Guide to the Human Genome
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Name: ZNF680 Sequence: fasta or formatted (123aa) NCBI GI: 194097409
Description:

zinc finger protein 680 isoform 2

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [530aa] zinc finger protein 680 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3          9           1
 C cysteine            3.3          4           1
 D aspartate           3.3          4           1
 E glutamate           8.1         10           2
 F phenylalanine       3.3          4           1
 G glycine             4.1          5           1
 H histidine           0.8          1           1
 I isoleucine          2.4          3           1
 K lysine              4.9          6           1
 L leucine            13.0         16           2
 M methionine          4.9          6           1
 N asparagine          4.9          6           2
 P proline             7.3          9           2
 Q glutamine           4.9          6           1
 R arginine            5.7          7           1
 S serine              5.7          7           2
 T threonine           4.1          5           1
 V valine              5.7          7           1
 W tryptophan          2.4          3           1
 Y tyrosine            4.1          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 680 isoform 2 
ZNF680                0.672   zinc finger protein 680 isoform 1 
ZNF98                 0.556   zinc finger protein 98 
ZNF493                0.543   zinc finger protein 493 isoform 3 
ZNF273                0.539   zinc finger protein 273 
ZNF493                0.526   zinc finger protein 493 isoform 2 
ZNF254                0.522   zinc finger protein 254 
ZNF726                0.509   PREDICTED: zinc finger protein 726 
ZNF726                0.509   PREDICTED: zinc finger protein 726 
ZNF726                0.509   PREDICTED: zinc finger protein 726 
ZNF91                 0.500   zinc finger protein 91 
ZNF679                0.491   zinc finger protein 679 
ZNF479                0.491   zinc finger protein 479 
ZNF430                0.487   zinc finger protein 430 
ZNF716                0.483   zinc finger protein 716 
ZNF716                0.483   PREDICTED: zinc finger protein 716 
ZNF716                0.483   PREDICTED: zinc finger protein 716 
ZNF716                0.483   PREDICTED: zinc finger protein 716 
ZNF66                 0.483   PREDICTED: zinc finger protein 66 
LOC730110             0.483   PREDICTED: Zinc finger protein ENSP00000351689 [Hom...
ZNF66                 0.483   PREDICTED: zinc finger protein 66 
LOC730110             0.483   PREDICTED: Zinc finger protein ENSP00000351689 [Hom...
ZNF66                 0.483   PREDICTED: zinc finger protein 66 
LOC730110             0.483   PREDICTED: Zinc finger protein ENSP00000351689 [Hom...
ZNF708                0.478   zinc finger protein 708 
ZNF100                0.478   zinc finger protein 100 
ZNF92                 0.474   zinc finger protein 92 isoform 2 
LOC100130518          0.474   PREDICTED: similar to Zinc finger protein ENSP00000...
LOC100130518          0.474   PREDICTED: similar to Zinc finger protein ENSP00000...
LOC100130518          0.474   PREDICTED: similar to Zinc finger protein ENSP00000...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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