Guide to the Human Genome
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Name: RABAC1 Sequence: fasta or formatted (185aa) NCBI GI: 222144309
Description:

Rab acceptor 1

Referenced in:

Rab

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.3         19           2
 C cysteine            1.6          3           1
 D aspartate           2.2          4           1
 E glutamate           6.5         12           2
 F phenylalanine       6.5         12           2
 G glycine             8.1         15           2
 H histidine           1.6          3           1
 I isoleucine          3.8          7           1
 K lysine              2.2          4           1
 L leucine            13.0         24           2
 M methionine          1.6          3           1
 N asparagine          1.6          3           1
 P proline             4.3          8           1
 Q glutamine           5.4         10           2
 R arginine            6.5         12           3
 S serine              5.9         11           1
 T threonine           3.8          7           2
 V valine              9.2         17           2
 W tryptophan          2.2          4           1
 Y tyrosine            3.8          7           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Rab acceptor 1 
PRAF2                 0.037   PRA1 domain family, member 2 
ARL6IP5               0.035   ADP-ribosylation-like factor 6 interacting protein 5 ...
FFAR3                 0.012   free fatty acid receptor 3 
OR6P1                 0.009   olfactory receptor, family 6, subfamily P, member 1...
LOC100293902          0.009   PREDICTED: similar to hCG1986016 
LOC100290409          0.009   PREDICTED: hypothetical protein XP_002347745 
LOC100288822          0.009   PREDICTED: hypothetical protein XP_002343515 
C1orf38               0.009   basement membrane-induced gene isoform 3 
MC3R                  0.006   melanocortin 3 receptor 
TOMM40L               0.006   translocase of outer mitochondrial membrane 40 homol...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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