Guide to the Human Genome
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Name: OSR1 Sequence: fasta or formatted (266aa) NCBI GI: 21687100
Description:

odd-skipped related 1

Referenced in:

Additional Genes in Development
Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         18           2
 C cysteine            3.0          8           1
 D aspartate           3.4          9           1
 E glutamate           3.8         10           1
 F phenylalanine       5.3         14           1
 G glycine             6.8         18           2
 H histidine           6.0         16           1
 I isoleucine          2.6          7           1
 K lysine              9.0         24           2
 L leucine            10.5         28           2
 M methionine          0.8          2           1
 N asparagine          1.9          5           1
 P proline             9.4         25           1
 Q glutamine           3.8         10           1
 R arginine            5.3         14           2
 S serine              7.1         19           2
 T threonine           6.8         18           1
 V valine              4.9         13           1
 W tryptophan          0.8          2           1
 Y tyrosine            2.3          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   odd-skipped related 1 
OSR2                  0.625   odd-skipped related 2 isoform b 
OSR2                  0.623   odd-skipped related 2 isoform a 
ZNF493                0.147   zinc finger protein 493 isoform 1 
ZNF493                0.147   zinc finger protein 493 isoform 3 
ZNF24                 0.146   zinc finger protein 24 
ZNF430                0.144   zinc finger protein 430 
ZNF616                0.144   zinc finger protein 616 
ZNF226                0.144   zinc finger protein 226 isoform a 
ZNF226                0.144   zinc finger protein 226 isoform a 
ZNF429                0.144   zinc finger protein 429 
ZNF510                0.144   zinc finger protein 510 
ZNF595                0.144   zinc finger protein 595 
ZNF431                0.142   zinc finger protein 431 
ZNF239                0.140   zinc finger protein 239 
ZNF239                0.140   zinc finger protein 239 
ZNF239                0.140   zinc finger protein 239 
ZNF239                0.140   zinc finger protein 239 
LOC388559             0.140   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.140   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.140   PREDICTED: hypothetical protein LOC388559 
ZNF492                0.140   zinc finger protein 492 
ZNF100                0.140   zinc finger protein 100 
ZNF98                 0.140   zinc finger protein 98 
ZNF587                0.140   zinc finger protein 587 
ZNF391                0.140   zinc finger protein 391 
ZNF479                0.140   zinc finger protein 479 
ZNF417                0.140   zinc finger protein 417 
ZNF287                0.138   zinc finger protein 287 
ZKSCAN5               0.138   zinc finger with KRAB and SCAN domains 5 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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