Guide to the Human Genome
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Search of human proteins with 221316674

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|221316674 flavin containing monooxygenase 5 isoform 2 [Homo
sapiens]
         (464 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|221316674 flavin containing monooxygenase 5 isoform 2 [Homo s...   944   0.0  
gi|221316672 flavin containing monooxygenase 5 isoform 1 [Homo s...   853   0.0  
gi|221316678 flavin containing monooxygenase 5 isoform 3 [Homo s...   579   e-165
gi|4503757 flavin containing monooxygenase 2 (non-functional) [H...   548   e-156
gi|50541961 flavin containing monooxygenase 3 isoform 2 [Homo sa...   494   e-140
gi|50541965 flavin containing monooxygenase 3 isoform 1 [Homo sa...   494   e-140
gi|4503759 flavin containing monooxygenase 4 [Homo sapiens]           484   e-137
gi|4503755 flavin containing monooxygenase 1 [Homo sapiens]           478   e-135
gi|156139141 FAD-dependent oxidoreductase domain containing 2 [H...    47   5e-05
gi|156139139 FAD-dependent oxidoreductase domain containing 2 [H...    47   5e-05
gi|4557735 monoamine oxidase A [Homo sapiens]                          37   0.050
gi|38202207 monoamine oxidase B [Homo sapiens]                         35   0.14 
gi|170172518 microtubule associated monoxygenase, calponin and L...    31   2.1  
gi|209862793 microtubule associated monoxygenase, calponin and L...    31   2.1  
gi|209862789 microtubule associated monoxygenase, calponin and L...    31   2.1  
gi|28559080 spermine oxidase isoform 4 [Homo sapiens]                  31   2.7  
gi|28559078 spermine oxidase isoform 3 [Homo sapiens]                  31   2.7  
gi|28559076 spermine oxidase isoform 2 [Homo sapiens]                  31   2.7  
gi|28559074 spermine oxidase isoform 1 [Homo sapiens]                  31   2.7  
gi|58761544 amine oxidase (flavin containing) domain 2 isoform a...    30   4.6  
gi|58761546 amine oxidase (flavin containing) domain 2 isoform b...    30   4.6  
gi|169172639 PREDICTED: similar to U5 snRNP-associated 102 kDa p...    30   6.1  
gi|40807485 PRP6 pre-mRNA processing factor 6 homolog [Homo sapi...    30   6.1  

>gi|221316674 flavin containing monooxygenase 5 isoform 2 [Homo
           sapiens]
          Length = 464

 Score =  944 bits (2440), Expect = 0.0
 Identities = 464/464 (100%), Positives = 464/464 (100%)

Query: 1   MTKKRIAVIGGGVSGLSSIKCCVEEGLEPVCFERTDDIGGLWRFQENPEEGRASIYKSVI 60
           MTKKRIAVIGGGVSGLSSIKCCVEEGLEPVCFERTDDIGGLWRFQENPEEGRASIYKSVI
Sbjct: 1   MTKKRIAVIGGGVSGLSSIKCCVEEGLEPVCFERTDDIGGLWRFQENPEEGRASIYKSVI 60

Query: 61  INTSKEMMCFSDYPIPDHYPNFMHNAQVLEYFRMYAKEFDLLKYIRFKTTVCSVKKQPDF 120
           INTSKEMMCFSDYPIPDHYPNFMHNAQVLEYFRMYAKEFDLLKYIRFKTTVCSVKKQPDF
Sbjct: 61  INTSKEMMCFSDYPIPDHYPNFMHNAQVLEYFRMYAKEFDLLKYIRFKTTVCSVKKQPDF 120

Query: 121 ATSGQWEVVTESEGKKEMNVFDGVMVCTGHHTNAHLPLESFPGIEKFKGQYFHSRDYKNP 180
           ATSGQWEVVTESEGKKEMNVFDGVMVCTGHHTNAHLPLESFPGIEKFKGQYFHSRDYKNP
Sbjct: 121 ATSGQWEVVTESEGKKEMNVFDGVMVCTGHHTNAHLPLESFPGIEKFKGQYFHSRDYKNP 180

Query: 181 EGFTGKRVIIIGIGNSGGDLAVEISQTAKQVFLSTRRGAWILNRVGDYGYPADVLFSSRL 240
           EGFTGKRVIIIGIGNSGGDLAVEISQTAKQVFLSTRRGAWILNRVGDYGYPADVLFSSRL
Sbjct: 181 EGFTGKRVIIIGIGNSGGDLAVEISQTAKQVFLSTRRGAWILNRVGDYGYPADVLFSSRL 240

Query: 241 THFIWKICGQSLANKYLEKKINQRFDHEMFGLKPKHRALSQHPTLNDDLPNRIISGLVKV 300
           THFIWKICGQSLANKYLEKKINQRFDHEMFGLKPKHRALSQHPTLNDDLPNRIISGLVKV
Sbjct: 241 THFIWKICGQSLANKYLEKKINQRFDHEMFGLKPKHRALSQHPTLNDDLPNRIISGLVKV 300

Query: 301 KGNVKEFTETAAIFEDGSREDDIDAVIFATGYSFDFPFLEDSVKVVKNKISLYKKVFPPN 360
           KGNVKEFTETAAIFEDGSREDDIDAVIFATGYSFDFPFLEDSVKVVKNKISLYKKVFPPN
Sbjct: 301 KGNVKEFTETAAIFEDGSREDDIDAVIFATGYSFDFPFLEDSVKVVKNKISLYKKVFPPN 360

Query: 361 LERPTLAIIGLIQPLGAIMPISELQGRWATQVFKGLKTLPSQSEMMAEISKAQEEIDKSL 420
           LERPTLAIIGLIQPLGAIMPISELQGRWATQVFKGLKTLPSQSEMMAEISKAQEEIDKSL
Sbjct: 361 LERPTLAIIGLIQPLGAIMPISELQGRWATQVFKGLKTLPSQSEMMAEISKAQEEIDKSL 420

Query: 421 TMRKTSDKPKLKNILQIPDYLKTVKIINKESLRNCPGIKGPKET 464
           TMRKTSDKPKLKNILQIPDYLKTVKIINKESLRNCPGIKGPKET
Sbjct: 421 TMRKTSDKPKLKNILQIPDYLKTVKIINKESLRNCPGIKGPKET 464


>gi|221316672 flavin containing monooxygenase 5 isoform 1 [Homo
           sapiens]
          Length = 533

 Score =  853 bits (2203), Expect = 0.0
 Identities = 418/418 (100%), Positives = 418/418 (100%)

Query: 1   MTKKRIAVIGGGVSGLSSIKCCVEEGLEPVCFERTDDIGGLWRFQENPEEGRASIYKSVI 60
           MTKKRIAVIGGGVSGLSSIKCCVEEGLEPVCFERTDDIGGLWRFQENPEEGRASIYKSVI
Sbjct: 1   MTKKRIAVIGGGVSGLSSIKCCVEEGLEPVCFERTDDIGGLWRFQENPEEGRASIYKSVI 60

Query: 61  INTSKEMMCFSDYPIPDHYPNFMHNAQVLEYFRMYAKEFDLLKYIRFKTTVCSVKKQPDF 120
           INTSKEMMCFSDYPIPDHYPNFMHNAQVLEYFRMYAKEFDLLKYIRFKTTVCSVKKQPDF
Sbjct: 61  INTSKEMMCFSDYPIPDHYPNFMHNAQVLEYFRMYAKEFDLLKYIRFKTTVCSVKKQPDF 120

Query: 121 ATSGQWEVVTESEGKKEMNVFDGVMVCTGHHTNAHLPLESFPGIEKFKGQYFHSRDYKNP 180
           ATSGQWEVVTESEGKKEMNVFDGVMVCTGHHTNAHLPLESFPGIEKFKGQYFHSRDYKNP
Sbjct: 121 ATSGQWEVVTESEGKKEMNVFDGVMVCTGHHTNAHLPLESFPGIEKFKGQYFHSRDYKNP 180

Query: 181 EGFTGKRVIIIGIGNSGGDLAVEISQTAKQVFLSTRRGAWILNRVGDYGYPADVLFSSRL 240
           EGFTGKRVIIIGIGNSGGDLAVEISQTAKQVFLSTRRGAWILNRVGDYGYPADVLFSSRL
Sbjct: 181 EGFTGKRVIIIGIGNSGGDLAVEISQTAKQVFLSTRRGAWILNRVGDYGYPADVLFSSRL 240

Query: 241 THFIWKICGQSLANKYLEKKINQRFDHEMFGLKPKHRALSQHPTLNDDLPNRIISGLVKV 300
           THFIWKICGQSLANKYLEKKINQRFDHEMFGLKPKHRALSQHPTLNDDLPNRIISGLVKV
Sbjct: 241 THFIWKICGQSLANKYLEKKINQRFDHEMFGLKPKHRALSQHPTLNDDLPNRIISGLVKV 300

Query: 301 KGNVKEFTETAAIFEDGSREDDIDAVIFATGYSFDFPFLEDSVKVVKNKISLYKKVFPPN 360
           KGNVKEFTETAAIFEDGSREDDIDAVIFATGYSFDFPFLEDSVKVVKNKISLYKKVFPPN
Sbjct: 301 KGNVKEFTETAAIFEDGSREDDIDAVIFATGYSFDFPFLEDSVKVVKNKISLYKKVFPPN 360

Query: 361 LERPTLAIIGLIQPLGAIMPISELQGRWATQVFKGLKTLPSQSEMMAEISKAQEEIDK 418
           LERPTLAIIGLIQPLGAIMPISELQGRWATQVFKGLKTLPSQSEMMAEISKAQEEIDK
Sbjct: 361 LERPTLAIIGLIQPLGAIMPISELQGRWATQVFKGLKTLPSQSEMMAEISKAQEEIDK 418


>gi|221316678 flavin containing monooxygenase 5 isoform 3 [Homo
           sapiens]
          Length = 285

 Score =  579 bits (1493), Expect = e-165
 Identities = 277/278 (99%), Positives = 278/278 (100%)

Query: 1   MTKKRIAVIGGGVSGLSSIKCCVEEGLEPVCFERTDDIGGLWRFQENPEEGRASIYKSVI 60
           MTKKRIAVIGGGVSGLSSIKCCVEEGLEPVCFERTDDIGGLWRFQENPEEGRASIYKSVI
Sbjct: 1   MTKKRIAVIGGGVSGLSSIKCCVEEGLEPVCFERTDDIGGLWRFQENPEEGRASIYKSVI 60

Query: 61  INTSKEMMCFSDYPIPDHYPNFMHNAQVLEYFRMYAKEFDLLKYIRFKTTVCSVKKQPDF 120
           INTSKEMMCFSDYPIPDHYPNFMHNAQVLEYFRMYAKEFDLLKYIRFKTTVCSVKKQPDF
Sbjct: 61  INTSKEMMCFSDYPIPDHYPNFMHNAQVLEYFRMYAKEFDLLKYIRFKTTVCSVKKQPDF 120

Query: 121 ATSGQWEVVTESEGKKEMNVFDGVMVCTGHHTNAHLPLESFPGIEKFKGQYFHSRDYKNP 180
           ATSGQWEVVTESEGKKEMNVFDGVMVCTGHHTNAHLPLESFPGIEKFKGQYFHSRDYKNP
Sbjct: 121 ATSGQWEVVTESEGKKEMNVFDGVMVCTGHHTNAHLPLESFPGIEKFKGQYFHSRDYKNP 180

Query: 181 EGFTGKRVIIIGIGNSGGDLAVEISQTAKQVFLSTRRGAWILNRVGDYGYPADVLFSSRL 240
           EGFTGKRVIIIGIGNSGGDLAVEISQTAKQVFLSTRRGAWILNRVGDYGYPADVLFSSRL
Sbjct: 181 EGFTGKRVIIIGIGNSGGDLAVEISQTAKQVFLSTRRGAWILNRVGDYGYPADVLFSSRL 240

Query: 241 THFIWKICGQSLANKYLEKKINQRFDHEMFGLKPKHRA 278
           THFIWKICGQSLANKYLEKKINQRFDHEMFGLKPKHR+
Sbjct: 241 THFIWKICGQSLANKYLEKKINQRFDHEMFGLKPKHRS 278


>gi|4503757 flavin containing monooxygenase 2 (non-functional) [Homo
           sapiens]
          Length = 471

 Score =  548 bits (1413), Expect = e-156
 Identities = 248/413 (60%), Positives = 339/413 (82%), Gaps = 1/413 (0%)

Query: 4   KRIAVIGGGVSGLSSIKCCVEEGLEPVCFERTDDIGGLWRFQENPEEGRASIYKSVIINT 63
           K++AVIG GVSGL S+KCCV+EGLEP CFERT+DIGG+WRF+EN E+GRASIY+SV+ NT
Sbjct: 3   KKVAVIGAGVSGLISLKCCVDEGLEPTCFERTEDIGGVWRFKENVEDGRASIYQSVVTNT 62

Query: 64  SKEMMCFSDYPIPDHYPNFMHNAQVLEYFRMYAKEFDLLKYIRFKTTVCSVKKQPDFATS 123
           SKEM CFSD+P+P+ +PNF+HN+++LEYFR++AK+FDLLKYI+F+TTV SV+K PDF++S
Sbjct: 63  SKEMSCFSDFPMPEDFPNFLHNSKLLEYFRIFAKKFDLLKYIQFQTTVLSVRKCPDFSSS 122

Query: 124 GQWEVVTESEGKKEMNVFDGVMVCTGHHTNAHLPLESFPGIEKFKGQYFHSRDYKNPEGF 183
           GQW+VVT+S GK++  VFD VMVC+GHH   H+PL+SFPG+E+FKGQYFHSR YK+P+GF
Sbjct: 123 GQWKVVTQSNGKEQSAVFDAVMVCSGHHILPHIPLKSFPGMERFKGQYFHSRQYKHPDGF 182

Query: 184 TGKRVIIIGIGNSGGDLAVEISQTAKQVFLSTRRGAWILNRVGDYGYPADVLFSSRLTHF 243
            GKR+++IG+GNSG D+AVE+S+ A QVF+STR G W+++R+ + GYP D +F +R    
Sbjct: 183 EGKRILVIGMGNSGSDIAVELSKNAAQVFISTRHGTWVMSRISEDGYPWDSVFHTRFRSM 242

Query: 244 IWKICGQSLANKYLEKKINQRFDHEMFGLKPKHRALSQHPTLNDDLPNRIISGLVKVKGN 303
           +  +  ++     +E+++N+ F+HE +GL+P+++ + + P LNDD+P+R++ G +KVK  
Sbjct: 243 LRNVLPRTAVKWMIEQQMNRWFNHENYGLEPQNKYIMKEPVLNDDVPSRLLCGAIKVKST 302

Query: 304 VKEFTETAAIFEDGSREDDIDAVIFATGYSFDFPFLEDS-VKVVKNKISLYKKVFPPNLE 362
           VKE TET+AIFEDG+ E++ID +IFATGYSF FPFLEDS VKV  N +SLYK +FP +L+
Sbjct: 303 VKELTETSAIFEDGTVEENIDVIIFATGYSFSFPFLEDSLVKVENNMVSLYKYIFPAHLD 362

Query: 363 RPTLAIIGLIQPLGAIMPISELQGRWATQVFKGLKTLPSQSEMMAEISKAQEE 415
           + TLA IGLIQPLG+I P +ELQ RW T+VFKGL +LPS+  MM +I K  E+
Sbjct: 363 KSTLACIGLIQPLGSIFPTAELQARWVTRVFKGLCSLPSERTMMMDIIKRNEK 415


>gi|50541961 flavin containing monooxygenase 3 isoform 2 [Homo
           sapiens]
          Length = 532

 Score =  494 bits (1273), Expect = e-140
 Identities = 235/413 (56%), Positives = 312/413 (75%), Gaps = 1/413 (0%)

Query: 4   KRIAVIGGGVSGLSSIKCCVEEGLEPVCFERTDDIGGLWRFQENPEEGRASIYKSVIINT 63
           K++A+IG GVSGL+SI+ C+EEGLEP CFE+++DIGGLW+F ++ EEGRASIYKSV  N+
Sbjct: 3   KKVAIIGAGVSGLASIRSCLEEGLEPTCFEKSNDIGGLWKFSDHAEEGRASIYKSVFSNS 62

Query: 64  SKEMMCFSDYPIPDHYPNFMHNAQVLEYFRMYAKEFDLLKYIRFKTTVCSVKKQPDFATS 123
           SKEMMCF D+P PD +PNFMHN+++ EY   +AKE +LLKYI+FKT V SV K PDFAT+
Sbjct: 63  SKEMMCFPDFPFPDDFPNFMHNSKIQEYIIAFAKEKNLLKYIQFKTFVSSVNKHPDFATT 122

Query: 124 GQWEVVTESEGKKEMNVFDGVMVCTGHHTNAHLPLESFPGIEKFKGQYFHSRDYKNPEGF 183
           GQW+V TE +GKKE  VFD VMVC+GHH   +LP ESFPG+  FKG+ FHSRDYK P  F
Sbjct: 123 GQWDVTTERDGKKESAVFDAVMVCSGHHVYPNLPKESFPGLNHFKGKCFHSRDYKEPGVF 182

Query: 184 TGKRVIIIGIGNSGGDLAVEISQTAKQVFLSTRRGAWILNRVGDYGYPADVLFSSRLTHF 243
            GKRV+++G+GNSG D+A E+S+TA+QV +S+R G+W+++RV D GYP D+L  +R   F
Sbjct: 183 NGKRVLVVGLGNSGCDIATELSRTAEQVMISSRSGSWVMSRVWDNGYPWDMLLVTRFGTF 242

Query: 244 IWKICGQSLANKYLEKKINQRFDHEMFGLKPKHRALSQHPTLNDDLPNRIISGLVKVKGN 303
           +      ++++    K++N RF HE +GL P +  L + P  ND+LP  I+ G+V VK N
Sbjct: 243 LKNNLPTAISDWLYVKQMNARFKHENYGLMPLNGVLRKEPVFNDELPASILCGIVSVKPN 302

Query: 304 VKEFTETAAIFEDGSREDDIDAVIFATGYSFDFPFLEDS-VKVVKNKISLYKKVFPPNLE 362
           VKEFTET+AIFEDG+  + ID VIFATGYSF +PFL++S +K   N+I L+K VFPP LE
Sbjct: 303 VKEFTETSAIFEDGTIFEGIDCVIFATGYSFAYPFLDESIIKSRNNEIILFKGVFPPLLE 362

Query: 363 RPTLAIIGLIQPLGAIMPISELQGRWATQVFKGLKTLPSQSEMMAEISKAQEE 415
           + T+A+IG +Q LGA +P  +LQ RWA QV KG  TLPS  +MM +I++  E+
Sbjct: 363 KSTIAVIGFVQSLGAAIPTVDLQSRWAAQVIKGTCTLPSMEDMMNDINEKMEK 415


>gi|50541965 flavin containing monooxygenase 3 isoform 1 [Homo
           sapiens]
          Length = 532

 Score =  494 bits (1273), Expect = e-140
 Identities = 235/413 (56%), Positives = 312/413 (75%), Gaps = 1/413 (0%)

Query: 4   KRIAVIGGGVSGLSSIKCCVEEGLEPVCFERTDDIGGLWRFQENPEEGRASIYKSVIINT 63
           K++A+IG GVSGL+SI+ C+EEGLEP CFE+++DIGGLW+F ++ EEGRASIYKSV  N+
Sbjct: 3   KKVAIIGAGVSGLASIRSCLEEGLEPTCFEKSNDIGGLWKFSDHAEEGRASIYKSVFSNS 62

Query: 64  SKEMMCFSDYPIPDHYPNFMHNAQVLEYFRMYAKEFDLLKYIRFKTTVCSVKKQPDFATS 123
           SKEMMCF D+P PD +PNFMHN+++ EY   +AKE +LLKYI+FKT V SV K PDFAT+
Sbjct: 63  SKEMMCFPDFPFPDDFPNFMHNSKIQEYIIAFAKEKNLLKYIQFKTFVSSVNKHPDFATT 122

Query: 124 GQWEVVTESEGKKEMNVFDGVMVCTGHHTNAHLPLESFPGIEKFKGQYFHSRDYKNPEGF 183
           GQW+V TE +GKKE  VFD VMVC+GHH   +LP ESFPG+  FKG+ FHSRDYK P  F
Sbjct: 123 GQWDVTTERDGKKESAVFDAVMVCSGHHVYPNLPKESFPGLNHFKGKCFHSRDYKEPGVF 182

Query: 184 TGKRVIIIGIGNSGGDLAVEISQTAKQVFLSTRRGAWILNRVGDYGYPADVLFSSRLTHF 243
            GKRV+++G+GNSG D+A E+S+TA+QV +S+R G+W+++RV D GYP D+L  +R   F
Sbjct: 183 NGKRVLVVGLGNSGCDIATELSRTAEQVMISSRSGSWVMSRVWDNGYPWDMLLVTRFGTF 242

Query: 244 IWKICGQSLANKYLEKKINQRFDHEMFGLKPKHRALSQHPTLNDDLPNRIISGLVKVKGN 303
           +      ++++    K++N RF HE +GL P +  L + P  ND+LP  I+ G+V VK N
Sbjct: 243 LKNNLPTAISDWLYVKQMNARFKHENYGLMPLNGVLRKEPVFNDELPASILCGIVSVKPN 302

Query: 304 VKEFTETAAIFEDGSREDDIDAVIFATGYSFDFPFLEDS-VKVVKNKISLYKKVFPPNLE 362
           VKEFTET+AIFEDG+  + ID VIFATGYSF +PFL++S +K   N+I L+K VFPP LE
Sbjct: 303 VKEFTETSAIFEDGTIFEGIDCVIFATGYSFAYPFLDESIIKSRNNEIILFKGVFPPLLE 362

Query: 363 RPTLAIIGLIQPLGAIMPISELQGRWATQVFKGLKTLPSQSEMMAEISKAQEE 415
           + T+A+IG +Q LGA +P  +LQ RWA QV KG  TLPS  +MM +I++  E+
Sbjct: 363 KSTIAVIGFVQSLGAAIPTVDLQSRWAAQVIKGTCTLPSMEDMMNDINEKMEK 415


>gi|4503759 flavin containing monooxygenase 4 [Homo sapiens]
          Length = 558

 Score =  484 bits (1247), Expect = e-137
 Identities = 231/426 (54%), Positives = 315/426 (73%), Gaps = 2/426 (0%)

Query: 4   KRIAVIGGGVSGLSSIKCCVEEGLEPVCFERTDDIGGLWRFQENPEEGRASIYKSVIINT 63
           K++AVIG GVSGLSSIKCCV+E LEP CFER+DDIGGLW+F E+ ++G   +YKS++ N 
Sbjct: 3   KKVAVIGAGVSGLSSIKCCVDEDLEPTCFERSDDIGGLWKFTESSKDGMTRVYKSLVTNV 62

Query: 64  SKEMMCFSDYPIPDHYPNFMHNAQVLEYFRMYAKEFDLLKYIRFKTTVCSVKKQPDFATS 123
            KEM C+SD+P  + YPNFM++ +  +Y + +A+ FDLLKYI+FKTTVCS+ K+PDF+ +
Sbjct: 63  CKEMSCYSDFPFHEDYPNFMNHEKFWDYLQEFAEHFDLLKYIQFKTTVCSITKRPDFSET 122

Query: 124 GQWEVVTESEGKKEMNVFDGVMVCTGHHTNAHLPLESFPGIEKFKGQYFHSRDYKNPEGF 183
           GQW+VVTE+EGK+   VFD VMVCTGH  N HLPLE+FPGI KFKGQ  HS++YK PEGF
Sbjct: 123 GQWDVVTETEGKQNRAVFDAVMVCTGHFLNPHLPLEAFPGIHKFKGQILHSQEYKIPEGF 182

Query: 184 TGKRVIIIGIGNSGGDLAVEISQTAKQVFLSTRRGAWILNRVGDYGYPADVLFSSRLTHF 243
            GKRV++IG+GN+GGD+AVE+S+TA QV LSTR G W+L R  D+GYP +++ + R   F
Sbjct: 183 QGKRVLVIGLGNTGGDIAVELSRTAAQVLLSTRTGTWVLGRSSDWGYPYNMMVTRRCCSF 242

Query: 244 IWKICGQSLANKYLEKKINQRFDHEMFGLKPKHRALSQHPTLNDDLPNRIISGLVKVKGN 303
           I ++      N   E+K+N+RF+HE +GL       ++   +ND+LPN I+ G + +K +
Sbjct: 243 IAQVLPSRFLNWIQERKLNKRFNHEDYGLSITKGKKAKF-IVNDELPNCILCGAITMKTS 301

Query: 304 VKEFTETAAIFEDGSREDDIDAVIFATGYSFDFPFLEDSVK-VVKNKISLYKKVFPPNLE 362
           V EFTET+A+FEDG+ E++ID VIF TGY+F FPF E+ +K +   KI LYK+VFP NLE
Sbjct: 302 VIEFTETSAVFEDGTVEENIDVVIFTTGYTFSFPFFEEPLKSLCTKKIFLYKQVFPLNLE 361

Query: 363 RPTLAIIGLIQPLGAIMPISELQGRWATQVFKGLKTLPSQSEMMAEISKAQEEIDKSLTM 422
           R TLAIIGLI   G+I+  +ELQ RW T+VFKGL  +P   ++M E ++ ++ I + +  
Sbjct: 362 RATLAIIGLIGLKGSILSGTELQARWVTRVFKGLCKIPPSQKLMMEATEKEQLIKRGVFK 421

Query: 423 RKTSDK 428
             + DK
Sbjct: 422 DTSKDK 427


>gi|4503755 flavin containing monooxygenase 1 [Homo sapiens]
          Length = 532

 Score =  478 bits (1231), Expect = e-135
 Identities = 228/412 (55%), Positives = 305/412 (74%), Gaps = 1/412 (0%)

Query: 4   KRIAVIGGGVSGLSSIKCCVEEGLEPVCFERTDDIGGLWRFQENPEEGRASIYKSVIINT 63
           KR+A++G GVSGL+SIKCC+EEGLEP CFER+DD+GGLWRF E+ EEGRAS+YKSV+ N+
Sbjct: 3   KRVAIVGAGVSGLASIKCCLEEGLEPTCFERSDDLGGLWRFTEHVEEGRASLYKSVVSNS 62

Query: 64  SKEMMCFSDYPIPDHYPNFMHNAQVLEYFRMYAKEFDLLKYIRFKTTVCSVKKQPDFATS 123
            KEM C+SD+P P+ YPN++ N+Q LEY +MYA  FDLLK+I+FKT VCSV K  D A S
Sbjct: 63  CKEMSCYSDFPFPEDYPNYVPNSQFLEYLKMYANHFDLLKHIQFKTKVCSVTKCSDSAVS 122

Query: 124 GQWEVVTESEGKKEMNVFDGVMVCTGHHTNAHLPLESFPGIEKFKGQYFHSRDYKNPEGF 183
           GQWEVVT  E K+E  +FD VMVCTG  TN +LPL+SFPGI  FKGQYFHSR YK+P+ F
Sbjct: 123 GQWEVVTMHEEKQESAIFDAVMVCTGFLTNPYLPLDSFPGINAFKGQYFHSRQYKHPDIF 182

Query: 184 TGKRVIIIGIGNSGGDLAVEISQTAKQVFLSTRRGAWILNRVGDYGYPADVLFSSRLTHF 243
             KRV++IG+GNSG D+AVE S  A++VFLST  G W+++R+ D GYP D++F +R  + 
Sbjct: 183 KDKRVLVIGMGNSGTDIAVEASHLAEKVFLSTTGGGWVISRIFDSGYPWDMVFMTRFQNM 242

Query: 244 IWKICGQSLANKYLEKKINQRFDHEMFGLKPKHRALSQHPTLNDDLPNRIISGLVKVKGN 303
           +       +    +E+KIN   +H  +GL P+ R   +   LND+LP RII+G V ++ +
Sbjct: 243 LRNSLPTPIVTWLMERKINNWLNHANYGLIPEDRTQLKEFVLNDELPGRIITGKVFIRPS 302

Query: 304 VKEFTETAAIFEDGSREDDIDAVIFATGYSFDFPFLEDS-VKVVKNKISLYKKVFPPNLE 362
           +KE  E + IF + S+E+ ID ++FATGY+F FPFL++S VKV   + SLYK +FP +L+
Sbjct: 303 IKEVKENSVIFNNTSKEEPIDIIVFATGYTFAFPFLDESVVKVEDGQASLYKYIFPAHLQ 362

Query: 363 RPTLAIIGLIQPLGAIMPISELQGRWATQVFKGLKTLPSQSEMMAEISKAQE 414
           +PTLAIIGLI+PLG+++P  E Q RWA +V KG+  LP  S M+ EI+  +E
Sbjct: 363 KPTLAIIGLIKPLGSMIPTGETQARWAVRVLKGVNKLPPPSVMIEEINARKE 414


>gi|156139141 FAD-dependent oxidoreductase domain containing 2 [Homo
           sapiens]
          Length = 684

 Score = 46.6 bits (109), Expect = 5e-05
 Identities = 60/247 (24%), Positives = 101/247 (40%), Gaps = 40/247 (16%)

Query: 3   KKRIAVIGGGVSGLSSIKCCVEEGLEPVCFERTDDIGGLWRFQENPEEGRA-SIYKSVII 61
           ++   V+G G +GL         G +   FER    G    F   P   +  SI K    
Sbjct: 30  RRDYCVLGAGPAGLQMAYFLQRAGRDYAVFERAPRPGSF--FTRYPRHRKLISINKRYTG 87

Query: 62  NTSKEMMCFSDY-PIPDHYPNFMHNAQVLEYFRMYAKEF-----DLLKY----------- 104
             + E     D+  +  H P  +        FR Y++ +     D+++Y           
Sbjct: 88  KANAEFNLRHDWNSLLSHDPRLL--------FRHYSRAYFPDARDMVRYLGDFADTLGLR 139

Query: 105 IRFKTTVCSVKKQPDF-ATSGQWEVVTESEGKKEMNVFDGVMVCTGHHTNAHLPLESFPG 163
           +++ TT+  V    D  A +G + ++T+ +G  +++    + V TG      +    FPG
Sbjct: 140 VQYNTTIAHVTLDKDRQAWNGHYFILTDQKG--QVHQCSVLFVATGLSVPNQV---DFPG 194

Query: 164 IEKFKGQYFHSRDYKNPEGFTGKRVIIIGIGNSGGDLAVEISQTAKQVFLSTR---RGAW 220
            E  +G    S D   PE F G+ V+I+G GNS  + A  I      + + +R   R +W
Sbjct: 195 SEYAEGYESVSVD---PEDFVGQNVLILGRGNSAFETAENILGVTNFIHMLSRSRVRLSW 251

Query: 221 ILNRVGD 227
             + VGD
Sbjct: 252 ATHYVGD 258


>gi|156139139 FAD-dependent oxidoreductase domain containing 2 [Homo
           sapiens]
          Length = 684

 Score = 46.6 bits (109), Expect = 5e-05
 Identities = 60/247 (24%), Positives = 101/247 (40%), Gaps = 40/247 (16%)

Query: 3   KKRIAVIGGGVSGLSSIKCCVEEGLEPVCFERTDDIGGLWRFQENPEEGRA-SIYKSVII 61
           ++   V+G G +GL         G +   FER    G    F   P   +  SI K    
Sbjct: 30  RRDYCVLGAGPAGLQMAYFLQRAGRDYAVFERAPRPGSF--FTRYPRHRKLISINKRYTG 87

Query: 62  NTSKEMMCFSDY-PIPDHYPNFMHNAQVLEYFRMYAKEF-----DLLKY----------- 104
             + E     D+  +  H P  +        FR Y++ +     D+++Y           
Sbjct: 88  KANAEFNLRHDWNSLLSHDPRLL--------FRHYSRAYFPDARDMVRYLGDFADTLGLR 139

Query: 105 IRFKTTVCSVKKQPDF-ATSGQWEVVTESEGKKEMNVFDGVMVCTGHHTNAHLPLESFPG 163
           +++ TT+  V    D  A +G + ++T+ +G  +++    + V TG      +    FPG
Sbjct: 140 VQYNTTIAHVTLDKDRQAWNGHYFILTDQKG--QVHQCSVLFVATGLSVPNQV---DFPG 194

Query: 164 IEKFKGQYFHSRDYKNPEGFTGKRVIIIGIGNSGGDLAVEISQTAKQVFLSTR---RGAW 220
            E  +G    S D   PE F G+ V+I+G GNS  + A  I      + + +R   R +W
Sbjct: 195 SEYAEGYESVSVD---PEDFVGQNVLILGRGNSAFETAENILGVTNFIHMLSRSRVRLSW 251

Query: 221 ILNRVGD 227
             + VGD
Sbjct: 252 ATHYVGD 258


>gi|4557735 monoamine oxidase A [Homo sapiens]
          Length = 527

 Score = 36.6 bits (83), Expect = 0.050
 Identities = 16/35 (45%), Positives = 22/35 (62%)

Query: 6  IAVIGGGVSGLSSIKCCVEEGLEPVCFERTDDIGG 40
          + VIGGG+SGLS+ K   E G+  +  E  D +GG
Sbjct: 16 VVVIGGGISGLSAAKLLTEYGVSVLVLEARDRVGG 50


>gi|38202207 monoamine oxidase B [Homo sapiens]
          Length = 520

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 14/35 (40%), Positives = 22/35 (62%)

Query: 6  IAVIGGGVSGLSSIKCCVEEGLEPVCFERTDDIGG 40
          + V+GGG+SG+++ K   + GL  V  E  D +GG
Sbjct: 7  VVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGG 41


>gi|170172518 microtubule associated monoxygenase, calponin and LIM
           domain containing 3 isoform 3 [Homo sapiens]
          Length = 966

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 16/51 (31%), Positives = 27/51 (52%)

Query: 175 RDYKNPEGFTGKRVIIIGIGNSGGDLAVEISQTAKQVFLSTRRGAWILNRV 225
           +DYK  +  T  + +IIG G  G   A+++S    +V +  +R A+  N V
Sbjct: 76  KDYKKGKACTNTKCLIIGAGPCGLRTAIDLSLLGAKVVVIEKRDAFSRNNV 126


>gi|209862793 microtubule associated monoxygenase, calponin and LIM
           domain containing 3 isoform 2 [Homo sapiens]
          Length = 1073

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 16/51 (31%), Positives = 27/51 (52%)

Query: 175 RDYKNPEGFTGKRVIIIGIGNSGGDLAVEISQTAKQVFLSTRRGAWILNRV 225
           +DYK  +  T  + +IIG G  G   A+++S    +V +  +R A+  N V
Sbjct: 76  KDYKKGKACTNTKCLIIGAGPCGLRTAIDLSLLGAKVVVIEKRDAFSRNNV 126


>gi|209862789 microtubule associated monoxygenase, calponin and LIM
           domain containing 3 isoform 1 [Homo sapiens]
          Length = 2002

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 16/51 (31%), Positives = 27/51 (52%)

Query: 175 RDYKNPEGFTGKRVIIIGIGNSGGDLAVEISQTAKQVFLSTRRGAWILNRV 225
           +DYK  +  T  + +IIG G  G   A+++S    +V +  +R A+  N V
Sbjct: 76  KDYKKGKACTNTKCLIIGAGPCGLRTAIDLSLLGAKVVVIEKRDAFSRNNV 126


>gi|28559080 spermine oxidase isoform 4 [Homo sapiens]
          Length = 532

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)

Query: 5  RIAVIGGGVSGLSSIKCCVEEGLEPV-CFERTDDIGG 40
          R+ VIG G++GL++ K  +E+G   V   E +  IGG
Sbjct: 26 RVVVIGAGLAGLAAAKALLEQGFTDVTVLEASSHIGG 62


>gi|28559078 spermine oxidase isoform 3 [Homo sapiens]
          Length = 190

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)

Query: 5  RIAVIGGGVSGLSSIKCCVEEGLEPV-CFERTDDIGG 40
          R+ VIG G++GL++ K  +E+G   V   E +  IGG
Sbjct: 26 RVVVIGAGLAGLAAAKALLEQGFTDVTVLEASSHIGG 62


>gi|28559076 spermine oxidase isoform 2 [Homo sapiens]
          Length = 502

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)

Query: 5  RIAVIGGGVSGLSSIKCCVEEGLEPV-CFERTDDIGG 40
          R+ VIG G++GL++ K  +E+G   V   E +  IGG
Sbjct: 26 RVVVIGAGLAGLAAAKALLEQGFTDVTVLEASSHIGG 62


>gi|28559074 spermine oxidase isoform 1 [Homo sapiens]
          Length = 555

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)

Query: 5  RIAVIGGGVSGLSSIKCCVEEGLEPV-CFERTDDIGG 40
          R+ VIG G++GL++ K  +E+G   V   E +  IGG
Sbjct: 26 RVVVIGAGLAGLAAAKALLEQGFTDVTVLEASSHIGG 62


>gi|58761544 amine oxidase (flavin containing) domain 2 isoform a
           [Homo sapiens]
          Length = 876

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 2/41 (4%)

Query: 2   TKK--RIAVIGGGVSGLSSIKCCVEEGLEPVCFERTDDIGG 40
           TKK  ++ +IG GVSGL++ +     G++    E  D +GG
Sbjct: 295 TKKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGG 335


>gi|58761546 amine oxidase (flavin containing) domain 2 isoform b
           [Homo sapiens]
          Length = 852

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 2/41 (4%)

Query: 2   TKK--RIAVIGGGVSGLSSIKCCVEEGLEPVCFERTDDIGG 40
           TKK  ++ +IG GVSGL++ +     G++    E  D +GG
Sbjct: 275 TKKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGG 315


>gi|169172639 PREDICTED: similar to U5 snRNP-associated 102 kDa
           protein [Homo sapiens]
          Length = 406

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 16/61 (26%), Positives = 33/61 (54%)

Query: 394 KGLKTLPSQSEMMAEISKAQEEIDKSLTMRKTSDKPKLKNILQIPDYLKTVKIINKESLR 453
           +GLK  P  + +   +S+ +E+I +    R   +K +LKN      +L++V++  +  L+
Sbjct: 199 QGLKKCPHSTPLWLLLSRLEEKIGQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLK 258

Query: 454 N 454
           N
Sbjct: 259 N 259


>gi|40807485 PRP6 pre-mRNA processing factor 6 homolog [Homo
           sapiens]
          Length = 941

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 16/61 (26%), Positives = 33/61 (54%)

Query: 394 KGLKTLPSQSEMMAEISKAQEEIDKSLTMRKTSDKPKLKNILQIPDYLKTVKIINKESLR 453
           +GLK  P  + +   +S+ +E+I +    R   +K +LKN      +L++V++  +  L+
Sbjct: 734 QGLKKCPHSTPLWLLLSRLEEKIGQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLK 793

Query: 454 N 454
           N
Sbjct: 794 N 794


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.137    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,333,318
Number of Sequences: 37866
Number of extensions: 748537
Number of successful extensions: 1734
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1708
Number of HSP's gapped (non-prelim): 26
length of query: 464
length of database: 18,247,518
effective HSP length: 106
effective length of query: 358
effective length of database: 14,233,722
effective search space: 5095672476
effective search space used: 5095672476
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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