Search of human proteins with 217272859

Search of human proteins with 217272859

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|217272859 ATP/GTP-binding protein isoform 2 [Homo sapiens]
         (361 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|217272859 ATP/GTP-binding protein isoform 2 [Homo sapiens]         723   0.0  
gi|5803029 ATP/GTP-binding protein isoform 1 [Homo sapiens]           454   e-128
gi|40217805 nucleolar protein 9 [Homo sapiens]                         35   0.10 
gi|164698504 septin 9 isoform f [Homo sapiens]                         33   0.52 
gi|164698502 septin 9 isoform d [Homo sapiens]                         33   0.52 
gi|164698500 septin 9 isoform e [Homo sapiens]                         33   0.52 
gi|164698498 septin 9 isoform b [Homo sapiens]                         33   0.52 
gi|164698496 septin 9 isoform e [Homo sapiens]                         33   0.52 
gi|164698494 septin 9 isoform a [Homo sapiens]                         33   0.52 
gi|116256489 septin 9 isoform c [Homo sapiens]                         33   0.52 
gi|156602655 septin 3 isoform A [Homo sapiens]                         32   0.68 
gi|156602653 septin 3 isoform B [Homo sapiens]                         32   0.68 
gi|34878716 paired box protein 2 isoform d [Homo sapiens]              29   5.7  
gi|34878701 paired box protein 2 isoform b [Homo sapiens]              29   5.7  
gi|34878699 paired box protein 2 isoform a [Homo sapiens]              29   5.7  
gi|34878709 paired box protein 2 isoform c [Homo sapiens]              29   5.7  
gi|34878703 paired box protein 2 isoform e [Homo sapiens]              29   5.7  
gi|168823435 hypothetical protein LOC79747 [Homo sapiens]              29   5.7  
gi|223555935 dynein, axonemal, heavy polypeptide 14 isoform 1 [H...    28   9.8  
gi|27477039 inducible T-cell co-stimulator ligand [Homo sapiens]       28   9.8  

>gi|217272859 ATP/GTP-binding protein isoform 2 [Homo sapiens]
          Length = 361

 Score =  723 bits (1867), Expect = 0.0
 Identities = 361/361 (100%), Positives = 361/361 (100%)

Query: 1   MGEEANDDKKPTTKFELERETELRFEVEASQSVQLELLTGMAEIFGTELTRNKKFTFDAG 60
           MGEEANDDKKPTTKFELERETELRFEVEASQSVQLELLTGMAEIFGTELTRNKKFTFDAG
Sbjct: 1   MGEEANDDKKPTTKFELERETELRFEVEASQSVQLELLTGMAEIFGTELTRNKKFTFDAG 60

Query: 61  AKVAVFTWHGCSVQLSGRTEVAYVSKDTPMLLYLNTHTALEQMRRQAEKEEERGPRVMVV 120
           AKVAVFTWHGCSVQLSGRTEVAYVSKDTPMLLYLNTHTALEQMRRQAEKEEERGPRVMVV
Sbjct: 61  AKVAVFTWHGCSVQLSGRTEVAYVSKDTPMLLYLNTHTALEQMRRQAEKEEERGPRVMVV 120

Query: 121 GPTDVGKSTVCRLLLNYAITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGSGYQALVH 180
           GPTDVGKSTVCRLLLNYAITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGSGYQALVH
Sbjct: 121 GPTDVGKSTVCRLLLNYAITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGSGYQALVH 180

Query: 181 AASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRRECRDERIREY 240
           AASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRRECRDERIREY
Sbjct: 181 AASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRRECRDERIREY 240

Query: 241 FYGFRGCFYPHAFNVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRDMVHH 300
           FYGFRGCFYPHAFNVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRDMVHH
Sbjct: 241 FYGFRGCFYPHAFNVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRDMVHH 300

Query: 301 LLSVSTAEGTEENLSETSVAGFIVVTSVDLEHQVFTVLSPAPRPLPKNFLLIMDIRFMDL 360
           LLSVSTAEGTEENLSETSVAGFIVVTSVDLEHQVFTVLSPAPRPLPKNFLLIMDIRFMDL
Sbjct: 301 LLSVSTAEGTEENLSETSVAGFIVVTSVDLEHQVFTVLSPAPRPLPKNFLLIMDIRFMDL 360

Query: 361 K 361
           K
Sbjct: 361 K 361


>gi|5803029 ATP/GTP-binding protein isoform 1 [Homo sapiens]
          Length = 425

 Score =  454 bits (1167), Expect = e-128
 Identities = 233/262 (88%), Positives = 238/262 (90%), Gaps = 7/262 (2%)

Query: 103 MRRQAEKEEE---RGPRVMVVGPTDVGKSTVCRLLLNYAITSRLADVFNQRCEVNRRASV 159
           + R A+ EE    + P V   G T  G +    + L   ITSRLADVFNQRCEVNRRASV
Sbjct: 168 IERPADVEEGFSIQAPLVYHFGSTTPGTN----IKLYNKITSRLADVFNQRCEVNRRASV 223

Query: 160 SGCVINTCGWVKGSGYQALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSG 219
           SGCVINTCGWVKGSGYQALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSG
Sbjct: 224 SGCVINTCGWVKGSGYQALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSG 283

Query: 220 GVVERSKDFRRECRDERIREYFYGFRGCFYPHAFNVKFSDVKIYKVGAPTIPDSCLPLGM 279
           GVVERSKDFRRECRDERIREYFYGFRGCFYPHAFNVKFSDVKIYKVGAPTIPDSCLPLGM
Sbjct: 284 GVVERSKDFRRECRDERIREYFYGFRGCFYPHAFNVKFSDVKIYKVGAPTIPDSCLPLGM 343

Query: 280 SQEDNQLKLVPVTPGRDMVHHLLSVSTAEGTEENLSETSVAGFIVVTSVDLEHQVFTVLS 339
           SQEDNQLKLVPVTPGRDMVHHLLSVSTAEGTEENLSETSVAGFIVVTSVDLEHQVFTVLS
Sbjct: 344 SQEDNQLKLVPVTPGRDMVHHLLSVSTAEGTEENLSETSVAGFIVVTSVDLEHQVFTVLS 403

Query: 340 PAPRPLPKNFLLIMDIRFMDLK 361
           PAPRPLPKNFLLIMDIRFMDLK
Sbjct: 404 PAPRPLPKNFLLIMDIRFMDLK 425



 Score =  277 bits (708), Expect = 1e-74
 Identities = 138/139 (99%), Positives = 139/139 (100%)

Query: 1   MGEEANDDKKPTTKFELERETELRFEVEASQSVQLELLTGMAEIFGTELTRNKKFTFDAG 60
           MGEEANDDKKPTTKFELERETELRFEVEASQSVQLELLTGMAEIFGTELTRNKKFTFDAG
Sbjct: 1   MGEEANDDKKPTTKFELERETELRFEVEASQSVQLELLTGMAEIFGTELTRNKKFTFDAG 60

Query: 61  AKVAVFTWHGCSVQLSGRTEVAYVSKDTPMLLYLNTHTALEQMRRQAEKEEERGPRVMVV 120
           AKVAVFTWHGCSVQLSGRTEVAYVSKDTPMLLYLNTHTALEQMRRQAEKEEERGPRVMVV
Sbjct: 61  AKVAVFTWHGCSVQLSGRTEVAYVSKDTPMLLYLNTHTALEQMRRQAEKEEERGPRVMVV 120

Query: 121 GPTDVGKSTVCRLLLNYAI 139
           GPTDVGKSTVCRLLLNYA+
Sbjct: 121 GPTDVGKSTVCRLLLNYAV 139


>gi|40217805 nucleolar protein 9 [Homo sapiens]
          Length = 702

 Score = 35.0 bits (79), Expect = 0.10
 Identities = 18/47 (38%), Positives = 30/47 (63%)

Query: 95  NTHTALEQMRRQAEKEEERGPRVMVVGPTDVGKSTVCRLLLNYAITS 141
           +T +ALE++   + +E +  P ++V G  DVGKST  R L+N+ + S
Sbjct: 280 STLSALEELVNVSCEEVDGCPVILVCGSQDVGKSTFNRYLINHLLNS 326


>gi|164698504 septin 9 isoform f [Homo sapiens]
          Length = 335

 Score = 32.7 bits (73), Expect = 0.52
 Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%)

Query: 93  YLNTHTALEQMRRQAEKEEERGPRVMVVGPTDVGKSTVCRLLLNYAITSR 142
           Y+   + LEQMRR+A K+      +MVVG + +GKST+   L    I+ +
Sbjct: 27  YVGIDSILEQMRRKAMKQGFEF-NIMVVGQSGLGKSTLINTLFKSKISRK 75


>gi|164698502 septin 9 isoform d [Homo sapiens]
          Length = 474

 Score = 32.7 bits (73), Expect = 0.52
 Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%)

Query: 93  YLNTHTALEQMRRQAEKEEERGPRVMVVGPTDVGKSTVCRLLLNYAITSR 142
           Y+   + LEQMRR+A K+      +MVVG + +GKST+   L    I+ +
Sbjct: 166 YVGIDSILEQMRRKAMKQGFEF-NIMVVGQSGLGKSTLINTLFKSKISRK 214


>gi|164698500 septin 9 isoform e [Homo sapiens]
          Length = 422

 Score = 32.7 bits (73), Expect = 0.52
 Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%)

Query: 93  YLNTHTALEQMRRQAEKEEERGPRVMVVGPTDVGKSTVCRLLLNYAITSR 142
           Y+   + LEQMRR+A K+      +MVVG + +GKST+   L    I+ +
Sbjct: 114 YVGIDSILEQMRRKAMKQGFEF-NIMVVGQSGLGKSTLINTLFKSKISRK 162


>gi|164698498 septin 9 isoform b [Homo sapiens]
          Length = 579

 Score = 32.7 bits (73), Expect = 0.52
 Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%)

Query: 93  YLNTHTALEQMRRQAEKEEERGPRVMVVGPTDVGKSTVCRLLLNYAITSR 142
           Y+   + LEQMRR+A K+      +MVVG + +GKST+   L    I+ +
Sbjct: 271 YVGIDSILEQMRRKAMKQGFEF-NIMVVGQSGLGKSTLINTLFKSKISRK 319


>gi|164698496 septin 9 isoform e [Homo sapiens]
          Length = 422

 Score = 32.7 bits (73), Expect = 0.52
 Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%)

Query: 93  YLNTHTALEQMRRQAEKEEERGPRVMVVGPTDVGKSTVCRLLLNYAITSR 142
           Y+   + LEQMRR+A K+      +MVVG + +GKST+   L    I+ +
Sbjct: 114 YVGIDSILEQMRRKAMKQGFEF-NIMVVGQSGLGKSTLINTLFKSKISRK 162


>gi|164698494 septin 9 isoform a [Homo sapiens]
          Length = 586

 Score = 32.7 bits (73), Expect = 0.52
 Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%)

Query: 93  YLNTHTALEQMRRQAEKEEERGPRVMVVGPTDVGKSTVCRLLLNYAITSR 142
           Y+   + LEQMRR+A K+      +MVVG + +GKST+   L    I+ +
Sbjct: 278 YVGIDSILEQMRRKAMKQGFEF-NIMVVGQSGLGKSTLINTLFKSKISRK 326


>gi|116256489 septin 9 isoform c [Homo sapiens]
          Length = 568

 Score = 32.7 bits (73), Expect = 0.52
 Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%)

Query: 93  YLNTHTALEQMRRQAEKEEERGPRVMVVGPTDVGKSTVCRLLLNYAITSR 142
           Y+   + LEQMRR+A K+      +MVVG + +GKST+   L    I+ +
Sbjct: 260 YVGIDSILEQMRRKAMKQGFEF-NIMVVGQSGLGKSTLINTLFKSKISRK 308


>gi|156602655 septin 3 isoform A [Homo sapiens]
          Length = 358

 Score = 32.3 bits (72), Expect = 0.68
 Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 2/76 (2%)

Query: 84  VSKDTPMLLYLNTHTALEQMRRQAEKEEERGPRVMVVGPTDVGKSTVCRLLLNYAITSRL 143
           +S ++ +L Y+   T +EQMR++  K       +MVVG + +GKST+   L    + SR 
Sbjct: 32  MSINSNLLGYIGIDTIIEQMRKKTMKTGFDF-NIMVVGQSGLGKSTLVNTLFKSQV-SRK 89

Query: 144 ADVFNQRCEVNRRASV 159
           A  +N+  ++ +   +
Sbjct: 90  ASSWNREEKIPKTVEI 105


>gi|156602653 septin 3 isoform B [Homo sapiens]
          Length = 350

 Score = 32.3 bits (72), Expect = 0.68
 Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 2/76 (2%)

Query: 84  VSKDTPMLLYLNTHTALEQMRRQAEKEEERGPRVMVVGPTDVGKSTVCRLLLNYAITSRL 143
           +S ++ +L Y+   T +EQMR++  K       +MVVG + +GKST+   L    + SR 
Sbjct: 32  MSINSNLLGYIGIDTIIEQMRKKTMKTGFDF-NIMVVGQSGLGKSTLVNTLFKSQV-SRK 89

Query: 144 ADVFNQRCEVNRRASV 159
           A  +N+  ++ +   +
Sbjct: 90  ASSWNREEKIPKTVEI 105


>gi|34878716 paired box protein 2 isoform d [Homo sapiens]
          Length = 408

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)

Query: 280 SQEDNQLKLVPVTPGRDMVHHLLSVSTAEGTEENLSETSVAGFIVVTSVDL 330
           S++ N+  L  +TPG D V   LS ST      N+S T    + VVT  D+
Sbjct: 262 SEQGNEYSLPALTPGLDEVKSSLSASTNPELGSNVSGTQT--YPVVTGRDM 310


>gi|34878701 paired box protein 2 isoform b [Homo sapiens]
          Length = 393

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)

Query: 280 SQEDNQLKLVPVTPGRDMVHHLLSVSTAEGTEENLSETSVAGFIVVTSVDL 330
           S++ N+  L  +TPG D V   LS ST      N+S T    + VVT  D+
Sbjct: 262 SEQGNEYSLPALTPGLDEVKSSLSASTNPELGSNVSGTQT--YPVVTGRDM 310


>gi|34878699 paired box protein 2 isoform a [Homo sapiens]
          Length = 416

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)

Query: 280 SQEDNQLKLVPVTPGRDMVHHLLSVSTAEGTEENLSETSVAGFIVVTSVDL 330
           S++ N+  L  +TPG D V   LS ST      N+S T    + VVT  D+
Sbjct: 285 SEQGNEYSLPALTPGLDEVKSSLSASTNPELGSNVSGTQT--YPVVTGRDM 333


>gi|34878709 paired box protein 2 isoform c [Homo sapiens]
          Length = 396

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)

Query: 280 SQEDNQLKLVPVTPGRDMVHHLLSVSTAEGTEENLSETSVAGFIVVTSVDL 330
           S++ N+  L  +TPG D V   LS ST      N+S T    + VVT  D+
Sbjct: 262 SEQGNEYSLPALTPGLDEVKSSLSASTNPELGSNVSGTQT--YPVVTGRDM 310


>gi|34878703 paired box protein 2 isoform e [Homo sapiens]
          Length = 431

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)

Query: 280 SQEDNQLKLVPVTPGRDMVHHLLSVSTAEGTEENLSETSVAGFIVVTSVDL 330
           S++ N+  L  +TPG D V   LS ST      N+S T    + VVT  D+
Sbjct: 285 SEQGNEYSLPALTPGLDEVKSSLSASTNPELGSNVSGTQT--YPVVTGRDM 333


>gi|168823435 hypothetical protein LOC79747 [Homo sapiens]
          Length = 1667

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 35/143 (24%), Positives = 60/143 (41%), Gaps = 11/143 (7%)

Query: 2   GEEANDDKKPTTKFELERETELRFEVEASQSVQLELLTGMAEIFGTELTRN---KKFTFD 58
           G+E  D K+     E + E+ L       +S ++      A   G + +++   +KF F 
Sbjct: 327 GKEIKDGKEVKDVKEFKPESSLTTLKAPEKSDKVPKEKADARDIGKKRSKDGEKEKFKFS 386

Query: 59  -------AGAKVAVFTWHGCSVQLSGRTEVAYVSKDTPMLLYLNTHTALEQMRRQAEKEE 111
                  +  + +V +   CS  +     V Y +  TP+ L+ N   +LE+M   AEK  
Sbjct: 387 LHGSRPSSEVQYSVQSLSDCSSAIQTSHMVVYATF-TPLYLFENKIFSLEKMADSAEKLR 445

Query: 112 ERGPRVMVVGPTDVGKSTVCRLL 134
           E G   +   P  V +S  C L+
Sbjct: 446 EYGLSHICSHPVLVTRSRSCPLV 468


>gi|223555935 dynein, axonemal, heavy polypeptide 14 isoform 1 [Homo
            sapiens]
          Length = 4515

 Score = 28.5 bits (62), Expect = 9.8
 Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 6/55 (10%)

Query: 117  VMVVGPTDVGKSTVCRLLLNYAITSRLADVFN--QRCEVN----RRASVSGCVIN 165
            VM+VGPT  GK+TV R+L        +AD  +  +R   +    R+  V  CV+N
Sbjct: 1828 VMLVGPTGGGKTTVRRILEKALTLLPIADFLSVAERKSASKISERKGKVDICVLN 1882


>gi|27477039 inducible T-cell co-stimulator ligand [Homo sapiens]
          Length = 302

 Score = 28.5 bits (62), Expect = 9.8
 Identities = 16/40 (40%), Positives = 22/40 (55%)

Query: 276 PLGMSQEDNQLKLVPVTPGRDMVHHLLSVSTAEGTEENLS 315
           P GM + D  L+L  VTP  +   H L +S + G +E LS
Sbjct: 88  PAGMLRGDFSLRLFNVTPQDEQKFHCLVLSQSLGFQEVLS 127


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.136    0.397 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,131,311
Number of Sequences: 37866
Number of extensions: 545550
Number of successful extensions: 1584
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 1568
Number of HSP's gapped (non-prelim): 23
length of query: 361
length of database: 18,247,518
effective HSP length: 104
effective length of query: 257
effective length of database: 14,309,454
effective search space: 3677529678
effective search space used: 3677529678
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.