Guide to the Human Genome
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Name: NIACR1 Sequence: fasta or formatted (363aa) NCBI GI: 29171311
Description:

G protein-coupled receptor 109A

Referenced in:

G-Protein-coupled Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         18           2
 C cysteine            3.3         12           2
 D aspartate           3.9         14           2
 E glutamate           2.5          9           1
 F phenylalanine       8.8         32           2
 G glycine             4.7         17           2
 H histidine           3.3         12           2
 I isoleucine          8.3         30           2
 K lysine              3.9         14           3
 L leucine            12.1         44           2
 M methionine          3.6         13           1
 N asparagine          5.0         18           2
 P proline             5.0         18           2
 Q glutamine           2.2          8           1
 R arginine            6.1         22           2
 S serine              7.2         26           2
 T threonine           4.4         16           1
 V valine              6.6         24           3
 W tryptophan          2.5          9           1
 Y tyrosine            1.9          7           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   G protein-coupled receptor 109A 
NIACR2                0.948   G protein-coupled receptor 109B 
GPR81                 0.436   G protein-coupled receptor 81 
OXER1                 0.260   G-protein coupled receptor TG1019 
GPR31                 0.226   G protein-coupled receptor 31 
P2RY1                 0.177   purinergic receptor P2Y1 
GPR35                 0.161   G protein-coupled receptor 35 
CYSLTR2               0.158   cysteinyl leukotriene receptor 2 
GPR17                 0.150   G protein-coupled receptor 17 isoform b 
GPR17                 0.150   G protein-coupled receptor 17 isoform b 
GPR17                 0.150   G protein-coupled receptor 17 isoform a 
GPR17                 0.150   G protein-coupled receptor 17 isoform a 
LPAR4                 0.150   lysophosphatidic acid receptor 4 
LPAR6                 0.147   G-protein coupled purinergic receptor P2Y5 
LPAR6                 0.147   G-protein coupled purinergic receptor P2Y5 
LPAR6                 0.147   G-protein coupled purinergic receptor P2Y5 
BDKRB2                0.146   bradykinin receptor B2 
CYSLTR1               0.140   cysteinyl leukotriene receptor 1 
P2RY2                 0.139   purinergic receptor P2Y2 
P2RY2                 0.139   purinergic receptor P2Y2 
P2RY2                 0.139   purinergic receptor P2Y2 
F2RL1                 0.138   coagulation factor II (thrombin) receptor-like 1 pre...
P2RY4                 0.136   pyrimidinergic receptor P2Y4 
SUCNR1                0.135   succinate receptor 1 
PTAFR                 0.135   platelet-activating factor receptor 
P2RY6                 0.133   pyrimidinergic receptor P2Y6 
P2RY6                 0.133   pyrimidinergic receptor P2Y6 
P2RY6                 0.133   pyrimidinergic receptor P2Y6 
P2RY6                 0.133   pyrimidinergic receptor P2Y6 
SSTR4                 0.133   somatostatin receptor 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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