Guide to the Human Genome
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Name: CDS1 Sequence: fasta or formatted (461aa) NCBI GI: 22035624
Description:

CDP-diacylglycerol synthase 1

Referenced in:

Lipid Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.1         19           2
 C cysteine            1.7          8           1
 D aspartate           3.7         17           2
 E glutamate           4.8         22           2
 F phenylalanine       9.3         43           3
 G glycine             6.3         29           2
 H histidine           2.8         13           1
 I isoleucine          7.6         35           2
 K lysine              4.3         20           2
 L leucine            11.3         52           2
 M methionine          2.2         10           1
 N asparagine          1.7          8           1
 P proline             5.0         23           2
 Q glutamine           4.1         19           2
 R arginine            4.8         22           1
 S serine              7.4         34           2
 T threonine           6.1         28           1
 V valine              6.1         28           2
 W tryptophan          1.7          8           2
 Y tyrosine            5.0         23           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   CDP-diacylglycerol synthase 1 
CDS2                  0.708   phosphatidate cytidylyltransferase 2 
NIACR1                0.012   G protein-coupled receptor 109A 
NIACR2                0.011   G protein-coupled receptor 109B 
RNFT1                 0.009   PTD016 protein 
PIK3AP1               0.008   phosphoinositide-3-kinase adaptor protein 1 
MYCN                  0.007   v-myc myelocytomatosis viral related oncogene, neuro...
CYB5A                 0.007   cytochrome b-5 isoform 1 
SLC44A2               0.005   solute carrier family 44, member 2 isoform 1 
SLC44A2               0.005   solute carrier family 44, member 2 isoform 2 
CASZ1                 0.005   castor homolog 1, zinc finger isoform a 
SETD1A                0.005   SET domain containing 1A 
DACT2                 0.005   dapper, antagonist of beta-catenin, homolog 2 [Homo...
TOP2A                 0.004   DNA topoisomerase II, alpha isozyme 
GNAS                  0.004   GNAS complex locus NESP55 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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