APH1B 31718

Name: APH1B	Sequence: fasta or formatted (257aa)		NCBI GI: 50726954
Description: presenilin stabilization factor-like isoform 1		Referenced in: Notch Pathway
Other entries for this name: alt prot [216aa] presenilin stabilization factor-like isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.6 22 2 C cysteine 1.9 5 1 D aspartate 2.3 6 1 E glutamate 1.9 5 1 F phenylalanine 10.1 26 2 G glycine 8.6 22 2 H histidine 1.2 3 1 I isoleucine 8.6 22 2 K lysine 4.3 11 3 L leucine 14.8 38 2 M methionine 2.7 7 1 N asparagine 2.3 6 1 P proline 2.7 7 1 Q glutamine 2.3 6 1 R arginine 2.7 7 1 S serine 8.2 21 2 T threonine 4.3 11 1 V valine 6.6 17 1 W tryptophan 1.9 5 1 Y tyrosine 3.9 10 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 presenilin stabilization factor-like isoform 1 [Homo... APH1B 0.791 presenilin stabilization factor-like isoform 2 [Hom... APH1A 0.565 anterior pharynx defective 1 homolog A isoform 2 [H... APH1A 0.563 anterior pharynx defective 1 homolog A isoform 1 [H... SEC61A2 0.010 Sec61 alpha form 2 isoform b SEC61A2 0.010 Sec61 alpha form 2 isoform c SEC61A2 0.010 Sec61 alpha form 2 isoform a OR9A4 0.010 olfactory receptor, family 9, subfamily A, member 4 ... SLC7A14 0.008 solute carrier family 7 (cationic amino acid transp... STRA6 0.006 stimulated by retinoic acid gene 6 homolog isoform ... STRA6 0.006 stimulated by retinoic acid gene 6 homolog isoform ... STRA6 0.006 stimulated by retinoic acid gene 6 homolog isoform ... STRA6 0.006 stimulated by retinoic acid gene 6 homolog isoform ... GPR133 0.006 G protein-coupled receptor 133 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.