Guide to the Human Genome
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Name: POFUT2 Sequence: fasta or formatted (429aa) NCBI GI: 34147487
Description:

protein O-fucosyltransferase 2 isoform C

Referenced in:

Protein Glycosylation

Other entries for this name:
alt prot [424aa] protein O-fucosyltransferase 2 isoform A
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         25           2
 C cysteine            1.2          5           1
 D aspartate           5.8         25           2
 E glutamate           8.2         35           2
 F phenylalanine       4.7         20           2
 G glycine             6.5         28           2
 H histidine           3.0         13           1
 I isoleucine          4.9         21           2
 K lysine              4.9         21           2
 L leucine            10.3         44           3
 M methionine          1.6          7           1
 N asparagine          2.1          9           1
 P proline             4.9         21           2
 Q glutamine           3.5         15           1
 R arginine            7.7         33           3
 S serine              6.8         29           1
 T threonine           4.0         17           2
 V valine              6.3         27           1
 W tryptophan          3.7         16           1
 Y tyrosine            4.2         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein O-fucosyltransferase 2 isoform C 
POFUT2                0.878   protein O-fucosyltransferase 2 isoform A 
POFUT1                0.014   protein O-fucosyltransferase 1 isoform 1 precursor [...
ITGB1                 0.009   integrin beta 1 isoform 1C-1 precursor 
ITGB1                 0.009   integrin beta 1 isoform 1B precursor 
ITGB1                 0.009   integrin beta 1 isoform 1A precursor 
ITGB1                 0.009   integrin beta 1 isoform 1A precursor 
ITGB1                 0.009   integrin beta 1 isoform 1C-2 precursor 
ITGB1                 0.009   integrin beta 1 isoform 1D precursor 
SPG11                 0.008   spatacsin isoform 2 
SPG11                 0.008   spatacsin isoform 1 
MGAM                  0.005   maltase-glucoamylase 
LOC100129478          0.005   PREDICTED: hypothetical protein 
LOC100129478          0.005   PREDICTED: hypothetical protein 
LOC100129478          0.005   PREDICTED: hypothetical protein 
DHX37                 0.005   DEAH (Asp-Glu-Ala-His) box polypeptide 37 
NLRP13                0.005   NACHT, leucine rich repeat and PYD containing 13 [H...
CCDC22                0.005   coiled-coil domain containing 22 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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