Guide to the Human Genome
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Search of human proteins with 223468600

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|223468600 leishmanolysin-like isoform 1 [Homo sapiens]
         (692 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|223468600 leishmanolysin-like isoform 1 [Homo sapiens]            1461   0.0  
gi|110556638 leishmanolysin-like isoform 2 [Homo sapiens]            1359   0.0  
gi|239755922 PREDICTED: similar to Uncharacterized protein FLJ42...    34   0.40 
gi|239750440 PREDICTED: hypothetical protein XP_002347362 [Homo ...    34   0.40 
gi|239744742 PREDICTED: hypothetical protein XP_002343249 [Homo ...    34   0.40 
gi|16554449 zonadhesin isoform 3 [Homo sapiens]                        33   0.68 
gi|27881494 zonadhesin isoform 6 [Homo sapiens]                        33   0.68 
gi|239753327 PREDICTED: zinc finger protein 806 [Homo sapiens]         33   1.2  
gi|239747893 PREDICTED: zinc finger protein 806 [Homo sapiens]         33   1.2  
gi|239741794 PREDICTED: zinc finger protein 806 [Homo sapiens]         33   1.2  
gi|56682964 legumain preproprotein [Homo sapiens]                      33   1.2  
gi|56682962 legumain preproprotein [Homo sapiens]                      33   1.2  
gi|40018644 hypothetical protein LOC55668 isoform 2 [Homo sapiens]     32   2.0  
gi|40018646 hypothetical protein LOC55668 isoform 1 [Homo sapiens]     32   2.0  
gi|197304721 cytochrome b-561 domain containing 1 isoform 1 [Hom...    31   3.4  
gi|48762934 alpha 2 type I collagen [Homo sapiens]                     30   5.7  
gi|119964721 fer (fps/fes related) tyrosine kinase [Homo sapiens]      30   5.7  
gi|153251823 stromal protein associated with thymii and lymph no...    30   9.8  
gi|211971038 tousled-like kinase 1 isoform 3 [Homo sapiens]            30   9.8  
gi|211971036 tousled-like kinase 1 isoform 2 [Homo sapiens]            30   9.8  
gi|33636698 tousled-like kinase 1 isoform 1 [Homo sapiens]             30   9.8  

>gi|223468600 leishmanolysin-like isoform 1 [Homo sapiens]
          Length = 692

 Score = 1461 bits (3783), Expect = 0.0
 Identities = 692/692 (100%), Positives = 692/692 (100%)

Query: 1   MVTTLGPKMAAEWGGGVGYSGSGPGRSRWRWSGSVWVRSVLLLLGGLRASATSTPVSLGS 60
           MVTTLGPKMAAEWGGGVGYSGSGPGRSRWRWSGSVWVRSVLLLLGGLRASATSTPVSLGS
Sbjct: 1   MVTTLGPKMAAEWGGGVGYSGSGPGRSRWRWSGSVWVRSVLLLLGGLRASATSTPVSLGS 60

Query: 61  SPPCRHHVPSDTEVINKVHLKANHVVKRDVDEHLRIKTVYDKSVEELLPEKKNLVKNKLF 120
           SPPCRHHVPSDTEVINKVHLKANHVVKRDVDEHLRIKTVYDKSVEELLPEKKNLVKNKLF
Sbjct: 61  SPPCRHHVPSDTEVINKVHLKANHVVKRDVDEHLRIKTVYDKSVEELLPEKKNLVKNKLF 120

Query: 121 PQAISYLEKTFQVRRPAGTILLSRQCATNQYLRKENDPHRYCTGECAAHTKCGPVIVPEE 180
           PQAISYLEKTFQVRRPAGTILLSRQCATNQYLRKENDPHRYCTGECAAHTKCGPVIVPEE
Sbjct: 121 PQAISYLEKTFQVRRPAGTILLSRQCATNQYLRKENDPHRYCTGECAAHTKCGPVIVPEE 180

Query: 181 HLQQCRVYRGGKWPHGAVGVPDQEGISDADFVLYVGALATERCSHENIISYAAYCQQEAN 240
           HLQQCRVYRGGKWPHGAVGVPDQEGISDADFVLYVGALATERCSHENIISYAAYCQQEAN
Sbjct: 181 HLQQCRVYRGGKWPHGAVGVPDQEGISDADFVLYVGALATERCSHENIISYAAYCQQEAN 240

Query: 241 MDRPIAGYANLCPNMISTQPQEFVGMLSTVKHEVIHALGFSAGLFAFYHDKDGNPLTSRF 300
           MDRPIAGYANLCPNMISTQPQEFVGMLSTVKHEVIHALGFSAGLFAFYHDKDGNPLTSRF
Sbjct: 241 MDRPIAGYANLCPNMISTQPQEFVGMLSTVKHEVIHALGFSAGLFAFYHDKDGNPLTSRF 300

Query: 301 ADGLPPFNYSLGLYQWSDKVVRKVERLWDVRDNKIVRHTVYLLVTPRVVEEARKHFDCPV 360
           ADGLPPFNYSLGLYQWSDKVVRKVERLWDVRDNKIVRHTVYLLVTPRVVEEARKHFDCPV
Sbjct: 301 ADGLPPFNYSLGLYQWSDKVVRKVERLWDVRDNKIVRHTVYLLVTPRVVEEARKHFDCPV 360

Query: 361 LEGMELENQGGVGTELNHWEKRLLENEAMTGSHTQNRVLSRITLALMEDTGWYKANYSMA 420
           LEGMELENQGGVGTELNHWEKRLLENEAMTGSHTQNRVLSRITLALMEDTGWYKANYSMA
Sbjct: 361 LEGMELENQGGVGTELNHWEKRLLENEAMTGSHTQNRVLSRITLALMEDTGWYKANYSMA 420

Query: 421 EKLDWGRGMGCDFVRKSCKFWIDQQRQKRQMLSPYCDTLRSNPLQLTCRQDQRAVAVCNL 480
           EKLDWGRGMGCDFVRKSCKFWIDQQRQKRQMLSPYCDTLRSNPLQLTCRQDQRAVAVCNL
Sbjct: 421 EKLDWGRGMGCDFVRKSCKFWIDQQRQKRQMLSPYCDTLRSNPLQLTCRQDQRAVAVCNL 480

Query: 481 QKFPKPLPQEYQYFDELSGIPAEDLPYYGGSVEIADYCPFSQEFSWHLSGEYQRSSDCRI 540
           QKFPKPLPQEYQYFDELSGIPAEDLPYYGGSVEIADYCPFSQEFSWHLSGEYQRSSDCRI
Sbjct: 481 QKFPKPLPQEYQYFDELSGIPAEDLPYYGGSVEIADYCPFSQEFSWHLSGEYQRSSDCRI 540

Query: 541 LENQPEIFKNYGAEKYGPHSVCLIQKSAFVMEKCERKLSYPDWGSGCYQVSCSPQGLKVW 600
           LENQPEIFKNYGAEKYGPHSVCLIQKSAFVMEKCERKLSYPDWGSGCYQVSCSPQGLKVW
Sbjct: 541 LENQPEIFKNYGAEKYGPHSVCLIQKSAFVMEKCERKLSYPDWGSGCYQVSCSPQGLKVW 600

Query: 601 VQDTSYLCSRAGQVLPVSIQMNGWIHDGNLLCPSCWDFCELCPPETDPPATNLTRALPLD 660
           VQDTSYLCSRAGQVLPVSIQMNGWIHDGNLLCPSCWDFCELCPPETDPPATNLTRALPLD
Sbjct: 601 VQDTSYLCSRAGQVLPVSIQMNGWIHDGNLLCPSCWDFCELCPPETDPPATNLTRALPLD 660

Query: 661 LCSCSSSLVVTLWLLLGNLFPLLAGFLLCIWH 692
           LCSCSSSLVVTLWLLLGNLFPLLAGFLLCIWH
Sbjct: 661 LCSCSSSLVVTLWLLLGNLFPLLAGFLLCIWH 692


>gi|110556638 leishmanolysin-like isoform 2 [Homo sapiens]
          Length = 655

 Score = 1359 bits (3518), Expect = 0.0
 Identities = 655/692 (94%), Positives = 655/692 (94%), Gaps = 37/692 (5%)

Query: 1   MVTTLGPKMAAEWGGGVGYSGSGPGRSRWRWSGSVWVRSVLLLLGGLRASATSTPVSLGS 60
           MVTTLGPKMAAEWGGGVGYSGSGPGRSRWRWSGSVWVRSVLLLLGGLRASATSTPVSLGS
Sbjct: 1   MVTTLGPKMAAEWGGGVGYSGSGPGRSRWRWSGSVWVRSVLLLLGGLRASATSTPVSLGS 60

Query: 61  SPPCRHHVPSDTEVINKVHLKANHVVKRDVDEHLRIKTVYDKSVEELLPEKKNLVKNKLF 120
           SPPCRHHVPSDTEVINKVHLKANHVVKRDVDEHLRIKTVYDKSVEELLPEKKNLVKNKLF
Sbjct: 61  SPPCRHHVPSDTEVINKVHLKANHVVKRDVDEHLRIKTVYDKSVEELLPEKKNLVKNKLF 120

Query: 121 PQAISYLEKTFQVRRPAGTILLSRQCATNQYLRKENDPHRYCTGECAAHTKCGPVIVPEE 180
           PQAISYLEKTFQVRRPAGTILLSRQCATNQYLRKENDPHRYCTGECAAHTKCGPVIVPEE
Sbjct: 121 PQAISYLEKTFQVRRPAGTILLSRQCATNQYLRKENDPHRYCTGECAAHTKCGPVIVPEE 180

Query: 181 HLQQCRVYRGGKWPHGAVGVPDQEGISDADFVLYVGALATERCSHENIISYAAYCQQEAN 240
           HLQQCRVYRGGKWPHGAVGVPDQEGISDADFVLYVGALATERCSHENIISYAAYCQQEAN
Sbjct: 181 HLQQCRVYRGGKWPHGAVGVPDQEGISDADFVLYVGALATERCSHENIISYAAYCQQEAN 240

Query: 241 MDRPIAGYANLCPNMISTQPQEFVGMLSTVKHEVIHALGFSAGLFAFYHDKDGNPLTSRF 300
           MDRPIAGYANLCPNMISTQPQEFVGMLSTVKHEVIHALGFSAGLFAFYHDKDGNPLTSRF
Sbjct: 241 MDRPIAGYANLCPNMISTQPQEFVGMLSTVKHEVIHALGFSAGLFAFYHDKDGNPLTSRF 300

Query: 301 ADGLPPFNYSLGLYQWSDKVVRKVERLWDVRDNKIVRHTVYLLVTPRVVEEARKHFDCPV 360
           ADGLPPFNYSLGLYQWSDKVVRKVERLWDVRDNKIVRHTVYLLVTPRVVEEARKHFDCPV
Sbjct: 301 ADGLPPFNYSLGLYQWSDKVVRKVERLWDVRDNKIVRHTVYLLVTPRVVEEARKHFDCPV 360

Query: 361 LEGMELENQGGVGTELNHWEKRLLENEAMTGSHTQNRVLSRITLALMEDTGWYKANYSMA 420
           LEGMELENQGGVGTELNHWEKRLLENEAMTGSHTQNRVLSRITLALMEDTG         
Sbjct: 361 LEGMELENQGGVGTELNHWEKRLLENEAMTGSHTQNRVLSRITLALMEDTG--------- 411

Query: 421 EKLDWGRGMGCDFVRKSCKFWIDQQRQKRQMLSPYCDTLRSNPLQLTCRQDQRAVAVCNL 480
                                       RQMLSPYCDTLRSNPLQLTCRQDQRAVAVCNL
Sbjct: 412 ----------------------------RQMLSPYCDTLRSNPLQLTCRQDQRAVAVCNL 443

Query: 481 QKFPKPLPQEYQYFDELSGIPAEDLPYYGGSVEIADYCPFSQEFSWHLSGEYQRSSDCRI 540
           QKFPKPLPQEYQYFDELSGIPAEDLPYYGGSVEIADYCPFSQEFSWHLSGEYQRSSDCRI
Sbjct: 444 QKFPKPLPQEYQYFDELSGIPAEDLPYYGGSVEIADYCPFSQEFSWHLSGEYQRSSDCRI 503

Query: 541 LENQPEIFKNYGAEKYGPHSVCLIQKSAFVMEKCERKLSYPDWGSGCYQVSCSPQGLKVW 600
           LENQPEIFKNYGAEKYGPHSVCLIQKSAFVMEKCERKLSYPDWGSGCYQVSCSPQGLKVW
Sbjct: 504 LENQPEIFKNYGAEKYGPHSVCLIQKSAFVMEKCERKLSYPDWGSGCYQVSCSPQGLKVW 563

Query: 601 VQDTSYLCSRAGQVLPVSIQMNGWIHDGNLLCPSCWDFCELCPPETDPPATNLTRALPLD 660
           VQDTSYLCSRAGQVLPVSIQMNGWIHDGNLLCPSCWDFCELCPPETDPPATNLTRALPLD
Sbjct: 564 VQDTSYLCSRAGQVLPVSIQMNGWIHDGNLLCPSCWDFCELCPPETDPPATNLTRALPLD 623

Query: 661 LCSCSSSLVVTLWLLLGNLFPLLAGFLLCIWH 692
           LCSCSSSLVVTLWLLLGNLFPLLAGFLLCIWH
Sbjct: 624 LCSCSSSLVVTLWLLLGNLFPLLAGFLLCIWH 655


>gi|239755922 PREDICTED: similar to Uncharacterized protein FLJ42957
           [Homo sapiens]
          Length = 143

 Score = 34.3 bits (77), Expect = 0.40
 Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 10/85 (11%)

Query: 400 SRITLALMEDTGWYKANYSMA---------EKLDWGRGMGCDFVRK-SCKFWIDQQRQKR 449
           SR+ L +   T W ++ YS A         ++ D G   G   V+K +CK  I  Q  + 
Sbjct: 18  SRVQLTVPSFTAWLRSRYSKALFMVLRRAAQEKDKGVCQGWHCVKKWACKGRIPGQPLQP 77

Query: 450 QMLSPYCDTLRSNPLQLTCRQDQRA 474
           Q L PY  +L  +P   T R   RA
Sbjct: 78  QPLGPYLRSLSQHPATQTPRPQARA 102


>gi|239750440 PREDICTED: hypothetical protein XP_002347362 [Homo
           sapiens]
          Length = 143

 Score = 34.3 bits (77), Expect = 0.40
 Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 10/85 (11%)

Query: 400 SRITLALMEDTGWYKANYSMA---------EKLDWGRGMGCDFVRK-SCKFWIDQQRQKR 449
           SR+ L +   T W ++ YS A         ++ D G   G   V+K +CK  I  Q  + 
Sbjct: 18  SRVQLTVPSFTAWLRSRYSKALFMVLRRAAQEKDKGVCQGWHCVKKWACKGRIPGQPLQP 77

Query: 450 QMLSPYCDTLRSNPLQLTCRQDQRA 474
           Q L PY  +L  +P   T R   RA
Sbjct: 78  QPLGPYLRSLSQHPATQTPRPQARA 102


>gi|239744742 PREDICTED: hypothetical protein XP_002343249 [Homo
           sapiens]
          Length = 143

 Score = 34.3 bits (77), Expect = 0.40
 Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 10/85 (11%)

Query: 400 SRITLALMEDTGWYKANYSMA---------EKLDWGRGMGCDFVRK-SCKFWIDQQRQKR 449
           SR+ L +   T W ++ YS A         ++ D G   G   V+K +CK  I  Q  + 
Sbjct: 18  SRVQLTVPSFTAWLRSRYSKALFMVLRRAAQEKDKGVCQGWHCVKKWACKGRIPGQPLQP 77

Query: 450 QMLSPYCDTLRSNPLQLTCRQDQRA 474
           Q L PY  +L  +P   T R   RA
Sbjct: 78  QPLGPYLRSLSQHPATQTPRPQARA 102


>gi|16554449 zonadhesin isoform 3 [Homo sapiens]
          Length = 2812

 Score = 33.5 bits (75), Expect = 0.68
 Identities = 32/116 (27%), Positives = 42/116 (36%), Gaps = 11/116 (9%)

Query: 554  EKYGPHSVCLIQKSAFVMEKCERKLSYPDWGSGCYQVSCSPQGLKVWVQDTSYLCSRAG- 612
            ++  P   C         EKCE  L  P W     ++  +P      V   + LC   G 
Sbjct: 2121 QQENPSGNCRAADLRRAREKCEAALRAPVWAQCASRIDLTP----FLVDCANTLCEFGGL 2176

Query: 613  -QVLPVSIQMNGWIHDGNLLCPSCWDFCELCPPETDPPATNLTRALPLDLCSCSSS 667
             Q L  ++Q  G       L P  W     CP E  P  ++ T  LP    SCS S
Sbjct: 2177 YQALCQALQAFGATCQSQGLKPPLWRNSSFCPLEC-PAYSSYTNCLP----SCSPS 2227


>gi|27881494 zonadhesin isoform 6 [Homo sapiens]
          Length = 2721

 Score = 33.5 bits (75), Expect = 0.68
 Identities = 32/116 (27%), Positives = 42/116 (36%), Gaps = 11/116 (9%)

Query: 554  EKYGPHSVCLIQKSAFVMEKCERKLSYPDWGSGCYQVSCSPQGLKVWVQDTSYLCSRAG- 612
            ++  P   C         EKCE  L  P W     ++  +P      V   + LC   G 
Sbjct: 2121 QQENPSGNCRAADLRRAREKCEAALRAPVWAQCASRIDLTP----FLVDCANTLCEFGGL 2176

Query: 613  -QVLPVSIQMNGWIHDGNLLCPSCWDFCELCPPETDPPATNLTRALPLDLCSCSSS 667
             Q L  ++Q  G       L P  W     CP E  P  ++ T  LP    SCS S
Sbjct: 2177 YQALCQALQAFGATCQSQGLKPPLWRNSSFCPLEC-PAYSSYTNCLP----SCSPS 2227


>gi|239753327 PREDICTED: zinc finger protein 806 [Homo sapiens]
          Length = 544

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 9/70 (12%)

Query: 549 KNYGAEKYGPHSVCLIQKSAFVMEKC-----ERKLSYPDWGSGCYQVSCSPQGLKVWVQD 603
           K+Y  ++YG +    + +S +++  C     E    + +W +GC Q S  P+  KV   D
Sbjct: 212 KSYKCDQYGKN----LSQSQYLIVHCKTHSGETPYEFHEWPTGCKQSSDLPRCQKVPSGD 267

Query: 604 TSYLCSRAGQ 613
             Y C   G+
Sbjct: 268 NPYKCKECGK 277


>gi|239747893 PREDICTED: zinc finger protein 806 [Homo sapiens]
          Length = 589

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 9/70 (12%)

Query: 549 KNYGAEKYGPHSVCLIQKSAFVMEKC-----ERKLSYPDWGSGCYQVSCSPQGLKVWVQD 603
           K+Y  ++YG +    + +S +++  C     E    + +W +GC Q S  P+  KV   D
Sbjct: 257 KSYKCDQYGKN----LSQSQYLIVHCKTHSGETPYEFHEWPTGCKQSSDLPRCQKVPSGD 312

Query: 604 TSYLCSRAGQ 613
             Y C   G+
Sbjct: 313 NPYKCKECGK 322


>gi|239741794 PREDICTED: zinc finger protein 806 [Homo sapiens]
          Length = 589

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 9/70 (12%)

Query: 549 KNYGAEKYGPHSVCLIQKSAFVMEKC-----ERKLSYPDWGSGCYQVSCSPQGLKVWVQD 603
           K+Y  ++YG +    + +S +++  C     E    + +W +GC Q S  P+  KV   D
Sbjct: 257 KSYKCDQYGKN----LSQSQYLIVHCKTHSGETPYEFHEWPTGCKQSSDLPRCQKVPSGD 312

Query: 604 TSYLCSRAGQ 613
             Y C   G+
Sbjct: 313 NPYKCKECGK 322


>gi|56682964 legumain preproprotein [Homo sapiens]
          Length = 433

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 1/53 (1%)

Query: 72  TEVINKVHLKANHVVKRDVDEHLRIKTVYDKSVEELLPEKKNLVKNKLFPQAI 124
           TE I + HL A H++++ V + + +    +  VE+LL E+  L  +  +P+A+
Sbjct: 332 TEEIQR-HLDARHLIEKSVRKIVSLLAASEAEVEQLLSERAPLTGHSCYPEAL 383


>gi|56682962 legumain preproprotein [Homo sapiens]
          Length = 433

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 1/53 (1%)

Query: 72  TEVINKVHLKANHVVKRDVDEHLRIKTVYDKSVEELLPEKKNLVKNKLFPQAI 124
           TE I + HL A H++++ V + + +    +  VE+LL E+  L  +  +P+A+
Sbjct: 332 TEEIQR-HLDARHLIEKSVRKIVSLLAASEAEVEQLLSERAPLTGHSCYPEAL 383


>gi|40018644 hypothetical protein LOC55668 isoform 2 [Homo sapiens]
          Length = 477

 Score = 32.0 bits (71), Expect = 2.0
 Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 18/94 (19%)

Query: 521 SQEFSWHLSGEYQRSSDCRILENQPEIFKNYGAEKYGPHSVCLIQKSAFVMEKCERKLSY 580
           S++ SWH S  +  ++ CR L  + ++ K   +E               V    ++KL  
Sbjct: 106 SKQHSWHESDSFTENAPCRPLRRRRKV-KRVTSE---------------VAASLQQKLKV 149

Query: 581 PDWG--SGCYQVSCSPQGLKVWVQDTSYLCSRAG 612
            DW    GC   S   Q L  W ++T +  S  G
Sbjct: 150 SDWSYERGCRFKSAKKQRLSRWKENTPWTSSGHG 183


>gi|40018646 hypothetical protein LOC55668 isoform 1 [Homo sapiens]
          Length = 482

 Score = 32.0 bits (71), Expect = 2.0
 Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 18/94 (19%)

Query: 521 SQEFSWHLSGEYQRSSDCRILENQPEIFKNYGAEKYGPHSVCLIQKSAFVMEKCERKLSY 580
           S++ SWH S  +  ++ CR L  + ++ K   +E               V    ++KL  
Sbjct: 106 SKQHSWHESDSFTENAPCRPLRRRRKV-KRVTSE---------------VAASLQQKLKV 149

Query: 581 PDWG--SGCYQVSCSPQGLKVWVQDTSYLCSRAG 612
            DW    GC   S   Q L  W ++T +  S  G
Sbjct: 150 SDWSYERGCRFKSAKKQRLSRWKENTPWTSSGHG 183


>gi|197304721 cytochrome b-561 domain containing 1 isoform 1 [Homo
           sapiens]
          Length = 251

 Score = 31.2 bits (69), Expect = 3.4
 Identities = 39/157 (24%), Positives = 56/157 (35%), Gaps = 21/157 (13%)

Query: 534 RSSDCRILENQPEIFKNYGAEKYGPHSVCLIQKSAFVMEKCERKLSY---------PDWG 584
           RS   R     PEI   + A+  G    CL    A ++   E  L +           W 
Sbjct: 58  RSEGGRARWVMPEIPALWEADAGGSLEFCLCMAEAILLFSPEHSLFFFCSRKARIRLHWA 117

Query: 585 SGCYQVSCSPQGLKVWVQDTSYLCSRAGQVLPVSIQMNGWIHDGNLLCPSCWDFCELCPP 644
                + C+  GL   +       SR    LP  +  + W+    LL  +    C LC  
Sbjct: 118 GQTLAILCAALGLGFIIS------SRTRSELPHLVSWHSWVGALTLLATAVQALCGLC-- 169

Query: 645 ETDPPATNLTRALPLDLCSCSSSLVV----TLWLLLG 677
              P A  ++R   L L   +  LVV    T+ +LLG
Sbjct: 170 LLCPRAARVSRVARLKLYHLTCGLVVYLMATVTVLLG 206


>gi|48762934 alpha 2 type I collagen [Homo sapiens]
          Length = 1366

 Score = 30.4 bits (67), Expect = 5.7
 Identities = 24/99 (24%), Positives = 38/99 (38%), Gaps = 19/99 (19%)

Query: 531  EYQRSSDCRILENQPEIFKNYGAEKYGPHSVCLIQKSAFVMEKCERKLSYPDWGSGCYQV 590
            +Y+  +  + L NQ E        +  P   C            + +LS+P+W SG Y +
Sbjct: 1132 DYEVDATLKSLNNQIETLLTPEGSRKNPARTCR-----------DLRLSHPEWSSGYYWI 1180

Query: 591  ----SCSPQGLKVWVQ-DTSYLCSRAGQVLPVSIQMNGW 624
                 C+   +KV+    T   C RA    P +I    W
Sbjct: 1181 DPNQGCTMDAIKVYCDFSTGETCIRA---QPENIPAKNW 1216


>gi|119964721 fer (fps/fes related) tyrosine kinase [Homo sapiens]
          Length = 822

 Score = 30.4 bits (67), Expect = 5.7
 Identities = 24/105 (22%), Positives = 42/105 (40%), Gaps = 14/105 (13%)

Query: 363 GMELENQGGVGTELNHWEKRLLENEAMTGSHTQNRVLSRITLALMEDTGWYKANYSMAEK 422
           G +L+N      +L  WE RLLE            V   + L +  D  +     ++  +
Sbjct: 4   GSDLKNSHEAVLKLQDWELRLLET-----------VKKFMALRIKSDKEYASTLQNLCNQ 52

Query: 423 LDWGRGMGCDFVRKSCKFW---IDQQRQKRQMLSPYCDTLRSNPL 464
           +D    +  ++V    K W   I Q  Q  +++  + + L S PL
Sbjct: 53  VDKESTVQMNYVSNVSKSWLLMIQQTEQLSRIMKTHAEDLNSGPL 97


>gi|153251823 stromal protein associated with thymii and lymph nodes
           [Homo sapiens]
          Length = 351

 Score = 29.6 bits (65), Expect = 9.8
 Identities = 15/45 (33%), Positives = 22/45 (48%)

Query: 462 NPLQLTCRQDQRAVAVCNLQKFPKPLPQEYQYFDELSGIPAEDLP 506
           +P  +T  QD     VC ++ FP PLP+   +     GIP   +P
Sbjct: 84  HPQHVTHIQDLTGKPVCVVRDFPAPLPESTVFSGCQMGIPTISVP 128


>gi|211971038 tousled-like kinase 1 isoform 3 [Homo sapiens]
          Length = 670

 Score = 29.6 bits (65), Expect = 9.8
 Identities = 18/69 (26%), Positives = 33/69 (47%)

Query: 80  LKANHVVKRDVDEHLRIKTVYDKSVEELLPEKKNLVKNKLFPQAISYLEKTFQVRRPAGT 139
           L+AN  ++R +DE  ++   Y + + + +   K L+  K   + +S  EK+ Q R   G 
Sbjct: 147 LRANCDLRRQIDEQQKLLEKYKERLNKCISMSKKLLIEKSTQEKLSSREKSMQDRLRLGH 206

Query: 140 ILLSRQCAT 148
               R  A+
Sbjct: 207 FTTVRHGAS 215


>gi|211971036 tousled-like kinase 1 isoform 2 [Homo sapiens]
          Length = 718

 Score = 29.6 bits (65), Expect = 9.8
 Identities = 18/69 (26%), Positives = 33/69 (47%)

Query: 80  LKANHVVKRDVDEHLRIKTVYDKSVEELLPEKKNLVKNKLFPQAISYLEKTFQVRRPAGT 139
           L+AN  ++R +DE  ++   Y + + + +   K L+  K   + +S  EK+ Q R   G 
Sbjct: 195 LRANCDLRRQIDEQQKLLEKYKERLNKCISMSKKLLIEKSTQEKLSSREKSMQDRLRLGH 254

Query: 140 ILLSRQCAT 148
               R  A+
Sbjct: 255 FTTVRHGAS 263


>gi|33636698 tousled-like kinase 1 isoform 1 [Homo sapiens]
          Length = 766

 Score = 29.6 bits (65), Expect = 9.8
 Identities = 18/69 (26%), Positives = 33/69 (47%)

Query: 80  LKANHVVKRDVDEHLRIKTVYDKSVEELLPEKKNLVKNKLFPQAISYLEKTFQVRRPAGT 139
           L+AN  ++R +DE  ++   Y + + + +   K L+  K   + +S  EK+ Q R   G 
Sbjct: 243 LRANCDLRRQIDEQQKLLEKYKERLNKCISMSKKLLIEKSTQEKLSSREKSMQDRLRLGH 302

Query: 140 ILLSRQCAT 148
               R  A+
Sbjct: 303 FTTVRHGAS 311


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.137    0.444 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,089,392
Number of Sequences: 37866
Number of extensions: 1459656
Number of successful extensions: 3598
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 3584
Number of HSP's gapped (non-prelim): 24
length of query: 692
length of database: 18,247,518
effective HSP length: 109
effective length of query: 583
effective length of database: 14,120,124
effective search space: 8232032292
effective search space used: 8232032292
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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