Search of human proteins with 226061614

Search of human proteins with 226061614

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|226061614 TatD DNase domain containing 3 isoform 4 [Homo
sapiens]
         (253 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|226061614 TatD DNase domain containing 3 isoform 4 [Homo sapi...   501   e-142
gi|110349730 TatD DNase domain containing 3 isoform 1 [Homo sapi...   488   e-138
gi|110349734 TatD DNase domain containing 3 isoform 2 [Homo sapi...   482   e-136
gi|226061853 TatD DNase domain containing 3 isoform 5 [Homo sapi...   481   e-136
gi|226061595 TatD DNase domain containing 3 isoform 3 [Homo sapi...   391   e-109
gi|14042943 TatD DNase domain containing 1 isoform a [Homo sapiens]    48   9e-06
gi|225903439 TatD DNase domain containing 1 isoform b [Homo sapi...    43   3e-04
gi|225903424 TatD DNase domain containing 2 [Homo sapiens]             42   4e-04
gi|47419930 chondroitin sulfate proteoglycan 4 [Homo sapiens]          31   1.2  
gi|32698724 patatin-like phospholipase domain containing 2 [Homo...    30   2.0  
gi|148806891 hypothetical protein LOC54906 [Homo sapiens]              30   2.6  
gi|103472001 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex,...    29   4.5  
gi|52485853 integrin, alpha 11 precursor [Homo sapiens]                28   5.9  
gi|134254462 ribosomal modification protein rimK-like family mem...    28   5.9  
gi|7661952 squamous cell carcinoma antigen recognized by T cells...    28   7.7  
gi|222418558 methylenetetrahydrofolate dehydrogenase 2-like [Hom...    28   7.7  

>gi|226061614 TatD DNase domain containing 3 isoform 4 [Homo
           sapiens]
          Length = 253

 Score =  501 bits (1289), Expect = e-142
 Identities = 253/253 (100%), Positives = 253/253 (100%)

Query: 1   MRAAGVGLVDCHCHLSAPDFDRDLDDVLEKAKKANVVALVAVAEHSGEFEKIMQLSERYN 60
           MRAAGVGLVDCHCHLSAPDFDRDLDDVLEKAKKANVVALVAVAEHSGEFEKIMQLSERYN
Sbjct: 1   MRAAGVGLVDCHCHLSAPDFDRDLDDVLEKAKKANVVALVAVAEHSGEFEKIMQLSERYN 60

Query: 61  GFVLPCLGVHPVQGLPPEDQRSVTLKVGLDFSPRFAGTGEQKEEQRQVLIRQIQLAKRLN 120
           GFVLPCLGVHPVQGLPPEDQRSVTLKVGLDFSPRFAGTGEQKEEQRQVLIRQIQLAKRLN
Sbjct: 61  GFVLPCLGVHPVQGLPPEDQRSVTLKVGLDFSPRFAGTGEQKEEQRQVLIRQIQLAKRLN 120

Query: 121 LPVNVHSRSAGRPTINLLQEQGAEKVLLHAFDGRPSVAMEGVRAGYFFSIPPSIIRSGQK 180
           LPVNVHSRSAGRPTINLLQEQGAEKVLLHAFDGRPSVAMEGVRAGYFFSIPPSIIRSGQK
Sbjct: 121 LPVNVHSRSAGRPTINLLQEQGAEKVLLHAFDGRPSVAMEGVRAGYFFSIPPSIIRSGQK 180

Query: 181 QKLVKQLPLTSICLETDSPALGPEKQVRNEPWNISISAEYIAQVKGISVEEVIEVTTQNA 240
           QKLVKQLPLTSICLETDSPALGPEKQVRNEPWNISISAEYIAQVKGISVEEVIEVTTQNA
Sbjct: 181 QKLVKQLPLTSICLETDSPALGPEKQVRNEPWNISISAEYIAQVKGISVEEVIEVTTQNA 240

Query: 241 LKLFPKLRHLLQK 253
           LKLFPKLRHLLQK
Sbjct: 241 LKLFPKLRHLLQK 253


>gi|110349730 TatD DNase domain containing 3 isoform 1 [Homo
           sapiens]
          Length = 274

 Score =  488 bits (1257), Expect = e-138
 Identities = 253/274 (92%), Positives = 253/274 (92%), Gaps = 21/274 (7%)

Query: 1   MRAAGVGLVDCHCHLSAPDFDRDLDDVLEKAKKANVVALVAVAEHSGEFEKIMQLSERYN 60
           MRAAGVGLVDCHCHLSAPDFDRDLDDVLEKAKKANVVALVAVAEHSGEFEKIMQLSERYN
Sbjct: 1   MRAAGVGLVDCHCHLSAPDFDRDLDDVLEKAKKANVVALVAVAEHSGEFEKIMQLSERYN 60

Query: 61  GFVLPCLGVHPVQGLPPEDQRSVTLK---------------------VGLDFSPRFAGTG 99
           GFVLPCLGVHPVQGLPPEDQRSVTLK                     VGLDFSPRFAGTG
Sbjct: 61  GFVLPCLGVHPVQGLPPEDQRSVTLKDLDVALPIIENYKDRLLAIGEVGLDFSPRFAGTG 120

Query: 100 EQKEEQRQVLIRQIQLAKRLNLPVNVHSRSAGRPTINLLQEQGAEKVLLHAFDGRPSVAM 159
           EQKEEQRQVLIRQIQLAKRLNLPVNVHSRSAGRPTINLLQEQGAEKVLLHAFDGRPSVAM
Sbjct: 121 EQKEEQRQVLIRQIQLAKRLNLPVNVHSRSAGRPTINLLQEQGAEKVLLHAFDGRPSVAM 180

Query: 160 EGVRAGYFFSIPPSIIRSGQKQKLVKQLPLTSICLETDSPALGPEKQVRNEPWNISISAE 219
           EGVRAGYFFSIPPSIIRSGQKQKLVKQLPLTSICLETDSPALGPEKQVRNEPWNISISAE
Sbjct: 181 EGVRAGYFFSIPPSIIRSGQKQKLVKQLPLTSICLETDSPALGPEKQVRNEPWNISISAE 240

Query: 220 YIAQVKGISVEEVIEVTTQNALKLFPKLRHLLQK 253
           YIAQVKGISVEEVIEVTTQNALKLFPKLRHLLQK
Sbjct: 241 YIAQVKGISVEEVIEVTTQNALKLFPKLRHLLQK 274


>gi|110349734 TatD DNase domain containing 3 isoform 2 [Homo
           sapiens]
          Length = 273

 Score =  482 bits (1240), Expect = e-136
 Identities = 252/274 (91%), Positives = 252/274 (91%), Gaps = 22/274 (8%)

Query: 1   MRAAGVGLVDCHCHLSAPDFDRDLDDVLEKAKKANVVALVAVAEHSGEFEKIMQLSERYN 60
           MRAAGVGLVDCHCHLSAPDFDRDLDDVLEKAKKANVVALVAVAEHSGEFEKIMQLSERYN
Sbjct: 1   MRAAGVGLVDCHCHLSAPDFDRDLDDVLEKAKKANVVALVAVAEHSGEFEKIMQLSERYN 60

Query: 61  GFVLPCLGVHPVQGLPPEDQRSVTLK---------------------VGLDFSPRFAGTG 99
           GFVLPCLGVHPVQGLPPEDQRSVTLK                     VGLDFSPRFAGTG
Sbjct: 61  GFVLPCLGVHPVQGLPPEDQRSVTLKDLDVALPIIENYKDRLLAIGEVGLDFSPRFAGTG 120

Query: 100 EQKEEQRQVLIRQIQLAKRLNLPVNVHSRSAGRPTINLLQEQGAEKVLLHAFDGRPSVAM 159
           EQKEEQRQVLIRQIQLAKRLNLPVNVHSRSAGRPTINLLQEQGAEKVLLHAFDGRPSVAM
Sbjct: 121 EQKEEQRQVLIRQIQLAKRLNLPVNVHSRSAGRPTINLLQEQGAEKVLLHAFDGRPSVAM 180

Query: 160 EGVRAGYFFSIPPSIIRSGQKQKLVKQLPLTSICLETDSPALGPEKQVRNEPWNISISAE 219
           EGVRAGYFFSIPPSIIRSGQ QKLVKQLPLTSICLETDSPALGPEKQVRNEPWNISISAE
Sbjct: 181 EGVRAGYFFSIPPSIIRSGQ-QKLVKQLPLTSICLETDSPALGPEKQVRNEPWNISISAE 239

Query: 220 YIAQVKGISVEEVIEVTTQNALKLFPKLRHLLQK 253
           YIAQVKGISVEEVIEVTTQNALKLFPKLRHLLQK
Sbjct: 240 YIAQVKGISVEEVIEVTTQNALKLFPKLRHLLQK 273


>gi|226061853 TatD DNase domain containing 3 isoform 5 [Homo
           sapiens]
          Length = 281

 Score =  481 bits (1239), Expect = e-136
 Identities = 253/281 (90%), Positives = 253/281 (90%), Gaps = 28/281 (9%)

Query: 1   MRAAGVGLVDCHCHLSAPDFDRDLDDVLEKAKKANVVALVAVAEHSGEFEKIMQLSERYN 60
           MRAAGVGLVDCHCHLSAPDFDRDLDDVLEKAKKANVVALVAVAEHSGEFEKIMQLSERYN
Sbjct: 1   MRAAGVGLVDCHCHLSAPDFDRDLDDVLEKAKKANVVALVAVAEHSGEFEKIMQLSERYN 60

Query: 61  GFVLPCLGVHPVQGLPPEDQRSVTLK---------------------VGLDFSPRFAGTG 99
           GFVLPCLGVHPVQGLPPEDQRSVTLK                     VGLDFSPRFAGTG
Sbjct: 61  GFVLPCLGVHPVQGLPPEDQRSVTLKDLDVALPIIENYKDRLLAIGEVGLDFSPRFAGTG 120

Query: 100 EQKEEQRQVLIRQIQLAKRLNLPVNVHSRSAGRPTINLLQEQGAEKVLLHAFDGRPSVAM 159
           EQKEEQRQVLIRQIQLAKRLNLPVNVHSRSAGRPTINLLQEQGAEKVLLHAFDGRPSVAM
Sbjct: 121 EQKEEQRQVLIRQIQLAKRLNLPVNVHSRSAGRPTINLLQEQGAEKVLLHAFDGRPSVAM 180

Query: 160 EGVRAGYFFSIPPSIIRSGQ-------KQKLVKQLPLTSICLETDSPALGPEKQVRNEPW 212
           EGVRAGYFFSIPPSIIRSGQ       KQKLVKQLPLTSICLETDSPALGPEKQVRNEPW
Sbjct: 181 EGVRAGYFFSIPPSIIRSGQLLSLFSKKQKLVKQLPLTSICLETDSPALGPEKQVRNEPW 240

Query: 213 NISISAEYIAQVKGISVEEVIEVTTQNALKLFPKLRHLLQK 253
           NISISAEYIAQVKGISVEEVIEVTTQNALKLFPKLRHLLQK
Sbjct: 241 NISISAEYIAQVKGISVEEVIEVTTQNALKLFPKLRHLLQK 281


>gi|226061595 TatD DNase domain containing 3 isoform 3 [Homo
           sapiens]
          Length = 240

 Score =  391 bits (1005), Expect = e-109
 Identities = 206/234 (88%), Positives = 206/234 (88%), Gaps = 28/234 (11%)

Query: 1   MRAAGVGLVDCHCHLSAPDFDRDLDDVLEKAKKANVVALVAVAEHSGEFEKIMQLSERYN 60
           MRAAGVGLVDCHCHLSAPDFDRDLDDVLEKAKKANVVALVAVAEHSGEFEKIMQLSERYN
Sbjct: 1   MRAAGVGLVDCHCHLSAPDFDRDLDDVLEKAKKANVVALVAVAEHSGEFEKIMQLSERYN 60

Query: 61  GFVLPCLGVHPVQGLPPEDQRSVTLK---------------------VGLDFSPRFAGTG 99
           GFVLPCLGVHPVQGLPPEDQRSVTLK                     VGLDFSPRFAGTG
Sbjct: 61  GFVLPCLGVHPVQGLPPEDQRSVTLKDLDVALPIIENYKDRLLAIGEVGLDFSPRFAGTG 120

Query: 100 EQKEEQRQVLIRQIQLAKRLNLPVNVHSRSAGRPTINLLQEQGAEKVLLHAFDGRPSVAM 159
           EQKEEQRQVLIRQIQLAKRLNLPVNVHSRSAGRPTINLLQEQGAEKVLLHAFDGRPSVAM
Sbjct: 121 EQKEEQRQVLIRQIQLAKRLNLPVNVHSRSAGRPTINLLQEQGAEKVLLHAFDGRPSVAM 180

Query: 160 EGVRAGYFFSIPPSIIRSGQ-------KQKLVKQLPLTSICLETDSPALGPEKQ 206
           EGVRAGYFFSIPPSIIRSGQ       KQKLVKQLPLTSICLETDSPALGPEKQ
Sbjct: 181 EGVRAGYFFSIPPSIIRSGQLLSLFSKKQKLVKQLPLTSICLETDSPALGPEKQ 234


>gi|14042943 TatD DNase domain containing 1 isoform a [Homo sapiens]
          Length = 297

 Score = 47.8 bits (112), Expect = 9e-06
 Identities = 53/264 (20%), Positives = 109/264 (41%), Gaps = 43/264 (16%)

Query: 23  DLDDVLEKAKKANVVALVAVAEHSGEFEKIMQLSERYNGFVLPCLGVHPVQ-GLPPEDQR 81
           DL DV+ +A +  V   +    +  + +  + L++  NG     +G HP + G   ++  
Sbjct: 31  DLQDVIGRAVEIGVKKFMITGGNLQDSKDALHLAQT-NGMFFSTVGCHPTRCGEFEKNNP 89

Query: 82  SVTLKVGLDFSPRFAGT----GE-----------QKEEQRQVLIRQIQLAKRLNLPVNVH 126
            + LK  L+ +    G     GE            K+ Q +   +Q +L+++  LP+ +H
Sbjct: 90  DLYLKELLNLAENNKGKVVAIGECGLDFDRLQFCPKDTQLKYFEKQFELSEQTKLPMFLH 149

Query: 127 SRSAGRPTINLLQEQGAEKV--LLHAFDGRPSVAMEGVRAGYFFSIPPSIIRSGQKQKLV 184
            R++    +++++      V  ++H+FDG    A   +    +       +++    +++
Sbjct: 150 CRNSHAEFLDIMKRNRDRCVGGVVHSFDGTKEAAAALIDLDLYIGFNGCSLKTEANLEVL 209

Query: 185 KQLPLTSICLETDSPALG---------------PEKQV---------RNEPWNISISAEY 220
           K +P   + +ETD+P  G               P K+          RNEP +I    E 
Sbjct: 210 KSIPSEKLMIETDAPWCGVKSTHAGSKYIRTAFPTKKKWESGHCLKDRNEPCHIIQILEI 269

Query: 221 IAQVKGISVEEVIEVTTQNALKLF 244
           ++ V+     E+      N +K+F
Sbjct: 270 MSAVRDEDPLELANTLYNNTIKVF 293


>gi|225903439 TatD DNase domain containing 1 isoform b [Homo
           sapiens]
          Length = 250

 Score = 42.7 bits (99), Expect = 3e-04
 Identities = 34/169 (20%), Positives = 73/169 (43%), Gaps = 26/169 (15%)

Query: 102 KEEQRQVLIRQIQLAKRLNLPVNVHSRSAGRPTINLLQEQGAEKV--LLHAFDGRPSVAM 159
           K+ Q +   +Q +L+++  LP+ +H R++    +++++      V  ++H+FDG    A 
Sbjct: 78  KDTQLKYFEKQFELSEQTKLPMFLHCRNSHAEFLDIMKRNRDRCVGGVVHSFDGTKEAAA 137

Query: 160 EGVRAGYFFSIPPSIIRSGQKQKLVKQLPLTSICLETDSPALG---------------PE 204
             +    +       +++    +++K +P   + +ETD+P  G               P 
Sbjct: 138 ALIDLDLYIGFNGCSLKTEANLEVLKSIPSEKLMIETDAPWCGVKSTHAGSKYIRTAFPT 197

Query: 205 KQV---------RNEPWNISISAEYIAQVKGISVEEVIEVTTQNALKLF 244
           K+          RNEP +I    E ++ V+     E+      N +K+F
Sbjct: 198 KKKWESGHCLKDRNEPCHIIQILEIMSAVRDEDPLELANTLYNNTIKVF 246


>gi|225903424 TatD DNase domain containing 2 [Homo sapiens]
          Length = 761

 Score = 42.4 bits (98), Expect = 4e-04
 Identities = 41/172 (23%), Positives = 78/172 (45%), Gaps = 18/172 (10%)

Query: 86  KVGLDFSPRFAGTGEQKEEQRQVLIRQIQLAKRLNLPVNVHSRSAGRPTINLLQE--QGA 143
           ++GLD+S +         EQ +V  RQ+QLA  L  P+ +H R A    + ++++     
Sbjct: 593 EMGLDYSYKCT---TPVPEQHKVFERQLQLAVSLKKPLVIHCREADEDLLEIMKKFVPPD 649

Query: 144 EKVLLHAFDGRPSVAMEGVRAGYF------FSIPPSIIRSGQKQKLVKQLPLTSICLETD 197
            K+  H F G   V    ++  YF      F+   +   + + ++ ++Q+PL  I +ETD
Sbjct: 650 YKIHRHCFTGSYPVIEPLLK--YFPNMSVGFTAVLTYSSAWEAREALRQIPLERIIVETD 707

Query: 198 SPALGPEKQVRN-----EPWNISISAEYIAQVKGISVEEVIEVTTQNALKLF 244
           +P   P +  ++      P     +   IA+VK   +   +    +N  +L+
Sbjct: 708 APYFLPRQVPKSLCQYAHPGLALHTVREIARVKDQPLSLTLAALRENTSRLY 759


>gi|47419930 chondroitin sulfate proteoglycan 4 [Homo sapiens]
          Length = 2322

 Score = 30.8 bits (68), Expect = 1.2
 Identities = 24/77 (31%), Positives = 33/77 (42%), Gaps = 2/77 (2%)

Query: 77   PEDQRSVTLKVGLDFSPRFAGTGEQKEEQRQVLIRQIQLAKRLNLPVNVHSRSAGRPTIN 136
            PE QR+      LD S   A     +  +  VL +  Q   R  L V+     AG+P  +
Sbjct: 1716 PEGQRARITVAALDASNLLASVPSPQRSEHDVLFQVTQFPSRGQLLVSEEPLHAGQP--H 1773

Query: 137  LLQEQGAEKVLLHAFDG 153
             LQ Q A   L++A  G
Sbjct: 1774 FLQSQLAAGQLVYAHGG 1790


>gi|32698724 patatin-like phospholipase domain containing 2 [Homo
           sapiens]
          Length = 504

 Score = 30.0 bits (66), Expect = 2.0
 Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 4/58 (6%)

Query: 121 LPVNVHSRSAGRPTINLLQEQGAEKVLLHAFDGRPSVAMEGVRAG----YFFSIPPSI 174
           LP + H  ++GR  I+L +    E V++  F+ +  +    V +G    Y   IPPS+
Sbjct: 102 LPADSHEHASGRLGISLTRVSDGENVIISHFNSKDELIQANVCSGFIPVYCGLIPPSL 159


>gi|148806891 hypothetical protein LOC54906 [Homo sapiens]
          Length = 2430

 Score = 29.6 bits (65), Expect = 2.6
 Identities = 28/134 (20%), Positives = 52/134 (38%), Gaps = 21/134 (15%)

Query: 95   FAGTGEQKEEQRQVLIRQIQLAKRLNLPVNVHSRSAGRPTI------NLLQEQGAEKVLL 148
            F G      +     ++Q+Q++  + L +  H    GRPT+       ++  +  E +  
Sbjct: 1455 FVGPTHPVGQDNFTQVQQMQVSAEMPLILTDHPGRTGRPTLPGKVTEEIVSSEHDEGL-- 1512

Query: 149  HAFDGRPSV--------AMEGVRAGYFFSIPPSIIRSGQKQKLV----KQLPLTSICLET 196
             +F G+           A      G F   P  +++SG   + V    + L L  + LE+
Sbjct: 1513 -SFSGKVQCYGRELNQPASAAKCTGDFSPSPEKLVKSGNPLQPVSIENRNLDLKHLVLES 1571

Query: 197  DSPALGPEKQVRNE 210
              P  GP   + N+
Sbjct: 1572 SEPPFGPRNVIENK 1585


>gi|103472001 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7,
           14.5kDa [Homo sapiens]
          Length = 113

 Score = 28.9 bits (63), Expect = 4.5
 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 2/59 (3%)

Query: 163 RAGYFFSIPPSIIRSGQKQKLVKQLPLTSICLETDSPALGPEKQVRNEPWNISISAEYI 221
           R G   S+PPSII S QK  +  +   +S    T+  A+ P   ++   W +S    Y+
Sbjct: 57  RDGRRESVPPSIIMSSQKALVSGKPAESSAVAATEKKAVTPAPPIKR--WELSSDQPYL 113


>gi|52485853 integrin, alpha 11 precursor [Homo sapiens]
          Length = 1188

 Score = 28.5 bits (62), Expect = 5.9
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)

Query: 31  AKKANVVALVAVAEHSGEFEKIMQLSERYN--GFVLPCLGVHPVQGLPPE 78
           AKK  +V     +  S + EK++Q SER N   + +  LG +  +G+ PE
Sbjct: 262 AKKVMIVITDGESHDSPDLEKVIQQSERDNVTRYAVAVLGYYNRRGINPE 311


>gi|134254462 ribosomal modification protein rimK-like family member
           B [Homo sapiens]
          Length = 386

 Score = 28.5 bits (62), Expect = 5.9
 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 4/54 (7%)

Query: 150 AFDGRPSVAMEGVRAGYFFSIPPSIIRSGQKQKLVKQLPLTSICLETDSPALGP 203
           AFD   ++ + G+ A Y  S+ PS    G+  + +  L + S   ET  P LGP
Sbjct: 286 AFDKACNLDVAGIIADYAASLLPS----GRLTRRMSLLSVVSTASETSEPELGP 335


>gi|7661952 squamous cell carcinoma antigen recognized by T cells 3
           [Homo sapiens]
          Length = 963

 Score = 28.1 bits (61), Expect = 7.7
 Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 7/62 (11%)

Query: 181 QKLVKQLPLTSICLETDSPALGPEKQVRNEPWNISISAEYIAQVKGISVE-EVIEVTTQN 239
           Q L +QL +  + L   + A      +RN PW +++ + Y+  ++   V+ +VI VT + 
Sbjct: 352 QYLDRQLKVKDLVLSVHNRA------IRNCPWTVALWSRYLLAMERHGVDHQVISVTFEK 405

Query: 240 AL 241
           AL
Sbjct: 406 AL 407


>gi|222418558 methylenetetrahydrofolate dehydrogenase 2-like [Homo
           sapiens]
          Length = 347

 Score = 28.1 bits (61), Expect = 7.7
 Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 7/67 (10%)

Query: 188 PLTSICLETDSPALGPEKQVRNE---PWNISISAEYIAQVKGISVEEVIEVTTQNALKLF 244
           P  SI L  D+PA      VRN+      + I +E I + K +S EE+++VT Q  L + 
Sbjct: 82  PHLSIILVGDNPA--SHTYVRNKIRAASAVGICSELILKPKDVSQEELLDVTDQ--LNMD 137

Query: 245 PKLRHLL 251
           P++  +L
Sbjct: 138 PRVSGIL 144


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.136    0.390 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,389,364
Number of Sequences: 37866
Number of extensions: 411023
Number of successful extensions: 1159
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1138
Number of HSP's gapped (non-prelim): 17
length of query: 253
length of database: 18,247,518
effective HSP length: 100
effective length of query: 153
effective length of database: 14,460,918
effective search space: 2212520454
effective search space used: 2212520454
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.