Guide to the Human Genome
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Name: ZNF493 Sequence: fasta or formatted (103aa) NCBI GI: 222418654
Description:

zinc finger protein 493 isoform 2

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [646aa] zinc finger protein 493 isoform 1
alt prot [774aa] zinc finger protein 493 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.9          4           1
 C cysteine            1.9          2           1
 D aspartate           6.8          7           1
 E glutamate           6.8          7           2
 F phenylalanine       4.9          5           1
 G glycine             6.8          7           1
 H histidine           1.9          2           1
 I isoleucine          1.9          2           1
 K lysine              4.9          5           1
 L leucine            12.6         13           2
 M methionine          3.9          4           1
 N asparagine          2.9          3           1
 P proline             7.8          8           2
 Q glutamine           4.9          5           2
 R arginine            3.9          4           1
 S serine              5.8          6           1
 T threonine           5.8          6           1
 V valine              7.8          8           2
 W tryptophan          1.9          2           1
 Y tyrosine            2.9          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 493 isoform 2 
ZNF493                0.786   zinc finger protein 493 isoform 3 
ZNF430                0.651   zinc finger protein 430 
ZNF680                0.646   zinc finger protein 680 isoform 1 
ZNF680                0.635   zinc finger protein 680 isoform 2 
ZNF273                0.625   zinc finger protein 273 
ZNF98                 0.625   zinc finger protein 98 
ZNF100                0.615   zinc finger protein 100 
ZNF254                0.609   zinc finger protein 254 
LOC730110             0.568   PREDICTED: Zinc finger protein ENSP00000351689 [Hom...
LOC730110             0.568   PREDICTED: Zinc finger protein ENSP00000351689 [Hom...
LOC730110             0.568   PREDICTED: Zinc finger protein ENSP00000351689 [Hom...
ZNF91                 0.568   zinc finger protein 91 
LOC646864             0.552   PREDICTED: similar to hCG36734 
LOC100130518          0.552   PREDICTED: similar to Zinc finger protein ENSP00000...
LOC646864             0.552   PREDICTED: similar to hCG36734 
LOC100130518          0.552   PREDICTED: similar to Zinc finger protein ENSP00000...
LOC646864             0.552   PREDICTED: similar to hCG36734 
LOC100130518          0.552   PREDICTED: similar to Zinc finger protein ENSP00000...
ZNF708                0.552   zinc finger protein 708 
ZNF257                0.547   zinc finger protein 257 
ZNF730                0.547   PREDICTED: zinc finger protein 730 
ZNF730                0.547   PREDICTED: zinc finger protein 730 
ZNF730                0.547   PREDICTED: zinc finger protein 730 
ZNF679                0.542   zinc finger protein 679 
ZNF92                 0.542   zinc finger protein 92 isoform 2 
ZNF726                0.542   PREDICTED: zinc finger protein 726 
ZNF726                0.542   PREDICTED: zinc finger protein 726 
ZNF726                0.542   PREDICTED: zinc finger protein 726 
ZNF85                 0.536   zinc finger protein 85 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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