MHPEELFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRPKLLTEGVKEPIVDSQ 60
MHPEELFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRPKLLTEGVKEPIVDSQ
Sbjct: 1 MHPEELFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRPKLLTEGVKEPIVDSQ 60
Query: 61 GTASSLGFSPPALPPERDSRDPLVGESLKRQGFQENYDARLLRIDIANTLREQVQELFNK 120
GTASSLGFSPPALPPERDSRDPLVGESLKRQGFQENYDARLLRIDIANTLREQVQELFNK
Sbjct: 61 GTASSLGFSPPALPPERDSRDPLVGESLKRQGFQENYDARLLRIDIANTLREQVQELFNK 120
Query: 121 TYGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKPFGSQNLERILAMANKITFTV 180
TYGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKPFGSQNLERILAMANKITFTV
Sbjct: 121 TYGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKPFGSQNLERILAMANKITFTV 180
Query: 181 TRPFQGLIRKPDEDDTNRLGEVILQEQVKELFNEKYSQCLWLLQQQQHHISEGRPFAEIC 240
TRPFQGLIRKPDEDDTNRLGEVILQEQVKELFNEKYSQCLWLLQQQQHHISEGRPFAEIC
Sbjct: 181 TRPFQGLIRKPDEDDTNRLGEVILQEQVKELFNEKYSQCLWLLQQQQHHISEGRPFAEIC 240
Query: 241 NDAKVPGYTEPFTRHLGATWHDGSD 265
NDAKVPGYTEPFTRHLGATWHDGSD
Sbjct: 241 NDAKVPGYTEPFTRHLGATWHDGSD 265
>gi|239754606 PREDICTED: similar to hCG1983816 [Homo sapiens]
Length = 298
Score = 502 bits (1293), Expect = e-142
Identities = 248/250 (99%), Positives = 249/250 (99%)
Query: 1 MHPEELFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRPKLLTEGVKEPIVDSQ 60
MHPEELFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRPKLLTEGVKEPIVDSQ
Sbjct: 1 MHPEELFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRPKLLTEGVKEPIVDSQ 60
Query: 61 GTASSLGFSPPALPPERDSRDPLVGESLKRQGFQENYDARLLRIDIANTLREQVQELFNK 120
GTASSLGFSPPALPPERDSRDPLVGESLKRQGFQENYDARLLRIDIANTLREQVQELFNK
Sbjct: 61 GTASSLGFSPPALPPERDSRDPLVGESLKRQGFQENYDARLLRIDIANTLREQVQELFNK 120
Query: 121 TYGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKPFGSQNLERILAMANKITFTV 180
TYGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKPFGSQNLERILAMANKITFTV
Sbjct: 121 TYGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKPFGSQNLERILAMANKITFTV 180
Query: 181 TRPFQGLIRKPDEDDTNRLGEVILQEQVKELFNEKYSQCLWLLQQQQHHISEGRPFAEIC 240
TRPFQGLIRKPDEDDTNRLGEVILQEQVKELFNEKYSQCLWLLQQQQHHISEGRPFAEIC
Sbjct: 181 TRPFQGLIRKPDEDDTNRLGEVILQEQVKELFNEKYSQCLWLLQQQQHHISEGRPFAEIC 240
Query: 241 NDAKVPGYTE 250
NDAKVPG +E
Sbjct: 241 NDAKVPGESE 250
>gi|7705387 GTF2I repeat domain containing 1 isoform 1 [Homo
sapiens]
Length = 959
Score = 389 bits (999), Expect = e-108
Identities = 215/296 (72%), Positives = 229/296 (77%), Gaps = 50/296 (16%)
Query: 1 MHPEELFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRPKLLTEGVKEPIVDSQ 60
MHPEELFVVGLPEGISLRRPNCFGIAKL KILEASNSIQFVIKRP+LLTEGVKEPI+DSQ
Sbjct: 596 MHPEELFVVGLPEGISLRRPNCFGIAKLRKILEASNSIQFVIKRPELLTEGVKEPIMDSQ 655
Query: 61 GTASSLGFSPPALPPERDSRDPLVGESLKRQGFQENYDARLLRIDIANTLREQVQELFNK 120
GTASSLGFSPPALPPERDS DPLV ESLKRQGFQENYDARL RIDIANTLREQVQ+LFNK
Sbjct: 656 GTASSLGFSPPALPPERDSGDPLVDESLKRQGFQENYDARLSRIDIANTLREQVQDLFNK 715
Query: 121 TYGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKP--FGSQNLERILAMANKITF 178
YGEALGIKYPVQVPYK IKSNPGS+IIE LPPGI FRKP FGSQNLERILA+A+KI F
Sbjct: 716 KYGEALGIKYPVQVPYKRIKSNPGSVIIEGLPPGIPFRKPCTFGSQNLERILAVADKIKF 775
Query: 179 TVTRPFQGLIRKPDEDDTNRLGE-VILQEQVKELFNEKYSQCLWL--------------- 222
TVTRPFQGLI KPDEDD NRLGE VIL+EQVKELFNEKY + L L
Sbjct: 776 TVTRPFQGLIPKPDEDDANRLGEKVILREQVKELFNEKYGEALGLNRPVLVPYKLIRDSP 835
Query: 223 ----------------------------LQQQQH----HISEGRPFAEICNDAKVP 246
L+ ++H I++ +PFAEICNDAKVP
Sbjct: 836 DAVEVTGLPDDIPFRNPNTYDIHRLEKILKAREHVRMVIINQLQPFAEICNDAKVP 891
Score = 71.2 bits (173), Expect = 9e-13
Identities = 61/218 (27%), Positives = 88/218 (40%), Gaps = 49/218 (22%)
Query: 52 VKEPIVDSQGTASSLGFSPPALPPERDS---RDPLVGESLKRQGFQENYDARLLRIDIAN 108
++ + D T+ + S P P DS + L + L E D+
Sbjct: 504 IQVTVPDPSPTSEEMTDSMPGHLPSEDSGYGMEMLTDKGLSEDARPEERPVEDSHGDVIR 563
Query: 109 TLREQVQELFNKTYGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKP--FGSQNL 166
LR+QV+ LFN Y +A+GI PV+VPY +P + + LP GI R+P FG L
Sbjct: 564 PLRKQVELLFNTRYAKAIGISEPVKVPYSKFLMHPEELFVVGLPEGISLRRPNCFGIAKL 623
Query: 167 ERILAMANKITFTVTRP-------------FQGLIRK--------PDEDDTN-------- 197
+IL +N I F + RP QG P E D+
Sbjct: 624 RKILEASNSIQFVIKRPELLTEGVKEPIMDSQGTASSLGFSPPALPPERDSGDPLVDESL 683
Query: 198 -----------RLGEV----ILQEQVKELFNEKYSQCL 220
RL + L+EQV++LFN+KY + L
Sbjct: 684 KRQGFQENYDARLSRIDIANTLREQVQDLFNKKYGEAL 721
Score = 65.5 bits (158), Expect = 5e-11
Identities = 38/92 (41%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
Query: 95 ENYDARLLRIDIANTLREQVQELFNKTYGEALGIKYPVQVPYKWIKSNPGSMIIEELPPG 154
E +DA + + NTLRE VQ LFN Y EALG+ + V VPY+ I +P ++ I +P
Sbjct: 336 EKWDAFIKETEDINTLRECVQILFNSRYAEALGLDHMVPVPYRKIACDPEAVEIVGIPDK 395
Query: 155 ILFRKP--FGSQNLERILAMANKITFTVTRPF 184
I F++P +G L+RIL + I F + R F
Sbjct: 396 IPFKRPCTYGVPKLKRILEERHSIHFIIKRMF 427
Score = 60.5 bits (145), Expect = 2e-09
Identities = 38/118 (32%), Positives = 60/118 (50%), Gaps = 10/118 (8%)
Query: 70 PPALPPERDSRDPLVGESLKRQGFQENYDARLLRIDIANTLREQVQELFNKTYGEALGIK 129
P A P++ R G SL R + D LLR + V+E+F+ Y EALG
Sbjct: 96 PEAEHPKKVQRGEGGGRSLPRSSLEHGSDVYLLR--------KMVEEVFDVLYSEALGRA 147
Query: 130 YPVQVPYKWIKSNPGSMIIEELPPGILFRKP--FGSQNLERILAMANKITFTVTRPFQ 185
V +PY+ + PG + ++ LP G+ FR+P + + L IL +++I F + RP +
Sbjct: 148 SVVPLPYERLLREPGLLAVQGLPEGLAFRRPAEYDPKALMAILEHSHRIRFKLKRPLE 205
Score = 45.8 bits (107), Expect = 4e-05
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 3 PEELFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRPKLLTEGVKEPIVDSQGT 62
PE + +VG+P+ I +RP +G+ KL +ILE +SI F+IKR E I
Sbjct: 384 PEAVEIVGIPDKIPFKRPCTYGVPKLKRILEERHSIHFIIKRM------FDERIFTGNKF 437
Query: 63 ASSLGFSPPALPPERDSRD 81
PA PPE S +
Sbjct: 438 TKDTTKLEPASPPEDTSAE 456
Score = 40.0 bits (92), Expect = 0.002
Identities = 61/231 (26%), Positives = 93/231 (40%), Gaps = 33/231 (14%)
Query: 3 PEELFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRP--------KLLTEGVKE 54
P L V GLPEG++ RRP + L ILE S+ I+F +KRP K L E
Sbjct: 161 PGLLAVQGLPEGLAFRRPAEYDPKALMAILEHSHRIRFKLKRPLEDGGRDSKALVELNGV 220
Query: 55 PIVDSQGTASSLGFSPPALPPERDSRDPLVGESLKRQGFQENYDARLLRIDIANTLREQV 114
++ L P +PP+ P S F Y L + +RE
Sbjct: 221 SLIPKGSRDCGLHGQAPKVPPQ---DLPPTATSSSMASFL--YSTALPN----HAIRELK 271
Query: 115 QELFNKTYGEA-LGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKPFGS--QNLERILA 171
QE + + LG+ P+ P K + S + P G P G QN+
Sbjct: 272 QEAPSCPLAPSDLGLSRPMPEP-KATGAQDFSDCCGQKPTG-----PGGPLIQNVHASKR 325
Query: 172 MANKITFTVTRPFQGLIRKPDEDDTNRLGEVILQEQVKELFNEKYSQCLWL 222
+ I + + I++ ++ +T L+E V+ LFN +Y++ L L
Sbjct: 326 ILFSIVHDKSEKWDAFIKETEDINT-------LRECVQILFNSRYAEALGL 369
>gi|15011924 GTF2I repeat domain containing 1 isoform 2 [Homo
sapiens]
Length = 944
Score = 350 bits (897), Expect = 9e-97
Identities = 201/296 (67%), Positives = 214/296 (72%), Gaps = 65/296 (21%)
Query: 1 MHPEELFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRPKLLTEGVKEPIVDSQ 60
MHPEELFVVGLPEGISLRRPNCFGIAKL KILEASNSIQFVIKRP+LLTEGVKEPIVDSQ
Sbjct: 596 MHPEELFVVGLPEGISLRRPNCFGIAKLRKILEASNSIQFVIKRPELLTEGVKEPIVDSQ 655
Query: 61 GTASSLGFSPPALPPERDSRDPLVGESLKRQGFQENYDARLLRIDIANTLREQVQELFNK 120
ERDS DPLV ESLKRQGFQENYDARL RIDIANTLREQVQ+LFNK
Sbjct: 656 ---------------ERDSGDPLVDESLKRQGFQENYDARLSRIDIANTLREQVQDLFNK 700
Query: 121 TYGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKP--FGSQNLERILAMANKITF 178
YGEALGIKYPVQVPYK IKSNPGS+IIE LPPGI FRKP FGSQNLERILA+A+KI F
Sbjct: 701 KYGEALGIKYPVQVPYKRIKSNPGSVIIEGLPPGIPFRKPCTFGSQNLERILAVADKIKF 760
Query: 179 TVTRPFQGLIRKPDEDDTNRLGE-VILQEQVKELFNEKYSQCLWL--------------- 222
TVTRPFQGLI KPDEDD NRLGE VIL+EQVKELFNEKY + L L
Sbjct: 761 TVTRPFQGLIPKPDEDDANRLGEKVILREQVKELFNEKYGEALGLNRPVLVPYKLIRDSP 820
Query: 223 ----------------------------LQQQQH----HISEGRPFAEICNDAKVP 246
L+ ++H I++ +PFAEICNDAKVP
Sbjct: 821 DAVEVTGLPDDIPFRNPNTYDIHRLEKILKAREHVRMVIINQLQPFAEICNDAKVP 876
Score = 75.1 bits (183), Expect = 6e-14
Identities = 58/203 (28%), Positives = 88/203 (43%), Gaps = 34/203 (16%)
Query: 52 VKEPIVDSQGTASSLGFSPPALPPERDS---RDPLVGESLKRQGFQENYDARLLRIDIAN 108
++ + D T+ + S P P DS + L + L E D+
Sbjct: 504 IQVTVPDPSPTSEEMTDSMPGHLPSEDSGYGMEMLTDKGLSEDARPEERPVEDSHGDVIR 563
Query: 109 TLREQVQELFNKTYGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKP--FGSQNL 166
LR+QV+ LFN Y +A+GI PV+VPY +P + + LP GI R+P FG L
Sbjct: 564 PLRKQVELLFNTRYAKAIGISEPVKVPYSKFLMHPEELFVVGLPEGISLRRPNCFGIAKL 623
Query: 167 ERILAMANKITFTVTRP--FQGLIRKP-----------------------DEDDTNRLGE 201
+IL +N I F + RP +++P E+ RL
Sbjct: 624 RKILEASNSIQFVIKRPELLTEGVKEPIVDSQERDSGDPLVDESLKRQGFQENYDARLSR 683
Query: 202 V----ILQEQVKELFNEKYSQCL 220
+ L+EQV++LFN+KY + L
Sbjct: 684 IDIANTLREQVQDLFNKKYGEAL 706
Score = 65.5 bits (158), Expect = 5e-11
Identities = 38/92 (41%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
Query: 95 ENYDARLLRIDIANTLREQVQELFNKTYGEALGIKYPVQVPYKWIKSNPGSMIIEELPPG 154
E +DA + + NTLRE VQ LFN Y EALG+ + V VPY+ I +P ++ I +P
Sbjct: 336 EKWDAFIKETEDINTLRECVQILFNSRYAEALGLDHMVPVPYRKIACDPEAVEIVGIPDK 395
Query: 155 ILFRKP--FGSQNLERILAMANKITFTVTRPF 184
I F++P +G L+RIL + I F + R F
Sbjct: 396 IPFKRPCTYGVPKLKRILEERHSIHFIIKRMF 427
Score = 60.5 bits (145), Expect = 2e-09
Identities = 38/118 (32%), Positives = 60/118 (50%), Gaps = 10/118 (8%)
Query: 70 PPALPPERDSRDPLVGESLKRQGFQENYDARLLRIDIANTLREQVQELFNKTYGEALGIK 129
P A P++ R G SL R + D LLR + V+E+F+ Y EALG
Sbjct: 96 PEAEHPKKVQRGEGGGRSLPRSSLEHGSDVYLLR--------KMVEEVFDVLYSEALGRA 147
Query: 130 YPVQVPYKWIKSNPGSMIIEELPPGILFRKP--FGSQNLERILAMANKITFTVTRPFQ 185
V +PY+ + PG + ++ LP G+ FR+P + + L IL +++I F + RP +
Sbjct: 148 SVVPLPYERLLREPGLLAVQGLPEGLAFRRPAEYDPKALMAILEHSHRIRFKLKRPLE 205
Score = 45.8 bits (107), Expect = 4e-05
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 3 PEELFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRPKLLTEGVKEPIVDSQGT 62
PE + +VG+P+ I +RP +G+ KL +ILE +SI F+IKR E I
Sbjct: 384 PEAVEIVGIPDKIPFKRPCTYGVPKLKRILEERHSIHFIIKRM------FDERIFTGNKF 437
Query: 63 ASSLGFSPPALPPERDSRD 81
PA PPE S +
Sbjct: 438 TKDTTKLEPASPPEDTSAE 456
Score = 40.0 bits (92), Expect = 0.002
Identities = 61/231 (26%), Positives = 93/231 (40%), Gaps = 33/231 (14%)
Query: 3 PEELFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRP--------KLLTEGVKE 54
P L V GLPEG++ RRP + L ILE S+ I+F +KRP K L E
Sbjct: 161 PGLLAVQGLPEGLAFRRPAEYDPKALMAILEHSHRIRFKLKRPLEDGGRDSKALVELNGV 220
Query: 55 PIVDSQGTASSLGFSPPALPPERDSRDPLVGESLKRQGFQENYDARLLRIDIANTLREQV 114
++ L P +PP+ P S F Y L + +RE
Sbjct: 221 SLIPKGSRDCGLHGQAPKVPPQ---DLPPTATSSSMASFL--YSTALPN----HAIRELK 271
Query: 115 QELFNKTYGEA-LGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKPFGS--QNLERILA 171
QE + + LG+ P+ P K + S + P G P G QN+
Sbjct: 272 QEAPSCPLAPSDLGLSRPMPEP-KATGAQDFSDCCGQKPTG-----PGGPLIQNVHASKR 325
Query: 172 MANKITFTVTRPFQGLIRKPDEDDTNRLGEVILQEQVKELFNEKYSQCLWL 222
+ I + + I++ ++ +T L+E V+ LFN +Y++ L L
Sbjct: 326 ILFSIVHDKSEKWDAFIKETEDINT-------LRECVQILFNSRYAEALGL 369
>gi|14670354 general transcription factor II, i isoform 3 [Homo
sapiens]
Length = 977
Score = 131 bits (330), Expect = 5e-31
Identities = 74/213 (34%), Positives = 121/213 (56%), Gaps = 15/213 (7%)
Query: 3 PEELFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRPKLLTEGVKEPIVDSQGT 62
PE+ +V GLPEG+ RRP+ FGI +L KIL I+F+IK+P++ +KE
Sbjct: 745 PEDFYVEGLPEGVPFRRPSTFGIPRLEKILRNKAKIKFIIKKPEMFETAIKE-------- 796
Query: 63 ASSLGFSPP----ALPPERDSRDPLVGESLKRQGFQENYDARLLRIDIANTLREQVQELF 118
S+ SPP + P + + ++ + ++ + RL +++ A LREQV +LF
Sbjct: 797 -STSSKSPPRKINSSPNVNTTASGVEDLNIIQVTIPDDDNERLSKVEKARQLREQVNDLF 855
Query: 119 NKTYGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKP--FGSQNLERILAMANKI 176
++ +GEA+G+ +PV+VPY+ I NPG ++++ +PPG+ F+ P ++ RIL A I
Sbjct: 856 SRKFGEAIGMGFPVKVPYRKITINPGCVVVDGMPPGVSFKAPSYLEISSMRRILDSAEFI 915
Query: 177 TFTVTRPFQGLIRKPDEDDTNRLGEVILQEQVK 209
FTV RPF GL+ D + ++QE +
Sbjct: 916 KFTVIRPFPGLVINNQLVDQSESEGPVIQESAE 948
Score = 111 bits (278), Expect = 6e-25
Identities = 68/184 (36%), Positives = 97/184 (52%), Gaps = 37/184 (20%)
Query: 2 HPEELFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRPKLLTEGVKEPIVDSQG 61
HP +L+V GLPE I R P+ +GI +L KI++ N I+FVIKRP+LLT E
Sbjct: 477 HPNDLYVEGLPENIPFRSPSWYGIPRLEKIIQVGNRIKFVIKRPELLTHSTTE------- 529
Query: 62 TASSLGFSPPALPPERDSRDPLVGESLKRQGFQENYDARLLRIDIANTLREQVQELFNKT 121
V + +E+++ R+ + LR+QV+E+FN
Sbjct: 530 ----------------------VTQPRTNTPVKEDWNVRITK------LRKQVEEIFNLK 561
Query: 122 YGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKP--FGSQNLERILAMANKITFT 179
+ +ALG+ V+VPY +SNP + +E LP GI FR P FG LERI+ +NKI F
Sbjct: 562 FAQALGLTEAVKVPYPVFESNPEFLYVEGLPEGIPFRSPTWFGIPRLERIVRGSNKIKFV 621
Query: 180 VTRP 183
V +P
Sbjct: 622 VKKP 625
Score = 107 bits (268), Expect = 8e-24
Identities = 78/235 (33%), Positives = 116/235 (49%), Gaps = 48/235 (20%)
Query: 2 HPEELFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRPKLLTEGVKEPIVDSQG 61
H E+L+V GLPEGI RRP+ +GI +L +IL A I+FVIK+ +LL
Sbjct: 372 HVEDLYVEGLPEGIPFRRPSTYGIPRLERILLAKERIRFVIKKHELL-----------NS 420
Query: 62 TASSLGFSPPALPPERDSRDPLVGESLKRQGFQENYDARLLRIDIANTLREQVQELFNKT 121
T L PA G +E + AR+ + LR+ V +LF K
Sbjct: 421 TREDLQLDKPA------------------SGVKEEWYARITK------LRKMVDQLFCKK 456
Query: 122 YGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKP--FGSQNLERILAMANKITFT 179
+ EALG VPY+ +++P + +E LP I FR P +G LE+I+ + N+I F
Sbjct: 457 FAEALGSTEAKAVPYQKFEAHPNDLYVEGLPENIPFRSPSWYGIPRLEKIIQVGNRIKFV 516
Query: 180 VTRP----------FQGLIRKPDEDDTNRLGEVILQEQVKELFNEKYSQCLWLLQ 224
+ RP Q P ++D N + L++QV+E+FN K++Q L L +
Sbjct: 517 IKRPELLTHSTTEVTQPRTNTPVKEDWN-VRITKLRKQVEEIFNLKFAQALGLTE 570
Score = 101 bits (251), Expect = 8e-22
Identities = 82/286 (28%), Positives = 133/286 (46%), Gaps = 71/286 (24%)
Query: 2 HPEELFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRPKLLTEGVKEPIVDSQG 61
+PE L+V GLPEGI R P FGI +L +I+ SN I+FV+K+P+L+ + P + S+
Sbjct: 582 NPEFLYVEGLPEGIPFRSPTWFGIPRLERIVRGSNKIKFVVKKPELVISYLP-PGMASKI 640
Query: 62 TASSLGFSPPALPPERDSRDPLVGESL--------------------------KRQGFQE 95
+L P +S+ P + ++ K +G +
Sbjct: 641 NTKALQSPKRPRSPGSNSKVPEIEVTVEGPNNNNPQTSAVRTPTQTNGSNVPFKPRGREF 700
Query: 96 NYDARLLRIDIANTLREQVQELFNKTYGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGI 155
+++A +I L+++V+ LFN+ GEALG+K V+VP+ +S P +E LP G+
Sbjct: 701 SFEAWNAKI---TDLKQKVENLFNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGV 757
Query: 156 LFRKP--FGSQNLERILAMANKITFTVTRP--FQGLIRKP-------------------- 191
FR+P FG LE+IL KI F + +P F+ I++
Sbjct: 758 PFRRPSTFGIPRLEKILRNKAKIKFIIKKPEMFETAIKESTSSKSPPRKINSSPNVNTTA 817
Query: 192 -------------DEDDTNRLGEV----ILQEQVKELFNEKYSQCL 220
+DD RL +V L+EQV +LF+ K+ + +
Sbjct: 818 SGVEDLNIIQVTIPDDDNERLSKVEKARQLREQVNDLFSRKFGEAI 863
Score = 65.1 bits (157), Expect = 6e-11
Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 22/170 (12%)
Query: 68 FSPPALPPERDSRD----PLVGESLKRQGFQENYDARLLRIDIANTLREQVQELFNKTYG 123
+SPP+ P+ + P + KR+ + N++ RI LR+QV+ELF + Y
Sbjct: 297 YSPPSKRPKANELPQPPVPEPANAGKRKVREFNFEKWNARI---TDLRKQVEELFERKYA 353
Query: 124 EALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKP--FGSQNLERILAMANKITFTVT 181
+A+ K PV +PY +S+ + +E LP GI FR+P +G LERIL +I F +
Sbjct: 354 QAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLERILLAKERIRFVIK 413
Query: 182 RPFQGLIRKPDED---DTNRLGE--------VILQEQVKELFNEKYSQCL 220
+ L+ ED D G L++ V +LF +K+++ L
Sbjct: 414 K--HELLNSTREDLQLDKPASGVKEEWYARITKLRKMVDQLFCKKFAEAL 461
Score = 49.3 bits (116), Expect = 3e-06
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 109 TLREQVQELFNKTYGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKP--FGSQNL 166
TLR+ V++ F YG+ALG V VPY+ + + +++++ LP G+ F+ P + L
Sbjct: 111 TLRKTVEDYFCFCYGKALGKSTVVPVPYEKMLRDQSAVVVQGLPEGVAFKHPENYDLATL 170
Query: 167 ERILAMANKITFTVTRPF 184
+ IL I+F + RPF
Sbjct: 171 KWILENKAGISFIIKRPF 188
Score = 38.9 bits (89), Expect = 0.005
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 8 VVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRPKL 47
V GLPEG++ + P + +A L ILE I F+IKRP L
Sbjct: 150 VQGLPEGVAFKHPENYDLATLKWILENKAGISFIIKRPFL 189
Score = 33.5 bits (75), Expect = 0.20
Identities = 14/45 (31%), Positives = 29/45 (64%)
Query: 1 MHPEELFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRP 45
++P + V G+P G+S + P+ I+ + +IL+++ I+F + RP
Sbjct: 878 INPGCVVVDGMPPGVSFKAPSYLEISSMRRILDSAEFIKFTVIRP 922
>gi|14670352 general transcription factor II, i isoform 2 [Homo
sapiens]
Length = 978
Score = 131 bits (330), Expect = 5e-31
Identities = 74/213 (34%), Positives = 121/213 (56%), Gaps = 15/213 (7%)
Query: 3 PEELFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRPKLLTEGVKEPIVDSQGT 62
PE+ +V GLPEG+ RRP+ FGI +L KIL I+F+IK+P++ +KE
Sbjct: 746 PEDFYVEGLPEGVPFRRPSTFGIPRLEKILRNKAKIKFIIKKPEMFETAIKE-------- 797
Query: 63 ASSLGFSPP----ALPPERDSRDPLVGESLKRQGFQENYDARLLRIDIANTLREQVQELF 118
S+ SPP + P + + ++ + ++ + RL +++ A LREQV +LF
Sbjct: 798 -STSSKSPPRKINSSPNVNTTASGVEDLNIIQVTIPDDDNERLSKVEKARQLREQVNDLF 856
Query: 119 NKTYGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKP--FGSQNLERILAMANKI 176
++ +GEA+G+ +PV+VPY+ I NPG ++++ +PPG+ F+ P ++ RIL A I
Sbjct: 857 SRKFGEAIGMGFPVKVPYRKITINPGCVVVDGMPPGVSFKAPSYLEISSMRRILDSAEFI 916
Query: 177 TFTVTRPFQGLIRKPDEDDTNRLGEVILQEQVK 209
FTV RPF GL+ D + ++QE +
Sbjct: 917 KFTVIRPFPGLVINNQLVDQSESEGPVIQESAE 949
Score = 111 bits (278), Expect = 6e-25
Identities = 68/184 (36%), Positives = 97/184 (52%), Gaps = 37/184 (20%)
Query: 2 HPEELFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRPKLLTEGVKEPIVDSQG 61
HP +L+V GLPE I R P+ +GI +L KI++ N I+FVIKRP+LLT E
Sbjct: 478 HPNDLYVEGLPENIPFRSPSWYGIPRLEKIIQVGNRIKFVIKRPELLTHSTTE------- 530
Query: 62 TASSLGFSPPALPPERDSRDPLVGESLKRQGFQENYDARLLRIDIANTLREQVQELFNKT 121
V + +E+++ R+ + LR+QV+E+FN
Sbjct: 531 ----------------------VTQPRTNTPVKEDWNVRITK------LRKQVEEIFNLK 562
Query: 122 YGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKP--FGSQNLERILAMANKITFT 179
+ +ALG+ V+VPY +SNP + +E LP GI FR P FG LERI+ +NKI F
Sbjct: 563 FAQALGLTEAVKVPYPVFESNPEFLYVEGLPEGIPFRSPTWFGIPRLERIVRGSNKIKFV 622
Query: 180 VTRP 183
V +P
Sbjct: 623 VKKP 626
Score = 107 bits (268), Expect = 8e-24
Identities = 78/235 (33%), Positives = 116/235 (49%), Gaps = 48/235 (20%)
Query: 2 HPEELFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRPKLLTEGVKEPIVDSQG 61
H E+L+V GLPEGI RRP+ +GI +L +IL A I+FVIK+ +LL
Sbjct: 373 HVEDLYVEGLPEGIPFRRPSTYGIPRLERILLAKERIRFVIKKHELL-----------NS 421
Query: 62 TASSLGFSPPALPPERDSRDPLVGESLKRQGFQENYDARLLRIDIANTLREQVQELFNKT 121
T L PA G +E + AR+ + LR+ V +LF K
Sbjct: 422 TREDLQLDKPA------------------SGVKEEWYARITK------LRKMVDQLFCKK 457
Query: 122 YGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKP--FGSQNLERILAMANKITFT 179
+ EALG VPY+ +++P + +E LP I FR P +G LE+I+ + N+I F
Sbjct: 458 FAEALGSTEAKAVPYQKFEAHPNDLYVEGLPENIPFRSPSWYGIPRLEKIIQVGNRIKFV 517
Query: 180 VTRP----------FQGLIRKPDEDDTNRLGEVILQEQVKELFNEKYSQCLWLLQ 224
+ RP Q P ++D N + L++QV+E+FN K++Q L L +
Sbjct: 518 IKRPELLTHSTTEVTQPRTNTPVKEDWN-VRITKLRKQVEEIFNLKFAQALGLTE 571
Score = 101 bits (251), Expect = 8e-22
Identities = 82/286 (28%), Positives = 133/286 (46%), Gaps = 71/286 (24%)
Query: 2 HPEELFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRPKLLTEGVKEPIVDSQG 61
+PE L+V GLPEGI R P FGI +L +I+ SN I+FV+K+P+L+ + P + S+
Sbjct: 583 NPEFLYVEGLPEGIPFRSPTWFGIPRLERIVRGSNKIKFVVKKPELVISYLP-PGMASKI 641
Query: 62 TASSLGFSPPALPPERDSRDPLVGESL--------------------------KRQGFQE 95
+L P +S+ P + ++ K +G +
Sbjct: 642 NTKALQSPKRPRSPGSNSKVPEIEVTVEGPNNNNPQTSAVRTPTQTNGSNVPFKPRGREF 701
Query: 96 NYDARLLRIDIANTLREQVQELFNKTYGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGI 155
+++A +I L+++V+ LFN+ GEALG+K V+VP+ +S P +E LP G+
Sbjct: 702 SFEAWNAKI---TDLKQKVENLFNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGV 758
Query: 156 LFRKP--FGSQNLERILAMANKITFTVTRP--FQGLIRKP-------------------- 191
FR+P FG LE+IL KI F + +P F+ I++
Sbjct: 759 PFRRPSTFGIPRLEKILRNKAKIKFIIKKPEMFETAIKESTSSKSPPRKINSSPNVNTTA 818
Query: 192 -------------DEDDTNRLGEV----ILQEQVKELFNEKYSQCL 220
+DD RL +V L+EQV +LF+ K+ + +
Sbjct: 819 SGVEDLNIIQVTIPDDDNERLSKVEKARQLREQVNDLFSRKFGEAI 864
Score = 65.1 bits (157), Expect = 6e-11
Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 22/170 (12%)
Query: 68 FSPPALPPERDSRD----PLVGESLKRQGFQENYDARLLRIDIANTLREQVQELFNKTYG 123
+SPP+ P+ + P + KR+ + N++ RI LR+QV+ELF + Y
Sbjct: 298 YSPPSKRPKANELPQPPVPEPANAGKRKVREFNFEKWNARI---TDLRKQVEELFERKYA 354
Query: 124 EALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKP--FGSQNLERILAMANKITFTVT 181
+A+ K PV +PY +S+ + +E LP GI FR+P +G LERIL +I F +
Sbjct: 355 QAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLERILLAKERIRFVIK 414
Query: 182 RPFQGLIRKPDED---DTNRLGE--------VILQEQVKELFNEKYSQCL 220
+ L+ ED D G L++ V +LF +K+++ L
Sbjct: 415 K--HELLNSTREDLQLDKPASGVKEEWYARITKLRKMVDQLFCKKFAEAL 462
Score = 49.3 bits (116), Expect = 3e-06
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 109 TLREQVQELFNKTYGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKP--FGSQNL 166
TLR+ V++ F YG+ALG V VPY+ + + +++++ LP G+ F+ P + L
Sbjct: 111 TLRKTVEDYFCFCYGKALGKSTVVPVPYEKMLRDQSAVVVQGLPEGVAFKHPENYDLATL 170
Query: 167 ERILAMANKITFTVTRPF 184
+ IL I+F + RPF
Sbjct: 171 KWILENKAGISFIIKRPF 188
Score = 38.9 bits (89), Expect = 0.005
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 8 VVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRPKL 47
V GLPEG++ + P + +A L ILE I F+IKRP L
Sbjct: 150 VQGLPEGVAFKHPENYDLATLKWILENKAGISFIIKRPFL 189
Score = 33.5 bits (75), Expect = 0.20
Identities = 14/45 (31%), Positives = 29/45 (64%)
Query: 1 MHPEELFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRP 45
++P + V G+P G+S + P+ I+ + +IL+++ I+F + RP
Sbjct: 879 INPGCVVVDGMPPGVSFKAPSYLEISSMRRILDSAEFIKFTVIRP 923
>gi|14670350 general transcription factor II, i isoform 1 [Homo
sapiens]
Length = 998
Score = 131 bits (330), Expect = 5e-31
Identities = 74/213 (34%), Positives = 121/213 (56%), Gaps = 15/213 (7%)
Query: 3 PEELFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRPKLLTEGVKEPIVDSQGT 62
PE+ +V GLPEG+ RRP+ FGI +L KIL I+F+IK+P++ +KE
Sbjct: 766 PEDFYVEGLPEGVPFRRPSTFGIPRLEKILRNKAKIKFIIKKPEMFETAIKE-------- 817
Query: 63 ASSLGFSPP----ALPPERDSRDPLVGESLKRQGFQENYDARLLRIDIANTLREQVQELF 118
S+ SPP + P + + ++ + ++ + RL +++ A LREQV +LF
Sbjct: 818 -STSSKSPPRKINSSPNVNTTASGVEDLNIIQVTIPDDDNERLSKVEKARQLREQVNDLF 876
Query: 119 NKTYGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKP--FGSQNLERILAMANKI 176
++ +GEA+G+ +PV+VPY+ I NPG ++++ +PPG+ F+ P ++ RIL A I
Sbjct: 877 SRKFGEAIGMGFPVKVPYRKITINPGCVVVDGMPPGVSFKAPSYLEISSMRRILDSAEFI 936
Query: 177 TFTVTRPFQGLIRKPDEDDTNRLGEVILQEQVK 209
FTV RPF GL+ D + ++QE +
Sbjct: 937 KFTVIRPFPGLVINNQLVDQSESEGPVIQESAE 969
Score = 111 bits (278), Expect = 6e-25
Identities = 68/184 (36%), Positives = 97/184 (52%), Gaps = 37/184 (20%)
Query: 2 HPEELFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRPKLLTEGVKEPIVDSQG 61
HP +L+V GLPE I R P+ +GI +L KI++ N I+FVIKRP+LLT E
Sbjct: 498 HPNDLYVEGLPENIPFRSPSWYGIPRLEKIIQVGNRIKFVIKRPELLTHSTTE------- 550
Query: 62 TASSLGFSPPALPPERDSRDPLVGESLKRQGFQENYDARLLRIDIANTLREQVQELFNKT 121
V + +E+++ R+ + LR+QV+E+FN
Sbjct: 551 ----------------------VTQPRTNTPVKEDWNVRITK------LRKQVEEIFNLK 582
Query: 122 YGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKP--FGSQNLERILAMANKITFT 179
+ +ALG+ V+VPY +SNP + +E LP GI FR P FG LERI+ +NKI F
Sbjct: 583 FAQALGLTEAVKVPYPVFESNPEFLYVEGLPEGIPFRSPTWFGIPRLERIVRGSNKIKFV 642
Query: 180 VTRP 183
V +P
Sbjct: 643 VKKP 646
Score = 107 bits (268), Expect = 8e-24
Identities = 78/235 (33%), Positives = 116/235 (49%), Gaps = 48/235 (20%)
Query: 2 HPEELFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRPKLLTEGVKEPIVDSQG 61
H E+L+V GLPEGI RRP+ +GI +L +IL A I+FVIK+ +LL
Sbjct: 393 HVEDLYVEGLPEGIPFRRPSTYGIPRLERILLAKERIRFVIKKHELL-----------NS 441
Query: 62 TASSLGFSPPALPPERDSRDPLVGESLKRQGFQENYDARLLRIDIANTLREQVQELFNKT 121
T L PA G +E + AR+ + LR+ V +LF K
Sbjct: 442 TREDLQLDKPA------------------SGVKEEWYARITK------LRKMVDQLFCKK 477
Query: 122 YGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKP--FGSQNLERILAMANKITFT 179
+ EALG VPY+ +++P + +E LP I FR P +G LE+I+ + N+I F
Sbjct: 478 FAEALGSTEAKAVPYQKFEAHPNDLYVEGLPENIPFRSPSWYGIPRLEKIIQVGNRIKFV 537
Query: 180 VTRP----------FQGLIRKPDEDDTNRLGEVILQEQVKELFNEKYSQCLWLLQ 224
+ RP Q P ++D N + L++QV+E+FN K++Q L L +
Sbjct: 538 IKRPELLTHSTTEVTQPRTNTPVKEDWN-VRITKLRKQVEEIFNLKFAQALGLTE 591
Score = 101 bits (251), Expect = 8e-22
Identities = 82/286 (28%), Positives = 133/286 (46%), Gaps = 71/286 (24%)
Query: 2 HPEELFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRPKLLTEGVKEPIVDSQG 61
+PE L+V GLPEGI R P FGI +L +I+ SN I+FV+K+P+L+ + P + S+
Sbjct: 603 NPEFLYVEGLPEGIPFRSPTWFGIPRLERIVRGSNKIKFVVKKPELVISYLP-PGMASKI 661
Query: 62 TASSLGFSPPALPPERDSRDPLVGESL--------------------------KRQGFQE 95
+L P +S+ P + ++ K +G +
Sbjct: 662 NTKALQSPKRPRSPGSNSKVPEIEVTVEGPNNNNPQTSAVRTPTQTNGSNVPFKPRGREF 721
Query: 96 NYDARLLRIDIANTLREQVQELFNKTYGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGI 155
+++A +I L+++V+ LFN+ GEALG+K V+VP+ +S P +E LP G+
Sbjct: 722 SFEAWNAKI---TDLKQKVENLFNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGV 778
Query: 156 LFRKP--FGSQNLERILAMANKITFTVTRP--FQGLIRKP-------------------- 191
FR+P FG LE+IL KI F + +P F+ I++
Sbjct: 779 PFRRPSTFGIPRLEKILRNKAKIKFIIKKPEMFETAIKESTSSKSPPRKINSSPNVNTTA 838
Query: 192 -------------DEDDTNRLGEV----ILQEQVKELFNEKYSQCL 220
+DD RL +V L+EQV +LF+ K+ + +
Sbjct: 839 SGVEDLNIIQVTIPDDDNERLSKVEKARQLREQVNDLFSRKFGEAI 884
Score = 65.1 bits (157), Expect = 6e-11
Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 22/170 (12%)
Query: 68 FSPPALPPERDSRD----PLVGESLKRQGFQENYDARLLRIDIANTLREQVQELFNKTYG 123
+SPP+ P+ + P + KR+ + N++ RI LR+QV+ELF + Y
Sbjct: 318 YSPPSKRPKANELPQPPVPEPANAGKRKVREFNFEKWNARI---TDLRKQVEELFERKYA 374
Query: 124 EALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKP--FGSQNLERILAMANKITFTVT 181
+A+ K PV +PY +S+ + +E LP GI FR+P +G LERIL +I F +
Sbjct: 375 QAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLERILLAKERIRFVIK 434
Query: 182 RPFQGLIRKPDED---DTNRLGE--------VILQEQVKELFNEKYSQCL 220
+ L+ ED D G L++ V +LF +K+++ L
Sbjct: 435 K--HELLNSTREDLQLDKPASGVKEEWYARITKLRKMVDQLFCKKFAEAL 482
Score = 49.3 bits (116), Expect = 3e-06
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 109 TLREQVQELFNKTYGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKP--FGSQNL 166
TLR+ V++ F YG+ALG V VPY+ + + +++++ LP G+ F+ P + L
Sbjct: 111 TLRKTVEDYFCFCYGKALGKSTVVPVPYEKMLRDQSAVVVQGLPEGVAFKHPENYDLATL 170
Query: 167 ERILAMANKITFTVTRPF 184
+ IL I+F + RPF
Sbjct: 171 KWILENKAGISFIIKRPF 188
Score = 38.9 bits (89), Expect = 0.005
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 8 VVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRPKL 47
V GLPEG++ + P + +A L ILE I F+IKRP L
Sbjct: 150 VQGLPEGVAFKHPENYDLATLKWILENKAGISFIIKRPFL 189
Score = 33.5 bits (75), Expect = 0.20
Identities = 14/45 (31%), Positives = 29/45 (64%)
Query: 1 MHPEELFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRP 45
++P + V G+P G+S + P+ I+ + +IL+++ I+F + RP
Sbjct: 899 INPGCVVVDGMPPGVSFKAPSYLEISSMRRILDSAEFIKFTVIRP 943
>gi|169881252 general transcription factor II, i isoform 4 [Homo
sapiens]
Length = 957
Score = 131 bits (330), Expect = 5e-31
Identities = 74/213 (34%), Positives = 121/213 (56%), Gaps = 15/213 (7%)
Query: 3 PEELFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRPKLLTEGVKEPIVDSQGT 62
PE+ +V GLPEG+ RRP+ FGI +L KIL I+F+IK+P++ +KE
Sbjct: 725 PEDFYVEGLPEGVPFRRPSTFGIPRLEKILRNKAKIKFIIKKPEMFETAIKE-------- 776
Query: 63 ASSLGFSPP----ALPPERDSRDPLVGESLKRQGFQENYDARLLRIDIANTLREQVQELF 118
S+ SPP + P + + ++ + ++ + RL +++ A LREQV +LF
Sbjct: 777 -STSSKSPPRKINSSPNVNTTASGVEDLNIIQVTIPDDDNERLSKVEKARQLREQVNDLF 835
Query: 119 NKTYGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKP--FGSQNLERILAMANKI 176
++ +GEA+G+ +PV+VPY+ I NPG ++++ +PPG+ F+ P ++ RIL A I
Sbjct: 836 SRKFGEAIGMGFPVKVPYRKITINPGCVVVDGMPPGVSFKAPSYLEISSMRRILDSAEFI 895
Query: 177 TFTVTRPFQGLIRKPDEDDTNRLGEVILQEQVK 209
FTV RPF GL+ D + ++QE +
Sbjct: 896 KFTVIRPFPGLVINNQLVDQSESEGPVIQESAE 928
Score = 111 bits (278), Expect = 6e-25
Identities = 68/184 (36%), Positives = 97/184 (52%), Gaps = 37/184 (20%)
Query: 2 HPEELFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRPKLLTEGVKEPIVDSQG 61
HP +L+V GLPE I R P+ +GI +L KI++ N I+FVIKRP+LLT E
Sbjct: 457 HPNDLYVEGLPENIPFRSPSWYGIPRLEKIIQVGNRIKFVIKRPELLTHSTTE------- 509
Query: 62 TASSLGFSPPALPPERDSRDPLVGESLKRQGFQENYDARLLRIDIANTLREQVQELFNKT 121
V + +E+++ R+ + LR+QV+E+FN
Sbjct: 510 ----------------------VTQPRTNTPVKEDWNVRITK------LRKQVEEIFNLK 541
Query: 122 YGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKP--FGSQNLERILAMANKITFT 179
+ +ALG+ V+VPY +SNP + +E LP GI FR P FG LERI+ +NKI F
Sbjct: 542 FAQALGLTEAVKVPYPVFESNPEFLYVEGLPEGIPFRSPTWFGIPRLERIVRGSNKIKFV 601
Query: 180 VTRP 183
V +P
Sbjct: 602 VKKP 605
Score = 107 bits (268), Expect = 8e-24
Identities = 78/235 (33%), Positives = 116/235 (49%), Gaps = 48/235 (20%)
Query: 2 HPEELFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRPKLLTEGVKEPIVDSQG 61
H E+L+V GLPEGI RRP+ +GI +L +IL A I+FVIK+ +LL
Sbjct: 352 HVEDLYVEGLPEGIPFRRPSTYGIPRLERILLAKERIRFVIKKHELL-----------NS 400
Query: 62 TASSLGFSPPALPPERDSRDPLVGESLKRQGFQENYDARLLRIDIANTLREQVQELFNKT 121
T L PA G +E + AR+ + LR+ V +LF K
Sbjct: 401 TREDLQLDKPA------------------SGVKEEWYARITK------LRKMVDQLFCKK 436
Query: 122 YGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKP--FGSQNLERILAMANKITFT 179
+ EALG VPY+ +++P + +E LP I FR P +G LE+I+ + N+I F
Sbjct: 437 FAEALGSTEAKAVPYQKFEAHPNDLYVEGLPENIPFRSPSWYGIPRLEKIIQVGNRIKFV 496
Query: 180 VTRP----------FQGLIRKPDEDDTNRLGEVILQEQVKELFNEKYSQCLWLLQ 224
+ RP Q P ++D N + L++QV+E+FN K++Q L L +
Sbjct: 497 IKRPELLTHSTTEVTQPRTNTPVKEDWN-VRITKLRKQVEEIFNLKFAQALGLTE 550
Score = 101 bits (251), Expect = 8e-22
Identities = 82/286 (28%), Positives = 133/286 (46%), Gaps = 71/286 (24%)
Query: 2 HPEELFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRPKLLTEGVKEPIVDSQG 61
+PE L+V GLPEGI R P FGI +L +I+ SN I+FV+K+P+L+ + P + S+
Sbjct: 562 NPEFLYVEGLPEGIPFRSPTWFGIPRLERIVRGSNKIKFVVKKPELVISYLP-PGMASKI 620
Query: 62 TASSLGFSPPALPPERDSRDPLVGESL--------------------------KRQGFQE 95
+L P +S+ P + ++ K +G +
Sbjct: 621 NTKALQSPKRPRSPGSNSKVPEIEVTVEGPNNNNPQTSAVRTPTQTNGSNVPFKPRGREF 680
Query: 96 NYDARLLRIDIANTLREQVQELFNKTYGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGI 155
+++A +I L+++V+ LFN+ GEALG+K V+VP+ +S P +E LP G+
Sbjct: 681 SFEAWNAKI---TDLKQKVENLFNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGV 737
Query: 156 LFRKP--FGSQNLERILAMANKITFTVTRP--FQGLIRKP-------------------- 191
FR+P FG LE+IL KI F + +P F+ I++
Sbjct: 738 PFRRPSTFGIPRLEKILRNKAKIKFIIKKPEMFETAIKESTSSKSPPRKINSSPNVNTTA 797
Query: 192 -------------DEDDTNRLGEV----ILQEQVKELFNEKYSQCL 220
+DD RL +V L+EQV +LF+ K+ + +
Sbjct: 798 SGVEDLNIIQVTIPDDDNERLSKVEKARQLREQVNDLFSRKFGEAI 843
Score = 65.1 bits (157), Expect = 6e-11
Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 22/170 (12%)
Query: 68 FSPPALPPERDSRD----PLVGESLKRQGFQENYDARLLRIDIANTLREQVQELFNKTYG 123
+SPP+ P+ + P + KR+ + N++ RI LR+QV+ELF + Y
Sbjct: 277 YSPPSKRPKANELPQPPVPEPANAGKRKVREFNFEKWNARI---TDLRKQVEELFERKYA 333
Query: 124 EALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKP--FGSQNLERILAMANKITFTVT 181
+A+ K PV +PY +S+ + +E LP GI FR+P +G LERIL +I F +
Sbjct: 334 QAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLERILLAKERIRFVIK 393
Query: 182 RPFQGLIRKPDED---DTNRLGE--------VILQEQVKELFNEKYSQCL 220
+ L+ ED D G L++ V +LF +K+++ L
Sbjct: 394 K--HELLNSTREDLQLDKPASGVKEEWYARITKLRKMVDQLFCKKFAEAL 441
Score = 49.3 bits (116), Expect = 3e-06
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 109 TLREQVQELFNKTYGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKP--FGSQNL 166
TLR+ V++ F YG+ALG V VPY+ + + +++++ LP G+ F+ P + L
Sbjct: 111 TLRKTVEDYFCFCYGKALGKSTVVPVPYEKMLRDQSAVVVQGLPEGVAFKHPENYDLATL 170
Query: 167 ERILAMANKITFTVTRPF 184
+ IL I+F + RPF
Sbjct: 171 KWILENKAGISFIIKRPF 188
Score = 38.9 bits (89), Expect = 0.005
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 8 VVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRPKL 47
V GLPEG++ + P + +A L ILE I F+IKRP L
Sbjct: 150 VQGLPEGVAFKHPENYDLATLKWILENKAGISFIIKRPFL 189
Score = 33.5 bits (75), Expect = 0.20
Identities = 14/45 (31%), Positives = 29/45 (64%)
Query: 1 MHPEELFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRP 45
++P + V G+P G+S + P+ I+ + +IL+++ I+F + RP
Sbjct: 858 INPGCVVVDGMPPGVSFKAPSYLEISSMRRILDSAEFIKFTVIRP 902
>gi|48762700 GTF2I repeat domain containing 2 [Homo sapiens]
Length = 949
Score = 87.8 bits (216), Expect = 9e-18
Identities = 48/134 (35%), Positives = 80/134 (59%), Gaps = 10/134 (7%)
Query: 95 ENYDARLLRIDIANTLREQVQELFNKTYGEALGIKYPVQVPYKWIKSNPGSMIIEELPPG 154
+N RL I+ LREQV +LF++ +GEA+G+ +PV+VPY+ I NPG ++I+ +PPG
Sbjct: 317 DNEKERLSSIEKIKQLREQVNDLFSRKFGEAIGVDFPVKVPYRKITFNPGCVVIDGMPPG 376
Query: 155 ILFRKP--FGSQNLERILAMANKITFTVTRPFQGLIRKPDEDDTNRLGEVILQEQVKELF 212
++F+ P ++ RIL A I FTV RP GL + + +G+ + +Q +F
Sbjct: 377 VVFKAPGYLEISSMRRILEAAEFIKFTVIRPLPGL-------ELSNVGKRKI-DQEGRVF 428
Query: 213 NEKYSQCLWLLQQQ 226
EK+ + + ++ Q
Sbjct: 429 QEKWERAYFFVEVQ 442
Score = 49.7 bits (117), Expect = 3e-06
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 110 LREQVQELFNKTYGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKP--FGSQNLE 167
LR+ V++ F YG+ALG V VPY+ + + +++++ LP G+ F+ P + L+
Sbjct: 107 LRKAVEDYFCFCYGKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLK 166
Query: 168 RILAMANKITFTVTRPFQG 186
IL I+F + RPF G
Sbjct: 167 WILENKAGISFIINRPFLG 185
Score = 37.7 bits (86), Expect = 0.010
Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 9/99 (9%)
Query: 8 VVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRPKLLTE---GVKEPIVDSQ---- 60
V GLPEG++ + P + +A L ILE I F+I RP L E G + D++
Sbjct: 145 VQGLPEGVAFQHPENYDLATLKWILENKAGISFIINRPFLGPESQLGGPGMVTDAERSIV 204
Query: 61 GTASSLGFSPPALPPERDSRDPLVGE--SLKRQGFQENY 97
+ S G P DS L E S+K++ NY
Sbjct: 205 SPSESCGPINVKTEPMEDSGISLKAEAVSVKKESEDPNY 243
Score = 32.3 bits (72), Expect = 0.44
Identities = 14/44 (31%), Positives = 26/44 (59%)
Query: 2 HPEELFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRP 45
+P + + G+P G+ + P I+ + +ILEA+ I+F + RP
Sbjct: 364 NPGCVVIDGMPPGVVFKAPGYLEISSMRRILEAAEFIKFTVIRP 407
>gi|51241788 GTF2I repeat domain containing 2B [Homo sapiens]
Length = 949
Score = 87.8 bits (216), Expect = 9e-18
Identities = 48/134 (35%), Positives = 80/134 (59%), Gaps = 10/134 (7%)
Query: 95 ENYDARLLRIDIANTLREQVQELFNKTYGEALGIKYPVQVPYKWIKSNPGSMIIEELPPG 154
+N RL I+ LREQV +LF++ +GEA+G+ +PV+VPY+ I NPG ++I+ +PPG
Sbjct: 317 DNEKERLSSIEKIKQLREQVNDLFSRKFGEAIGVDFPVKVPYRKITFNPGCVVIDGMPPG 376
Query: 155 ILFRKP--FGSQNLERILAMANKITFTVTRPFQGLIRKPDEDDTNRLGEVILQEQVKELF 212
++F+ P ++ RIL A I FTV RP GL + + +G+ + +Q +F
Sbjct: 377 VVFKAPGYLEISSMRRILEAAEFIKFTVIRPLPGL-------ELSNVGKRKI-DQEGRVF 428
Query: 213 NEKYSQCLWLLQQQ 226
EK+ + + ++ Q
Sbjct: 429 QEKWERAYFFVEVQ 442
Score = 49.7 bits (117), Expect = 3e-06
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 110 LREQVQELFNKTYGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKP--FGSQNLE 167
LR+ V++ F YG+ALG V VPY+ + + +++++ LP G+ F+ P + L+
Sbjct: 107 LRKAVEDYFCFCYGKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLK 166
Query: 168 RILAMANKITFTVTRPFQG 186
IL I+F + RPF G
Sbjct: 167 WILENKAGISFIINRPFLG 185
Score = 37.7 bits (86), Expect = 0.010
Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 9/99 (9%)
Query: 8 VVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRPKLLTE---GVKEPIVDSQ---- 60
V GLPEG++ + P + +A L ILE I F+I RP L E G + D++
Sbjct: 145 VQGLPEGVAFQHPENYDLATLKWILENKAGISFIINRPFLGPESQLGGPGMVTDAERSIV 204
Query: 61 GTASSLGFSPPALPPERDSRDPLVGE--SLKRQGFQENY 97
+ S G P DS L E S+K++ NY
Sbjct: 205 SPSESCGPINVKTEPMEDSGISLKAEAVSVKKESEDPNY 243
Score = 32.3 bits (72), Expect = 0.44
Identities = 14/44 (31%), Positives = 26/44 (59%)
Query: 2 HPEELFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRP 45
+P + + G+P G+ + P I+ + +ILEA+ I+F + RP
Sbjct: 364 NPGCVVIDGMPPGVVFKAPGYLEISSMRRILEAAEFIKFTVIRP 407
>gi|239752592 PREDICTED: hypothetical protein XP_002348308,
partial [Homo sapiens]
Length = 94
Score = 37.7 bits (86), Expect = 0.010
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 6 LFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKR 44
L V GLPEG++ + P + +A L ILE + I F+IKR
Sbjct: 56 LIVQGLPEGVAFKHPENYDLATLEWILEYTAGISFIIKR 94
Score = 34.7 bits (78), Expect = 0.088
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 108 NTLREQVQELFNKTYGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKP--FGSQN 165
NT ++ V++ F + L V VPY+ + + ++I++ LP G+ F+ P +
Sbjct: 18 NTRKKTVEDYFCFCCLKTLQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLAT 77
Query: 166 LERILAMANKITFTVTR 182
LE IL I+F + R
Sbjct: 78 LEWILEYTAGISFIIKR 94
>gi|239746033 PREDICTED: hypothetical protein XP_002344174 [Homo
sapiens]
Length = 145
Score = 37.7 bits (86), Expect = 0.010
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 6 LFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKR 44
L V GLPEG++ + P + +A L ILE + I F+IKR
Sbjct: 107 LIVQGLPEGVAFKHPENYDLATLEWILEYTAGISFIIKR 145
Score = 37.0 bits (84), Expect = 0.018
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 108 NTLREQVQELFNKTYGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKP--FGSQN 165
NT ++ V++ F +AL V VPY+ + + ++I++ LP G+ F+ P +
Sbjct: 69 NTRKKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLAT 128
Query: 166 LERILAMANKITFTVTR 182
LE IL I+F + R
Sbjct: 129 LEWILEYTAGISFIIKR 145
>gi|239757552 PREDICTED: similar to hCG2006635, partial [Homo
sapiens]
Length = 304
Score = 35.8 bits (81), Expect = 0.040
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 6 LFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIK 43
L V GLPEG++ + P + +A L ILE + I F+IK
Sbjct: 56 LIVQGLPEGVAFKHPENYDLATLEWILEYTAGISFIIK 93
Score = 35.4 bits (80), Expect = 0.052
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 108 NTLREQVQELFNKTYGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKP--FGSQN 165
NT ++ V++ F +AL V VPY+ + + ++I++ LP G+ F+ P +
Sbjct: 18 NTRKKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLAT 77
Query: 166 LERILAMANKITFTV 180
LE IL I+F +
Sbjct: 78 LEWILEYTAGISFII 92
>gi|122937289 kinesin family member 18B [Homo sapiens]
Length = 855
Score = 31.2 bits (69), Expect = 0.98
Identities = 13/26 (50%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Query: 230 ISEGRPFA-EICNDAKVPGYTEPFTR 254
++ G P A E+C+++K PGYT P TR
Sbjct: 572 LARGAPLAQELCSESKPPGYTGPVTR 597
>gi|24497618 ATPase family, AAA domain containing 2 [Homo sapiens]
Length = 1390
Score = 30.0 bits (66), Expect = 2.2
Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Query: 47 LLTEGVKEPIVDSQGTASSLGFSPPALPPERDSRDPLVGESLKRQGFQENYDARLLRIDI 106
+L + K PI + +L P A PPE S L E +KR QE R LRI +
Sbjct: 937 ILKQAAKPPISKKKAVLQALEVLPVAPPPEPRS---LTAEEVKRLEEQEEDTFRELRIFL 993
Query: 107 AN 108
N
Sbjct: 994 RN 995
>gi|34577118 dopey family member 1 [Homo sapiens]
Length = 2465
Score = 28.9 bits (63), Expect = 4.8
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
Query: 182 RPFQGLIRKPDEDDTNRLGEVILQEQVKELFNEKYSQC 219
+PF+ LI D+ + LG VIL++ + E+F YSQC
Sbjct: 352 KPFRILISLLDKPE---LGPVILEDVLIEVFRTLYSQC 386
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.138 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,281,844
Number of Sequences: 37866
Number of extensions: 500544
Number of successful extensions: 1448
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1318
Number of HSP's gapped (non-prelim): 86
length of query: 265
length of database: 18,247,518
effective HSP length: 100
effective length of query: 165
effective length of database: 14,460,918
effective search space: 2386051470
effective search space used: 2386051470
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.