Guide to the Human Genome
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Search of human proteins with 23238254

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|23238254 carnitine palmitoyltransferase 1B isoform a [Homo
sapiens]
         (772 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|223468672 carnitine palmitoyltransferase 1B isoform a [Homo s...  1578   0.0  
gi|23238254 carnitine palmitoyltransferase 1B isoform a [Homo sa...  1578   0.0  
gi|223468678 carnitine palmitoyltransferase 1B isoform a [Homo s...  1578   0.0  
gi|4758050 carnitine palmitoyltransferase 1B isoform a [Homo sap...  1578   0.0  
gi|23238256 carnitine palmitoyltransferase 1B isoform a [Homo sa...  1578   0.0  
gi|223468670 carnitine palmitoyltransferase 1B isoform c [Homo s...  1494   0.0  
gi|73623030 carnitine palmitoyltransferase 1A liver isoform 1 [H...  1031   0.0  
gi|73623028 carnitine palmitoyltransferase 1A liver isoform 2 [H...  1009   0.0  
gi|22748777 carnitine palmitoyltransferase 1C isoform 2 [Homo sa...   826   0.0  
gi|209862905 carnitine palmitoyltransferase 1C isoform 1 [Homo s...   811   0.0  
gi|223468674 carnitine palmitoyltransferase 1B isoform d [Homo s...   729   0.0  
gi|21618331 carnitine acetyltransferase precursor [Homo sapiens]      279   8e-75
gi|188595668 choline acetyltransferase isoform 1 [Homo sapiens]       246   6e-65
gi|218931226 choline acetyltransferase isoform 1 [Homo sapiens]       246   6e-65
gi|218931224 choline acetyltransferase isoform 3 [Homo sapiens]       246   6e-65
gi|218931221 choline acetyltransferase isoform 1 [Homo sapiens]       246   6e-65
gi|188595684 choline acetyltransferase isoform 1 [Homo sapiens]       246   6e-65
gi|188595672 choline acetyltransferase isoform 1 [Homo sapiens]       246   6e-65
gi|188595670 choline acetyltransferase isoform 2 [Homo sapiens]       246   6e-65
gi|4503023 carnitine O-palmitoyltransferase precursor [Homo sapi...   227   3e-59
gi|31542325 peroxisomal carnitine O-octanoyltransferase isoform ...   226   6e-59
gi|221316602 peroxisomal carnitine O-octanoyltransferase isoform...   211   2e-54
gi|47131207 solute carrier family 26, member 1 isoform a [Homo s...    31   3.8  
gi|20336272 solute carrier family 26, member 1 isoform a [Homo s...    31   3.8  
gi|110618248 mucin and cadherin-like isoform 1 [Homo sapiens]          31   3.8  

>gi|223468672 carnitine palmitoyltransferase 1B isoform a [Homo
           sapiens]
          Length = 772

 Score = 1578 bits (4087), Expect = 0.0
 Identities = 772/772 (100%), Positives = 772/772 (100%)

Query: 1   MAEAHQAVAFQFTVTPDGVDFRLSREALKHVYLSGINSWKKRLIRIKNGILRGVYPGSPT 60
           MAEAHQAVAFQFTVTPDGVDFRLSREALKHVYLSGINSWKKRLIRIKNGILRGVYPGSPT
Sbjct: 1   MAEAHQAVAFQFTVTPDGVDFRLSREALKHVYLSGINSWKKRLIRIKNGILRGVYPGSPT 60

Query: 61  SWLVVIMATVGSSFCNVDISLGLVSCIQRCLPQGCGPYQTPQTRALLSMAIFSTGVWVTG 120
           SWLVVIMATVGSSFCNVDISLGLVSCIQRCLPQGCGPYQTPQTRALLSMAIFSTGVWVTG
Sbjct: 61  SWLVVIMATVGSSFCNVDISLGLVSCIQRCLPQGCGPYQTPQTRALLSMAIFSTGVWVTG 120

Query: 121 IFFFRQTLKLLLCYHGWMFEMHGKTSNLTRIWAMCIRLLSSRHPMLYSFQTSLPKLPVPR 180
           IFFFRQTLKLLLCYHGWMFEMHGKTSNLTRIWAMCIRLLSSRHPMLYSFQTSLPKLPVPR
Sbjct: 121 IFFFRQTLKLLLCYHGWMFEMHGKTSNLTRIWAMCIRLLSSRHPMLYSFQTSLPKLPVPR 180

Query: 181 VSATIQRYLESVRPLLDDEEYYRMELLAKEFQDKTAPRLQKYLVLKSWWASNYVSDWWEE 240
           VSATIQRYLESVRPLLDDEEYYRMELLAKEFQDKTAPRLQKYLVLKSWWASNYVSDWWEE
Sbjct: 181 VSATIQRYLESVRPLLDDEEYYRMELLAKEFQDKTAPRLQKYLVLKSWWASNYVSDWWEE 240

Query: 241 YIYLRGRSPLMVNSNYYVMDLVLIKNTDVQAARLGNIIHAMIMYRRKLDREEIKPVMALG 300
           YIYLRGRSPLMVNSNYYVMDLVLIKNTDVQAARLGNIIHAMIMYRRKLDREEIKPVMALG
Sbjct: 241 YIYLRGRSPLMVNSNYYVMDLVLIKNTDVQAARLGNIIHAMIMYRRKLDREEIKPVMALG 300

Query: 301 IVPMCSYQMERMFNTTRIPGKDTDVLQHLSDSRHVAVYHKGRFFKLWLYEGARLLKPQDL 360
           IVPMCSYQMERMFNTTRIPGKDTDVLQHLSDSRHVAVYHKGRFFKLWLYEGARLLKPQDL
Sbjct: 301 IVPMCSYQMERMFNTTRIPGKDTDVLQHLSDSRHVAVYHKGRFFKLWLYEGARLLKPQDL 360

Query: 361 EMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQARQAFFSSGKNKAALEAIERAAFFVA 420
           EMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQARQAFFSSGKNKAALEAIERAAFFVA
Sbjct: 361 EMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQARQAFFSSGKNKAALEAIERAAFFVA 420

Query: 421 LDEESYSYDPEDEASLSLYGKALLHGNCYNRWFDKSFTLISFKNGQLGLNAEHAWADAPI 480
           LDEESYSYDPEDEASLSLYGKALLHGNCYNRWFDKSFTLISFKNGQLGLNAEHAWADAPI
Sbjct: 421 LDEESYSYDPEDEASLSLYGKALLHGNCYNRWFDKSFTLISFKNGQLGLNAEHAWADAPI 480

Query: 481 IGHLWEFVLGTDSFHLGYTETGHCLGKPNPALAPPTRLQWDIPKQCQAVIESSYQVAKAL 540
           IGHLWEFVLGTDSFHLGYTETGHCLGKPNPALAPPTRLQWDIPKQCQAVIESSYQVAKAL
Sbjct: 481 IGHLWEFVLGTDSFHLGYTETGHCLGKPNPALAPPTRLQWDIPKQCQAVIESSYQVAKAL 540

Query: 541 ADDVELYCFQFLPFGKGLIKKCRTSPDAFVQIALQLAHFRDRGKFCLTYEASMTRMFREG 600
           ADDVELYCFQFLPFGKGLIKKCRTSPDAFVQIALQLAHFRDRGKFCLTYEASMTRMFREG
Sbjct: 541 ADDVELYCFQFLPFGKGLIKKCRTSPDAFVQIALQLAHFRDRGKFCLTYEASMTRMFREG 600

Query: 601 RTETVRSCTSESTAFVQAMMEGSHTKADLRDLFQKAAKKHQNMYRLAMTGAGIDRHLFCL 660
           RTETVRSCTSESTAFVQAMMEGSHTKADLRDLFQKAAKKHQNMYRLAMTGAGIDRHLFCL
Sbjct: 601 RTETVRSCTSESTAFVQAMMEGSHTKADLRDLFQKAAKKHQNMYRLAMTGAGIDRHLFCL 660

Query: 661 YLVSKYLGVSSPFLAEVLSEPWRLSTSQIPQSQIRMFDPEQHPNHLGAGGGFGPVADDGY 720
           YLVSKYLGVSSPFLAEVLSEPWRLSTSQIPQSQIRMFDPEQHPNHLGAGGGFGPVADDGY
Sbjct: 661 YLVSKYLGVSSPFLAEVLSEPWRLSTSQIPQSQIRMFDPEQHPNHLGAGGGFGPVADDGY 720

Query: 721 GVSYMIAGENTIFFHISSKFSSSETNAQRFGNHIRKALLDIADLFQVPKAYS 772
           GVSYMIAGENTIFFHISSKFSSSETNAQRFGNHIRKALLDIADLFQVPKAYS
Sbjct: 721 GVSYMIAGENTIFFHISSKFSSSETNAQRFGNHIRKALLDIADLFQVPKAYS 772


>gi|23238254 carnitine palmitoyltransferase 1B isoform a [Homo
           sapiens]
          Length = 772

 Score = 1578 bits (4087), Expect = 0.0
 Identities = 772/772 (100%), Positives = 772/772 (100%)

Query: 1   MAEAHQAVAFQFTVTPDGVDFRLSREALKHVYLSGINSWKKRLIRIKNGILRGVYPGSPT 60
           MAEAHQAVAFQFTVTPDGVDFRLSREALKHVYLSGINSWKKRLIRIKNGILRGVYPGSPT
Sbjct: 1   MAEAHQAVAFQFTVTPDGVDFRLSREALKHVYLSGINSWKKRLIRIKNGILRGVYPGSPT 60

Query: 61  SWLVVIMATVGSSFCNVDISLGLVSCIQRCLPQGCGPYQTPQTRALLSMAIFSTGVWVTG 120
           SWLVVIMATVGSSFCNVDISLGLVSCIQRCLPQGCGPYQTPQTRALLSMAIFSTGVWVTG
Sbjct: 61  SWLVVIMATVGSSFCNVDISLGLVSCIQRCLPQGCGPYQTPQTRALLSMAIFSTGVWVTG 120

Query: 121 IFFFRQTLKLLLCYHGWMFEMHGKTSNLTRIWAMCIRLLSSRHPMLYSFQTSLPKLPVPR 180
           IFFFRQTLKLLLCYHGWMFEMHGKTSNLTRIWAMCIRLLSSRHPMLYSFQTSLPKLPVPR
Sbjct: 121 IFFFRQTLKLLLCYHGWMFEMHGKTSNLTRIWAMCIRLLSSRHPMLYSFQTSLPKLPVPR 180

Query: 181 VSATIQRYLESVRPLLDDEEYYRMELLAKEFQDKTAPRLQKYLVLKSWWASNYVSDWWEE 240
           VSATIQRYLESVRPLLDDEEYYRMELLAKEFQDKTAPRLQKYLVLKSWWASNYVSDWWEE
Sbjct: 181 VSATIQRYLESVRPLLDDEEYYRMELLAKEFQDKTAPRLQKYLVLKSWWASNYVSDWWEE 240

Query: 241 YIYLRGRSPLMVNSNYYVMDLVLIKNTDVQAARLGNIIHAMIMYRRKLDREEIKPVMALG 300
           YIYLRGRSPLMVNSNYYVMDLVLIKNTDVQAARLGNIIHAMIMYRRKLDREEIKPVMALG
Sbjct: 241 YIYLRGRSPLMVNSNYYVMDLVLIKNTDVQAARLGNIIHAMIMYRRKLDREEIKPVMALG 300

Query: 301 IVPMCSYQMERMFNTTRIPGKDTDVLQHLSDSRHVAVYHKGRFFKLWLYEGARLLKPQDL 360
           IVPMCSYQMERMFNTTRIPGKDTDVLQHLSDSRHVAVYHKGRFFKLWLYEGARLLKPQDL
Sbjct: 301 IVPMCSYQMERMFNTTRIPGKDTDVLQHLSDSRHVAVYHKGRFFKLWLYEGARLLKPQDL 360

Query: 361 EMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQARQAFFSSGKNKAALEAIERAAFFVA 420
           EMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQARQAFFSSGKNKAALEAIERAAFFVA
Sbjct: 361 EMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQARQAFFSSGKNKAALEAIERAAFFVA 420

Query: 421 LDEESYSYDPEDEASLSLYGKALLHGNCYNRWFDKSFTLISFKNGQLGLNAEHAWADAPI 480
           LDEESYSYDPEDEASLSLYGKALLHGNCYNRWFDKSFTLISFKNGQLGLNAEHAWADAPI
Sbjct: 421 LDEESYSYDPEDEASLSLYGKALLHGNCYNRWFDKSFTLISFKNGQLGLNAEHAWADAPI 480

Query: 481 IGHLWEFVLGTDSFHLGYTETGHCLGKPNPALAPPTRLQWDIPKQCQAVIESSYQVAKAL 540
           IGHLWEFVLGTDSFHLGYTETGHCLGKPNPALAPPTRLQWDIPKQCQAVIESSYQVAKAL
Sbjct: 481 IGHLWEFVLGTDSFHLGYTETGHCLGKPNPALAPPTRLQWDIPKQCQAVIESSYQVAKAL 540

Query: 541 ADDVELYCFQFLPFGKGLIKKCRTSPDAFVQIALQLAHFRDRGKFCLTYEASMTRMFREG 600
           ADDVELYCFQFLPFGKGLIKKCRTSPDAFVQIALQLAHFRDRGKFCLTYEASMTRMFREG
Sbjct: 541 ADDVELYCFQFLPFGKGLIKKCRTSPDAFVQIALQLAHFRDRGKFCLTYEASMTRMFREG 600

Query: 601 RTETVRSCTSESTAFVQAMMEGSHTKADLRDLFQKAAKKHQNMYRLAMTGAGIDRHLFCL 660
           RTETVRSCTSESTAFVQAMMEGSHTKADLRDLFQKAAKKHQNMYRLAMTGAGIDRHLFCL
Sbjct: 601 RTETVRSCTSESTAFVQAMMEGSHTKADLRDLFQKAAKKHQNMYRLAMTGAGIDRHLFCL 660

Query: 661 YLVSKYLGVSSPFLAEVLSEPWRLSTSQIPQSQIRMFDPEQHPNHLGAGGGFGPVADDGY 720
           YLVSKYLGVSSPFLAEVLSEPWRLSTSQIPQSQIRMFDPEQHPNHLGAGGGFGPVADDGY
Sbjct: 661 YLVSKYLGVSSPFLAEVLSEPWRLSTSQIPQSQIRMFDPEQHPNHLGAGGGFGPVADDGY 720

Query: 721 GVSYMIAGENTIFFHISSKFSSSETNAQRFGNHIRKALLDIADLFQVPKAYS 772
           GVSYMIAGENTIFFHISSKFSSSETNAQRFGNHIRKALLDIADLFQVPKAYS
Sbjct: 721 GVSYMIAGENTIFFHISSKFSSSETNAQRFGNHIRKALLDIADLFQVPKAYS 772


>gi|223468678 carnitine palmitoyltransferase 1B isoform a [Homo
           sapiens]
          Length = 772

 Score = 1578 bits (4087), Expect = 0.0
 Identities = 772/772 (100%), Positives = 772/772 (100%)

Query: 1   MAEAHQAVAFQFTVTPDGVDFRLSREALKHVYLSGINSWKKRLIRIKNGILRGVYPGSPT 60
           MAEAHQAVAFQFTVTPDGVDFRLSREALKHVYLSGINSWKKRLIRIKNGILRGVYPGSPT
Sbjct: 1   MAEAHQAVAFQFTVTPDGVDFRLSREALKHVYLSGINSWKKRLIRIKNGILRGVYPGSPT 60

Query: 61  SWLVVIMATVGSSFCNVDISLGLVSCIQRCLPQGCGPYQTPQTRALLSMAIFSTGVWVTG 120
           SWLVVIMATVGSSFCNVDISLGLVSCIQRCLPQGCGPYQTPQTRALLSMAIFSTGVWVTG
Sbjct: 61  SWLVVIMATVGSSFCNVDISLGLVSCIQRCLPQGCGPYQTPQTRALLSMAIFSTGVWVTG 120

Query: 121 IFFFRQTLKLLLCYHGWMFEMHGKTSNLTRIWAMCIRLLSSRHPMLYSFQTSLPKLPVPR 180
           IFFFRQTLKLLLCYHGWMFEMHGKTSNLTRIWAMCIRLLSSRHPMLYSFQTSLPKLPVPR
Sbjct: 121 IFFFRQTLKLLLCYHGWMFEMHGKTSNLTRIWAMCIRLLSSRHPMLYSFQTSLPKLPVPR 180

Query: 181 VSATIQRYLESVRPLLDDEEYYRMELLAKEFQDKTAPRLQKYLVLKSWWASNYVSDWWEE 240
           VSATIQRYLESVRPLLDDEEYYRMELLAKEFQDKTAPRLQKYLVLKSWWASNYVSDWWEE
Sbjct: 181 VSATIQRYLESVRPLLDDEEYYRMELLAKEFQDKTAPRLQKYLVLKSWWASNYVSDWWEE 240

Query: 241 YIYLRGRSPLMVNSNYYVMDLVLIKNTDVQAARLGNIIHAMIMYRRKLDREEIKPVMALG 300
           YIYLRGRSPLMVNSNYYVMDLVLIKNTDVQAARLGNIIHAMIMYRRKLDREEIKPVMALG
Sbjct: 241 YIYLRGRSPLMVNSNYYVMDLVLIKNTDVQAARLGNIIHAMIMYRRKLDREEIKPVMALG 300

Query: 301 IVPMCSYQMERMFNTTRIPGKDTDVLQHLSDSRHVAVYHKGRFFKLWLYEGARLLKPQDL 360
           IVPMCSYQMERMFNTTRIPGKDTDVLQHLSDSRHVAVYHKGRFFKLWLYEGARLLKPQDL
Sbjct: 301 IVPMCSYQMERMFNTTRIPGKDTDVLQHLSDSRHVAVYHKGRFFKLWLYEGARLLKPQDL 360

Query: 361 EMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQARQAFFSSGKNKAALEAIERAAFFVA 420
           EMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQARQAFFSSGKNKAALEAIERAAFFVA
Sbjct: 361 EMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQARQAFFSSGKNKAALEAIERAAFFVA 420

Query: 421 LDEESYSYDPEDEASLSLYGKALLHGNCYNRWFDKSFTLISFKNGQLGLNAEHAWADAPI 480
           LDEESYSYDPEDEASLSLYGKALLHGNCYNRWFDKSFTLISFKNGQLGLNAEHAWADAPI
Sbjct: 421 LDEESYSYDPEDEASLSLYGKALLHGNCYNRWFDKSFTLISFKNGQLGLNAEHAWADAPI 480

Query: 481 IGHLWEFVLGTDSFHLGYTETGHCLGKPNPALAPPTRLQWDIPKQCQAVIESSYQVAKAL 540
           IGHLWEFVLGTDSFHLGYTETGHCLGKPNPALAPPTRLQWDIPKQCQAVIESSYQVAKAL
Sbjct: 481 IGHLWEFVLGTDSFHLGYTETGHCLGKPNPALAPPTRLQWDIPKQCQAVIESSYQVAKAL 540

Query: 541 ADDVELYCFQFLPFGKGLIKKCRTSPDAFVQIALQLAHFRDRGKFCLTYEASMTRMFREG 600
           ADDVELYCFQFLPFGKGLIKKCRTSPDAFVQIALQLAHFRDRGKFCLTYEASMTRMFREG
Sbjct: 541 ADDVELYCFQFLPFGKGLIKKCRTSPDAFVQIALQLAHFRDRGKFCLTYEASMTRMFREG 600

Query: 601 RTETVRSCTSESTAFVQAMMEGSHTKADLRDLFQKAAKKHQNMYRLAMTGAGIDRHLFCL 660
           RTETVRSCTSESTAFVQAMMEGSHTKADLRDLFQKAAKKHQNMYRLAMTGAGIDRHLFCL
Sbjct: 601 RTETVRSCTSESTAFVQAMMEGSHTKADLRDLFQKAAKKHQNMYRLAMTGAGIDRHLFCL 660

Query: 661 YLVSKYLGVSSPFLAEVLSEPWRLSTSQIPQSQIRMFDPEQHPNHLGAGGGFGPVADDGY 720
           YLVSKYLGVSSPFLAEVLSEPWRLSTSQIPQSQIRMFDPEQHPNHLGAGGGFGPVADDGY
Sbjct: 661 YLVSKYLGVSSPFLAEVLSEPWRLSTSQIPQSQIRMFDPEQHPNHLGAGGGFGPVADDGY 720

Query: 721 GVSYMIAGENTIFFHISSKFSSSETNAQRFGNHIRKALLDIADLFQVPKAYS 772
           GVSYMIAGENTIFFHISSKFSSSETNAQRFGNHIRKALLDIADLFQVPKAYS
Sbjct: 721 GVSYMIAGENTIFFHISSKFSSSETNAQRFGNHIRKALLDIADLFQVPKAYS 772


>gi|4758050 carnitine palmitoyltransferase 1B isoform a [Homo
           sapiens]
          Length = 772

 Score = 1578 bits (4087), Expect = 0.0
 Identities = 772/772 (100%), Positives = 772/772 (100%)

Query: 1   MAEAHQAVAFQFTVTPDGVDFRLSREALKHVYLSGINSWKKRLIRIKNGILRGVYPGSPT 60
           MAEAHQAVAFQFTVTPDGVDFRLSREALKHVYLSGINSWKKRLIRIKNGILRGVYPGSPT
Sbjct: 1   MAEAHQAVAFQFTVTPDGVDFRLSREALKHVYLSGINSWKKRLIRIKNGILRGVYPGSPT 60

Query: 61  SWLVVIMATVGSSFCNVDISLGLVSCIQRCLPQGCGPYQTPQTRALLSMAIFSTGVWVTG 120
           SWLVVIMATVGSSFCNVDISLGLVSCIQRCLPQGCGPYQTPQTRALLSMAIFSTGVWVTG
Sbjct: 61  SWLVVIMATVGSSFCNVDISLGLVSCIQRCLPQGCGPYQTPQTRALLSMAIFSTGVWVTG 120

Query: 121 IFFFRQTLKLLLCYHGWMFEMHGKTSNLTRIWAMCIRLLSSRHPMLYSFQTSLPKLPVPR 180
           IFFFRQTLKLLLCYHGWMFEMHGKTSNLTRIWAMCIRLLSSRHPMLYSFQTSLPKLPVPR
Sbjct: 121 IFFFRQTLKLLLCYHGWMFEMHGKTSNLTRIWAMCIRLLSSRHPMLYSFQTSLPKLPVPR 180

Query: 181 VSATIQRYLESVRPLLDDEEYYRMELLAKEFQDKTAPRLQKYLVLKSWWASNYVSDWWEE 240
           VSATIQRYLESVRPLLDDEEYYRMELLAKEFQDKTAPRLQKYLVLKSWWASNYVSDWWEE
Sbjct: 181 VSATIQRYLESVRPLLDDEEYYRMELLAKEFQDKTAPRLQKYLVLKSWWASNYVSDWWEE 240

Query: 241 YIYLRGRSPLMVNSNYYVMDLVLIKNTDVQAARLGNIIHAMIMYRRKLDREEIKPVMALG 300
           YIYLRGRSPLMVNSNYYVMDLVLIKNTDVQAARLGNIIHAMIMYRRKLDREEIKPVMALG
Sbjct: 241 YIYLRGRSPLMVNSNYYVMDLVLIKNTDVQAARLGNIIHAMIMYRRKLDREEIKPVMALG 300

Query: 301 IVPMCSYQMERMFNTTRIPGKDTDVLQHLSDSRHVAVYHKGRFFKLWLYEGARLLKPQDL 360
           IVPMCSYQMERMFNTTRIPGKDTDVLQHLSDSRHVAVYHKGRFFKLWLYEGARLLKPQDL
Sbjct: 301 IVPMCSYQMERMFNTTRIPGKDTDVLQHLSDSRHVAVYHKGRFFKLWLYEGARLLKPQDL 360

Query: 361 EMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQARQAFFSSGKNKAALEAIERAAFFVA 420
           EMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQARQAFFSSGKNKAALEAIERAAFFVA
Sbjct: 361 EMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQARQAFFSSGKNKAALEAIERAAFFVA 420

Query: 421 LDEESYSYDPEDEASLSLYGKALLHGNCYNRWFDKSFTLISFKNGQLGLNAEHAWADAPI 480
           LDEESYSYDPEDEASLSLYGKALLHGNCYNRWFDKSFTLISFKNGQLGLNAEHAWADAPI
Sbjct: 421 LDEESYSYDPEDEASLSLYGKALLHGNCYNRWFDKSFTLISFKNGQLGLNAEHAWADAPI 480

Query: 481 IGHLWEFVLGTDSFHLGYTETGHCLGKPNPALAPPTRLQWDIPKQCQAVIESSYQVAKAL 540
           IGHLWEFVLGTDSFHLGYTETGHCLGKPNPALAPPTRLQWDIPKQCQAVIESSYQVAKAL
Sbjct: 481 IGHLWEFVLGTDSFHLGYTETGHCLGKPNPALAPPTRLQWDIPKQCQAVIESSYQVAKAL 540

Query: 541 ADDVELYCFQFLPFGKGLIKKCRTSPDAFVQIALQLAHFRDRGKFCLTYEASMTRMFREG 600
           ADDVELYCFQFLPFGKGLIKKCRTSPDAFVQIALQLAHFRDRGKFCLTYEASMTRMFREG
Sbjct: 541 ADDVELYCFQFLPFGKGLIKKCRTSPDAFVQIALQLAHFRDRGKFCLTYEASMTRMFREG 600

Query: 601 RTETVRSCTSESTAFVQAMMEGSHTKADLRDLFQKAAKKHQNMYRLAMTGAGIDRHLFCL 660
           RTETVRSCTSESTAFVQAMMEGSHTKADLRDLFQKAAKKHQNMYRLAMTGAGIDRHLFCL
Sbjct: 601 RTETVRSCTSESTAFVQAMMEGSHTKADLRDLFQKAAKKHQNMYRLAMTGAGIDRHLFCL 660

Query: 661 YLVSKYLGVSSPFLAEVLSEPWRLSTSQIPQSQIRMFDPEQHPNHLGAGGGFGPVADDGY 720
           YLVSKYLGVSSPFLAEVLSEPWRLSTSQIPQSQIRMFDPEQHPNHLGAGGGFGPVADDGY
Sbjct: 661 YLVSKYLGVSSPFLAEVLSEPWRLSTSQIPQSQIRMFDPEQHPNHLGAGGGFGPVADDGY 720

Query: 721 GVSYMIAGENTIFFHISSKFSSSETNAQRFGNHIRKALLDIADLFQVPKAYS 772
           GVSYMIAGENTIFFHISSKFSSSETNAQRFGNHIRKALLDIADLFQVPKAYS
Sbjct: 721 GVSYMIAGENTIFFHISSKFSSSETNAQRFGNHIRKALLDIADLFQVPKAYS 772


>gi|23238256 carnitine palmitoyltransferase 1B isoform a [Homo
           sapiens]
          Length = 772

 Score = 1578 bits (4087), Expect = 0.0
 Identities = 772/772 (100%), Positives = 772/772 (100%)

Query: 1   MAEAHQAVAFQFTVTPDGVDFRLSREALKHVYLSGINSWKKRLIRIKNGILRGVYPGSPT 60
           MAEAHQAVAFQFTVTPDGVDFRLSREALKHVYLSGINSWKKRLIRIKNGILRGVYPGSPT
Sbjct: 1   MAEAHQAVAFQFTVTPDGVDFRLSREALKHVYLSGINSWKKRLIRIKNGILRGVYPGSPT 60

Query: 61  SWLVVIMATVGSSFCNVDISLGLVSCIQRCLPQGCGPYQTPQTRALLSMAIFSTGVWVTG 120
           SWLVVIMATVGSSFCNVDISLGLVSCIQRCLPQGCGPYQTPQTRALLSMAIFSTGVWVTG
Sbjct: 61  SWLVVIMATVGSSFCNVDISLGLVSCIQRCLPQGCGPYQTPQTRALLSMAIFSTGVWVTG 120

Query: 121 IFFFRQTLKLLLCYHGWMFEMHGKTSNLTRIWAMCIRLLSSRHPMLYSFQTSLPKLPVPR 180
           IFFFRQTLKLLLCYHGWMFEMHGKTSNLTRIWAMCIRLLSSRHPMLYSFQTSLPKLPVPR
Sbjct: 121 IFFFRQTLKLLLCYHGWMFEMHGKTSNLTRIWAMCIRLLSSRHPMLYSFQTSLPKLPVPR 180

Query: 181 VSATIQRYLESVRPLLDDEEYYRMELLAKEFQDKTAPRLQKYLVLKSWWASNYVSDWWEE 240
           VSATIQRYLESVRPLLDDEEYYRMELLAKEFQDKTAPRLQKYLVLKSWWASNYVSDWWEE
Sbjct: 181 VSATIQRYLESVRPLLDDEEYYRMELLAKEFQDKTAPRLQKYLVLKSWWASNYVSDWWEE 240

Query: 241 YIYLRGRSPLMVNSNYYVMDLVLIKNTDVQAARLGNIIHAMIMYRRKLDREEIKPVMALG 300
           YIYLRGRSPLMVNSNYYVMDLVLIKNTDVQAARLGNIIHAMIMYRRKLDREEIKPVMALG
Sbjct: 241 YIYLRGRSPLMVNSNYYVMDLVLIKNTDVQAARLGNIIHAMIMYRRKLDREEIKPVMALG 300

Query: 301 IVPMCSYQMERMFNTTRIPGKDTDVLQHLSDSRHVAVYHKGRFFKLWLYEGARLLKPQDL 360
           IVPMCSYQMERMFNTTRIPGKDTDVLQHLSDSRHVAVYHKGRFFKLWLYEGARLLKPQDL
Sbjct: 301 IVPMCSYQMERMFNTTRIPGKDTDVLQHLSDSRHVAVYHKGRFFKLWLYEGARLLKPQDL 360

Query: 361 EMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQARQAFFSSGKNKAALEAIERAAFFVA 420
           EMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQARQAFFSSGKNKAALEAIERAAFFVA
Sbjct: 361 EMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQARQAFFSSGKNKAALEAIERAAFFVA 420

Query: 421 LDEESYSYDPEDEASLSLYGKALLHGNCYNRWFDKSFTLISFKNGQLGLNAEHAWADAPI 480
           LDEESYSYDPEDEASLSLYGKALLHGNCYNRWFDKSFTLISFKNGQLGLNAEHAWADAPI
Sbjct: 421 LDEESYSYDPEDEASLSLYGKALLHGNCYNRWFDKSFTLISFKNGQLGLNAEHAWADAPI 480

Query: 481 IGHLWEFVLGTDSFHLGYTETGHCLGKPNPALAPPTRLQWDIPKQCQAVIESSYQVAKAL 540
           IGHLWEFVLGTDSFHLGYTETGHCLGKPNPALAPPTRLQWDIPKQCQAVIESSYQVAKAL
Sbjct: 481 IGHLWEFVLGTDSFHLGYTETGHCLGKPNPALAPPTRLQWDIPKQCQAVIESSYQVAKAL 540

Query: 541 ADDVELYCFQFLPFGKGLIKKCRTSPDAFVQIALQLAHFRDRGKFCLTYEASMTRMFREG 600
           ADDVELYCFQFLPFGKGLIKKCRTSPDAFVQIALQLAHFRDRGKFCLTYEASMTRMFREG
Sbjct: 541 ADDVELYCFQFLPFGKGLIKKCRTSPDAFVQIALQLAHFRDRGKFCLTYEASMTRMFREG 600

Query: 601 RTETVRSCTSESTAFVQAMMEGSHTKADLRDLFQKAAKKHQNMYRLAMTGAGIDRHLFCL 660
           RTETVRSCTSESTAFVQAMMEGSHTKADLRDLFQKAAKKHQNMYRLAMTGAGIDRHLFCL
Sbjct: 601 RTETVRSCTSESTAFVQAMMEGSHTKADLRDLFQKAAKKHQNMYRLAMTGAGIDRHLFCL 660

Query: 661 YLVSKYLGVSSPFLAEVLSEPWRLSTSQIPQSQIRMFDPEQHPNHLGAGGGFGPVADDGY 720
           YLVSKYLGVSSPFLAEVLSEPWRLSTSQIPQSQIRMFDPEQHPNHLGAGGGFGPVADDGY
Sbjct: 661 YLVSKYLGVSSPFLAEVLSEPWRLSTSQIPQSQIRMFDPEQHPNHLGAGGGFGPVADDGY 720

Query: 721 GVSYMIAGENTIFFHISSKFSSSETNAQRFGNHIRKALLDIADLFQVPKAYS 772
           GVSYMIAGENTIFFHISSKFSSSETNAQRFGNHIRKALLDIADLFQVPKAYS
Sbjct: 721 GVSYMIAGENTIFFHISSKFSSSETNAQRFGNHIRKALLDIADLFQVPKAYS 772


>gi|223468670 carnitine palmitoyltransferase 1B isoform c [Homo
           sapiens]
          Length = 738

 Score = 1494 bits (3869), Expect = 0.0
 Identities = 738/772 (95%), Positives = 738/772 (95%), Gaps = 34/772 (4%)

Query: 1   MAEAHQAVAFQFTVTPDGVDFRLSREALKHVYLSGINSWKKRLIRIKNGILRGVYPGSPT 60
           MAEAHQAVAFQFTVTPDGVDFRLSREALKHVYLSGINSWKKRLIRIKNGILRGVYPGSPT
Sbjct: 1   MAEAHQAVAFQFTVTPDGVDFRLSREALKHVYLSGINSWKKRLIRIKNGILRGVYPGSPT 60

Query: 61  SWLVVIMATVGSSFCNVDISLGLVSCIQRCLPQGCGPYQTPQTRALLSMAIFSTGVWVTG 120
           SWLVVIMATVGSSFCNVDISLGLVSCIQRCLPQGCGPYQTPQTRALLSMAIFSTGVWVTG
Sbjct: 61  SWLVVIMATVGSSFCNVDISLGLVSCIQRCLPQGCGPYQTPQTRALLSMAIFSTGVWVTG 120

Query: 121 IFFFRQTLKLLLCYHGWMFEMHGKTSNLTRIWAMCIRLLSSRHPMLYSFQTSLPKLPVPR 180
           IFFFRQTLKLLLCYHGWMFEMHGKTSNLTRIWA                           
Sbjct: 121 IFFFRQTLKLLLCYHGWMFEMHGKTSNLTRIWA--------------------------- 153

Query: 181 VSATIQRYLESVRPLLDDEEYYRMELLAKEFQDKTAPRLQKYLVLKSWWASNYVSDWWEE 240
                  YLESVRPLLDDEEYYRMELLAKEFQDKTAPRLQKYLVLKSWWASNYVSDWWEE
Sbjct: 154 -------YLESVRPLLDDEEYYRMELLAKEFQDKTAPRLQKYLVLKSWWASNYVSDWWEE 206

Query: 241 YIYLRGRSPLMVNSNYYVMDLVLIKNTDVQAARLGNIIHAMIMYRRKLDREEIKPVMALG 300
           YIYLRGRSPLMVNSNYYVMDLVLIKNTDVQAARLGNIIHAMIMYRRKLDREEIKPVMALG
Sbjct: 207 YIYLRGRSPLMVNSNYYVMDLVLIKNTDVQAARLGNIIHAMIMYRRKLDREEIKPVMALG 266

Query: 301 IVPMCSYQMERMFNTTRIPGKDTDVLQHLSDSRHVAVYHKGRFFKLWLYEGARLLKPQDL 360
           IVPMCSYQMERMFNTTRIPGKDTDVLQHLSDSRHVAVYHKGRFFKLWLYEGARLLKPQDL
Sbjct: 267 IVPMCSYQMERMFNTTRIPGKDTDVLQHLSDSRHVAVYHKGRFFKLWLYEGARLLKPQDL 326

Query: 361 EMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQARQAFFSSGKNKAALEAIERAAFFVA 420
           EMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQARQAFFSSGKNKAALEAIERAAFFVA
Sbjct: 327 EMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQARQAFFSSGKNKAALEAIERAAFFVA 386

Query: 421 LDEESYSYDPEDEASLSLYGKALLHGNCYNRWFDKSFTLISFKNGQLGLNAEHAWADAPI 480
           LDEESYSYDPEDEASLSLYGKALLHGNCYNRWFDKSFTLISFKNGQLGLNAEHAWADAPI
Sbjct: 387 LDEESYSYDPEDEASLSLYGKALLHGNCYNRWFDKSFTLISFKNGQLGLNAEHAWADAPI 446

Query: 481 IGHLWEFVLGTDSFHLGYTETGHCLGKPNPALAPPTRLQWDIPKQCQAVIESSYQVAKAL 540
           IGHLWEFVLGTDSFHLGYTETGHCLGKPNPALAPPTRLQWDIPKQCQAVIESSYQVAKAL
Sbjct: 447 IGHLWEFVLGTDSFHLGYTETGHCLGKPNPALAPPTRLQWDIPKQCQAVIESSYQVAKAL 506

Query: 541 ADDVELYCFQFLPFGKGLIKKCRTSPDAFVQIALQLAHFRDRGKFCLTYEASMTRMFREG 600
           ADDVELYCFQFLPFGKGLIKKCRTSPDAFVQIALQLAHFRDRGKFCLTYEASMTRMFREG
Sbjct: 507 ADDVELYCFQFLPFGKGLIKKCRTSPDAFVQIALQLAHFRDRGKFCLTYEASMTRMFREG 566

Query: 601 RTETVRSCTSESTAFVQAMMEGSHTKADLRDLFQKAAKKHQNMYRLAMTGAGIDRHLFCL 660
           RTETVRSCTSESTAFVQAMMEGSHTKADLRDLFQKAAKKHQNMYRLAMTGAGIDRHLFCL
Sbjct: 567 RTETVRSCTSESTAFVQAMMEGSHTKADLRDLFQKAAKKHQNMYRLAMTGAGIDRHLFCL 626

Query: 661 YLVSKYLGVSSPFLAEVLSEPWRLSTSQIPQSQIRMFDPEQHPNHLGAGGGFGPVADDGY 720
           YLVSKYLGVSSPFLAEVLSEPWRLSTSQIPQSQIRMFDPEQHPNHLGAGGGFGPVADDGY
Sbjct: 627 YLVSKYLGVSSPFLAEVLSEPWRLSTSQIPQSQIRMFDPEQHPNHLGAGGGFGPVADDGY 686

Query: 721 GVSYMIAGENTIFFHISSKFSSSETNAQRFGNHIRKALLDIADLFQVPKAYS 772
           GVSYMIAGENTIFFHISSKFSSSETNAQRFGNHIRKALLDIADLFQVPKAYS
Sbjct: 687 GVSYMIAGENTIFFHISSKFSSSETNAQRFGNHIRKALLDIADLFQVPKAYS 738


>gi|73623030 carnitine palmitoyltransferase 1A liver isoform 1 [Homo
           sapiens]
          Length = 773

 Score = 1031 bits (2665), Expect = 0.0
 Identities = 485/767 (63%), Positives = 602/767 (78%), Gaps = 4/767 (0%)

Query: 1   MAEAHQAVAFQFTVTPDGVDFRLSREALKHVYLSGINSWKKRLIRIKNGILRGVYPGSPT 60
           MAEAHQAVAFQFTVTPDG+D RLS EAL+ +YLSG++SWKK+ IR KNGI+ GVYP SP+
Sbjct: 1   MAEAHQAVAFQFTVTPDGIDLRLSHEALRQIYLSGLHSWKKKFIRFKNGIITGVYPASPS 60

Query: 61  SWLVVIMATVGSSFCNVDISLGLVSCIQRCLPQGCGPYQTPQTRALLSMAIFSTGVWVTG 120
           SWL+V++  + + +  +D SLG+++ I R L        + QT+ ++S  +F TG+WV  
Sbjct: 61  SWLIVVVGVMTTMYAKIDPSLGIIAKINRTLETA--NCMSSQTKNVVSGVLFGTGLWVAL 118

Query: 121 IFFFRQTLKLLLCYHGWMFEMHGKTSNLTRIWAMCIRLLSSRHPMLYSFQTSLPKLPVPR 180
           I   R +LK+LL YHGWMF  HGK S  T+IW   +++ S R PMLYSFQTSLP+LPVP 
Sbjct: 119 IVTMRYSLKVLLSYHGWMFTEHGKMSRATKIWMGMVKIFSGRKPMLYSFQTSLPRLPVPA 178

Query: 181 VSATIQRYLESVRPLLDDEEYYRMELLAKEFQDKTAPRLQKYLVLKSWWASNYVSDWWEE 240
           V  T+ RYL+SVRPL+ +E++ RM  LA++F     PRLQ YL LKSWWA+NYVSDWWEE
Sbjct: 179 VKDTVNRYLQSVRPLMKEEDFKRMTALAQDFAVGLGPRLQWYLKLKSWWATNYVSDWWEE 238

Query: 241 YIYLRGRSPLMVNSNYYVMDLVLIKNTDVQAARLGNIIHAMIMYRRKLDREEIKPVMALG 300
           YIYLRGR PLMVNSNYY MDL+ I  T +QAAR GN IHA+++YRRKLDREEIKP+  LG
Sbjct: 239 YIYLRGRGPLMVNSNYYAMDLLYILPTHIQAARAGNAIHAILLYRRKLDREEIKPIRLLG 298

Query: 301 -IVPMCSYQMERMFNTTRIPGKDTDVLQHLSDSRHVAVYHKGRFFKLWLYEGARLLKPQD 359
             +P+CS Q ERMFNT+RIPG++TD +QH+ DS+H+ VYH+GR+FK+WLY   RLLKP++
Sbjct: 299 STIPLCSAQWERMFNTSRIPGEETDTIQHMRDSKHIVVYHRGRYFKVWLYHDGRLLKPRE 358

Query: 360 LEMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQARQAFFSSGKNKAALEAIERAAFFV 419
           +E Q QRILD+ S PQPGE +LAALTAG RV WA+ RQA+F  GKNK +L+A+E+AAFFV
Sbjct: 359 MEQQMQRILDNTSEPQPGEARLAALTAGDRVPWARCRQAYFGRGKNKQSLDAVEKAAFFV 418

Query: 420 ALDEESYSYDPED-EASLSLYGKALLHGNCYNRWFDKSFTLISFKNGQLGLNAEHAWADA 478
            LDE    Y  ED + S+  Y K+LLHG CY+RWFDKSFT + FKNG++GLNAEH+WADA
Sbjct: 419 TLDETEEGYRSEDPDTSMDSYAKSLLHGRCYDRWFDKSFTFVVFKNGKMGLNAEHSWADA 478

Query: 479 PIIGHLWEFVLGTDSFHLGYTETGHCLGKPNPALAPPTRLQWDIPKQCQAVIESSYQVAK 538
           PI+ HLWE+V+  DS  LGY E GHC G  NP +  PTRLQWDIP +CQ VIE+S   A 
Sbjct: 479 PIVAHLWEYVMSIDSLQLGYAEDGHCKGDINPNIPYPTRLQWDIPGECQEVIETSLNTAN 538

Query: 539 ALADDVELYCFQFLPFGKGLIKKCRTSPDAFVQIALQLAHFRDRGKFCLTYEASMTRMFR 598
            LA+DV+ + F F+ FGKG+IKKCRTSPDAFVQ+ALQLAH++D GKFCLTYEASMTR+FR
Sbjct: 539 LLANDVDFHSFPFVAFGKGIIKKCRTSPDAFVQLALQLAHYKDMGKFCLTYEASMTRLFR 598

Query: 599 EGRTETVRSCTSESTAFVQAMMEGSHTKADLRDLFQKAAKKHQNMYRLAMTGAGIDRHLF 658
           EGRTETVRSCT+ES  FV+AM++ + T      LF+ A++KHQ+MYRLAMTG+GIDRHLF
Sbjct: 599 EGRTETVRSCTTESCDFVRAMVDPAQTVEQRLKLFKLASEKHQHMYRLAMTGSGIDRHLF 658

Query: 659 CLYLVSKYLGVSSPFLAEVLSEPWRLSTSQIPQSQIRMFDPEQHPNHLGAGGGFGPVADD 718
           CLY+VSKYL V SPFL EVLSEPWRLSTSQ PQ Q+ +FD E +P ++ +GGGFGPVADD
Sbjct: 659 CLYVVSKYLAVESPFLKEVLSEPWRLSTSQTPQQQVELFDLENNPEYVSSGGGFGPVADD 718

Query: 719 GYGVSYMIAGENTIFFHISSKFSSSETNAQRFGNHIRKALLDIADLF 765
           GYGVSY++ GEN I FHISSKFS  ET++ RFG H+++A+ DI  LF
Sbjct: 719 GYGVSYILVGENLINFHISSKFSCPETDSHRFGRHLKEAMTDIITLF 765


>gi|73623028 carnitine palmitoyltransferase 1A liver isoform 2 [Homo
           sapiens]
          Length = 756

 Score = 1009 bits (2610), Expect = 0.0
 Identities = 476/747 (63%), Positives = 587/747 (78%), Gaps = 4/747 (0%)

Query: 1   MAEAHQAVAFQFTVTPDGVDFRLSREALKHVYLSGINSWKKRLIRIKNGILRGVYPGSPT 60
           MAEAHQAVAFQFTVTPDG+D RLS EAL+ +YLSG++SWKK+ IR KNGI+ GVYP SP+
Sbjct: 1   MAEAHQAVAFQFTVTPDGIDLRLSHEALRQIYLSGLHSWKKKFIRFKNGIITGVYPASPS 60

Query: 61  SWLVVIMATVGSSFCNVDISLGLVSCIQRCLPQGCGPYQTPQTRALLSMAIFSTGVWVTG 120
           SWL+V++  + + +  +D SLG+++ I R L        + QT+ ++S  +F TG+WV  
Sbjct: 61  SWLIVVVGVMTTMYAKIDPSLGIIAKINRTLETA--NCMSSQTKNVVSGVLFGTGLWVAL 118

Query: 121 IFFFRQTLKLLLCYHGWMFEMHGKTSNLTRIWAMCIRLLSSRHPMLYSFQTSLPKLPVPR 180
           I   R +LK+LL YHGWMF  HGK S  T+IW   +++ S R PMLYSFQTSLP+LPVP 
Sbjct: 119 IVTMRYSLKVLLSYHGWMFTEHGKMSRATKIWMGMVKIFSGRKPMLYSFQTSLPRLPVPA 178

Query: 181 VSATIQRYLESVRPLLDDEEYYRMELLAKEFQDKTAPRLQKYLVLKSWWASNYVSDWWEE 240
           V  T+ RYL+SVRPL+ +E++ RM  LA++F     PRLQ YL LKSWWA+NYVSDWWEE
Sbjct: 179 VKDTVNRYLQSVRPLMKEEDFKRMTALAQDFAVGLGPRLQWYLKLKSWWATNYVSDWWEE 238

Query: 241 YIYLRGRSPLMVNSNYYVMDLVLIKNTDVQAARLGNIIHAMIMYRRKLDREEIKPVMALG 300
           YIYLRGR PLMVNSNYY MDL+ I  T +QAAR GN IHA+++YRRKLDREEIKP+  LG
Sbjct: 239 YIYLRGRGPLMVNSNYYAMDLLYILPTHIQAARAGNAIHAILLYRRKLDREEIKPIRLLG 298

Query: 301 -IVPMCSYQMERMFNTTRIPGKDTDVLQHLSDSRHVAVYHKGRFFKLWLYEGARLLKPQD 359
             +P+CS Q ERMFNT+RIPG++TD +QH+ DS+H+ VYH+GR+FK+WLY   RLLKP++
Sbjct: 299 STIPLCSAQWERMFNTSRIPGEETDTIQHMRDSKHIVVYHRGRYFKVWLYHDGRLLKPRE 358

Query: 360 LEMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQARQAFFSSGKNKAALEAIERAAFFV 419
           +E Q QRILD+ S PQPGE +LAALTAG RV WA+ RQA+F  GKNK +L+A+E+AAFFV
Sbjct: 359 MEQQMQRILDNTSEPQPGEARLAALTAGDRVPWARCRQAYFGRGKNKQSLDAVEKAAFFV 418

Query: 420 ALDEESYSYDPED-EASLSLYGKALLHGNCYNRWFDKSFTLISFKNGQLGLNAEHAWADA 478
            LDE    Y  ED + S+  Y K+LLHG CY+RWFDKSFT + FKNG++GLNAEH+WADA
Sbjct: 419 TLDETEEGYRSEDPDTSMDSYAKSLLHGRCYDRWFDKSFTFVVFKNGKMGLNAEHSWADA 478

Query: 479 PIIGHLWEFVLGTDSFHLGYTETGHCLGKPNPALAPPTRLQWDIPKQCQAVIESSYQVAK 538
           PI+ HLWE+V+  DS  LGY E GHC G  NP +  PTRLQWDIP +CQ VIE+S   A 
Sbjct: 479 PIVAHLWEYVMSIDSLQLGYAEDGHCKGDINPNIPYPTRLQWDIPGECQEVIETSLNTAN 538

Query: 539 ALADDVELYCFQFLPFGKGLIKKCRTSPDAFVQIALQLAHFRDRGKFCLTYEASMTRMFR 598
            LA+DV+ + F F+ FGKG+IKKCRTSPDAFVQ+ALQLAH++D GKFCLTYEASMTR+FR
Sbjct: 539 LLANDVDFHSFPFVAFGKGIIKKCRTSPDAFVQLALQLAHYKDMGKFCLTYEASMTRLFR 598

Query: 599 EGRTETVRSCTSESTAFVQAMMEGSHTKADLRDLFQKAAKKHQNMYRLAMTGAGIDRHLF 658
           EGRTETVRSCT+ES  FV+AM++ + T      LF+ A++KHQ+MYRLAMTG+GIDRHLF
Sbjct: 599 EGRTETVRSCTTESCDFVRAMVDPAQTVEQRLKLFKLASEKHQHMYRLAMTGSGIDRHLF 658

Query: 659 CLYLVSKYLGVSSPFLAEVLSEPWRLSTSQIPQSQIRMFDPEQHPNHLGAGGGFGPVADD 718
           CLY+VSKYL V SPFL EVLSEPWRLSTSQ PQ Q+ +FD E +P ++ +GGGFGPVADD
Sbjct: 659 CLYVVSKYLAVESPFLKEVLSEPWRLSTSQTPQQQVELFDLENNPEYVSSGGGFGPVADD 718

Query: 719 GYGVSYMIAGENTIFFHISSKFSSSET 745
           GYGVSY++ GEN I FHISSKFS  ET
Sbjct: 719 GYGVSYILVGENLINFHISSKFSCPET 745


>gi|22748777 carnitine palmitoyltransferase 1C isoform 2 [Homo
           sapiens]
          Length = 803

 Score =  826 bits (2134), Expect = 0.0
 Identities = 408/767 (53%), Positives = 533/767 (69%), Gaps = 5/767 (0%)

Query: 1   MAEAHQAVAFQFTVTPDGVDFRLSREALKHVYLSGINSWKKRLIRIKNGILRGVYPGSPT 60
           MAEAHQAV F+ ++T DG +  LS   L+ +YLSG+ SWK+ L R  N  L GV+P SP 
Sbjct: 1   MAEAHQAVGFRPSLTSDGAEVELSAPVLQEIYLSGLRSWKRHLSRFWNDFLTGVFPASPL 60

Query: 61  SWLVVIMATVGSSFCNVDISLGLVSCIQRCLPQGCGPYQTPQTRALLSMAIFSTGVWVTG 120
           SWL +  A   + F  +D SLGL+  I+  LP   G +     R +L+ A+F++ +W   
Sbjct: 61  SWLFLFSAIQLAWFLQLDPSLGLMEKIKELLPDWGGQHHG--LRGVLAAALFASCLWGAL 118

Query: 121 IFFFRQTLKLLLCYHGWMFEMHGKTSNLTRIWAMCIRLLSSRHPMLYSFQTSLPKLPVPR 180
           IF     L+LLL YHGW+ E HG  S+ T+ W   +R+ S RHPML+S+Q SLP+ PVP 
Sbjct: 119 IFTLHVALRLLLSYHGWLLEPHGAMSSPTKTWLALVRIFSGRHPMLFSYQRSLPRQPVPS 178

Query: 181 VSATIQRYLESVRPLLDDEEYYRMELLAKEFQDKTAPRLQKYLVLKSWWASNYVSDWWEE 240
           V  T+++YLESVRP+L DE++    +LA+EF    A  LQ YL LKSWWASNYVSDWWEE
Sbjct: 179 VQDTVRKYLESVRPILSDEDFDWTAVLAQEFLRLQASLLQWYLRLKSWWASNYVSDWWEE 238

Query: 241 YIYLRGRSPLMVNSNYYVMDLVLIKNTDVQAARLGNIIHAMIMYRRKLDREEIKPVMALG 300
           ++YLR R+PLMVNSNYY+MD + +  T +QAAR GN +HA+++YR +L+R+EI P + +G
Sbjct: 239 FVYLRSRNPLMVNSNYYMMDFLYVTPTPLQAARAGNAVHALLLYRHRLNRQEIPPTLLMG 298

Query: 301 IVPMCSYQMERMFNTTRIPGKDTDVLQHLSDSRHVAVYHKGRFFKLWLYEGARLLKPQDL 360
           + P+CS Q E++FNTTRIPG   D ++HL DS+HVAV+H+GRFF++  +    LL P+ L
Sbjct: 299 MRPLCSAQYEKIFNTTRIPGVQKDYIRHLHDSQHVAVFHRGRFFRMGTHSRNSLLSPRAL 358

Query: 361 EMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQARQAFFSSGKNKAALEAIERAAFFVA 420
           E QFQRILDDPSP  P EE LAALTA  R  WAQ R +  +      ALEA+E AAFFV+
Sbjct: 359 EQQFQRILDDPSPACPHEEHLAALTAAPRGTWAQVRTSLKTQAAE--ALEAVEGAAFFVS 416

Query: 421 LDEESYSYDPEDEA-SLSLYGKALLHGNCYNRWFDKSFTLISFKNGQLGLNAEHAWADAP 479
           LD E      ED A SL  Y  ALL G  ++RWFDKSFTLI F NG+LGL+ EH+WAD P
Sbjct: 417 LDAEPAGLTREDPAASLDAYAHALLAGRGHDRWFDKSFTLIVFSNGKLGLSVEHSWADCP 476

Query: 480 IIGHLWEFVLGTDSFHLGYTETGHCLGKPNPALAPPTRLQWDIPKQCQAVIESSYQVAKA 539
           I GH+WEF L T+ F LGY+  GHC G P+P L  P RLQWD+P Q  + I  + + AK 
Sbjct: 477 ISGHMWEFTLATECFQLGYSTDGHCKGHPDPTLPQPQRLQWDLPDQIHSSISLALRGAKI 536

Query: 540 LADDVELYCFQFLPFGKGLIKKCRTSPDAFVQIALQLAHFRDRGKFCLTYEASMTRMFRE 599
           L+++V+ +   F  FGK  I++C  S D+F+QIALQLAHFRDRG+FCLTYE++MTR+F E
Sbjct: 537 LSENVDCHVVPFSLFGKSFIRRCHLSSDSFIQIALQLAHFRDRGQFCLTYESAMTRLFLE 596

Query: 600 GRTETVRSCTSESTAFVQAMMEGSHTKADLRDLFQKAAKKHQNMYRLAMTGAGIDRHLFC 659
           GRTETVRSCT E+  FV+AM +   T      LF+ A  KHQ + + AM+G G+DRHLF 
Sbjct: 597 GRTETVRSCTREACNFVRAMEDKEKTDPQCLALFRVAVDKHQALLKAAMSGQGVDRHLFA 656

Query: 660 LYLVSKYLGVSSPFLAEVLSEPWRLSTSQIPQSQIRMFDPEQHPNHLGAGGGFGPVADDG 719
           LY+VS++L + SPFL +V SE W+LSTSQIP  Q+ +FD   +P+++ +GGGFGP  D G
Sbjct: 657 LYIVSRFLHLQSPFLTQVHSEQWQLSTSQIPVQQMHLFDVHNYPDYVSSGGGFGPADDHG 716

Query: 720 YGVSYMIAGENTIFFHISSKFSSSETNAQRFGNHIRKALLDIADLFQ 766
           YGVSY+  G+  I FHISSK SS++T++ R G HI  ALLD+A LFQ
Sbjct: 717 YGVSYIFMGDGMITFHISSKKSSTKTDSHRLGQHIEDALLDVASLFQ 763


>gi|209862905 carnitine palmitoyltransferase 1C isoform 1 [Homo
           sapiens]
          Length = 792

 Score =  811 bits (2096), Expect = 0.0
 Identities = 405/767 (52%), Positives = 527/767 (68%), Gaps = 16/767 (2%)

Query: 1   MAEAHQAVAFQFTVTPDGVDFRLSREALKHVYLSGINSWKKRLIRIKNGILRGVYPGSPT 60
           MAEAHQAV F+ ++T DG +  LS   L+ +YLSG+ SWK+ L R  N  L GV+P SP 
Sbjct: 1   MAEAHQAVGFRPSLTSDGAEVELSAPVLQEIYLSGLRSWKRHLSRFWNDFLTGVFPASPL 60

Query: 61  SWLVVIMATVGSSFCNVDISLGLVSCIQRCLPQGCGPYQTPQTRALLSMAIFSTGVWVTG 120
           SWL +  A   + F  +D SLGL+  I+  LP   G +     R +L+ A+F++ +W   
Sbjct: 61  SWLFLFSAIQLAWFLQLDPSLGLMEKIKELLPDWGGQHHG--LRGVLAAALFASCLWGAL 118

Query: 121 IFFFRQTLKLLLCYHGWMFEMHGKTSNLTRIWAMCIRLLSSRHPMLYSFQTSLPKLPVPR 180
           IF     L+LLL YHGW+ E HG  S+ T+ W   +R+ S RHPML+S+Q SLP+ PVP 
Sbjct: 119 IFTLHVALRLLLSYHGWLLEPHGAMSSPTKTWLALVRIFSGRHPMLFSYQRSLPRQPVPS 178

Query: 181 VSATIQRYLESVRPLLDDEEYYRMELLAKEFQDKTAPRLQKYLVLKSWWASNYVSDWWEE 240
           V  T+++YLESVRP+L DE++    +LA+EF    A  LQ YL LKSWWASNYVSDWWEE
Sbjct: 179 VQDTVRKYLESVRPILSDEDFDWTAVLAQEFLRLQASLLQWYLRLKSWWASNYVSDWWEE 238

Query: 241 YIYLRGRSPLMVNSNYYVMDLVLIKNTDVQAARLGNIIHAMIMYRRKLDREEIKPVMALG 300
           ++YLR R+PLMVNSNYY+M           AAR GN +HA+++YR +L+R+EI P + +G
Sbjct: 239 FVYLRSRNPLMVNSNYYMM-----------AARAGNAVHALLLYRHRLNRQEIPPTLLMG 287

Query: 301 IVPMCSYQMERMFNTTRIPGKDTDVLQHLSDSRHVAVYHKGRFFKLWLYEGARLLKPQDL 360
           + P+CS Q E++FNTTRIPG   D ++HL DS+HVAV+H+GRFF++  +    LL P+ L
Sbjct: 288 MRPLCSAQYEKIFNTTRIPGVQKDYIRHLHDSQHVAVFHRGRFFRMGTHSRNSLLSPRAL 347

Query: 361 EMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQARQAFFSSGKNKAALEAIERAAFFVA 420
           E QFQRILDDPSP  P EE LAALTA  R  WAQ R +  +      ALEA+E AAFFV+
Sbjct: 348 EQQFQRILDDPSPACPHEEHLAALTAAPRGTWAQVRTSLKTQAAE--ALEAVEGAAFFVS 405

Query: 421 LDEESYSYDPEDEA-SLSLYGKALLHGNCYNRWFDKSFTLISFKNGQLGLNAEHAWADAP 479
           LD E      ED A SL  Y  ALL G  ++RWFDKSFTLI F NG+LGL+ EH+WAD P
Sbjct: 406 LDAEPAGLTREDPAASLDAYAHALLAGRGHDRWFDKSFTLIVFSNGKLGLSVEHSWADCP 465

Query: 480 IIGHLWEFVLGTDSFHLGYTETGHCLGKPNPALAPPTRLQWDIPKQCQAVIESSYQVAKA 539
           I GH+WEF L T+ F LGY+  GHC G P+P L  P RLQWD+P Q  + I  + + AK 
Sbjct: 466 ISGHMWEFTLATECFQLGYSTDGHCKGHPDPTLPQPQRLQWDLPDQIHSSISLALRGAKI 525

Query: 540 LADDVELYCFQFLPFGKGLIKKCRTSPDAFVQIALQLAHFRDRGKFCLTYEASMTRMFRE 599
           L+++V+ +   F  FGK  I++C  S D+F+QIALQLAHFRDRG+FCLTYE++MTR+F E
Sbjct: 526 LSENVDCHVVPFSLFGKSFIRRCHLSSDSFIQIALQLAHFRDRGQFCLTYESAMTRLFLE 585

Query: 600 GRTETVRSCTSESTAFVQAMMEGSHTKADLRDLFQKAAKKHQNMYRLAMTGAGIDRHLFC 659
           GRTETVRSCT E+  FV+AM +   T      LF+ A  KHQ + + AM+G G+DRHLF 
Sbjct: 586 GRTETVRSCTREACNFVRAMEDKEKTDPQCLALFRVAVDKHQALLKAAMSGQGVDRHLFA 645

Query: 660 LYLVSKYLGVSSPFLAEVLSEPWRLSTSQIPQSQIRMFDPEQHPNHLGAGGGFGPVADDG 719
           LY+VS++L + SPFL +V SE W+LSTSQIP  Q+ +FD   +P+++ +GGGFGP  D G
Sbjct: 646 LYIVSRFLHLQSPFLTQVHSEQWQLSTSQIPVQQMHLFDVHNYPDYVSSGGGFGPADDHG 705

Query: 720 YGVSYMIAGENTIFFHISSKFSSSETNAQRFGNHIRKALLDIADLFQ 766
           YGVSY+  G+  I FHISSK SS++T++ R G HI  ALLD+A LFQ
Sbjct: 706 YGVSYIFMGDGMITFHISSKKSSTKTDSHRLGQHIEDALLDVASLFQ 752


>gi|223468674 carnitine palmitoyltransferase 1B isoform d [Homo
           sapiens]
          Length = 691

 Score =  729 bits (1881), Expect = 0.0
 Identities = 355/355 (100%), Positives = 355/355 (100%)

Query: 1   MAEAHQAVAFQFTVTPDGVDFRLSREALKHVYLSGINSWKKRLIRIKNGILRGVYPGSPT 60
           MAEAHQAVAFQFTVTPDGVDFRLSREALKHVYLSGINSWKKRLIRIKNGILRGVYPGSPT
Sbjct: 1   MAEAHQAVAFQFTVTPDGVDFRLSREALKHVYLSGINSWKKRLIRIKNGILRGVYPGSPT 60

Query: 61  SWLVVIMATVGSSFCNVDISLGLVSCIQRCLPQGCGPYQTPQTRALLSMAIFSTGVWVTG 120
           SWLVVIMATVGSSFCNVDISLGLVSCIQRCLPQGCGPYQTPQTRALLSMAIFSTGVWVTG
Sbjct: 61  SWLVVIMATVGSSFCNVDISLGLVSCIQRCLPQGCGPYQTPQTRALLSMAIFSTGVWVTG 120

Query: 121 IFFFRQTLKLLLCYHGWMFEMHGKTSNLTRIWAMCIRLLSSRHPMLYSFQTSLPKLPVPR 180
           IFFFRQTLKLLLCYHGWMFEMHGKTSNLTRIWAMCIRLLSSRHPMLYSFQTSLPKLPVPR
Sbjct: 121 IFFFRQTLKLLLCYHGWMFEMHGKTSNLTRIWAMCIRLLSSRHPMLYSFQTSLPKLPVPR 180

Query: 181 VSATIQRYLESVRPLLDDEEYYRMELLAKEFQDKTAPRLQKYLVLKSWWASNYVSDWWEE 240
           VSATIQRYLESVRPLLDDEEYYRMELLAKEFQDKTAPRLQKYLVLKSWWASNYVSDWWEE
Sbjct: 181 VSATIQRYLESVRPLLDDEEYYRMELLAKEFQDKTAPRLQKYLVLKSWWASNYVSDWWEE 240

Query: 241 YIYLRGRSPLMVNSNYYVMDLVLIKNTDVQAARLGNIIHAMIMYRRKLDREEIKPVMALG 300
           YIYLRGRSPLMVNSNYYVMDLVLIKNTDVQAARLGNIIHAMIMYRRKLDREEIKPVMALG
Sbjct: 241 YIYLRGRSPLMVNSNYYVMDLVLIKNTDVQAARLGNIIHAMIMYRRKLDREEIKPVMALG 300

Query: 301 IVPMCSYQMERMFNTTRIPGKDTDVLQHLSDSRHVAVYHKGRFFKLWLYEGARLL 355
           IVPMCSYQMERMFNTTRIPGKDTDVLQHLSDSRHVAVYHKGRFFKLWLYEGARLL
Sbjct: 301 IVPMCSYQMERMFNTTRIPGKDTDVLQHLSDSRHVAVYHKGRFFKLWLYEGARLL 355



 Score =  696 bits (1797), Expect = 0.0
 Identities = 337/337 (100%), Positives = 337/337 (100%)

Query: 436 LSLYGKALLHGNCYNRWFDKSFTLISFKNGQLGLNAEHAWADAPIIGHLWEFVLGTDSFH 495
           LSLYGKALLHGNCYNRWFDKSFTLISFKNGQLGLNAEHAWADAPIIGHLWEFVLGTDSFH
Sbjct: 355 LSLYGKALLHGNCYNRWFDKSFTLISFKNGQLGLNAEHAWADAPIIGHLWEFVLGTDSFH 414

Query: 496 LGYTETGHCLGKPNPALAPPTRLQWDIPKQCQAVIESSYQVAKALADDVELYCFQFLPFG 555
           LGYTETGHCLGKPNPALAPPTRLQWDIPKQCQAVIESSYQVAKALADDVELYCFQFLPFG
Sbjct: 415 LGYTETGHCLGKPNPALAPPTRLQWDIPKQCQAVIESSYQVAKALADDVELYCFQFLPFG 474

Query: 556 KGLIKKCRTSPDAFVQIALQLAHFRDRGKFCLTYEASMTRMFREGRTETVRSCTSESTAF 615
           KGLIKKCRTSPDAFVQIALQLAHFRDRGKFCLTYEASMTRMFREGRTETVRSCTSESTAF
Sbjct: 475 KGLIKKCRTSPDAFVQIALQLAHFRDRGKFCLTYEASMTRMFREGRTETVRSCTSESTAF 534

Query: 616 VQAMMEGSHTKADLRDLFQKAAKKHQNMYRLAMTGAGIDRHLFCLYLVSKYLGVSSPFLA 675
           VQAMMEGSHTKADLRDLFQKAAKKHQNMYRLAMTGAGIDRHLFCLYLVSKYLGVSSPFLA
Sbjct: 535 VQAMMEGSHTKADLRDLFQKAAKKHQNMYRLAMTGAGIDRHLFCLYLVSKYLGVSSPFLA 594

Query: 676 EVLSEPWRLSTSQIPQSQIRMFDPEQHPNHLGAGGGFGPVADDGYGVSYMIAGENTIFFH 735
           EVLSEPWRLSTSQIPQSQIRMFDPEQHPNHLGAGGGFGPVADDGYGVSYMIAGENTIFFH
Sbjct: 595 EVLSEPWRLSTSQIPQSQIRMFDPEQHPNHLGAGGGFGPVADDGYGVSYMIAGENTIFFH 654

Query: 736 ISSKFSSSETNAQRFGNHIRKALLDIADLFQVPKAYS 772
           ISSKFSSSETNAQRFGNHIRKALLDIADLFQVPKAYS
Sbjct: 655 ISSKFSSSETNAQRFGNHIRKALLDIADLFQVPKAYS 691


>gi|21618331 carnitine acetyltransferase precursor [Homo sapiens]
          Length = 626

 Score =  279 bits (713), Expect = 8e-75
 Identities = 203/619 (32%), Positives = 328/619 (52%), Gaps = 53/619 (8%)

Query: 170 QTSLPKLPVPRVSATIQRYLESVRPLLDDEEYYRMELLAKEFQDK--TAPRLQKYLVLKS 227
           Q +LP+LPVP +  ++  YL++++P++ +EE+   + L  EFQ       RLQK L  ++
Sbjct: 32  QDALPRLPVPPLQQSLDHYLKALQPIVSEEEWAHTKQLVDEFQASGGVGERLQKGLERRA 91

Query: 228 WWASNYVSDWWEEYIYLRGRSPLMVNSNYYVM----DLVLIKNTDVQAARLGNIIHAMIM 283
               N++S+WW +  YL+ R P+++ S+  VM    D V ++     AA+L   I  ++ 
Sbjct: 92  RKTENWLSEWWLKTAYLQYRQPVVIYSSPGVMLPKQDFVDLQGQLRFAAKL---IEGVLD 148

Query: 284 YRRKLDREEIKPVMALGIVPMCSYQMERMFNTTRIPGKDTDVLQHLSDSR----HVAVYH 339
           ++  +D E + PV  LG  P+C  Q  ++ ++ R+PG   D + + S ++    H+ V H
Sbjct: 149 FKVMIDNETL-PVEYLGGKPLCMNQYYQILSSCRVPGPKQDTVSNFSKTKKPPTHITVVH 207

Query: 340 KGRFFKLWLY--EGARLLKPQDLEMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQARQ 397
             +FF+L +Y  +G  L   Q + +Q ++I +  S  Q  +E +  LT+  R  WA+A  
Sbjct: 208 NYQFFELDVYHSDGTPLTADQ-IFVQLEKIWN--SSLQTNKEPVGILTSNHRNSWAKAYN 264

Query: 398 AFFSSGKNKAALEAIERAAFFVALDEESYSYDPEDEASLSLYGKALLHG-----NCYNRW 452
                  N+ ++ +I+++ F V LD        ED     + G+ +LHG     N  NRW
Sbjct: 265 TLIKDKVNRDSVRSIQKSIFTVCLDATMPRVS-EDVYRSHVAGQ-MLHGGGSRLNSGNRW 322

Query: 453 FDKSFTLISFKNGQLGLNAEHAWADAPIIGHLWEFVLGTDSFHLGYTETGHCLGKPNPAL 512
           FDK+   I  ++G  GL  EHA A+ P I  L ++V+        YT+    +  P   L
Sbjct: 323 FDKTLQFIVAEDGSCGLVYEHAAAEGPPIVTLLDYVIE-------YTKKPELVRSPMVPL 375

Query: 513 APPTRLQWDIPKQCQAVIESSYQVAKALADDVELYCFQFLPFGKGLIKKCRTSPDAFVQI 572
             P +L+++I  + ++ IE + Q    +  D+++    F  FGK   K  + SPDAF+Q+
Sbjct: 376 PMPKKLRFNITPEIKSDIEKAKQNLSIMIQDLDITVMVFHHFGKDFPKSEKLSPDAFIQM 435

Query: 573 ALQLAHFRDRGKFCLTYEASMTRMFREGRTETVRSCTSESTAFVQAMMEGSHTKADLRDL 632
           ALQLA++R  G+ C TYE++  RMF  GRT+T+RS + +S  FV+AM + S T+    +L
Sbjct: 436 ALQLAYYRIYGQACATYESASLRMFHLGRTDTIRSASMDSLTFVKAMDDSSVTEHQKVEL 495

Query: 633 FQKAAKKHQNMYRLAMTGAGIDRHLFCLYLVSKYLGVSSPFL----AEVLSEPWRLSTSQ 688
            +KA + H+     A+ G   DRHL  L L +    VS P +    +  ++  + LSTSQ
Sbjct: 496 LRKAVQAHRGYTDRAIRGEAFDRHLLGLKLQAIEDLVSMPDIFMDTSYAIAMHFHLSTSQ 555

Query: 689 IP-QSQIRMFDPEQHPNHLGAGGGFGPVADDGYGVSYMIAGENTIFFHISSKFSSSETNA 747
           +P ++   MF              FGPV  DGYGV Y    E  I F +S+  S +ETNA
Sbjct: 556 VPAKTDCVMF--------------FGPVVPDGYGVCYN-PMEAHINFSLSAYNSCAETNA 600

Query: 748 QRFGNHIRKALLDIADLFQ 766
            R  +++ KALLD+  L Q
Sbjct: 601 ARLAHYLEKALLDMRALLQ 619


>gi|188595668 choline acetyltransferase isoform 1 [Homo sapiens]
          Length = 630

 Score =  246 bits (628), Expect = 6e-65
 Identities = 192/619 (31%), Positives = 306/619 (49%), Gaps = 45/619 (7%)

Query: 168 SFQTSLPKLPVPRVSATIQRYLESVRPLLDDEEYYRMELLAKEF--QDKTAPRLQKYLVL 225
           S ++ LPKLPVP +  T+  YL+ +R L+ +E++ + + + ++F         LQ+ L+ 
Sbjct: 8   SEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGETLQQKLLE 67

Query: 226 KSWWASNYVSDWWEEYIYLRGRSPLMVNSNYYVMDLVL-IKNTDVQAARLGNIIHAMIMY 284
           +    +N+VS++W   +YL  R  L VNS+  V+        TD Q     ++I  ++ Y
Sbjct: 68  RQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASLISGVLSY 127

Query: 285 RRKLDREEIKPVMALGIV---PMCSYQMERMFNTTRIPG--KDTDVLQHLS---DSRHVA 336
           +  LD   I    A G +   P+C  Q   +F++ R+PG  +DT V Q+ S   +  HV 
Sbjct: 128 KALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIMPEPEHVI 187

Query: 337 VYHKGRFFKLWLYEGARLLKPQDLEMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQAR 396
           V    +FF L +    R L   DL  Q ++I+   S        +  LT+ GR EWA+AR
Sbjct: 188 VACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWAEAR 247

Query: 397 QAFFSSGKNKAALEAIERAAFFVALDEESYSYDPEDEASLSLYGKALLHGNCY-----NR 451
                   N+ +L+ IER    V LD        +   +L L     LHG  Y     NR
Sbjct: 248 TVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQL-----LHGGGYSKNGANR 302

Query: 452 WFDKSFTLISFKNGQLGLNAEHAWADAPIIGHLWEFVLGTDSFHLGYTETGHCLGKPNPA 511
           W+DKS   +  ++G  G+  EH+  D  ++    E +L     H+  +            
Sbjct: 303 WYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLK----HMTQSSRKLIRADSVSE 358

Query: 512 LAPPTRLQWDIPKQCQAVIESSYQVAKALADDVELYCFQFLPFGKGLIKKCRTSPDAFVQ 571
           L  P RL+W    + Q  + SS +  + +  +++   ++F  +GK  IKK + SPDAF+Q
Sbjct: 359 LPAPRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQ 418

Query: 572 IALQLAHFRDRGKFCLTYEASMTRMFREGRTETVRSCTSESTAFVQAMME-GSHTKADLR 630
           +ALQLA +R   +   TYE++  R F+EGR + +RS T E+ AFV+A+ +  +   A  +
Sbjct: 419 VALQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEK 478

Query: 631 DLFQKAAKKHQNMYR-LAMTGAGIDRHLFCLYLVSKYLGVSSP--FLAE--VLSEPWRLS 685
            L  K A + Q  Y  +A+TG  ID HL  L  +++ +    P  F+ E  ++S  + LS
Sbjct: 479 LLLLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLS 538

Query: 686 TSQIPQSQIRMFDPEQHPNHLGAGGGFGPVADDGYGVSYMIAGENTIFFHISSKFSSSET 745
           TSQ+P +   MF              +GPV  +GYG  Y    E TI F ISS  S  ET
Sbjct: 539 TSQVP-TTTEMF------------CCYGPVVPNGYGACYNPQPE-TILFCISSFHSCKET 584

Query: 746 NAQRFGNHIRKALLDIADL 764
           ++ +F   + ++L+D+ DL
Sbjct: 585 SSSKFAKAVEESLIDMRDL 603


>gi|218931226 choline acetyltransferase isoform 1 [Homo sapiens]
          Length = 630

 Score =  246 bits (628), Expect = 6e-65
 Identities = 192/619 (31%), Positives = 306/619 (49%), Gaps = 45/619 (7%)

Query: 168 SFQTSLPKLPVPRVSATIQRYLESVRPLLDDEEYYRMELLAKEF--QDKTAPRLQKYLVL 225
           S ++ LPKLPVP +  T+  YL+ +R L+ +E++ + + + ++F         LQ+ L+ 
Sbjct: 8   SEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGETLQQKLLE 67

Query: 226 KSWWASNYVSDWWEEYIYLRGRSPLMVNSNYYVMDLVL-IKNTDVQAARLGNIIHAMIMY 284
           +    +N+VS++W   +YL  R  L VNS+  V+        TD Q     ++I  ++ Y
Sbjct: 68  RQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASLISGVLSY 127

Query: 285 RRKLDREEIKPVMALGIV---PMCSYQMERMFNTTRIPG--KDTDVLQHLS---DSRHVA 336
           +  LD   I    A G +   P+C  Q   +F++ R+PG  +DT V Q+ S   +  HV 
Sbjct: 128 KALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIMPEPEHVI 187

Query: 337 VYHKGRFFKLWLYEGARLLKPQDLEMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQAR 396
           V    +FF L +    R L   DL  Q ++I+   S        +  LT+ GR EWA+AR
Sbjct: 188 VACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWAEAR 247

Query: 397 QAFFSSGKNKAALEAIERAAFFVALDEESYSYDPEDEASLSLYGKALLHGNCY-----NR 451
                   N+ +L+ IER    V LD        +   +L L     LHG  Y     NR
Sbjct: 248 TVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQL-----LHGGGYSKNGANR 302

Query: 452 WFDKSFTLISFKNGQLGLNAEHAWADAPIIGHLWEFVLGTDSFHLGYTETGHCLGKPNPA 511
           W+DKS   +  ++G  G+  EH+  D  ++    E +L     H+  +            
Sbjct: 303 WYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLK----HMTQSSRKLIRADSVSE 358

Query: 512 LAPPTRLQWDIPKQCQAVIESSYQVAKALADDVELYCFQFLPFGKGLIKKCRTSPDAFVQ 571
           L  P RL+W    + Q  + SS +  + +  +++   ++F  +GK  IKK + SPDAF+Q
Sbjct: 359 LPAPRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQ 418

Query: 572 IALQLAHFRDRGKFCLTYEASMTRMFREGRTETVRSCTSESTAFVQAMME-GSHTKADLR 630
           +ALQLA +R   +   TYE++  R F+EGR + +RS T E+ AFV+A+ +  +   A  +
Sbjct: 419 VALQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEK 478

Query: 631 DLFQKAAKKHQNMYR-LAMTGAGIDRHLFCLYLVSKYLGVSSP--FLAE--VLSEPWRLS 685
            L  K A + Q  Y  +A+TG  ID HL  L  +++ +    P  F+ E  ++S  + LS
Sbjct: 479 LLLLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLS 538

Query: 686 TSQIPQSQIRMFDPEQHPNHLGAGGGFGPVADDGYGVSYMIAGENTIFFHISSKFSSSET 745
           TSQ+P +   MF              +GPV  +GYG  Y    E TI F ISS  S  ET
Sbjct: 539 TSQVP-TTTEMF------------CCYGPVVPNGYGACYNPQPE-TILFCISSFHSCKET 584

Query: 746 NAQRFGNHIRKALLDIADL 764
           ++ +F   + ++L+D+ DL
Sbjct: 585 SSSKFAKAVEESLIDMRDL 603


>gi|218931224 choline acetyltransferase isoform 3 [Homo sapiens]
          Length = 666

 Score =  246 bits (628), Expect = 6e-65
 Identities = 192/619 (31%), Positives = 306/619 (49%), Gaps = 45/619 (7%)

Query: 168 SFQTSLPKLPVPRVSATIQRYLESVRPLLDDEEYYRMELLAKEF--QDKTAPRLQKYLVL 225
           S ++ LPKLPVP +  T+  YL+ +R L+ +E++ + + + ++F         LQ+ L+ 
Sbjct: 44  SEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGETLQQKLLE 103

Query: 226 KSWWASNYVSDWWEEYIYLRGRSPLMVNSNYYVMDLVL-IKNTDVQAARLGNIIHAMIMY 284
           +    +N+VS++W   +YL  R  L VNS+  V+        TD Q     ++I  ++ Y
Sbjct: 104 RQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASLISGVLSY 163

Query: 285 RRKLDREEIKPVMALGIV---PMCSYQMERMFNTTRIPG--KDTDVLQHLS---DSRHVA 336
           +  LD   I    A G +   P+C  Q   +F++ R+PG  +DT V Q+ S   +  HV 
Sbjct: 164 KALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIMPEPEHVI 223

Query: 337 VYHKGRFFKLWLYEGARLLKPQDLEMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQAR 396
           V    +FF L +    R L   DL  Q ++I+   S        +  LT+ GR EWA+AR
Sbjct: 224 VACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWAEAR 283

Query: 397 QAFFSSGKNKAALEAIERAAFFVALDEESYSYDPEDEASLSLYGKALLHGNCY-----NR 451
                   N+ +L+ IER    V LD        +   +L L     LHG  Y     NR
Sbjct: 284 TVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQL-----LHGGGYSKNGANR 338

Query: 452 WFDKSFTLISFKNGQLGLNAEHAWADAPIIGHLWEFVLGTDSFHLGYTETGHCLGKPNPA 511
           W+DKS   +  ++G  G+  EH+  D  ++    E +L     H+  +            
Sbjct: 339 WYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLK----HMTQSSRKLIRADSVSE 394

Query: 512 LAPPTRLQWDIPKQCQAVIESSYQVAKALADDVELYCFQFLPFGKGLIKKCRTSPDAFVQ 571
           L  P RL+W    + Q  + SS +  + +  +++   ++F  +GK  IKK + SPDAF+Q
Sbjct: 395 LPAPRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQ 454

Query: 572 IALQLAHFRDRGKFCLTYEASMTRMFREGRTETVRSCTSESTAFVQAMME-GSHTKADLR 630
           +ALQLA +R   +   TYE++  R F+EGR + +RS T E+ AFV+A+ +  +   A  +
Sbjct: 455 VALQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEK 514

Query: 631 DLFQKAAKKHQNMYR-LAMTGAGIDRHLFCLYLVSKYLGVSSP--FLAE--VLSEPWRLS 685
            L  K A + Q  Y  +A+TG  ID HL  L  +++ +    P  F+ E  ++S  + LS
Sbjct: 515 LLLLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLS 574

Query: 686 TSQIPQSQIRMFDPEQHPNHLGAGGGFGPVADDGYGVSYMIAGENTIFFHISSKFSSSET 745
           TSQ+P +   MF              +GPV  +GYG  Y    E TI F ISS  S  ET
Sbjct: 575 TSQVP-TTTEMF------------CCYGPVVPNGYGACYNPQPE-TILFCISSFHSCKET 620

Query: 746 NAQRFGNHIRKALLDIADL 764
           ++ +F   + ++L+D+ DL
Sbjct: 621 SSSKFAKAVEESLIDMRDL 639


>gi|218931221 choline acetyltransferase isoform 1 [Homo sapiens]
          Length = 630

 Score =  246 bits (628), Expect = 6e-65
 Identities = 192/619 (31%), Positives = 306/619 (49%), Gaps = 45/619 (7%)

Query: 168 SFQTSLPKLPVPRVSATIQRYLESVRPLLDDEEYYRMELLAKEF--QDKTAPRLQKYLVL 225
           S ++ LPKLPVP +  T+  YL+ +R L+ +E++ + + + ++F         LQ+ L+ 
Sbjct: 8   SEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGETLQQKLLE 67

Query: 226 KSWWASNYVSDWWEEYIYLRGRSPLMVNSNYYVMDLVL-IKNTDVQAARLGNIIHAMIMY 284
           +    +N+VS++W   +YL  R  L VNS+  V+        TD Q     ++I  ++ Y
Sbjct: 68  RQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASLISGVLSY 127

Query: 285 RRKLDREEIKPVMALGIV---PMCSYQMERMFNTTRIPG--KDTDVLQHLS---DSRHVA 336
           +  LD   I    A G +   P+C  Q   +F++ R+PG  +DT V Q+ S   +  HV 
Sbjct: 128 KALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIMPEPEHVI 187

Query: 337 VYHKGRFFKLWLYEGARLLKPQDLEMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQAR 396
           V    +FF L +    R L   DL  Q ++I+   S        +  LT+ GR EWA+AR
Sbjct: 188 VACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWAEAR 247

Query: 397 QAFFSSGKNKAALEAIERAAFFVALDEESYSYDPEDEASLSLYGKALLHGNCY-----NR 451
                   N+ +L+ IER    V LD        +   +L L     LHG  Y     NR
Sbjct: 248 TVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQL-----LHGGGYSKNGANR 302

Query: 452 WFDKSFTLISFKNGQLGLNAEHAWADAPIIGHLWEFVLGTDSFHLGYTETGHCLGKPNPA 511
           W+DKS   +  ++G  G+  EH+  D  ++    E +L     H+  +            
Sbjct: 303 WYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLK----HMTQSSRKLIRADSVSE 358

Query: 512 LAPPTRLQWDIPKQCQAVIESSYQVAKALADDVELYCFQFLPFGKGLIKKCRTSPDAFVQ 571
           L  P RL+W    + Q  + SS +  + +  +++   ++F  +GK  IKK + SPDAF+Q
Sbjct: 359 LPAPRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQ 418

Query: 572 IALQLAHFRDRGKFCLTYEASMTRMFREGRTETVRSCTSESTAFVQAMME-GSHTKADLR 630
           +ALQLA +R   +   TYE++  R F+EGR + +RS T E+ AFV+A+ +  +   A  +
Sbjct: 419 VALQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEK 478

Query: 631 DLFQKAAKKHQNMYR-LAMTGAGIDRHLFCLYLVSKYLGVSSP--FLAE--VLSEPWRLS 685
            L  K A + Q  Y  +A+TG  ID HL  L  +++ +    P  F+ E  ++S  + LS
Sbjct: 479 LLLLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLS 538

Query: 686 TSQIPQSQIRMFDPEQHPNHLGAGGGFGPVADDGYGVSYMIAGENTIFFHISSKFSSSET 745
           TSQ+P +   MF              +GPV  +GYG  Y    E TI F ISS  S  ET
Sbjct: 539 TSQVP-TTTEMF------------CCYGPVVPNGYGACYNPQPE-TILFCISSFHSCKET 584

Query: 746 NAQRFGNHIRKALLDIADL 764
           ++ +F   + ++L+D+ DL
Sbjct: 585 SSSKFAKAVEESLIDMRDL 603


>gi|188595684 choline acetyltransferase isoform 1 [Homo sapiens]
          Length = 630

 Score =  246 bits (628), Expect = 6e-65
 Identities = 192/619 (31%), Positives = 306/619 (49%), Gaps = 45/619 (7%)

Query: 168 SFQTSLPKLPVPRVSATIQRYLESVRPLLDDEEYYRMELLAKEF--QDKTAPRLQKYLVL 225
           S ++ LPKLPVP +  T+  YL+ +R L+ +E++ + + + ++F         LQ+ L+ 
Sbjct: 8   SEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGETLQQKLLE 67

Query: 226 KSWWASNYVSDWWEEYIYLRGRSPLMVNSNYYVMDLVL-IKNTDVQAARLGNIIHAMIMY 284
           +    +N+VS++W   +YL  R  L VNS+  V+        TD Q     ++I  ++ Y
Sbjct: 68  RQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASLISGVLSY 127

Query: 285 RRKLDREEIKPVMALGIV---PMCSYQMERMFNTTRIPG--KDTDVLQHLS---DSRHVA 336
           +  LD   I    A G +   P+C  Q   +F++ R+PG  +DT V Q+ S   +  HV 
Sbjct: 128 KALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIMPEPEHVI 187

Query: 337 VYHKGRFFKLWLYEGARLLKPQDLEMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQAR 396
           V    +FF L +    R L   DL  Q ++I+   S        +  LT+ GR EWA+AR
Sbjct: 188 VACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWAEAR 247

Query: 397 QAFFSSGKNKAALEAIERAAFFVALDEESYSYDPEDEASLSLYGKALLHGNCY-----NR 451
                   N+ +L+ IER    V LD        +   +L L     LHG  Y     NR
Sbjct: 248 TVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQL-----LHGGGYSKNGANR 302

Query: 452 WFDKSFTLISFKNGQLGLNAEHAWADAPIIGHLWEFVLGTDSFHLGYTETGHCLGKPNPA 511
           W+DKS   +  ++G  G+  EH+  D  ++    E +L     H+  +            
Sbjct: 303 WYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLK----HMTQSSRKLIRADSVSE 358

Query: 512 LAPPTRLQWDIPKQCQAVIESSYQVAKALADDVELYCFQFLPFGKGLIKKCRTSPDAFVQ 571
           L  P RL+W    + Q  + SS +  + +  +++   ++F  +GK  IKK + SPDAF+Q
Sbjct: 359 LPAPRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQ 418

Query: 572 IALQLAHFRDRGKFCLTYEASMTRMFREGRTETVRSCTSESTAFVQAMME-GSHTKADLR 630
           +ALQLA +R   +   TYE++  R F+EGR + +RS T E+ AFV+A+ +  +   A  +
Sbjct: 419 VALQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEK 478

Query: 631 DLFQKAAKKHQNMYR-LAMTGAGIDRHLFCLYLVSKYLGVSSP--FLAE--VLSEPWRLS 685
            L  K A + Q  Y  +A+TG  ID HL  L  +++ +    P  F+ E  ++S  + LS
Sbjct: 479 LLLLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLS 538

Query: 686 TSQIPQSQIRMFDPEQHPNHLGAGGGFGPVADDGYGVSYMIAGENTIFFHISSKFSSSET 745
           TSQ+P +   MF              +GPV  +GYG  Y    E TI F ISS  S  ET
Sbjct: 539 TSQVP-TTTEMF------------CCYGPVVPNGYGACYNPQPE-TILFCISSFHSCKET 584

Query: 746 NAQRFGNHIRKALLDIADL 764
           ++ +F   + ++L+D+ DL
Sbjct: 585 SSSKFAKAVEESLIDMRDL 603


>gi|188595672 choline acetyltransferase isoform 1 [Homo sapiens]
          Length = 630

 Score =  246 bits (628), Expect = 6e-65
 Identities = 192/619 (31%), Positives = 306/619 (49%), Gaps = 45/619 (7%)

Query: 168 SFQTSLPKLPVPRVSATIQRYLESVRPLLDDEEYYRMELLAKEF--QDKTAPRLQKYLVL 225
           S ++ LPKLPVP +  T+  YL+ +R L+ +E++ + + + ++F         LQ+ L+ 
Sbjct: 8   SEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGETLQQKLLE 67

Query: 226 KSWWASNYVSDWWEEYIYLRGRSPLMVNSNYYVMDLVL-IKNTDVQAARLGNIIHAMIMY 284
           +    +N+VS++W   +YL  R  L VNS+  V+        TD Q     ++I  ++ Y
Sbjct: 68  RQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASLISGVLSY 127

Query: 285 RRKLDREEIKPVMALGIV---PMCSYQMERMFNTTRIPG--KDTDVLQHLS---DSRHVA 336
           +  LD   I    A G +   P+C  Q   +F++ R+PG  +DT V Q+ S   +  HV 
Sbjct: 128 KALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIMPEPEHVI 187

Query: 337 VYHKGRFFKLWLYEGARLLKPQDLEMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQAR 396
           V    +FF L +    R L   DL  Q ++I+   S        +  LT+ GR EWA+AR
Sbjct: 188 VACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWAEAR 247

Query: 397 QAFFSSGKNKAALEAIERAAFFVALDEESYSYDPEDEASLSLYGKALLHGNCY-----NR 451
                   N+ +L+ IER    V LD        +   +L L     LHG  Y     NR
Sbjct: 248 TVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQL-----LHGGGYSKNGANR 302

Query: 452 WFDKSFTLISFKNGQLGLNAEHAWADAPIIGHLWEFVLGTDSFHLGYTETGHCLGKPNPA 511
           W+DKS   +  ++G  G+  EH+  D  ++    E +L     H+  +            
Sbjct: 303 WYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLK----HMTQSSRKLIRADSVSE 358

Query: 512 LAPPTRLQWDIPKQCQAVIESSYQVAKALADDVELYCFQFLPFGKGLIKKCRTSPDAFVQ 571
           L  P RL+W    + Q  + SS +  + +  +++   ++F  +GK  IKK + SPDAF+Q
Sbjct: 359 LPAPRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQ 418

Query: 572 IALQLAHFRDRGKFCLTYEASMTRMFREGRTETVRSCTSESTAFVQAMME-GSHTKADLR 630
           +ALQLA +R   +   TYE++  R F+EGR + +RS T E+ AFV+A+ +  +   A  +
Sbjct: 419 VALQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEK 478

Query: 631 DLFQKAAKKHQNMYR-LAMTGAGIDRHLFCLYLVSKYLGVSSP--FLAE--VLSEPWRLS 685
            L  K A + Q  Y  +A+TG  ID HL  L  +++ +    P  F+ E  ++S  + LS
Sbjct: 479 LLLLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLS 538

Query: 686 TSQIPQSQIRMFDPEQHPNHLGAGGGFGPVADDGYGVSYMIAGENTIFFHISSKFSSSET 745
           TSQ+P +   MF              +GPV  +GYG  Y    E TI F ISS  S  ET
Sbjct: 539 TSQVP-TTTEMF------------CCYGPVVPNGYGACYNPQPE-TILFCISSFHSCKET 584

Query: 746 NAQRFGNHIRKALLDIADL 764
           ++ +F   + ++L+D+ DL
Sbjct: 585 SSSKFAKAVEESLIDMRDL 603


>gi|188595670 choline acetyltransferase isoform 2 [Homo sapiens]
          Length = 748

 Score =  246 bits (628), Expect = 6e-65
 Identities = 192/619 (31%), Positives = 306/619 (49%), Gaps = 45/619 (7%)

Query: 168 SFQTSLPKLPVPRVSATIQRYLESVRPLLDDEEYYRMELLAKEF--QDKTAPRLQKYLVL 225
           S ++ LPKLPVP +  T+  YL+ +R L+ +E++ + + + ++F         LQ+ L+ 
Sbjct: 126 SEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGETLQQKLLE 185

Query: 226 KSWWASNYVSDWWEEYIYLRGRSPLMVNSNYYVMDLVL-IKNTDVQAARLGNIIHAMIMY 284
           +    +N+VS++W   +YL  R  L VNS+  V+        TD Q     ++I  ++ Y
Sbjct: 186 RQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASLISGVLSY 245

Query: 285 RRKLDREEIKPVMALGIV---PMCSYQMERMFNTTRIPG--KDTDVLQHLS---DSRHVA 336
           +  LD   I    A G +   P+C  Q   +F++ R+PG  +DT V Q+ S   +  HV 
Sbjct: 246 KALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIMPEPEHVI 305

Query: 337 VYHKGRFFKLWLYEGARLLKPQDLEMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQAR 396
           V    +FF L +    R L   DL  Q ++I+   S        +  LT+ GR EWA+AR
Sbjct: 306 VACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWAEAR 365

Query: 397 QAFFSSGKNKAALEAIERAAFFVALDEESYSYDPEDEASLSLYGKALLHGNCY-----NR 451
                   N+ +L+ IER    V LD        +   +L L     LHG  Y     NR
Sbjct: 366 TVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQL-----LHGGGYSKNGANR 420

Query: 452 WFDKSFTLISFKNGQLGLNAEHAWADAPIIGHLWEFVLGTDSFHLGYTETGHCLGKPNPA 511
           W+DKS   +  ++G  G+  EH+  D  ++    E +L     H+  +            
Sbjct: 421 WYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLK----HMTQSSRKLIRADSVSE 476

Query: 512 LAPPTRLQWDIPKQCQAVIESSYQVAKALADDVELYCFQFLPFGKGLIKKCRTSPDAFVQ 571
           L  P RL+W    + Q  + SS +  + +  +++   ++F  +GK  IKK + SPDAF+Q
Sbjct: 477 LPAPRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQ 536

Query: 572 IALQLAHFRDRGKFCLTYEASMTRMFREGRTETVRSCTSESTAFVQAMME-GSHTKADLR 630
           +ALQLA +R   +   TYE++  R F+EGR + +RS T E+ AFV+A+ +  +   A  +
Sbjct: 537 VALQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEK 596

Query: 631 DLFQKAAKKHQNMYR-LAMTGAGIDRHLFCLYLVSKYLGVSSP--FLAE--VLSEPWRLS 685
            L  K A + Q  Y  +A+TG  ID HL  L  +++ +    P  F+ E  ++S  + LS
Sbjct: 597 LLLLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLS 656

Query: 686 TSQIPQSQIRMFDPEQHPNHLGAGGGFGPVADDGYGVSYMIAGENTIFFHISSKFSSSET 745
           TSQ+P +   MF              +GPV  +GYG  Y    E TI F ISS  S  ET
Sbjct: 657 TSQVP-TTTEMF------------CCYGPVVPNGYGACYNPQPE-TILFCISSFHSCKET 702

Query: 746 NAQRFGNHIRKALLDIADL 764
           ++ +F   + ++L+D+ DL
Sbjct: 703 SSSKFAKAVEESLIDMRDL 721


>gi|4503023 carnitine O-palmitoyltransferase precursor [Homo
           sapiens]
          Length = 658

 Score =  227 bits (579), Expect = 3e-59
 Identities = 187/645 (28%), Positives = 299/645 (46%), Gaps = 84/645 (13%)

Query: 169 FQTSLPKLPVPRVSATIQRYLESVRPLLDDEEYYRMELLAKEFQDKTAPRLQKYLVL--K 226
           +Q SLP+LP+P++  TI+RYL + +PLL+D ++ + E   K F++     L + LV   K
Sbjct: 45  YQDSLPRLPIPKLEDTIRRYLSAQKPLLNDGQFRKTEQFCKSFENGIGKELHEQLVALDK 104

Query: 227 SWWASNYVSDWWEEYIYLRGRSPLMVNSNYYVM-----------DLVLIKNTDVQAARLG 275
               ++Y+S  W + +YL  R  +++N N ++             L    N  V A R  
Sbjct: 105 QNKHTSYISGPWFD-MYLSARDSVVLNFNPFMAFNPDPKSEYNDQLTRATNMTVSAIRFL 163

Query: 276 NIIHAMIMYRR-------KLDREEIKPVMA-------------LGIVPMCSYQMERMFNT 315
             + A ++          K D    K ++              +   P+   Q  R+FN+
Sbjct: 164 KTLRAGLLEPEVFHLNPAKSDTITFKRLIRFVPSSLSWYGAYLVNAYPLDMSQYFRLFNS 223

Query: 316 TRIPGKDTDVLQHLSDSRHVAVYHKGRFFKL-WLYEGARLLKPQDLEMQFQRILDDPSPP 374
           TR+P    D L     +RH+ V  KG F+    L +   ++ P +++   + IL D SP 
Sbjct: 224 TRLPKPSRDELFTDDKARHLLVLRKGNFYIFDVLDQDGNIVSPSEIQAHLKYILSDSSPA 283

Query: 375 QPGEEKLAALTAGGRVEWAQARQAFFSSGKNKAALEAIERAAFFVALDEESYSYDPEDEA 434
              E  LA LT+  R  WA+ RQ   SSG N+ +L  ++ A F + LD+    +  +D  
Sbjct: 284 P--EFPLAYLTSENRDIWAELRQKLMSSG-NEESLRKVDSAVFCLCLDD----FPIKDLV 336

Query: 435 SLSLYGKALLHGNCYNRWFDKSFTLISFKNGQLGLNAEHAWADAPIIGHLWEFVLGTDSF 494
            LS     +LHG+  NRWFDKSF LI  K+G   ++ EH+W D   +   +  V   DS 
Sbjct: 337 HLS---HNMLHGDGTNRWFDKSFNLIIAKDGSTAVHFEHSWGDGVAVLRFFNEVF-KDS- 391

Query: 495 HLGYTETGHCLGKPNPALAPPT----RLQWDIPKQCQAVIESSYQVAKALADDVELYCFQ 550
               T+T     +  PA    T    +L +++    +  I ++ +   A    + + C Q
Sbjct: 392 ----TQTPAVTPQSQPATTDSTVTVQKLNFELTDALKTGITAAKEKFDATMKTLTIDCVQ 447

Query: 551 FLPFGKGLIKKCRTSPDAFVQIALQLAHFRDRGKFCLTYEASMTRMFREGRTETVRSCTS 610
           F   GK  +KK + SPDA  Q+A Q+A  R  G+   TYE+  T  F+ GRTET+R  + 
Sbjct: 448 FQRGGKEFLKKQKLSPDAVAQLAFQMAFLRQYGQTVATYESCSTAAFKHGRTETIRPASV 507

Query: 611 ESTAFVQAMME--GSHTKADLRDLFQKAAKKHQNMYRLAMTGAGIDRHLFCLYLVSKYLG 668
            +    +A +     H+  +L+ +  + +K H  + + A  G G DRHLF L  ++   G
Sbjct: 508 YTKRCSEAFVREPSRHSAGELQQMMVECSKYHGQLTKEAAMGQGFDRHLFALRHLAAAKG 567

Query: 669 VSSPFLAEVLSEPWR-------LSTSQIPQSQIRMFDPEQHPNHLGAGGGFGPVADDGYG 721
           +    L E+  +P         LSTS +    + +             GGF PV  DG+G
Sbjct: 568 I---ILPELYLDPAYGQINHNVLSTSTLSSPAVNL-------------GGFAPVVSDGFG 611

Query: 722 VSYMIAGENTIFFHISSKFSSSETNAQRFGNHIRKALLDIADLFQ 766
           V Y +  +N I  ++S   S    NA+ F   + KAL D+ D  +
Sbjct: 612 VGYAV-HDNWIGCNVS---SYPGRNAREFLQCVEKALEDMFDALE 652


>gi|31542325 peroxisomal carnitine O-octanoyltransferase isoform 2
           [Homo sapiens]
          Length = 612

 Score =  226 bits (576), Expect = 6e-59
 Identities = 181/618 (29%), Positives = 288/618 (46%), Gaps = 55/618 (8%)

Query: 157 RLLSSRHPMLYSFQTSLPKLPVPRVSATIQRYLESVRPLLDDEEYYRMELLAKEFQDKTA 216
           +L  S     + +Q SLP LPVP +  ++++YLESV+P  + EEY + E + ++FQ    
Sbjct: 4   QLAKSTEERTFQYQDSLPSLPVPSLEESLKKYLESVKPFANQEEYKKTEEIVQKFQSGIG 63

Query: 217 PRLQKYLVLKSWWASNYVSDWWEEYIYLRGRSPLMVNSNYYV----MDLVLIKNTDVQAA 272
            +L + L+ ++    N++ +WW    YL  R P  +N N+       +         Q  
Sbjct: 64  EKLHQKLLERAKGKRNWLEEWWLNVAYLDVRIPSQLNVNFAGPAAHFEHYWPPKEGTQLE 123

Query: 273 RLGNIIHAMIMYRRKLDREEIKPVMALGIVPMCSYQMERMFNTTRIPGKDTDVLQHL--- 329
           R    +   + Y + L +E++ PV  +G  P+   Q   +F+T ++PG   D + +    
Sbjct: 124 RGSITLWHNLNYWQLLRKEKV-PVHKVGNTPLDMNQFRMLFSTCKVPGITRDSIMNYFRT 182

Query: 330 -SDSR---HVAVYHKGRFFKLWLYEGARLLKPQDLEMQFQRILDD--PSPPQPGEEKLAA 383
            S+ R   H+ V  +GR F   +     L+ P +L  Q   I       P  PG   +AA
Sbjct: 183 ESEGRSPNHIVVLCRGRAFVFDVIHEGCLVTPPELLRQLTYIHKKCHSEPDGPG---IAA 239

Query: 384 LTAGGRVEWAQARQAFFS-SGKNKAALEAIERAAFFVALDEESYSYDPEDEASLSLYGKA 442
           LT+  R  WA+AR+       +N A LE I+ +    ++++ S    PED + +     A
Sbjct: 240 LTSEERTRWAKAREYLIGLDPENLALLEKIQSSLLVYSMEDSSPHVTPEDYSEIIA---A 296

Query: 443 LLHGNCYNRWFDKSFTLISFKNGQLGLNAEHAWADAPIIGHLWEFVLGTDSFHLGYTETG 502
           +L G+   RW DKS+ LISF NG  G N +HA  DA I+ ++  +V         +   G
Sbjct: 297 ILIGDPTVRWGDKSYNLISFSNGVFGCNCDHAPFDAMIMVNISYYV-----DEKIFQNEG 351

Query: 503 HCLGKPNPALAP-PTRLQWDIPKQCQAVIESSYQVAKALADDVELYCFQFLPFGKGLIKK 561
              G       P P  L + + ++    I  +       A D+++  + F  FGK L K 
Sbjct: 352 RWKGSEKVRDIPLPEELIFIVDEKVLNDINQAKAQYLREASDLQIAAYAFTSFGKKLTKN 411

Query: 562 CRTSPDAFVQIALQLAHFRDRGKFCLTYEASMTRMFREGRTETVRSCTSESTAFVQAMME 621
               PD F+Q+ALQLA++R  G     YE +MTR F  GRTET+RSCT E+  + Q+M +
Sbjct: 412 KMLHPDTFIQLALQLAYYRLHGHPGCCYETAMTRHFYHGRTETMRSCTVEAVRWCQSMQD 471

Query: 622 GSHTKADLRDLFQKAAKKHQNMYRLAMTGAGIDRHLFCLYLVSKYLGVSSPFLAEVLSEP 681
            S    + +    +A  KH  M +    G G DRHL  L L++K  G+  P   E+ ++P
Sbjct: 472 PSVNLRERQQKMLQAFAKHNKMMKDCSAGKGFDRHLLGLLLIAKEEGLPVP---ELFTDP 528

Query: 682 ----------WRLSTSQIPQSQIRMFDPEQHPNHLGAGGGFGPVADDGYGVSYMIAGENT 731
                     + LSTS +               +L   G   P+  +GYG  Y I  +  
Sbjct: 529 LFSKSGGGGNFVLSTSLV--------------GYLRVQGVVVPMVHNGYGFFYHIRDDRF 574

Query: 732 IFFHISSKFSSSETNAQR 749
           +    S+  S  ET+A++
Sbjct: 575 V-VACSAWKSCPETDAEK 591


>gi|221316602 peroxisomal carnitine O-octanoyltransferase isoform 1
           [Homo sapiens]
          Length = 640

 Score =  211 bits (537), Expect = 2e-54
 Identities = 179/644 (27%), Positives = 287/644 (44%), Gaps = 79/644 (12%)

Query: 157 RLLSSRHPMLYSFQTSLPKLPVPRVSATIQRYLES------------------------- 191
           +L  S     + +Q SLP LPVP +  ++++YLES                         
Sbjct: 4   QLAKSTEERTFQYQDSLPSLPVPSLEESLKKYLESVTRTCYQIRGLDPDAKRGFLDLTRE 63

Query: 192 ---VRPLLDDEEYYRMELLAKEFQDKTAPRLQKYLVLKSWWASNYVSDWWEEYIYLRGRS 248
              V+P  + EEY + E + ++FQ     +L + L+ ++    N++ +WW    YL  R 
Sbjct: 64  GIQVKPFANQEEYKKTEEIVQKFQSGIGEKLHQKLLERAKGKRNWLEEWWLNVAYLDVRI 123

Query: 249 PLMVNSNY----YVMDLVLIKNTDVQAARLGNIIHAMIMYRRKLDREEIKPVMALGIVPM 304
           P  +N N+       +         Q  R    +   + Y + L +E++ PV  +G  P+
Sbjct: 124 PSQLNVNFAGPAAHFEHYWPPKEGTQLERGSITLWHNLNYWQLLRKEKV-PVHKVGNTPL 182

Query: 305 CSYQMERMFNTTRIPGKDTDVLQHL----SDSR---HVAVYHKGRFFKLWLYEGARLLKP 357
              Q   +F+T ++PG   D + +     S+ R   H+ V  +GR F   +     L+ P
Sbjct: 183 DMNQFRMLFSTCKVPGITRDSIMNYFRTESEGRSPNHIVVLCRGRAFVFDVIHEGCLVTP 242

Query: 358 QDLEMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQARQAFFS-SGKNKAALEAIERAA 416
            +L  Q   I       +P    +AALT+  R  WA+AR+       +N A LE I+ + 
Sbjct: 243 PELLRQLTYI-HKKCHSEPDGPGIAALTSEERTRWAKAREYLIGLDPENLALLEKIQSSL 301

Query: 417 FFVALDEESYSYDPEDEASLSLYGKALLHGNCYNRWFDKSFTLISFKNGQLGLNAEHAWA 476
              ++++ S    PED + +     A+L G+   RW DKS+ LISF NG  G N +HA  
Sbjct: 302 LVYSMEDSSPHVTPEDYSEII---AAILIGDPTVRWGDKSYNLISFSNGVFGCNCDHAPF 358

Query: 477 DAPIIGHLWEFVLGTDSFHLGYTETGHCLGKPNPALAP-PTRLQWDIPKQCQAVIESSYQ 535
           DA I+ ++  +V         +   G   G       P P  L + + ++    I  +  
Sbjct: 359 DAMIMVNISYYV-----DEKIFQNEGRWKGSEKVRDIPLPEELIFIVDEKVLNDINQAKA 413

Query: 536 VAKALADDVELYCFQFLPFGKGLIKKCRTSPDAFVQIALQLAHFRDRGKFCLTYEASMTR 595
                A D+++  + F  FGK L K     PD F+Q+ALQLA++R  G     YE +MTR
Sbjct: 414 QYLREASDLQIAAYAFTSFGKKLTKNKMLHPDTFIQLALQLAYYRLHGHPGCCYETAMTR 473

Query: 596 MFREGRTETVRSCTSESTAFVQAMMEGSHTKADLRDLFQKAAKKHQNMYRLAMTGAGIDR 655
            F  GRTET+RSCT E+  + Q+M + S    + +    +A  KH  M +    G G DR
Sbjct: 474 HFYHGRTETMRSCTVEAVRWCQSMQDPSVNLRERQQKMLQAFAKHNKMMKDCSAGKGFDR 533

Query: 656 HLFCLYLVSKYLGVSSPFLAEVLSEP----------WRLSTSQIPQSQIRMFDPEQHPNH 705
           HL  L L++K  G+  P   E+ ++P          + LSTS +               +
Sbjct: 534 HLLGLLLIAKEEGLPVP---ELFTDPLFSKSGGGGNFVLSTSLV--------------GY 576

Query: 706 LGAGGGFGPVADDGYGVSYMIAGENTIFFHISSKFSSSETNAQR 749
           L   G   P+  +GYG  Y I  +  +    S+  S  ET+A++
Sbjct: 577 LRVQGVVVPMVHNGYGFFYHIRDDRFV-VACSAWKSCPETDAEK 619


>gi|47131207 solute carrier family 26, member 1 isoform a [Homo
           sapiens]
          Length = 701

 Score = 31.2 bits (69), Expect = 3.8
 Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 2/79 (2%)

Query: 59  PTSWLVVIMATVGSSFCNVDISLGLVSCIQRCLPQGCGPYQTPQTRALLSMAIFSTGVWV 118
           PT  LV+++AT+ S F  +    G  S +   +P G  P Q P+ R +  +A+ +  + +
Sbjct: 293 PTELLVIVVATLVSHFGQLHKRFG--SSVAGDIPTGFMPPQVPEPRLMQRVALDAVALAL 350

Query: 119 TGIFFFRQTLKLLLCYHGW 137
               F     ++    HG+
Sbjct: 351 VAAAFSISLAEMFARSHGY 369


>gi|20336272 solute carrier family 26, member 1 isoform a [Homo
           sapiens]
          Length = 701

 Score = 31.2 bits (69), Expect = 3.8
 Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 2/79 (2%)

Query: 59  PTSWLVVIMATVGSSFCNVDISLGLVSCIQRCLPQGCGPYQTPQTRALLSMAIFSTGVWV 118
           PT  LV+++AT+ S F  +    G  S +   +P G  P Q P+ R +  +A+ +  + +
Sbjct: 293 PTELLVIVVATLVSHFGQLHKRFG--SSVAGDIPTGFMPPQVPEPRLMQRVALDAVALAL 350

Query: 119 TGIFFFRQTLKLLLCYHGW 137
               F     ++    HG+
Sbjct: 351 VAAAFSISLAEMFARSHGY 369


>gi|110618248 mucin and cadherin-like isoform 1 [Homo sapiens]
          Length = 845

 Score = 31.2 bits (69), Expect = 3.8
 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 4/39 (10%)

Query: 681 PWRLSTSQIPQSQIRMFDPEQHPNHLGAGGGFGPVADDG 719
           PW  +TS++P+      +P Q P+   +GGG GP    G
Sbjct: 473 PWTSTTSEVPRPP----EPSQGPSTTSSGGGTGPHPPSG 507


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.137    0.425 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,729,934
Number of Sequences: 37866
Number of extensions: 1335308
Number of successful extensions: 3095
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 2958
Number of HSP's gapped (non-prelim): 29
length of query: 772
length of database: 18,247,518
effective HSP length: 110
effective length of query: 662
effective length of database: 14,082,258
effective search space: 9322454796
effective search space used: 9322454796
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 66 (30.0 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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