Search of human proteins with 223278393

Search of human proteins with 223278393

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|223278393 protein phosphatase 1, regulatory (inhibitor)
subunit 3G [Homo sapiens]
         (358 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|223278393 protein phosphatase 1, regulatory (inhibitor) subun...   730   0.0  
gi|5453948 protein phosphatase 1, regulatory subunit 3D [Homo sa...   103   2e-22
gi|153792466 protein phosphatase 1, regulatory (inhibitor) subun...    69   8e-12
gi|167614502 protein phosphatase 1, regulatory (inhibitor) subun...    63   5e-10
gi|239757810 PREDICTED: similar to protein phosphatase 1, regula...    54   3e-07
gi|58761532 protein phosphatase 1, regulatory (inhibitor) subuni...    54   3e-07
gi|4885559 protein phosphatase 1, regulatory (inhibitor) subunit...    52   6e-07
gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo sap...    40   0.004
gi|160707881 formin 2 [Homo sapiens]                                   39   0.005
gi|156071474 solute carrier family 4, anion exchanger, member 2 ...    39   0.009
gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo sap...    39   0.009
gi|156416026 zinc finger protein 219 [Homo sapiens]                    39   0.009
gi|156415998 zinc finger protein 219 [Homo sapiens]                    39   0.009
gi|156415996 zinc finger protein 219 [Homo sapiens]                    39   0.009
gi|148833506 obscurin, cytoskeletal calmodulin and titin-interac...    38   0.012
gi|122937321 UNC homeobox [Homo sapiens]                               38   0.016
gi|55741677 SET domain containing 1A [Homo sapiens]                    37   0.027
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin...    37   0.027
gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e...    37   0.036
gi|207113160 Treacher Collins-Franceschetti syndrome 1 isoform d...    37   0.036
gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a ...    37   0.036
gi|57164979 Treacher Collins-Franceschetti syndrome 1 isoform c ...    37   0.036
gi|4502737 cyclin-dependent kinase 5, regulatory subunit 1 [Homo...    36   0.047
gi|169179951 PREDICTED: hypothetical protein [Homo sapiens]            36   0.061
gi|169218206 PREDICTED: similar to hCG2042704 [Homo sapiens]           36   0.061
gi|169178983 PREDICTED: hypothetical protein [Homo sapiens]            36   0.061
gi|239743855 PREDICTED: hypothetical protein [Homo sapiens]            36   0.061
gi|34365793 WNK lysine deficient protein kinase 4 [Homo sapiens]       35   0.079
gi|157266334 tubby like protein 1 [Homo sapiens]                       35   0.079
gi|56549129 transmembrane anchor protein 1 isoform 3 [Homo sapiens]    35   0.10 

>gi|223278393 protein phosphatase 1, regulatory (inhibitor) subunit
           3G [Homo sapiens]
          Length = 358

 Score =  730 bits (1884), Expect = 0.0
 Identities = 358/358 (100%), Positives = 358/358 (100%)

Query: 1   MEPIGARLSLEAPGPAPFREAPPAEELPAPVVPCVQGGGDGGGASETPSPDAQLGDRPLS 60
           MEPIGARLSLEAPGPAPFREAPPAEELPAPVVPCVQGGGDGGGASETPSPDAQLGDRPLS
Sbjct: 1   MEPIGARLSLEAPGPAPFREAPPAEELPAPVVPCVQGGGDGGGASETPSPDAQLGDRPLS 60

Query: 61  PKEEAAPQEQEELLECRRRCRARSFSLPADPILQAAKFLQQQQQQAVALGGEGAEDAQLG 120
           PKEEAAPQEQEELLECRRRCRARSFSLPADPILQAAKFLQQQQQQAVALGGEGAEDAQLG
Sbjct: 61  PKEEAAPQEQEELLECRRRCRARSFSLPADPILQAAKFLQQQQQQAVALGGEGAEDAQLG 120

Query: 121 PGGCCAKCKKRVQFADTLGLSLASVKHFSEAEEPQVPPAVLSRLRSFPMRAEDLEQLGGL 180
           PGGCCAKCKKRVQFADTLGLSLASVKHFSEAEEPQVPPAVLSRLRSFPMRAEDLEQLGGL
Sbjct: 121 PGGCCAKCKKRVQFADTLGLSLASVKHFSEAEEPQVPPAVLSRLRSFPMRAEDLEQLGGL 180

Query: 181 LAAAAVAAPLSAPPSRLRPLFQLPGPSAAAERLQRQRVCLERVQCSTASGAEVKGSGRVL 240
           LAAAAVAAPLSAPPSRLRPLFQLPGPSAAAERLQRQRVCLERVQCSTASGAEVKGSGRVL
Sbjct: 181 LAAAAVAAPLSAPPSRLRPLFQLPGPSAAAERLQRQRVCLERVQCSTASGAEVKGSGRVL 240

Query: 241 SCPGPRAVTVRYTFTEWRSFLDVPAELQPEPLEPQQPEAPSGASEPGSGDAKKEPGAECF 300
           SCPGPRAVTVRYTFTEWRSFLDVPAELQPEPLEPQQPEAPSGASEPGSGDAKKEPGAECF
Sbjct: 241 SCPGPRAVTVRYTFTEWRSFLDVPAELQPEPLEPQQPEAPSGASEPGSGDAKKEPGAECF 300

Query: 301 HFSLCLPPGLQPEDEEDADERGVAVHFAVCYRCAQGEYWDNNAGANYTLRYARPADAL 358
           HFSLCLPPGLQPEDEEDADERGVAVHFAVCYRCAQGEYWDNNAGANYTLRYARPADAL
Sbjct: 301 HFSLCLPPGLQPEDEEDADERGVAVHFAVCYRCAQGEYWDNNAGANYTLRYARPADAL 358


>gi|5453948 protein phosphatase 1, regulatory subunit 3D [Homo
           sapiens]
          Length = 299

 Score =  103 bits (258), Expect = 2e-22
 Identities = 108/316 (34%), Positives = 135/316 (42%), Gaps = 75/316 (23%)

Query: 40  DGGGASETPSPDAQLGDRPLSPKEEAAPQEQEELLECRRRCRARSFSLPADPILQAAKFL 99
           DGG A E P      G    +P    AP   +  L      RARS  LP+ P        
Sbjct: 31  DGGVALE-PRACRPPGSPGRAPPPTPAPSGCDPRLRPIILRRARS--LPSSP-------- 79

Query: 100 QQQQQQAVALGGEGAEDAQLGPGGCCAKCKKRVQFADTLGLSLASVKHFSEAEEPQVPPA 159
            +++Q+A      GA  A   PG  C++ K RV+FAD LGL LA VK F+  ++P VP  
Sbjct: 80  -ERRQKAA-----GAPGAACRPG--CSQ-KLRVRFADALGLELAQVKVFNAGDDPSVPLH 130

Query: 160 VLSRL---RSFPMRAEDLEQLGGLLAAAAVAAPLSAPPSRLRPLFQLPGPSAAA---ERL 213
           VLSRL         ++DLE     L                      P P  AA   ERL
Sbjct: 131 VLSRLAINSDLCCSSQDLEFTLHCLVP------------------DFPPPVEAADFGERL 172

Query: 214 QRQRVCLERVQCSTASGAEVKGSGRVLSCPGPRAVTVRYTFTEWRSFLDVPAELQPEPLE 273
           QRQ VCLERV CS      + G+ RV +    + V VRYTF+ WRS  +  A  +     
Sbjct: 173 QRQLVCLERVTCSDLG---ISGTVRVCNVAFEKQVAVRYTFSGWRSTHEAVARWR----- 224

Query: 274 PQQPEAPSGASEPGSGDAKKEPGAECFHFSLCLPPGLQPEDEEDADERGVAVHFAVCYRC 333
                          G A  E   + F F   +PP L         E G  VHFAV Y+ 
Sbjct: 225 ---------------GPAGPEGTEDVFTFGFPVPPFLL--------ELGSRVHFAVRYQV 261

Query: 334 AQGEYWDNNAGANYTL 349
           A  EYWDNN   +Y+L
Sbjct: 262 AGAEYWDNNDHRDYSL 277


>gi|153792466 protein phosphatase 1, regulatory (inhibitor) subunit
           3B [Homo sapiens]
          Length = 285

 Score = 68.6 bits (166), Expect = 8e-12
 Identities = 64/245 (26%), Positives = 92/245 (37%), Gaps = 52/245 (21%)

Query: 107 VALGGEGAEDAQLGPGGCCAKCKKRVQFADTLGLSLASVKHFSEAEEPQVPPAVLSRLRS 166
           + L  +      + P     K KKRV FAD  GL+L  VK FSE ++P   P  ++ L  
Sbjct: 38  IQLSSKNEASGMVAPAVQEKKVKKRVSFADNQGLALTMVKVFSEFDDPLDMPFNITEL-- 95

Query: 167 FPMRAEDLEQLGGLLAAAAVAAPLSAPPSRLRPLFQLPGPSAA--AERLQRQRVCLERVQ 224
                  L+ +  L  A + +  L          F  P         RLQ   VCLE   
Sbjct: 96  -------LDNIVSLTTAESESFVLD---------FSQPSADYLDFRNRLQADHVCLE--N 137

Query: 225 CSTASGAEVKGSGRVLSCPGPRAVTVRYTFTEWRSFLDVPAELQPEPLEPQQPEAPSGAS 284
           C     A + G+ +V +    + V +R TF  W+S+ D P +                  
Sbjct: 138 CVLKDKA-IAGTVKVQNLAFEKTVKIRMTFDTWKSYTDFPCQYVK--------------- 181

Query: 285 EPGSGDAKKEPGAECFHFSLCLPPGLQPEDEEDADERGVAVHFAVCYRCAQGEYWDNNAG 344
                D       + F F + LP  +Q  +          + FAV Y C    YWD+N G
Sbjct: 182 -----DTYAGSDRDTFSFDISLPEKIQSYER---------MEFAVYYECNGQTYWDSNRG 227

Query: 345 ANYTL 349
            NY +
Sbjct: 228 KNYRI 232


>gi|167614502 protein phosphatase 1, regulatory (inhibitor) subunit
           3A [Homo sapiens]
          Length = 1122

 Score = 62.8 bits (151), Expect = 5e-10
 Identities = 62/240 (25%), Positives = 92/240 (38%), Gaps = 57/240 (23%)

Query: 110 GGEGAEDAQLGPGGCCAKCKKRVQFADTLGLSLASVKHFSEAEEPQVPPAVLSRLRSFPM 169
           G + +ED  L      +   +RV FAD+ G +L SVK F   E P       S   +F +
Sbjct: 45  GSDSSEDIYLDTP---SSGTRRVSFADSFGFNLVSVKEFDCWELP-------SASTTFDL 94

Query: 170 RAEDLEQLGGLLAAAAVAAPLSAPPSRLRPLFQLPGPSA-AAERLQRQRVCLERVQCSTA 228
             +       +LA                PLF LP       ++LQ Q+  LE  + S  
Sbjct: 95  GTDIFHTEEYVLA----------------PLFDLPSSKEDLMQQLQIQKAILESTE-SLL 137

Query: 229 SGAEVKGSGRVLSCPGPRAVTVRYTFTEWRSFLDVPAELQPEPLEPQQPEAPSGASEPGS 288
               +KG  RVL+    + V VR +  +W++  D+ AE  P   + +  +          
Sbjct: 138 GSTSIKGIIRVLNVSFEKLVYVRMSLDDWQTHYDILAEYVPNSCDGETDQ---------- 187

Query: 289 GDAKKEPGAECFHFSLCLPPGLQPEDEEDADERGVAVHFAVCYRCAQGEYWDNNAGANYT 348
                      F F + L P  Q +        G  V F + Y  + G +W NN G NYT
Sbjct: 188 -----------FSFKIVLVPPYQKD--------GSKVEFCIRYETSVGTFWSNNNGTNYT 228


>gi|239757810 PREDICTED: similar to protein phosphatase 1,
           regulatory (inhibitor) subunit 3F [Homo sapiens]
          Length = 724

 Score = 53.5 bits (127), Expect = 3e-07
 Identities = 57/182 (31%), Positives = 69/182 (37%), Gaps = 42/182 (23%)

Query: 197 LRPLFQLPGPSAAAERLQRQRVCLERV---QCSTASGAEV----------KGSGRVLSCP 243
           L P F LP      ERL R  V LE +     +   GA V          +G  RVL+  
Sbjct: 115 LVPTFSLPPAPGRLERLGRVMVELEALLPPPGAVPGGAGVWVPGGRPPVLRGLVRVLNRS 174

Query: 244 GPRAVTVRYTFTEWRSFLDVPAELQPEPLEPQQPEAPSGASEPGSGDAKKEPGAECFHFS 303
             +AV VR +   W SF D PA   P       P A  GA   G+GD   +PG       
Sbjct: 175 FEKAVHVRASHDGWASFCDHPARYVPR----SPPWA--GAGGTGAGDPILDPG------- 221

Query: 304 LCLPPGLQPEDEEDADER----------------GVAVHFAVCYRCAQGEYWDNNAGANY 347
           L L PG       D   R                G  + F V Y   +G +W NN G NY
Sbjct: 222 LGLGPGQASASSPDDGGRTDRFAFQLPFAEGAGDGARLDFVVRYETPEGTFWANNHGRNY 281

Query: 348 TL 349
           T+
Sbjct: 282 TV 283


>gi|58761532 protein phosphatase 1, regulatory (inhibitor) subunit
           3F [Homo sapiens]
          Length = 799

 Score = 53.5 bits (127), Expect = 3e-07
 Identities = 57/182 (31%), Positives = 69/182 (37%), Gaps = 42/182 (23%)

Query: 197 LRPLFQLPGPSAAAERLQRQRVCLERV---QCSTASGAEV----------KGSGRVLSCP 243
           L P F LP      ERL R  V LE +     +   GA V          +G  RVL+  
Sbjct: 115 LVPTFSLPPAPGRLERLGRVMVELEALLPPPGAVPGGAGVWVPGGRPPVLRGLVRVLNRS 174

Query: 244 GPRAVTVRYTFTEWRSFLDVPAELQPEPLEPQQPEAPSGASEPGSGDAKKEPGAECFHFS 303
             +AV VR +   W SF D PA   P       P A  GA   G+GD   +PG       
Sbjct: 175 FEKAVHVRASHDGWASFCDHPARYVPR----SPPWA--GAGGTGAGDPILDPG------- 221

Query: 304 LCLPPGLQPEDEEDADER----------------GVAVHFAVCYRCAQGEYWDNNAGANY 347
           L L PG       D   R                G  + F V Y   +G +W NN G NY
Sbjct: 222 LGLGPGQASASSPDDGGRTDRFAFQLPFAEGAGDGARLDFVVRYETPEGTFWANNHGRNY 281

Query: 348 TL 349
           T+
Sbjct: 282 TV 283


>gi|4885559 protein phosphatase 1, regulatory (inhibitor) subunit 3C
           [Homo sapiens]
          Length = 317

 Score = 52.4 bits (124), Expect = 6e-07
 Identities = 59/228 (25%), Positives = 90/228 (39%), Gaps = 56/228 (24%)

Query: 127 KCKKRVQFADTLGLSLASVKHFSEA-EEPQVPPAVLSRLRSFPMRAEDLEQLGGLLAAAA 185
           + KKRV FAD+ GLSL ++  FS+  EEP                A DL+    LL    
Sbjct: 80  QAKKRVVFADSKGLSLTAIHVFSDLPEEP----------------AWDLQF--DLLDLND 121

Query: 186 VAAPLSAPPSRLRPLFQLPGPS----AAAERLQRQRVCLERVQCSTASGAEVKGSGRVLS 241
           +++ L     +   +   P PS    +     Q+  VCLE   CS      V G+ +V +
Sbjct: 122 ISSALKHHEEK-NLILDFPQPSTDYLSFRSHFQKNFVCLEN--CSLQERT-VTGTVKVKN 177

Query: 242 CPGPRAVTVRYTFTEWRSFLDVPAELQPEPLEPQQPEAPSGASEPGSGDAKKEPGAECFH 301
               + V +R TF  W+++ DV                       G  D+      + F 
Sbjct: 178 VSFEKKVQIRITFDSWKNYTDVDCVYMKNVY--------------GGTDS------DTFS 217

Query: 302 FSLCLPPGLQPEDEEDADERGVAVHFAVCYRCAQGEYWDNNAGANYTL 349
           F++ LPP +  E +         + F + Y      +WDNN G NY +
Sbjct: 218 FAIDLPPVIPTEQK---------IEFCISYHANGQVFWDNNDGQNYRI 256


>gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo sapiens]
          Length = 2462

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 68/293 (23%), Positives = 103/293 (35%), Gaps = 38/293 (12%)

Query: 9    SLEAPGPAPFREAPPAEELPAPVVPCVQGGGDGGGASETPSPDAQLGDRPLSPKEE---- 64
            +L A GP P    PP E++PAP  P        G  +  P+P +     P+ PKEE    
Sbjct: 755  TLGADGPPPGPPTPPPEDIPAPTEP-TPASEATGAPTPPPAPPSPSAPPPVVPKEEKEEE 813

Query: 65   --AAPQEQEELLECRRRCRARSFSLPADPILQAAKFLQQQQQQAVALGGEGAEDAQLGPG 122
              AAP  +E   E ++   A   ++      +  K    ++ +     G+ AE A+    
Sbjct: 814  TAAAPPVEEG--EEQKPPAAEELAVDTGKAEEPVKSECTEEAEEGPAKGKDAEAAEATAE 871

Query: 123  GCCAKCKKRVQFADTLGLSLASVKHFSEAEEPQVPPAVLSRLRSFPMRAEDLEQLGGLLA 182
            G     KK        G   A+    S A +     A  S          D  +L  L  
Sbjct: 872  GALKAEKKEG------GSGRATTAKSSGAPQDSDSSATCSADEVDEAEGGDKNRL--LSP 923

Query: 183  AAAVAAPLSAPPSRLRPLFQLPGPSAAAERLQRQRVCLERVQCSTASGAEVKGSGRVLSC 242
              ++  P   P +   P   L       ++L+++   +  +Q +     E        + 
Sbjct: 924  RPSLLTPTGDPRANASPQKPLD-----LKQLKQRAAAIPPIQVTKVH--EPPREDAAPTK 976

Query: 243  PGPRAVTVRYTFTEWRSFLDVPAELQPEPLEPQQP-EAPSGASEPGSGDAKKE 294
            P P A                P  LQPE   PQQP  +P G S   +  A KE
Sbjct: 977  PAPPAP-------------PPPQNLQPESDAPQQPGSSPRGKSRSPAPPADKE 1016


>gi|160707881 formin 2 [Homo sapiens]
          Length = 1722

 Score = 39.3 bits (90), Expect = 0.005
 Identities = 31/97 (31%), Positives = 37/97 (38%), Gaps = 17/97 (17%)

Query: 262 DVPAELQPEPLEPQQPEAPSG----------ASEPGSGDAKKEPGAECFHFSLCLP---- 307
           D+P  L  EP EPQQP +P G          A++P    AK  P +  F F    P    
Sbjct: 278 DLPESLAAEPREPQQPPSPGGLPVSEAPSLPAAQPA---AKDSPSSTAFPFPEAGPGEEA 334

Query: 308 PGLQPEDEEDADERGVAVHFAVCYRCAQGEYWDNNAG 344
            G       D DE G    F    R + GE W    G
Sbjct: 335 AGAPVRGAGDTDEEGEEDAFEDAPRGSPGEEWAPEVG 371



 Score = 35.0 bits (79), Expect = 0.10
 Identities = 79/316 (25%), Positives = 103/316 (32%), Gaps = 104/316 (32%)

Query: 39  GDGGGASETPSP-DAQLGDRPLSPKEEAAP----------------------QEQEELLE 75
           G GG     P P +A++G RP++   E A                        EQE+LL 
Sbjct: 143 GPGG-----PGPAEARVGGRPIAEDVETAAGAQDGQRTSSGSDTDIYSFHSATEQEDLLS 197

Query: 76  CRRRCRARSFSLPADPILQAAKFLQQQQQQAVALGGE-----------------GAEDAQ 118
             ++    +  L      Q    LQQQQQQ    G E                 G +   
Sbjct: 198 DIQQ----AIRLQQQQQQQLQLQLQQQQQQQQLQGAEEPAAPPTAVSPQPGAFLGLDRFL 253

Query: 119 LGPGGCCAKCKKRVQFADTLG-LSLASVKHFSEAEEPQVPPAVLSRLRSFPMRAEDLEQL 177
           LGP G   +          L  LS       +E  EPQ PP+                  
Sbjct: 254 LGPSGGAGEAPGSPDTEQALSALSDLPESLAAEPREPQQPPSP----------------- 296

Query: 178 GGLLAAAAVAAPLSAPPSRLRP---LFQLPGPSAAAERLQRQRVCLERVQCSTASGAEVK 234
           GGL  + A + P + P ++  P    F  P      E                A+GA V+
Sbjct: 297 GGLPVSEAPSLPAAQPAAKDSPSSTAFPFPEAGPGEE----------------AAGAPVR 340

Query: 235 GSGRV-------LSCPGPRAVTVRYTFTEWRSFL--DVPAELQPEPLEPQQ-PEAPSGAS 284
           G+G              PR         EW   +  D P  L  EP E  Q P+AP+ AS
Sbjct: 341 GAGDTDEEGEEDAFEDAPRGSPGE----EWAPEVGEDAPQRLGEEPEEEAQGPDAPAAAS 396

Query: 285 EPGSGDAKKEPGAECF 300
            PGS      P   CF
Sbjct: 397 LPGS----PAPSQRCF 408


>gi|156071474 solute carrier family 4, anion exchanger, member 2
           (erythrocyte membrane protein band 3-like 1) [Homo
           sapiens]
          Length = 1241

 Score = 38.5 bits (88), Expect = 0.009
 Identities = 27/70 (38%), Positives = 31/70 (44%), Gaps = 13/70 (18%)

Query: 7   RLSLEAPGPAPFREAPP-----------AEELPAPVVPCVQG--GGDGGGASETPSPDAQ 53
           R S  +P P P +EA P            EE  A  V    G  GGD GGAS  P P AQ
Sbjct: 168 RTSPSSPAPLPHQEATPRASKGAQAGTQVEEAEAEAVAVASGTAGGDDGGASGRPLPKAQ 227

Query: 54  LGDRPLSPKE 63
            G R  + +E
Sbjct: 228 PGHRSYNLQE 237


>gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo
           sapiens]
          Length = 2524

 Score = 38.5 bits (88), Expect = 0.009
 Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 7/69 (10%)

Query: 9   SLEAPGPAPFREAPPAEELPAPVVPCVQGGGDGGGASETPSPDAQLGDRPLSPKEE---- 64
           +L A GP P    PP E++PAP  P        G  +  P+P +     P+ PKEE    
Sbjct: 772 TLGADGPPPGPPTPPPEDIPAPTEP-TPASEATGAPTPPPAPPSPSAPPPVVPKEEKEEE 830

Query: 65  --AAPQEQE 71
             AAP  +E
Sbjct: 831 TAAAPPVEE 839


>gi|156416026 zinc finger protein 219 [Homo sapiens]
          Length = 722

 Score = 38.5 bits (88), Expect = 0.009
 Identities = 45/166 (27%), Positives = 61/166 (36%), Gaps = 28/166 (16%)

Query: 2   EPIGARLSLEAPGPAPFREAPPAEELPAPVVPCVQGGGDGGGASETPSPDAQLGD-RPLS 60
           EP+G  L L AP P P     P   L    +   +G  +G GA   P P    G  RPLS
Sbjct: 355 EPLGPALLL-APAPTPAERREPPSLLGYLSLRAGEGRPNGEGAE--PGPGRSFGGFRPLS 411

Query: 61  PKEEAA--------PQEQEELLECRRRCRARSFSL----------------PADPILQAA 96
               A         P+E+EE++E      AR  SL                 A      A
Sbjct: 412 SALPARARRHRAEEPEEEEEVVEAEEETWARGRSLGSLASLHPRPGEGPGHSASAAGAQA 471

Query: 97  KFLQQQQQQAVALGGEGAEDAQLGPGGCCAKCKKRVQFADTLGLSL 142
           +    Q++  + +GG   E  +   G  C  C K  + A  L + L
Sbjct: 472 RSTATQEENGLLVGGTRPEGGRGATGKDCPFCGKSFRSAHHLKVHL 517


>gi|156415998 zinc finger protein 219 [Homo sapiens]
          Length = 722

 Score = 38.5 bits (88), Expect = 0.009
 Identities = 45/166 (27%), Positives = 61/166 (36%), Gaps = 28/166 (16%)

Query: 2   EPIGARLSLEAPGPAPFREAPPAEELPAPVVPCVQGGGDGGGASETPSPDAQLGD-RPLS 60
           EP+G  L L AP P P     P   L    +   +G  +G GA   P P    G  RPLS
Sbjct: 355 EPLGPALLL-APAPTPAERREPPSLLGYLSLRAGEGRPNGEGAE--PGPGRSFGGFRPLS 411

Query: 61  PKEEAA--------PQEQEELLECRRRCRARSFSL----------------PADPILQAA 96
               A         P+E+EE++E      AR  SL                 A      A
Sbjct: 412 SALPARARRHRAEEPEEEEEVVEAEEETWARGRSLGSLASLHPRPGEGPGHSASAAGAQA 471

Query: 97  KFLQQQQQQAVALGGEGAEDAQLGPGGCCAKCKKRVQFADTLGLSL 142
           +    Q++  + +GG   E  +   G  C  C K  + A  L + L
Sbjct: 472 RSTATQEENGLLVGGTRPEGGRGATGKDCPFCGKSFRSAHHLKVHL 517


>gi|156415996 zinc finger protein 219 [Homo sapiens]
          Length = 722

 Score = 38.5 bits (88), Expect = 0.009
 Identities = 45/166 (27%), Positives = 61/166 (36%), Gaps = 28/166 (16%)

Query: 2   EPIGARLSLEAPGPAPFREAPPAEELPAPVVPCVQGGGDGGGASETPSPDAQLGD-RPLS 60
           EP+G  L L AP P P     P   L    +   +G  +G GA   P P    G  RPLS
Sbjct: 355 EPLGPALLL-APAPTPAERREPPSLLGYLSLRAGEGRPNGEGAE--PGPGRSFGGFRPLS 411

Query: 61  PKEEAA--------PQEQEELLECRRRCRARSFSL----------------PADPILQAA 96
               A         P+E+EE++E      AR  SL                 A      A
Sbjct: 412 SALPARARRHRAEEPEEEEEVVEAEEETWARGRSLGSLASLHPRPGEGPGHSASAAGAQA 471

Query: 97  KFLQQQQQQAVALGGEGAEDAQLGPGGCCAKCKKRVQFADTLGLSL 142
           +    Q++  + +GG   E  +   G  C  C K  + A  L + L
Sbjct: 472 RSTATQEENGLLVGGTRPEGGRGATGKDCPFCGKSFRSAHHLKVHL 517


>gi|148833506 obscurin, cytoskeletal calmodulin and titin-interacting
            RhoGEF isoform b [Homo sapiens]
          Length = 7968

 Score = 38.1 bits (87), Expect = 0.012
 Identities = 36/124 (29%), Positives = 51/124 (41%), Gaps = 14/124 (11%)

Query: 7    RLSLEAPGPAPFREA---PPAEELPAPVVPCVQGGGDGGGASETPSPDAQLGDRP--LSP 61
            RL     G AP R+      +++LP+       GG  G    E PSPD+  G       P
Sbjct: 6984 RLPSAPSGGAPIRDMGHPQGSKQLPST------GGHPGTAQPERPSPDSPWGQPAPFCHP 7037

Query: 62   KEEAAPQEQEELLECRRRCRARSF---SLPADPILQAAKFLQQQQQQAVALGGEGAEDAQ 118
            K+ +APQE          C   SF   S    P++ ++ FL Q Q            D++
Sbjct: 7038 KQGSAPQEGCSPHPAVAPCPPGSFPPGSCKEAPLVPSSPFLGQPQAPPAPAKASPPLDSK 7097

Query: 119  LGPG 122
            +GPG
Sbjct: 7098 MGPG 7101


>gi|122937321 UNC homeobox [Homo sapiens]
          Length = 531

 Score = 37.7 bits (86), Expect = 0.016
 Identities = 22/55 (40%), Positives = 25/55 (45%), Gaps = 1/55 (1%)

Query: 12  APGPAPFREAPPAEELPAPVVPCVQGGGDGGGASETPSPDAQLGDRPLSPKEEAA 66
           AP PAPFR+   A         C   G   G A   P+P  + G RP SP EE A
Sbjct: 454 APAPAPFRDLASAAATEGGGGDCADAG-TAGPAPPPPAPSPRPGPRPPSPAEEPA 507


>gi|55741677 SET domain containing 1A [Homo sapiens]
          Length = 1707

 Score = 37.0 bits (84), Expect = 0.027
 Identities = 21/49 (42%), Positives = 24/49 (48%), Gaps = 7/49 (14%)

Query: 22  PPAEELPAPVVPCVQGGGDGGGASETPSP---DAQLGDRPLSPKEEAAP 67
           PPA E P P  P   GGG GGG    PSP   + +   RP SP    +P
Sbjct: 427 PPASEAPPPEPPEPGGGGGGGG----PSPEREEVRTSPRPASPARSGSP 471


>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
           tract binding protein associated) [Homo sapiens]
          Length = 707

 Score = 37.0 bits (84), Expect = 0.027
 Identities = 22/63 (34%), Positives = 25/63 (39%), Gaps = 6/63 (9%)

Query: 11  EAPGPAP-FREAPPAEELPAPVVPCVQGGGDGGGASETPSP-----DAQLGDRPLSPKEE 64
           + PGPAP    APPA     P  P   G   G G   TP+P      A  G  P +P   
Sbjct: 113 QGPGPAPGVGSAPPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPSS 172

Query: 65  AAP 67
             P
Sbjct: 173 GVP 175


>gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e
           [Homo sapiens]
          Length = 1451

 Score = 36.6 bits (83), Expect = 0.036
 Identities = 68/304 (22%), Positives = 114/304 (37%), Gaps = 42/304 (13%)

Query: 1   MEPIGARLSLEAPGPAPFREAPPAEELPAPVVPCVQGGGDGGGASETPSPDAQLGDRPLS 60
           ++P   + S  +   +P R+A PA      V P V+GG      +  P+  A+  +    
Sbjct: 218 VKPAQVKASSVSTKESPARKAAPAPGKVGDVTPQVKGG------ALPPAKRAKKPEEESE 271

Query: 61  PKEEAAPQEQEELLECRRRCRARSFSLPADPILQAAKFLQQQQQQAVALG--GEGAEDAQ 118
             EE +  E+E     R + +A            + K LQ +   A A G  G+GA  A 
Sbjct: 272 SSEEGSESEEEAPAGTRSQVKA------------SEKILQVRAASAPAKGTPGKGATPAP 319

Query: 119 LGPGGCCAKCKKRVQFADTLGLSLASVKHFSEAEEPQVPPAVLSRLRSFPMRAEDLEQLG 178
            G  G  A   K  +  +    S +S +  S++EE    PA  + L++   +A       
Sbjct: 320 PGKAGAVASQTKAGKPEED---SESSSEESSDSEEE--TPAAKALLQA---KASGKTSQV 371

Query: 179 GLLAAAAVAAP----LSAPPSRLRPLFQLPGPSAAAERLQRQRVCLERVQCSTASGAEVK 234
           G  +A A  +P      APP +  P       + A +R +  +   E       + A+ K
Sbjct: 372 GAASAPAKESPRKGAAPAPPGKTGPAV---AKAQAGKREEDSQSSSEESDSEEEAPAQAK 428

Query: 235 GSGRVLSCPGPRAVTVRYTFTEWRSFLDVPAELQPEPLEPQQPEAPSGASEPGSGDAKKE 294
            SG+    P  RA +     +  +     P    P    P   +   G  E  S  + +E
Sbjct: 429 PSGK---APQVRAASAPAKESPRKGAAPAP----PRKTGPAAAQVQVGKQEEDSRSSSEE 481

Query: 295 PGAE 298
             ++
Sbjct: 482 SDSD 485


>gi|207113160 Treacher Collins-Franceschetti syndrome 1 isoform d
           [Homo sapiens]
          Length = 1488

 Score = 36.6 bits (83), Expect = 0.036
 Identities = 68/304 (22%), Positives = 114/304 (37%), Gaps = 42/304 (13%)

Query: 1   MEPIGARLSLEAPGPAPFREAPPAEELPAPVVPCVQGGGDGGGASETPSPDAQLGDRPLS 60
           ++P   + S  +   +P R+A PA      V P V+GG      +  P+  A+  +    
Sbjct: 218 VKPAQVKASSVSTKESPARKAAPAPGKVGDVTPQVKGG------ALPPAKRAKKPEEESE 271

Query: 61  PKEEAAPQEQEELLECRRRCRARSFSLPADPILQAAKFLQQQQQQAVALG--GEGAEDAQ 118
             EE +  E+E     R + +A            + K LQ +   A A G  G+GA  A 
Sbjct: 272 SSEEGSESEEEAPAGTRSQVKA------------SEKILQVRAASAPAKGTPGKGATPAP 319

Query: 119 LGPGGCCAKCKKRVQFADTLGLSLASVKHFSEAEEPQVPPAVLSRLRSFPMRAEDLEQLG 178
            G  G  A   K  +  +    S +S +  S++EE    PA  + L++   +A       
Sbjct: 320 PGKAGAVASQTKAGKPEED---SESSSEESSDSEEE--TPAAKALLQA---KASGKTSQV 371

Query: 179 GLLAAAAVAAP----LSAPPSRLRPLFQLPGPSAAAERLQRQRVCLERVQCSTASGAEVK 234
           G  +A A  +P      APP +  P       + A +R +  +   E       + A+ K
Sbjct: 372 GAASAPAKESPRKGAAPAPPGKTGPAV---AKAQAGKREEDSQSSSEESDSEEEAPAQAK 428

Query: 235 GSGRVLSCPGPRAVTVRYTFTEWRSFLDVPAELQPEPLEPQQPEAPSGASEPGSGDAKKE 294
            SG+    P  RA +     +  +     P    P    P   +   G  E  S  + +E
Sbjct: 429 PSGK---APQVRAASAPAKESPRKGAAPAP----PRKTGPAAAQVQVGKQEEDSRSSSEE 481

Query: 295 PGAE 298
             ++
Sbjct: 482 SDSD 485


>gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a
           [Homo sapiens]
          Length = 1450

 Score = 36.6 bits (83), Expect = 0.036
 Identities = 68/304 (22%), Positives = 114/304 (37%), Gaps = 42/304 (13%)

Query: 1   MEPIGARLSLEAPGPAPFREAPPAEELPAPVVPCVQGGGDGGGASETPSPDAQLGDRPLS 60
           ++P   + S  +   +P R+A PA      V P V+GG      +  P+  A+  +    
Sbjct: 218 VKPAQVKASSVSTKESPARKAAPAPGKVGDVTPQVKGG------ALPPAKRAKKPEEESE 271

Query: 61  PKEEAAPQEQEELLECRRRCRARSFSLPADPILQAAKFLQQQQQQAVALG--GEGAEDAQ 118
             EE +  E+E     R + +A            + K LQ +   A A G  G+GA  A 
Sbjct: 272 SSEEGSESEEEAPAGTRSQVKA------------SEKILQVRAASAPAKGTPGKGATPAP 319

Query: 119 LGPGGCCAKCKKRVQFADTLGLSLASVKHFSEAEEPQVPPAVLSRLRSFPMRAEDLEQLG 178
            G  G  A   K  +  +    S +S +  S++EE    PA  + L++   +A       
Sbjct: 320 PGKAGAVASQTKAGKPEED---SESSSEESSDSEEE--TPAAKALLQA---KASGKTSQV 371

Query: 179 GLLAAAAVAAP----LSAPPSRLRPLFQLPGPSAAAERLQRQRVCLERVQCSTASGAEVK 234
           G  +A A  +P      APP +  P       + A +R +  +   E       + A+ K
Sbjct: 372 GAASAPAKESPRKGAAPAPPGKTGPAV---AKAQAGKREEDSQSSSEESDSEEEAPAQAK 428

Query: 235 GSGRVLSCPGPRAVTVRYTFTEWRSFLDVPAELQPEPLEPQQPEAPSGASEPGSGDAKKE 294
            SG+    P  RA +     +  +     P    P    P   +   G  E  S  + +E
Sbjct: 429 PSGK---APQVRAASAPAKESPRKGAAPAP----PRKTGPAAAQVQVGKQEEDSRSSSEE 481

Query: 295 PGAE 298
             ++
Sbjct: 482 SDSD 485


>gi|57164979 Treacher Collins-Franceschetti syndrome 1 isoform c
           [Homo sapiens]
          Length = 958

 Score = 36.6 bits (83), Expect = 0.036
 Identities = 68/304 (22%), Positives = 114/304 (37%), Gaps = 42/304 (13%)

Query: 1   MEPIGARLSLEAPGPAPFREAPPAEELPAPVVPCVQGGGDGGGASETPSPDAQLGDRPLS 60
           ++P   + S  +   +P R+A PA      V P V+GG      +  P+  A+  +    
Sbjct: 218 VKPAQVKASSVSTKESPARKAAPAPGKVGDVTPQVKGG------ALPPAKRAKKPEEESE 271

Query: 61  PKEEAAPQEQEELLECRRRCRARSFSLPADPILQAAKFLQQQQQQAVALG--GEGAEDAQ 118
             EE +  E+E     R + +A            + K LQ +   A A G  G+GA  A 
Sbjct: 272 SSEEGSESEEEAPAGTRSQVKA------------SEKILQVRAASAPAKGTPGKGATPAP 319

Query: 119 LGPGGCCAKCKKRVQFADTLGLSLASVKHFSEAEEPQVPPAVLSRLRSFPMRAEDLEQLG 178
            G  G  A   K  +  +    S +S +  S++EE    PA  + L++   +A       
Sbjct: 320 PGKAGAVASQTKAGKPEED---SESSSEESSDSEEE--TPAAKALLQA---KASGKTSQV 371

Query: 179 GLLAAAAVAAP----LSAPPSRLRPLFQLPGPSAAAERLQRQRVCLERVQCSTASGAEVK 234
           G  +A A  +P      APP +  P       + A +R +  +   E       + A+ K
Sbjct: 372 GAASAPAKESPRKGAAPAPPGKTGPAV---AKAQAGKREEDSQSSSEESDSEEEAPAQAK 428

Query: 235 GSGRVLSCPGPRAVTVRYTFTEWRSFLDVPAELQPEPLEPQQPEAPSGASEPGSGDAKKE 294
            SG+    P  RA +     +  +     P    P    P   +   G  E  S  + +E
Sbjct: 429 PSGK---APQVRAASAPAKESPRKGAAPAP----PRKTGPAAAQVQVGKQEEDSRSSSEE 481

Query: 295 PGAE 298
             ++
Sbjct: 482 SDSD 485


>gi|4502737 cyclin-dependent kinase 5, regulatory subunit 1 [Homo
           sapiens]
          Length = 307

 Score = 36.2 bits (82), Expect = 0.047
 Identities = 27/90 (30%), Positives = 36/90 (40%), Gaps = 7/90 (7%)

Query: 9   SLEAPGPAPFREAPPAEELPAPVVPCVQGGGDGGGASETPSPDAQLGDRPLSPKEEAAPQ 68
           SL     + F + PPA+  PAP    + G   GG +S   +P   +     +PK      
Sbjct: 89  SLSCANLSTFAQPPPAQP-PAPPASQLSGSQTGGSSSVKKAPHPAVTSAG-TPKRVIVQA 146

Query: 69  EQEELLECR-----RRCRARSFSLPADPIL 93
              ELL C      RRC       P DP+L
Sbjct: 147 STSELLRCLGEFLCRRCYRLKHLSPTDPVL 176


>gi|169179951 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 196

 Score = 35.8 bits (81), Expect = 0.061
 Identities = 55/206 (26%), Positives = 78/206 (37%), Gaps = 32/206 (15%)

Query: 30  PVVPCVQGGGDGGGASETPSPDAQLGDRPLSPKEEAAPQEQEELLECRRRCRARSFSLPA 89
           PV+P     G GG       P    G +P  P           L +   R R R+++   
Sbjct: 6   PVIPAKGEAGGGGERKRVSPPRTHSGPQPCFPGALKGRGADILLAQTLERIRKRTWAR-- 63

Query: 90  DPILQAAKFLQQQQQQ---AVALGGEGA------EDAQLGPGGCCAKCKKRVQFADTLGL 140
                    ++++ QQ   A ALGG  A      ++A       C       +  +  GL
Sbjct: 64  ---------IEKEAQQIPLAPALGGSSAAVLRRRKEAANSAASSCVSLPGLAR-PEPSGL 113

Query: 141 SLA--SVKHFSEAEEPQVPPAV-----LSRLRSFPMRAEDLEQ-LGGLLAAAAVAAPLSA 192
             A  S  H +  E+P+ P A       SR  ++   ++   Q   G  + AA AAP SA
Sbjct: 114 KEAGNSPNHNNIREQPRRPLAPSHSRGASRTPAWVKCSQRRAQGAQGDTSPAASAAPPSA 173

Query: 193 PPSRLRPLFQLPGPSAAAERLQRQRV 218
           P SRLRP    P P  A     R R+
Sbjct: 174 PESRLRP---RPAPDTAGRGGGRHRL 196


>gi|169218206 PREDICTED: similar to hCG2042704 [Homo sapiens]
          Length = 317

 Score = 35.8 bits (81), Expect = 0.061
 Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 1/90 (1%)

Query: 13  PGPAPFREAPPAEELPAPVVPCVQGGGDGGGASETPSPDAQLGDRPLSPKEEAAPQEQEE 72
           P P PFR   P   L     P   G G  G  S+ P      G   L   ++   +EQ  
Sbjct: 72  PPPRPFRGRGPHRSLGCDAAPAALGNGRPGARSDRPCGAGGDGGGRLPGDDDDNDEEQPP 131

Query: 73  LLECRRRCRARSFSLP-ADPILQAAKFLQQ 101
            L    RC AR+++   A P+++    LQ+
Sbjct: 132 PLPLTGRCWARAWAREGASPVVEKRCPLQR 161


>gi|169178983 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 196

 Score = 35.8 bits (81), Expect = 0.061
 Identities = 55/206 (26%), Positives = 78/206 (37%), Gaps = 32/206 (15%)

Query: 30  PVVPCVQGGGDGGGASETPSPDAQLGDRPLSPKEEAAPQEQEELLECRRRCRARSFSLPA 89
           PV+P     G GG       P    G +P  P           L +   R R R+++   
Sbjct: 6   PVIPAKGEAGGGGERKRVSPPRTHSGPQPCFPGALKGRGADILLAQTLERIRKRTWAR-- 63

Query: 90  DPILQAAKFLQQQQQQ---AVALGGEGA------EDAQLGPGGCCAKCKKRVQFADTLGL 140
                    ++++ QQ   A ALGG  A      ++A       C       +  +  GL
Sbjct: 64  ---------IEKEAQQIPLAPALGGSSAAVLRRRKEAANSAASSCVSLPGLAR-PEPSGL 113

Query: 141 SLA--SVKHFSEAEEPQVPPAV-----LSRLRSFPMRAEDLEQ-LGGLLAAAAVAAPLSA 192
             A  S  H +  E+P+ P A       SR  ++   ++   Q   G  + AA AAP SA
Sbjct: 114 KEAGNSPNHNNIREQPRRPLAPSHSRGASRTPAWVKCSQRRAQGAQGDTSPAASAAPPSA 173

Query: 193 PPSRLRPLFQLPGPSAAAERLQRQRV 218
           P SRLRP    P P  A     R R+
Sbjct: 174 PESRLRP---RPAPDTAGRGGGRHRL 196


>gi|239743855 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 196

 Score = 35.8 bits (81), Expect = 0.061
 Identities = 55/206 (26%), Positives = 78/206 (37%), Gaps = 32/206 (15%)

Query: 30  PVVPCVQGGGDGGGASETPSPDAQLGDRPLSPKEEAAPQEQEELLECRRRCRARSFSLPA 89
           PV+P     G GG       P    G +P  P           L +   R R R+++   
Sbjct: 6   PVIPAKGEAGGGGERKRVSPPRTHSGPQPCFPGALKGRGADILLAQTLERIRKRTWAR-- 63

Query: 90  DPILQAAKFLQQQQQQ---AVALGGEGA------EDAQLGPGGCCAKCKKRVQFADTLGL 140
                    ++++ QQ   A ALGG  A      ++A       C       +  +  GL
Sbjct: 64  ---------IEKEAQQIPLAPALGGSSAAVLRRRKEAANSAASSCVSLPGLAR-PEPSGL 113

Query: 141 SLA--SVKHFSEAEEPQVPPAV-----LSRLRSFPMRAEDLEQ-LGGLLAAAAVAAPLSA 192
             A  S  H +  E+P+ P A       SR  ++   ++   Q   G  + AA AAP SA
Sbjct: 114 KEAGNSPNHNNIREQPRRPLAPSHSRGASRTPAWVKCSQRRAQGAQGDTSPAASAAPPSA 173

Query: 193 PPSRLRPLFQLPGPSAAAERLQRQRV 218
           P SRLRP    P P  A     R R+
Sbjct: 174 PESRLRP---RPAPDTAGRGGGRHRL 196


>gi|34365793 WNK lysine deficient protein kinase 4 [Homo sapiens]
          Length = 1243

 Score = 35.4 bits (80), Expect = 0.079
 Identities = 27/92 (29%), Positives = 39/92 (42%), Gaps = 10/92 (10%)

Query: 9    SLEAPGPAPFREAPPAEELPAPVVPCVQGGGDGGGASETPSPDAQLGD--------RPLS 60
            SL +P P    ++PPA   P P +P       GG   E+PSP     +        RPL 
Sbjct: 940  SLLSPSPGLLSQSPPAPPSPLPSLPLPPPVAPGG--QESPSPHTAEVESEASPPPARPLP 997

Query: 61   PKEEAAPQEQEELLECRRRCRARSFSLPADPI 92
             +   AP  +E   +   R +  S   PA+P+
Sbjct: 998  GEARLAPISEEGKPQLVGRFQVTSSKEPAEPL 1029


>gi|157266334 tubby like protein 1 [Homo sapiens]
          Length = 542

 Score = 35.4 bits (80), Expect = 0.079
 Identities = 41/159 (25%), Positives = 61/159 (38%), Gaps = 13/159 (8%)

Query: 168 PMRAEDLEQLGGLLAAAAVAAPLSAPPSRLRPLFQLPGPSAAAERLQRQRVCLERVQCST 227
           P+R E L ++    A+ +     S  P   R   Q P P   A+RL+++R       C T
Sbjct: 2   PLRDETLREVW---ASDSGHEEESLSPEAPRRPKQRPAP---AQRLRKKRTEAPESPCPT 55

Query: 228 ASGAEVKGSGRV---LSCPGPRAVTVRYTFTEWRSFLDVPAELQPEPLE----PQQPEAP 280
            S     G+GR       P P     R   T +  FL  P   + +P E     + P+A 
Sbjct: 56  GSKPRKPGAGRTGRPREEPSPDPAQARAPQTVYARFLRDPEAKKRDPRETFLVARAPDAE 115

Query: 281 SGASEPGSGDAKKEPGAECFHFSLCLPPGLQPEDEEDAD 319
               E    +  +E  AE     + LPP     ++  AD
Sbjct: 116 DEEEEEEEDEEDEEEEAEEKKEKILLPPKKPLREKSSAD 154


>gi|56549129 transmembrane anchor protein 1 isoform 3 [Homo sapiens]
          Length = 170

 Score = 35.0 bits (79), Expect = 0.10
 Identities = 31/79 (39%), Positives = 32/79 (40%), Gaps = 12/79 (15%)

Query: 5   GARLSLEAPGPAPFREAPPAEE--LPAPVVPCVQGGGDGGGASETPSPDAQLGD--RPLS 60
           GA  S E P  AP   APPAE    PAP  PC           E P   A LG+   P  
Sbjct: 30  GAAASPE-PARAPPEPAPPAEATGAPAPSRPCAPEPAASPAGPEEPGEPAGLGELGEPAG 88

Query: 61  PKE-------EAAPQEQEE 72
           P E        AAP E EE
Sbjct: 89  PGEPEGPGDPAAAPAEAEE 107


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.133    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,687,446
Number of Sequences: 37866
Number of extensions: 1147597
Number of successful extensions: 6226
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 249
Number of HSP's that attempted gapping in prelim test: 5788
Number of HSP's gapped (non-prelim): 682
length of query: 358
length of database: 18,247,518
effective HSP length: 103
effective length of query: 255
effective length of database: 14,347,320
effective search space: 3658566600
effective search space used: 3658566600
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.