Search of human proteins with 217330618

Search of human proteins with 217330618

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|217330618 Sec61 alpha form 2 isoform b [Homo sapiens]
         (454 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|217330618 Sec61 alpha form 2 isoform b [Homo sapiens]              892   0.0  
gi|14589847 Sec61 alpha form 2 isoform a [Homo sapiens]               880   0.0  
gi|7019415 Sec61 alpha 1 subunit [Homo sapiens]                       836   0.0  
gi|217330616 Sec61 alpha form 2 isoform c [Homo sapiens]              762   0.0  
gi|4755125 aquaporin 4 isoform b [Homo sapiens]                        33   0.41 
gi|4502181 aquaporin 4 isoform a [Homo sapiens]                        33   0.41 
gi|53933284 olfactory receptor, family 5, subfamily H, member 15...    32   0.91 
gi|20070323 solute carrier family 30 (zinc transporter), member ...    32   1.6  
gi|37700249 HEPACAM family member 2 isoform 2 [Homo sapiens]           32   1.6  
gi|86439957 HEPACAM family member 2 isoform 1 [Homo sapiens]           32   1.6  
gi|181337167 solute carrier family 7 (cationic amino acid transp...    32   1.6  
gi|53933276 olfactory receptor, family 5, subfamily H, member 14...    32   1.6  
gi|53828732 olfactory receptor, family 5, subfamily H, member 6 ...    31   2.0  
gi|224548987 presenilin stabilization factor-like isoform 2 [Hom...    30   5.9  
gi|50726954 presenilin stabilization factor-like isoform 1 [Homo...    30   5.9  
gi|192807300 calcium channel, voltage-dependent, L type, alpha 1...    30   5.9  
gi|192807298 calcium channel, voltage-dependent, L type, alpha 1...    30   5.9  
gi|4502527 calcium channel, voltage-dependent, L type, alpha 1D ...    30   5.9  
gi|13540565 dendritic cell-specific transmembrane protein [Homo ...    30   5.9  

>gi|217330618 Sec61 alpha form 2 isoform b [Homo sapiens]
          Length = 454

 Score =  892 bits (2306), Expect = 0.0
 Identities = 454/454 (100%), Positives = 454/454 (100%)

Query: 1   MGIKFLEVIKPFCAVLPEIQKPERKIPLFGIMSSDSADPFYWMRVILASNRGTLMELGIS 60
           MGIKFLEVIKPFCAVLPEIQKPERKIPLFGIMSSDSADPFYWMRVILASNRGTLMELGIS
Sbjct: 1   MGIKFLEVIKPFCAVLPEIQKPERKIPLFGIMSSDSADPFYWMRVILASNRGTLMELGIS 60

Query: 61  PIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFGMIITIGQAIVYVMTGMYGDPAE 120
           PIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFGMIITIGQAIVYVMTGMYGDPAE
Sbjct: 61  PIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFGMIITIGQAIVYVMTGMYGDPAE 120

Query: 121 MGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPTTIN 180
           MGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPTTIN
Sbjct: 121 MGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPTTIN 180

Query: 181 TGRGTEFEGAVIALFHLLATRTDKVRALREAFYRQNLPNLMNLIATVFVFAVVIYFQGFR 240
           TGRGTEFEGAVIALFHLLATRTDKVRALREAFYRQNLPNLMNLIATVFVFAVVIYFQGFR
Sbjct: 181 TGRGTEFEGAVIALFHLLATRTDKVRALREAFYRQNLPNLMNLIATVFVFAVVIYFQGFR 240

Query: 241 VDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSNLYVISQMLSVRFSGNFLVNLLG 300
           VDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSNLYVISQMLSVRFSGNFLVNLLG
Sbjct: 241 VDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSNLYVISQMLSVRFSGNFLVNLLG 300

Query: 301 QWADVSGGGPARSYPVGGLCYYLSPPESMGAIFEDPVHVVVYIIFMLGSCAFFSKTWIEV 360
           QWADVSGGGPARSYPVGGLCYYLSPPESMGAIFEDPVHVVVYIIFMLGSCAFFSKTWIEV
Sbjct: 301 QWADVSGGGPARSYPVGGLCYYLSPPESMGAIFEDPVHVVVYIIFMLGSCAFFSKTWIEV 360

Query: 361 SGSSAKDVAKQLKEQQMVMRGHRDTSMVHELNRYIPTAAAFGGLCIGALSVLADFLGAIG 420
           SGSSAKDVAKQLKEQQMVMRGHRDTSMVHELNRYIPTAAAFGGLCIGALSVLADFLGAIG
Sbjct: 361 SGSSAKDVAKQLKEQQMVMRGHRDTSMVHELNRYIPTAAAFGGLCIGALSVLADFLGAIG 420

Query: 421 SGTGILLAVTIIYQYFEIFVKEQAEVGGMGALFF 454
           SGTGILLAVTIIYQYFEIFVKEQAEVGGMGALFF
Sbjct: 421 SGTGILLAVTIIYQYFEIFVKEQAEVGGMGALFF 454


>gi|14589847 Sec61 alpha form 2 isoform a [Homo sapiens]
          Length = 476

 Score =  880 bits (2273), Expect = 0.0
 Identities = 454/476 (95%), Positives = 454/476 (95%), Gaps = 22/476 (4%)

Query: 1   MGIKFLEVIKPFCAVLPEIQKPERKI----------------------PLFGIMSSDSAD 38
           MGIKFLEVIKPFCAVLPEIQKPERKI                      PLFGIMSSDSAD
Sbjct: 1   MGIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSAD 60

Query: 39  PFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFG 98
           PFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFG
Sbjct: 61  PFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFG 120

Query: 99  MIITIGQAIVYVMTGMYGDPAEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGIS 158
           MIITIGQAIVYVMTGMYGDPAEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGIS
Sbjct: 121 MIITIGQAIVYVMTGMYGDPAEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGIS 180

Query: 159 LFIATNICETIVWKAFSPTTINTGRGTEFEGAVIALFHLLATRTDKVRALREAFYRQNLP 218
           LFIATNICETIVWKAFSPTTINTGRGTEFEGAVIALFHLLATRTDKVRALREAFYRQNLP
Sbjct: 181 LFIATNICETIVWKAFSPTTINTGRGTEFEGAVIALFHLLATRTDKVRALREAFYRQNLP 240

Query: 219 NLMNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSN 278
           NLMNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSN
Sbjct: 241 NLMNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSN 300

Query: 279 LYVISQMLSVRFSGNFLVNLLGQWADVSGGGPARSYPVGGLCYYLSPPESMGAIFEDPVH 338
           LYVISQMLSVRFSGNFLVNLLGQWADVSGGGPARSYPVGGLCYYLSPPESMGAIFEDPVH
Sbjct: 301 LYVISQMLSVRFSGNFLVNLLGQWADVSGGGPARSYPVGGLCYYLSPPESMGAIFEDPVH 360

Query: 339 VVVYIIFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRDTSMVHELNRYIPTA 398
           VVVYIIFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRDTSMVHELNRYIPTA
Sbjct: 361 VVVYIIFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRDTSMVHELNRYIPTA 420

Query: 399 AAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQAEVGGMGALFF 454
           AAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQAEVGGMGALFF
Sbjct: 421 AAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQAEVGGMGALFF 476


>gi|7019415 Sec61 alpha 1 subunit [Homo sapiens]
          Length = 476

 Score =  836 bits (2160), Expect = 0.0
 Identities = 424/476 (89%), Positives = 440/476 (92%), Gaps = 22/476 (4%)

Query: 1   MGIKFLEVIKPFCAVLPEIQKPERKI----------------------PLFGIMSSDSAD 38
           M IKFLEVIKPFC +LPEIQKPERKI                      PLFGIMSSDSAD
Sbjct: 1   MAIKFLEVIKPFCVILPEIQKPERKIQFKEKVLWTAITLFIFLVCCQIPLFGIMSSDSAD 60

Query: 39  PFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFG 98
           PFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFG
Sbjct: 61  PFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFG 120

Query: 99  MIITIGQAIVYVMTGMYGDPAEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGIS 158
           MIITIGQ+IVYVMTGMYGDP+EMGAGICLLI IQLFVAGLIVLLLDELLQKGYGLGSGIS
Sbjct: 121 MIITIGQSIVYVMTGMYGDPSEMGAGICLLITIQLFVAGLIVLLLDELLQKGYGLGSGIS 180

Query: 159 LFIATNICETIVWKAFSPTTINTGRGTEFEGAVIALFHLLATRTDKVRALREAFYRQNLP 218
           LFIATNICETIVWKAFSPTT+NTGRG EFEGA+IALFHLLATRTDKVRALREAFYRQNLP
Sbjct: 181 LFIATNICETIVWKAFSPTTVNTGRGMEFEGAIIALFHLLATRTDKVRALREAFYRQNLP 240

Query: 219 NLMNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSN 278
           NLMNLIAT+FVFAVVIYFQGFRVDLPIKSARYRGQY++YPIKLFYTSNIPIILQSALVSN
Sbjct: 241 NLMNLIATIFVFAVVIYFQGFRVDLPIKSARYRGQYNTYPIKLFYTSNIPIILQSALVSN 300

Query: 279 LYVISQMLSVRFSGNFLVNLLGQWADVSGGGPARSYPVGGLCYYLSPPESMGAIFEDPVH 338
           LYVISQMLS RFSGN LV+LLG W+D S GGPAR+YPVGGLCYYLSPPES G++ EDPVH
Sbjct: 301 LYVISQMLSARFSGNLLVSLLGTWSDTSSGGPARAYPVGGLCYYLSPPESFGSVLEDPVH 360

Query: 339 VVVYIIFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRDTSMVHELNRYIPTA 398
            VVYI+FMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHR+TSMVHELNRYIPTA
Sbjct: 361 AVVYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRETSMVHELNRYIPTA 420

Query: 399 AAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQAEVGGMGALFF 454
           AAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ+EVG MGAL F
Sbjct: 421 AAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQSEVGSMGALLF 476


>gi|217330616 Sec61 alpha form 2 isoform c [Homo sapiens]
          Length = 437

 Score =  762 bits (1968), Expect = 0.0
 Identities = 393/415 (94%), Positives = 393/415 (94%), Gaps = 22/415 (5%)

Query: 1   MGIKFLEVIKPFCAVLPEIQKPERKI----------------------PLFGIMSSDSAD 38
           MGIKFLEVIKPFCAVLPEIQKPERKI                      PLFGIMSSDSAD
Sbjct: 1   MGIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSAD 60

Query: 39  PFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFG 98
           PFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFG
Sbjct: 61  PFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFG 120

Query: 99  MIITIGQAIVYVMTGMYGDPAEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGIS 158
           MIITIGQAIVYVMTGMYGDPAEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGIS
Sbjct: 121 MIITIGQAIVYVMTGMYGDPAEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGIS 180

Query: 159 LFIATNICETIVWKAFSPTTINTGRGTEFEGAVIALFHLLATRTDKVRALREAFYRQNLP 218
           LFIATNICETIVWKAFSPTTINTGRGTEFEGAVIALFHLLATRTDKVRALREAFYRQNLP
Sbjct: 181 LFIATNICETIVWKAFSPTTINTGRGTEFEGAVIALFHLLATRTDKVRALREAFYRQNLP 240

Query: 219 NLMNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSN 278
           NLMNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSN
Sbjct: 241 NLMNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSN 300

Query: 279 LYVISQMLSVRFSGNFLVNLLGQWADVSGGGPARSYPVGGLCYYLSPPESMGAIFEDPVH 338
           LYVISQMLSVRFSGNFLVNLLGQWADVSGGGPARSYPVGGLCYYLSPPESMGAIFEDPVH
Sbjct: 301 LYVISQMLSVRFSGNFLVNLLGQWADVSGGGPARSYPVGGLCYYLSPPESMGAIFEDPVH 360

Query: 339 VVVYIIFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRDTSMVHELNR 393
           VVVYIIFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRDTSMVHELNR
Sbjct: 361 VVVYIIFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRDTSMVHELNR 415


>gi|4755125 aquaporin 4 isoform b [Homo sapiens]
          Length = 301

 Score = 33.5 bits (75), Expect = 0.41
 Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 4/99 (4%)

Query: 101 ITIGQAIVYVMTGMYGDPAEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLF 160
           I+I +++ Y+     G  A +GAGI  L+     V GL V ++   L  G+GL   + L 
Sbjct: 88  ISIAKSVFYIAAQCLG--AIIGAGILYLVTPPSVVGGLGVTMVHGNLTAGHGL--LVELI 143

Query: 161 IATNICETIVWKAFSPTTINTGRGTEFEGAVIALFHLLA 199
           I   +  TI     S  T  TG      G  +A+ HL A
Sbjct: 144 ITFQLVFTIFASCDSKRTDVTGSIALAIGFSVAIGHLFA 182


>gi|4502181 aquaporin 4 isoform a [Homo sapiens]
          Length = 323

 Score = 33.5 bits (75), Expect = 0.41
 Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 4/99 (4%)

Query: 101 ITIGQAIVYVMTGMYGDPAEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLF 160
           I+I +++ Y+     G  A +GAGI  L+     V GL V ++   L  G+GL   + L 
Sbjct: 110 ISIAKSVFYIAAQCLG--AIIGAGILYLVTPPSVVGGLGVTMVHGNLTAGHGL--LVELI 165

Query: 161 IATNICETIVWKAFSPTTINTGRGTEFEGAVIALFHLLA 199
           I   +  TI     S  T  TG      G  +A+ HL A
Sbjct: 166 ITFQLVFTIFASCDSKRTDVTGSIALAIGFSVAIGHLFA 204


>gi|53933284 olfactory receptor, family 5, subfamily H, member 15
           [Homo sapiens]
          Length = 313

 Score = 32.3 bits (72), Expect = 0.91
 Identities = 62/291 (21%), Positives = 114/291 (39%), Gaps = 62/291 (21%)

Query: 19  IQKPERKIPLF---------------GIMSSDSADPFYWMRVILASNRGTLMELGISPIV 63
           + +P+ KIPLF               G+++    DP   + + L       ++  IS  V
Sbjct: 18  LYQPQWKIPLFLAFLVIYLITIMGNLGLIAVIWKDPHLHIPMYLLLGNLAFVDAWISSTV 77

Query: 64  TSGLIMQLLAGAKIIEVGDTPKD---------RALFNGAQKLFGMIITIGQAIVYVMTGM 114
           T  ++   LA +K+I + +                F  A   +   + I + ++Y     
Sbjct: 78  TPKMLNNFLAKSKMISLSECKIQFFSIAIGVTTECFLLATMAYDRYVAICKPLLY----- 132

Query: 115 YGDPAEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAF 174
              PA M  G+C+ ++I  ++AG++  L+ E     + L    S  +    C+TI     
Sbjct: 133 ---PAIMTNGLCIRLLILSYIAGILHALIHEGFL--FRLTFCNSNIVHHIYCDTIPLSKI 187

Query: 175 SPT--TINTGRGTEFEGAV-------------IALFHLLATRTDKVRALREAFYRQNLPN 219
           S T  +IN      F G++               LF +L  ++DK   +R+AF       
Sbjct: 188 SCTDSSINFLMVFIFSGSIQVFSIVTILISYTFVLFTVLEKKSDK--GVRKAF------- 238

Query: 220 LMNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPII 270
                    +F+V +Y+ G  + + +  A  +    +    LFYT  IP++
Sbjct: 239 ---STCGAHLFSVCLYY-GPLLLMYVGPASPQADGQNMVEPLFYTVIIPLL 285


>gi|20070323 solute carrier family 30 (zinc transporter), member 5
           isoform 1 [Homo sapiens]
          Length = 765

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 34/124 (27%), Positives = 50/124 (40%), Gaps = 17/124 (13%)

Query: 323 LSPPESMGAIFEDPVHVVVYIIFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGH 382
           + PPE +      PV V   I+ ++G CAF S       G+S              M GH
Sbjct: 512 IDPPE-LDTHMLTPVSVGGLIVNLIGICAF-SHAHSHAHGASQGSCHSSDHSHSHHMHGH 569

Query: 383 RDTSMVHELNRYIPTAAAFGGLCIGA----LSVLADFLGAIGSGTGILLAVTIIYQYFEI 438
            D    H         +A GG+        L VLAD LG+IG     ++  T++ + F  
Sbjct: 570 SDHGHGHS------HGSAGGGMNANMRGVFLHVLADTLGSIG-----VIVSTVLIEQFGW 618

Query: 439 FVKE 442
           F+ +
Sbjct: 619 FIAD 622


>gi|37700249 HEPACAM family member 2 isoform 2 [Homo sapiens]
          Length = 450

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 5/39 (12%)

Query: 143 LDELLQKGYGLG-----SGISLFIATNICETIVWKAFSP 176
           L++L QKG  L      +GISLF+  ++C   +WK + P
Sbjct: 327 LEKLAQKGKSLSPLASITGISLFLIISMCLLFLWKKYQP 365


>gi|86439957 HEPACAM family member 2 isoform 1 [Homo sapiens]
          Length = 462

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 5/39 (12%)

Query: 143 LDELLQKGYGLG-----SGISLFIATNICETIVWKAFSP 176
           L++L QKG  L      +GISLF+  ++C   +WK + P
Sbjct: 339 LEKLAQKGKSLSPLASITGISLFLIISMCLLFLWKKYQP 377


>gi|181337167 solute carrier family 7 (cationic amino acid
           transporter, y+ system), member 14 [Homo sapiens]
          Length = 771

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 17/183 (9%)

Query: 57  LGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFGMIITIGQAIVYVMTGMYG 116
           +G    V SGL+ + +AG  +I                 +   + +I   + Y   G+  
Sbjct: 67  VGTGMYVVSGLVAKEMAGPGVI--------------VSFIIAAVASILSGVCYAEFGVRV 112

Query: 117 DPAEMGAGICLLIIIQLFVAGLIV--LLLDELLQKGYGLGSGISLFIATNICETIVWKAF 174
                 A     + +  FVA  I   L+L+ L+    G  +  S+F +        W A 
Sbjct: 113 PKTTGSAYTYSYVTVGEFVAFFIGWNLILEYLIGTAAGASALSSMFDSLANHTISRWMAD 172

Query: 175 SPTTIN-TGRGTEFEGAVIALFHLLATRTDKVRALREAFYRQNLPNLMNLIATVFVFAVV 233
           S  T+N  G+G E    ++AL   +         ++ +    N+ N++NL   VF+    
Sbjct: 173 SVGTLNGLGKGEESYPDLLALLIAVIVTIIVALGVKNSIGFNNVLNVLNLAVWVFIMIAG 232

Query: 234 IYF 236
           ++F
Sbjct: 233 LFF 235


>gi|53933276 olfactory receptor, family 5, subfamily H, member 14
           [Homo sapiens]
          Length = 310

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 33/152 (21%), Positives = 62/152 (40%), Gaps = 34/152 (22%)

Query: 19  IQKPERKIPLF---------------GIMSSDSADPFYWMRVILASNRGTLMELGISPIV 63
           + +P+ KIPLF               G+++    DP   + + L       ++  +S  V
Sbjct: 18  LYQPQWKIPLFLAFLVIYLITIMGNLGLIAVIWKDPHLHIPMYLLLGNLAFVDALLSSSV 77

Query: 64  TSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFGMIITIGQAIVYVMTGMYGD------ 117
           T  +++  LA +K+I + +            +LF   I++      + T  Y        
Sbjct: 78  TLKMLINFLAKSKMISLSECKI---------QLFSFAISVTTECFLLATMAYDRYVAICK 128

Query: 118 ----PAEMGAGICLLIIIQLFVAGLIVLLLDE 145
               PA M  G+C+ ++I  +V GL+  L+ E
Sbjct: 129 PLLYPAIMTNGLCIRLLILSYVGGLLHALIHE 160


>gi|53828732 olfactory receptor, family 5, subfamily H, member 6
           [Homo sapiens]
          Length = 325

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 31/151 (20%), Positives = 61/151 (40%), Gaps = 32/151 (21%)

Query: 19  IQKPERKIPLF---------------GIMSSDSADPFYWMRVILASNRGTLMELGISPIV 63
           + +P+ KIPLF               G++     DP   + + L       ++  +S  V
Sbjct: 34  LHQPDCKIPLFLAFLVIYLITIMGNLGLIVLIWKDPHLHIPMYLFLGSLAFVDASLSSTV 93

Query: 64  TSGLIMQLLAGAKIIEVGD---------TPKDRALFNGAQKLFGMIITIGQAIVYVMTGM 114
           T  +++  LA +K+I + +         T      F  A   +   + I +A++Y     
Sbjct: 94  TPKMLINFLAKSKMISLSECMVQFFSLVTTVTTECFLLATMAYDRYVAICKALLY----- 148

Query: 115 YGDPAEMGAGICLLIIIQLFVAGLIVLLLDE 145
              P  M   +C+ +++  F+ GL+  L+ E
Sbjct: 149 ---PVIMTNELCIQLLVLSFIGGLLHALIHE 176


>gi|224548987 presenilin stabilization factor-like isoform 2 [Homo
           sapiens]
          Length = 216

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 269 IILQSALVSNLYVISQMLSVRFSGNFLVN-LLGQWADVSGGGPARSYPVGGLC 320
           ++L   LVS    IS    +  +  F++  L+G WA ++ GG  RS  +  LC
Sbjct: 151 VLLTHLLVSAQTFISSYYGINLASAFIILVLMGTWAFLAAGGSCRSLKLCLLC 203


>gi|50726954 presenilin stabilization factor-like isoform 1 [Homo
           sapiens]
          Length = 257

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 269 IILQSALVSNLYVISQMLSVRFSGNFLVN-LLGQWADVSGGGPARSYPVGGLC 320
           ++L   LVS    IS    +  +  F++  L+G WA ++ GG  RS  +  LC
Sbjct: 192 VLLTHLLVSAQTFISSYYGINLASAFIILVLMGTWAFLAAGGSCRSLKLCLLC 244


>gi|192807300 calcium channel, voltage-dependent, L type, alpha 1D
           subunit isoform b [Homo sapiens]
          Length = 2161

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 8/94 (8%)

Query: 54  LMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFGMIITI-----GQAIV 108
           L+ L +  I+ S L MQL  G       +T   R+ F+   +    +  I       A++
Sbjct: 654 LLLLFLFIIIFSLLGMQLFGGK--FNFDETQTKRSTFDNFPQALLTVFQILTGEDWNAVM 711

Query: 109 YVMTGMYGDPAEMGAGICLLIIIQLFVAGLIVLL 142
           Y     YG P+  G  +C+  II LF+ G  +LL
Sbjct: 712 YDGIMAYGGPSSSGMIVCIYFII-LFICGNYILL 744


>gi|192807298 calcium channel, voltage-dependent, L type, alpha 1D
           subunit isoform c [Homo sapiens]
          Length = 2137

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 8/94 (8%)

Query: 54  LMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFGMIITI-----GQAIV 108
           L+ L +  I+ S L MQL  G       +T   R+ F+   +    +  I       A++
Sbjct: 654 LLLLFLFIIIFSLLGMQLFGGK--FNFDETQTKRSTFDNFPQALLTVFQILTGEDWNAVM 711

Query: 109 YVMTGMYGDPAEMGAGICLLIIIQLFVAGLIVLL 142
           Y     YG P+  G  +C+  II LF+ G  +LL
Sbjct: 712 YDGIMAYGGPSSSGMIVCIYFII-LFICGNYILL 744


>gi|4502527 calcium channel, voltage-dependent, L type, alpha 1D
           subunit isoform a [Homo sapiens]
          Length = 2181

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 8/94 (8%)

Query: 54  LMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFGMIITI-----GQAIV 108
           L+ L +  I+ S L MQL  G       +T   R+ F+   +    +  I       A++
Sbjct: 674 LLLLFLFIIIFSLLGMQLFGGK--FNFDETQTKRSTFDNFPQALLTVFQILTGEDWNAVM 731

Query: 109 YVMTGMYGDPAEMGAGICLLIIIQLFVAGLIVLL 142
           Y     YG P+  G  +C+  II LF+ G  +LL
Sbjct: 732 YDGIMAYGGPSSSGMIVCIYFII-LFICGNYILL 764


>gi|13540565 dendritic cell-specific transmembrane protein [Homo
           sapiens]
          Length = 470

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 18/67 (26%), Positives = 39/67 (58%), Gaps = 5/67 (7%)

Query: 145 ELLQKGYGLGSGISLF---IATNICETIVWKAFSPTTINTGRGTEFEGAVIALFHLLATR 201
           E +Q  YGL + +S+F   ++ N  +T+    FSP+ +   +  + +G V+++ + +AT 
Sbjct: 146 EAIQWIYGLATPLSVFDDLVSWN--QTLAVSLFSPSHVLEAQLNDSKGEVLSVLYQMATT 203

Query: 202 TDKVRAL 208
           T+ + +L
Sbjct: 204 TEVLSSL 210


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.326    0.143    0.423 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,428,617
Number of Sequences: 37866
Number of extensions: 639253
Number of successful extensions: 1547
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 1540
Number of HSP's gapped (non-prelim): 20
length of query: 454
length of database: 18,247,518
effective HSP length: 106
effective length of query: 348
effective length of database: 14,233,722
effective search space: 4953335256
effective search space used: 4953335256
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.