Search of human proteins with 21536461

Search of human proteins with 21536461

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|21536461 O-fucosylpeptide
3-beta-N-acetylglucosaminyltransferase [Homo sapiens]
         (321 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|21536461 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransfer...   668   0.0  
gi|93140999 lunatic fringe isoform a [Homo sapiens]                   370   e-103
gi|93141005 lunatic fringe isoform b [Homo sapiens]                   334   5e-92
gi|74271816 radical fringe [Homo sapiens]                             333   9e-92
gi|154689817 beta 1,3-galactosyltransferase-like [Homo sapiens]        43   4e-04
gi|48717495 chondroitin polymerizing factor 2 [Homo sapiens]           37   0.031
gi|31542309 chondroitin sulfate synthase 1 [Homo sapiens]              34   0.20 
gi|74271903 chondroitin sulfate synthase 3 [Homo sapiens]              33   0.34 
gi|223890230 zinc finger protein, multitype 2 [Homo sapiens]           30   3.7  
gi|13540527 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran...    29   4.9  
gi|9910144 core 1 synthase, glycoprotein-N-acetylgalactosamine 3...    29   6.4  
gi|110347423 spondin 1, extracellular matrix protein [Homo sapiens]    28   8.4  
gi|18087811 TRAP/Mediator complex component TRAP25 [Homo sapiens]      28   8.4  

>gi|21536461 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
           [Homo sapiens]
          Length = 321

 Score =  668 bits (1724), Expect = 0.0
 Identities = 321/321 (100%), Positives = 321/321 (100%)

Query: 1   MQCRLPRGLAGALLTLLCMGLLCLRYHLNLSPQRVQGTPELSQPNPGPPKLQLHDVFIAV 60
           MQCRLPRGLAGALLTLLCMGLLCLRYHLNLSPQRVQGTPELSQPNPGPPKLQLHDVFIAV
Sbjct: 1   MQCRLPRGLAGALLTLLCMGLLCLRYHLNLSPQRVQGTPELSQPNPGPPKLQLHDVFIAV 60

Query: 61  KTTRAFHRLRLELLLDTWVSRTREQTFVFTDSPDKGLQERLGSHLVVTNCSAEHSHPALS 120
           KTTRAFHRLRLELLLDTWVSRTREQTFVFTDSPDKGLQERLGSHLVVTNCSAEHSHPALS
Sbjct: 61  KTTRAFHRLRLELLLDTWVSRTREQTFVFTDSPDKGLQERLGSHLVVTNCSAEHSHPALS 120

Query: 121 CKMAAEFDTFLASGLRWFCHVDDDNYVNPRALLQLLRAFPLARDVYVGRPSLNRPIHASE 180
           CKMAAEFDTFLASGLRWFCHVDDDNYVNPRALLQLLRAFPLARDVYVGRPSLNRPIHASE
Sbjct: 121 CKMAAEFDTFLASGLRWFCHVDDDNYVNPRALLQLLRAFPLARDVYVGRPSLNRPIHASE 180

Query: 181 PQPHNRTRLVQFWFATGGAGFCINRKLALKMAPWASGSRFMDTSALIRLPDDCTMGYIIE 240
           PQPHNRTRLVQFWFATGGAGFCINRKLALKMAPWASGSRFMDTSALIRLPDDCTMGYIIE
Sbjct: 181 PQPHNRTRLVQFWFATGGAGFCINRKLALKMAPWASGSRFMDTSALIRLPDDCTMGYIIE 240

Query: 241 CKLGGRLQPSPLFHSHLETLQLLRTAQLPEQVTLSYGVFEGKLNVIKLQGPFSPEEDPSR 300
           CKLGGRLQPSPLFHSHLETLQLLRTAQLPEQVTLSYGVFEGKLNVIKLQGPFSPEEDPSR
Sbjct: 241 CKLGGRLQPSPLFHSHLETLQLLRTAQLPEQVTLSYGVFEGKLNVIKLQGPFSPEEDPSR 300

Query: 301 FRSLHCLLYPDTPWCPQLGAR 321
           FRSLHCLLYPDTPWCPQLGAR
Sbjct: 301 FRSLHCLLYPDTPWCPQLGAR 321


>gi|93140999 lunatic fringe isoform a [Homo sapiens]
          Length = 379

 Score =  370 bits (951), Expect = e-103
 Identities = 178/279 (63%), Positives = 212/279 (75%), Gaps = 1/279 (0%)

Query: 39  PELSQPNPGPPKLQLHDVFIAVKTTRAFHRLRLELLLDTWVSRTREQTFVFTDSPDKGLQ 98
           P    P P    L   DVFIAVKTT+ FHR RL+LLL+TW+SR +E TF+FTD  D+ L 
Sbjct: 98  PADGHPRPLAEPLAPRDVFIAVKTTKKFHRARLDLLLETWISRHKEMTFIFTDGEDEALA 157

Query: 99  ERLGSHLVVTNCSAEHSHPALSCKMAAEFDTFLASGLRWFCHVDDDNYVNPRALLQLLRA 158
              G+ +V+TNCSA HS  ALSCKMA E+D F+ SG +WFCHVDDDNYVN RALL+LL +
Sbjct: 158 RHTGN-VVITNCSAAHSRQALSCKMAVEYDRFIESGRKWFCHVDDDNYVNLRALLRLLAS 216

Query: 159 FPLARDVYVGRPSLNRPIHASEPQPHNRTRLVQFWFATGGAGFCINRKLALKMAPWASGS 218
           +P  RDVYVG+PSL+RPI A E    N+ R V FWFATGGAGFCI+R LALKM+PWASG 
Sbjct: 217 YPHTRDVYVGKPSLDRPIQAMERVSENKVRPVHFWFATGGAGFCISRGLALKMSPWASGG 276

Query: 219 RFMDTSALIRLPDDCTMGYIIECKLGGRLQPSPLFHSHLETLQLLRTAQLPEQVTLSYGV 278
            FM+T+  IRLPDDCT+GYI+E  LG  L  S LFHSHLE LQ + T++L EQVTLSYG+
Sbjct: 277 HFMNTAERIRLPDDCTIGYIVEALLGVPLIRSGLFHSHLENLQQVPTSELHEQVTLSYGM 336

Query: 279 FEGKLNVIKLQGPFSPEEDPSRFRSLHCLLYPDTPWCPQ 317
           FE K N + ++GPFS E DPSRFRS+HC LYPDTPWCP+
Sbjct: 337 FENKRNAVHVKGPFSVEADPSRFRSIHCHLYPDTPWCPR 375


>gi|93141005 lunatic fringe isoform b [Homo sapiens]
          Length = 361

 Score =  334 bits (857), Expect = 5e-92
 Identities = 164/263 (62%), Positives = 197/263 (74%), Gaps = 1/263 (0%)

Query: 39  PELSQPNPGPPKLQLHDVFIAVKTTRAFHRLRLELLLDTWVSRTREQTFVFTDSPDKGLQ 98
           P    P P    L   DVFIAVKTT+ FHR RL+LLL+TW+SR +E TF+FTD  D+ L 
Sbjct: 98  PADGHPRPLAEPLAPRDVFIAVKTTKKFHRARLDLLLETWISRHKEMTFIFTDGEDEALA 157

Query: 99  ERLGSHLVVTNCSAEHSHPALSCKMAAEFDTFLASGLRWFCHVDDDNYVNPRALLQLLRA 158
              G+ +V+TNCSA HS  ALSCKMA E+D F+ SG +WFCHVDDDNYVN RALL+LL +
Sbjct: 158 RHTGN-VVITNCSAAHSRQALSCKMAVEYDRFIESGRKWFCHVDDDNYVNLRALLRLLAS 216

Query: 159 FPLARDVYVGRPSLNRPIHASEPQPHNRTRLVQFWFATGGAGFCINRKLALKMAPWASGS 218
           +P  RDVYVG+PSL+RPI A E    N+ R V FWFATGGAGFCI+R LALKM+PWASG 
Sbjct: 217 YPHTRDVYVGKPSLDRPIQAMERVSENKVRPVHFWFATGGAGFCISRGLALKMSPWASGG 276

Query: 219 RFMDTSALIRLPDDCTMGYIIECKLGGRLQPSPLFHSHLETLQLLRTAQLPEQVTLSYGV 278
            FM+T+  IRLPDDCT+GYI+E  LG  L  S LFHSHLE LQ + T++L EQVTLSYG+
Sbjct: 277 HFMNTAERIRLPDDCTIGYIVEALLGVPLIRSGLFHSHLENLQQVPTSELHEQVTLSYGM 336

Query: 279 FEGKLNVIKLQGPFSPEEDPSRF 301
           FE K N + ++GPFS E DPSR+
Sbjct: 337 FENKRNAVHVKGPFSVEADPSRW 359


>gi|74271816 radical fringe [Homo sapiens]
          Length = 331

 Score =  333 bits (855), Expect = 9e-92
 Identities = 174/317 (54%), Positives = 215/317 (67%), Gaps = 5/317 (1%)

Query: 3   CRLPRGLAGALLTLLCMGLLCLRYHLNLSPQRVQGTPELSQPN-PGPPKLQLHDVFIAVK 61
           CR    LA AL  LL + L   R     +P R       + P+ P  P L+  DVFIAVK
Sbjct: 9   CRACLALAAALAALLLLPLPLPRAP---APARTPAPAPRAPPSRPAAPSLRPDDVFIAVK 65

Query: 62  TTRAFHRLRLELLLDTWVSRTREQTFVFTDSPDKGLQERLGSHLVVTNCSAEHSHPALSC 121
           TTR  H  RL LLL TW+SR R+QTF+FTD  D  L+ + G  ++ TNCSA  +  AL C
Sbjct: 66  TTRKNHGPRLRLLLRTWISRARQQTFIFTDGDDPELELQGGDRVINTNCSAVRTRQALCC 125

Query: 122 KMAAEFDTFLASGLRWFCHVDDDNYVNPRALLQLLRAFPLARDVYVGRPSLNRPIHASEP 181
           KM+ E+D F+ SG +WFCHVDDDNYVN R+LL LL +F  ++DVY+GRPSL+ PI A+E 
Sbjct: 126 KMSVEYDKFIESGRKWFCHVDDDNYVNARSLLHLLSSFSPSQDVYLGRPSLDHPIEATER 185

Query: 182 QPHNRT-RLVQFWFATGGAGFCINRKLALKMAPWASGSRFMDTSALIRLPDDCTMGYIIE 240
               RT   V+FWFATGGAGFC++R LALKM+PWAS   FM T+  +RLPDDCT+GYI+E
Sbjct: 186 VQGGRTVTTVKFWFATGGAGFCLSRGLALKMSPWASLGSFMSTAEQVRLPDDCTVGYIVE 245

Query: 241 CKLGGRLQPSPLFHSHLETLQLLRTAQLPEQVTLSYGVFEGKLNVIKLQGPFSPEEDPSR 300
             LG RL  SPLFHSHLE LQ L    L +QVTLS+G  E   NV+ + G FS  +DP+R
Sbjct: 246 GLLGARLLHSPLFHSHLENLQRLPPDTLLQQVTLSHGGPENPHNVVNVAGGFSLHQDPTR 305

Query: 301 FRSLHCLLYPDTPWCPQ 317
           F+S+HCLLYPDT WCP+
Sbjct: 306 FKSIHCLLYPDTDWCPR 322


>gi|154689817 beta 1,3-galactosyltransferase-like [Homo sapiens]
          Length = 498

 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 47/200 (23%), Positives = 77/200 (38%), Gaps = 25/200 (12%)

Query: 55  DVFIAVKTTRAFHRLRLELLLDTWVSRTREQTFVFTDSPDKGLQERLGSHLVVTNCSAEH 114
           D+F+AVKT + FH  R+ ++  TW S+     + ++D  +  +       L + N   + 
Sbjct: 268 DIFVAVKTCKKFHGDRIPIVKQTWESQASLIEY-YSDYTENSIPT---VDLGIPN--TDR 321

Query: 115 SHPALSCKMAAEFDTFLASGLRWFCHVDDDNYVNPRALLQLLRAFPLARDVYVGRPSLNR 174
            H   +  +   F         W   VDDD  ++   L  LL  +     V++G      
Sbjct: 322 GHCGKTFAILERFLNRSQDKTAWLVIVDDDTLISISRLQHLLSCYDSGEPVFLGE----- 376

Query: 175 PIHASEPQPHNRTRLVQFWFATGGAGFCINRKLALKMAPWASGSRFMDTSALIRLPDDCT 234
                  +         + + TGG G   +R+   ++   AS  R     A    PDD  
Sbjct: 377 -------RYGYGLGTGGYSYITGGGGMVFSREAVRRLL--ASKCRCYSNDA----PDDMV 423

Query: 235 MGYIIECKLGGRLQPSPLFH 254
           +G      LG  +  SPLFH
Sbjct: 424 LGMCFS-GLGIPVTHSPLFH 442


>gi|48717495 chondroitin polymerizing factor 2 [Homo sapiens]
          Length = 772

 Score = 36.6 bits (83), Expect = 0.031
 Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 12/91 (13%)

Query: 129 TFLASGLRWFCHVDDDNYVNPRALLQLLRAFPLARDVYVGRPSLNRPIHASEPQPHNRTR 188
           T   +   WF  + DD YV    L  L     + +D+Y+GR      I A E        
Sbjct: 169 THFGADYDWFFIMQDDTYVQAPRLAALAGHLSINQDLYLGR--AEEFIGAGE-------- 218

Query: 189 LVQFWFATGGAGFCINRKLALKMAPWASGSR 219
             Q  +  GG G+ ++R L L++ P   G R
Sbjct: 219 --QARYCHGGFGYLLSRSLLLRLRPHLDGCR 247


>gi|31542309 chondroitin sulfate synthase 1 [Homo sapiens]
          Length = 802

 Score = 33.9 bits (76), Expect = 0.20
 Identities = 42/181 (23%), Positives = 65/181 (35%), Gaps = 21/181 (11%)

Query: 39  PELSQPNPGPPKLQLHDVFIAVKTTRAFHRLRLELLLDTWVSRTREQTFVFTDSPDKGLQ 98
           P  S P+ GP       +F+ V T + + + R      TW S+T      F  S      
Sbjct: 72  PPGSDPDGGPRDRNF--LFVGVMTAQKYLQTRAVAAYRTW-SKTIPGKVQFFSSEGSDTS 128

Query: 99  ERLGSHLVVTNCSAEHSHPAL--SCKMAAEFDTFLASGLRWFCHVDDDNYVNPRALLQLL 156
             +    VV     + S+P    S  M             WF   DDD Y+    L   L
Sbjct: 129 VPIP---VVPLRGVDDSYPPQKKSFMMLKYMHDHYLDKYEWFMRADDDVYIKGDRLENFL 185

Query: 157 RAFPLARDVYVGRPSLNRPIH----ASEPQPHNRTRLVQFWFATGGAGFCINRKLALKMA 212
           R+   +  +++G+  L         A EP  +         F  GG G  ++R++  +M 
Sbjct: 186 RSLNSSEPLFLGQTGLGTTEEMGKLALEPGEN---------FCMGGPGVIMSREVLRRMV 236

Query: 213 P 213
           P
Sbjct: 237 P 237


>gi|74271903 chondroitin sulfate synthase 3 [Homo sapiens]
          Length = 882

 Score = 33.1 bits (74), Expect = 0.34
 Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 13/81 (16%)

Query: 137 WFCHVDDDNYVNPRALLQLLRAFPLARDVYVGRPSLNRPIHAS----EPQPHNRTRLVQF 192
           WF   DDD Y+    L + LR+   ++ +Y+G+  L           EP  +        
Sbjct: 256 WFMRADDDVYIKGDKLEEFLRSLNSSKPLYLGQTGLGNIEELGKLGLEPGEN-------- 307

Query: 193 WFATGGAGFCINRKLALKMAP 213
            F  GG G   +R++  +M P
Sbjct: 308 -FCMGGPGMIFSREVLRRMVP 327


>gi|223890230 zinc finger protein, multitype 2 [Homo sapiens]
          Length = 1151

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 20/39 (51%), Positives = 23/39 (58%), Gaps = 4/39 (10%)

Query: 230 PDDCTMGYIIECKLGGRL-QPSP---LFHSHLETLQLLR 264
           PD      II+C+  G L QPSP   LF SHL TLQ L+
Sbjct: 905 PDVSYERSIIKCEKNGNLKQPSPNGNLFSSHLATLQGLK 943


>gi|13540527 UDP-GlcNAc:betaGal
           beta-1,3-N-acetylglucosaminyltransferase 4 [Homo
           sapiens]
          Length = 378

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 32/127 (25%), Positives = 56/127 (44%), Gaps = 16/127 (12%)

Query: 142 DDDNYVNPRALLQLLRAFPLARDVYVG---RPSL-NRPIHASEPQPHNRTRLVQFWFATG 197
           DDD +V+   +L+ L  +  A+D+ VG   R +L NR        P +  R   +    G
Sbjct: 218 DDDVFVHVPNVLEFLDGWDPAQDLLVGDVIRQALPNRNTKVKYFIPPSMYRATHYPPYAG 277

Query: 198 GAGFCINRKLALKMAPWASGSRFMDTSALIRLPDDCTMGYIIECKLGGRLQPSPLFHSHL 257
           G G+ ++R    ++         M+ + L  + DD  +G  +      RL  SP+ H+  
Sbjct: 278 GGGYVMSRATVRRL------QAIMEDAELFPI-DDVFVGMCLR-----RLGLSPMHHAGF 325

Query: 258 ETLQLLR 264
           +T  + R
Sbjct: 326 KTFGIRR 332


>gi|9910144 core 1 synthase, glycoprotein-N-acetylgalactosamine
           3-beta-galactosyltransferase, 1 [Homo sapiens]
          Length = 363

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 32/110 (29%), Positives = 45/110 (40%), Gaps = 28/110 (25%)

Query: 137 WFCHVDDDNYVNPRALLQLLRAFPLARDVYVGRPSLNRPIHASEPQPHNRTRLVQFWFAT 196
           WF   DDD YV    L  LL  +     +Y GR            +P+     V+  + +
Sbjct: 164 WFLKADDDTYVILDNLRWLLSKYDPEEPIYFGR----------RFKPY-----VKQGYMS 208

Query: 197 GGAGFCINRKLALKMAPWASGSRFMDTSALIRLPDDCTMGYIIECKLGGR 246
           GGAG+ ++++ ALK        RF+D        D CT    IE    GR
Sbjct: 209 GGAGYVLSKE-ALK--------RFVDAFK----TDKCTHSSSIEDLALGR 245


>gi|110347423 spondin 1, extracellular matrix protein [Homo sapiens]
          Length = 807

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 12/37 (32%), Positives = 18/37 (48%)

Query: 173 NRPIHASEPQPHNRTRLVQFWFATGGAGFCINRKLAL 209
           N P+  +E  P  RTR+  FW A      C+  K ++
Sbjct: 127 NCPVAVTESTPRRRTRIQVFWIAPPAGTGCVILKASI 163


>gi|18087811 TRAP/Mediator complex component TRAP25 [Homo sapiens]
          Length = 178

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%)

Query: 241 CKLGGRLQPSPLFHSHLETLQLLRTAQLPEQVTLSYGVFEGKLNVIK 287
           C++G       ++ + +E  QLLR  QLP  VT   G ++ +L  ++
Sbjct: 34  CRIGQETVQDIVYRT-MEIFQLLRNMQLPNGVTYHTGTYQDRLTKLQ 79


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.325    0.140    0.450 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,124,528
Number of Sequences: 37866
Number of extensions: 673651
Number of successful extensions: 1818
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1806
Number of HSP's gapped (non-prelim): 13
length of query: 321
length of database: 18,247,518
effective HSP length: 102
effective length of query: 219
effective length of database: 14,385,186
effective search space: 3150355734
effective search space used: 3150355734
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.