Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: LIPN Sequence: fasta or formatted (398aa) NCBI GI: 156447044
Description:

lipase-like, ab-hydrolase domain containing 4

Referenced in:

Lipid Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         26           1
 C cysteine            1.0          4           1
 D aspartate           5.3         21           1
 E glutamate           4.5         18           2
 F phenylalanine       5.8         23           2
 G glycine             6.8         27           2
 H histidine           3.3         13           1
 I isoleucine          6.8         27           3
 K lysine              5.5         22           2
 L leucine             9.0         36           3
 M methionine          4.0         16           2
 N asparagine          6.0         24           2
 P proline             4.5         18           2
 Q glutamine           2.3          9           1
 R arginine            3.3         13           2
 S serine              6.3         25           2
 T threonine           6.5         26           3
 V valine              4.5         18           2
 W tryptophan          3.0         12           1
 Y tyrosine            5.0         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   lipase-like, ab-hydrolase domain containing 4 [Homo... 
LIPA                  0.520   lipase A precursor 
LIPA                  0.520   lipase A precursor 
LIPF                  0.505   lipase, gastric precursor 
LIPK                  0.498   lipase, family member K 
LIPM                  0.491   lipase, family member M 
LIPJ                  0.415   lipase, family member J 
SFRS15                0.007   splicing factor, arginine/serine-rich 15 isoform 3 ...
SFRS15                0.007   splicing factor, arginine/serine-rich 15 isoform 2 ...
SFRS15                0.007   splicing factor, arginine/serine-rich 15 isoform 1 [...
ABHD12                0.006   abhydrolase domain containing 12 isoform a 
ABHD12                0.006   abhydrolase domain containing 12 isoform b 
CD1B                  0.005   CD1B antigen precursor 
C2orf43               0.005   hypothetical protein LOC60526 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press