Guide to the Human Genome
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Name: LIPJ Sequence: fasta or formatted (366aa) NCBI GI: 231563300
Description:

lipase, family member J

Referenced in:

Lipid Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.4         16           1
 C cysteine            0.5          2           1
 D aspartate           6.3         23           1
 E glutamate           3.3         12           2
 F phenylalanine       5.5         20           2
 G glycine             4.9         18           1
 H histidine           3.0         11           1
 I isoleucine          8.7         32           2
 K lysine              5.7         21           2
 L leucine             9.6         35           2
 M methionine          3.0         11           2
 N asparagine          7.1         26           2
 P proline             3.6         13           1
 Q glutamine           3.3         12           1
 R arginine            2.5          9           1
 S serine              9.0         33           2
 T threonine           6.0         22           2
 V valine              4.4         16           3
 W tryptophan          2.7         10           1
 Y tyrosine            6.6         24           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   lipase, family member J 
LIPK                  0.601   lipase, family member K 
LIPF                  0.583   lipase, gastric precursor 
LIPA                  0.537   lipase A precursor 
LIPA                  0.537   lipase A precursor 
LIPM                  0.501   lipase, family member M 
LIPN                  0.458   lipase-like, ab-hydrolase domain containing 4 [Homo...
KCNB2                 0.010   potassium voltage-gated channel, Shab-related subfam...
PRPF4                 0.010   PRP4 pre-mRNA processing factor 4 homolog 
KCNB1                 0.008   potassium voltage-gated channel, Shab-related subfami...
ITGAE                 0.008   integrin, alpha E precursor 
PSG11                 0.005   pregnancy specific beta-1-glycoprotein 11 isoform 2...
PSG11                 0.005   pregnancy specific beta-1-glycoprotein 11 isoform 2...
PSG11                 0.005   pregnancy specific beta-1-glycoprotein 11 isoform 1...
SPTBN1                0.004   spectrin, beta, non-erythrocytic 1 isoform 2 
SPTBN1                0.004   spectrin, beta, non-erythrocytic 1 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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