Search of human proteins with 21389391

Search of human proteins with 21389391

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|21389391 hypothetical protein LOC123811 [Homo sapiens]
         (174 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|21389391 hypothetical protein LOC123811 [Homo sapiens]             345   1e-95
gi|36287110 FGFR1 oncogene partner isoform b [Homo sapiens]            46   2e-05
gi|5901954 FGFR1 oncogene partner isoform a [Homo sapiens]             46   2e-05
gi|4503179 oral-facial-digital syndrome 1 [Homo sapiens]               39   0.003
gi|156139122 CXXC finger 6 [Homo sapiens]                              31   0.47 
gi|121114302 cullin 4B isoform 2 [Homo sapiens]                        28   3.1  
gi|121114298 cullin 4B isoform 1 [Homo sapiens]                        28   3.1  
gi|122937512 myosin VIIB [Homo sapiens]                                28   3.1  
gi|30410805 CUB domain-containing protein 1 isoform 1 [Homo sapi...    28   4.0  
gi|52353330 olfactory receptor, family 52, subfamily I, member 2...    28   5.2  
gi|226958414 isovaleryl Coenzyme A dehydrogenase isoform 2 [Homo...    27   8.9  
gi|226958412 isovaleryl Coenzyme A dehydrogenase isoform 1 [Homo...    27   8.9  
gi|22902136 osterix [Homo sapiens]                                     27   8.9  
gi|153792694 baculoviral IAP repeat-containing 6 [Homo sapiens]        27   8.9  
gi|37588869 ring finger protein 123 [Homo sapiens]                     27   8.9  
gi|224282119 splicing factor, arginine/serine-rich 14 [Homo sapi...    27   8.9  
gi|224282117 splicing factor, arginine/serine-rich 14 [Homo sapi...    27   8.9  

>gi|21389391 hypothetical protein LOC123811 [Homo sapiens]
          Length = 174

 Score =  345 bits (885), Expect = 1e-95
 Identities = 174/174 (100%), Positives = 174/174 (100%)

Query: 1   MATVAELKAVLKDTLEKKGVLGHLKARIRAEVFNALDDDREPRPSLSHENLLINELIREY 60
           MATVAELKAVLKDTLEKKGVLGHLKARIRAEVFNALDDDREPRPSLSHENLLINELIREY
Sbjct: 1   MATVAELKAVLKDTLEKKGVLGHLKARIRAEVFNALDDDREPRPSLSHENLLINELIREY 60

Query: 61  LEFNKYKYTASVLIAESGQPVVPLDRQFLIHELNAFEESKDNTIPLLYGILAHFLRGTKD 120
           LEFNKYKYTASVLIAESGQPVVPLDRQFLIHELNAFEESKDNTIPLLYGILAHFLRGTKD
Sbjct: 61  LEFNKYKYTASVLIAESGQPVVPLDRQFLIHELNAFEESKDNTIPLLYGILAHFLRGTKD 120

Query: 121 GIQNAFLKGPSLQPSDPSLGRQPSRRKPMDDHLRKEEQKSTNIEDLHVSQAVNR 174
           GIQNAFLKGPSLQPSDPSLGRQPSRRKPMDDHLRKEEQKSTNIEDLHVSQAVNR
Sbjct: 121 GIQNAFLKGPSLQPSDPSLGRQPSRRKPMDDHLRKEEQKSTNIEDLHVSQAVNR 174


>gi|36287110 FGFR1 oncogene partner isoform b [Homo sapiens]
          Length = 379

 Score = 45.8 bits (107), Expect = 2e-05
 Identities = 36/118 (30%), Positives = 56/118 (47%), Gaps = 12/118 (10%)

Query: 6   ELKAVLKDTLEKKGVLGHLKARIRAEVFNALDDDR--EPRPSLSHENL----------LI 53
           EL+ +L  TLE  GVL  +KA +RA VF AL++    E +  L +E+L          L+
Sbjct: 15  ELRDLLVQTLENSGVLNRIKAELRAAVFLALEEQEKVENKTPLVNESLKKFLNTKDGRLV 74

Query: 54  NELIREYLEFNKYKYTASVLIAESGQPVVPLDRQFLIHELNAFEESKDNTIPLLYGIL 111
             L+ E+L+F    +T +V   E+        R+ L  +L   E       PLL  ++
Sbjct: 75  ASLVAEFLQFFNLDFTLAVFQPETSTLQGLEGRENLARDLGIIEAEGTVGGPLLLEVI 132


>gi|5901954 FGFR1 oncogene partner isoform a [Homo sapiens]
          Length = 399

 Score = 45.8 bits (107), Expect = 2e-05
 Identities = 36/118 (30%), Positives = 56/118 (47%), Gaps = 12/118 (10%)

Query: 6   ELKAVLKDTLEKKGVLGHLKARIRAEVFNALDDDR--EPRPSLSHENL----------LI 53
           EL+ +L  TLE  GVL  +KA +RA VF AL++    E +  L +E+L          L+
Sbjct: 15  ELRDLLVQTLENSGVLNRIKAELRAAVFLALEEQEKVENKTPLVNESLKKFLNTKDGRLV 74

Query: 54  NELIREYLEFNKYKYTASVLIAESGQPVVPLDRQFLIHELNAFEESKDNTIPLLYGIL 111
             L+ E+L+F    +T +V   E+        R+ L  +L   E       PLL  ++
Sbjct: 75  ASLVAEFLQFFNLDFTLAVFQPETSTLQGLEGRENLARDLGIIEAEGTVGGPLLLEVI 132


>gi|4503179 oral-facial-digital syndrome 1 [Homo sapiens]
          Length = 1012

 Score = 38.5 bits (88), Expect = 0.003
 Identities = 37/133 (27%), Positives = 63/133 (47%), Gaps = 27/133 (20%)

Query: 6   ELKAVLKDTLEKKGVLGHLKARIRAEVFN-----ALDDDREPRP-SLSHENLLI---NEL 56
           EL+  L  T + +G+L  LK ++R ++ +      L  + +PR  S+   +LLI   N L
Sbjct: 18  ELRKKLYQTFKDRGILDTLKTQLRNQLIHELMHPVLSGELQPRSISVEGSSLLIGASNSL 77

Query: 57  IREYLEFNKYKYTASVLIAESGQPVVPLDRQFLIHELNAFEESKDNTIPLLY-------- 108
           + ++L+   Y+Y+ SV   ESG   +  ++ F + +L   +  K N    LY        
Sbjct: 78  VADHLQRCGYEYSLSVFFPESG---LAKEKVFTMQDL--LQLIKINPTSSLYKSLVSGSD 132

Query: 109 -----GILAHFLR 116
                G L HFL+
Sbjct: 133 KENQKGFLMHFLK 145


>gi|156139122 CXXC finger 6 [Homo sapiens]
          Length = 2136

 Score = 31.2 bits (69), Expect = 0.47
 Identities = 48/203 (23%), Positives = 71/203 (34%), Gaps = 47/203 (23%)

Query: 11  LKDTLEKKGVLG---------HLKARIRAEVFNALDDDREPRPSLSHENLLINELIREYL 61
           LKDT   K  +          HLK R    VF     +    P  SH   +IN     + 
Sbjct: 794 LKDTANHKNAMSSVATDMSCDHLKGRSNVLVFQQPGFNCSSIPHSSHS--IINHHASIHN 851

Query: 62  EFNKYKYTASVLIAE--SGQPVVPL------DRQFLIHELNAFE---------------- 97
           E ++ K   ++   E   G PV P       DR+  + ++ A E                
Sbjct: 852 EGDQPKTPENIPSKEPKDGSPVQPSLLSLMKDRRLTLEQVVAIEALTQLSEAPSENSSPS 911

Query: 98  ------ESKDNTIPLLYGILAHFLRGTKDGIQNAFLKGPSLQPSDPSLGRQPSRRKPMDD 151
                 ES+  T  LL    A      KD      L+ P+LQ   P L   PS  K    
Sbjct: 912 KSEKDEESEQRTASLLNSCKAILYTVRKD------LQDPNLQGEPPKLNHCPSLEKQSSC 965

Query: 152 HLRKEEQKSTNIEDLHVSQAVNR 174
           +      ++T + + H++ A N+
Sbjct: 966 NTVVFNGQTTTLSNSHINSATNQ 988


>gi|121114302 cullin 4B isoform 2 [Homo sapiens]
          Length = 895

 Score = 28.5 bits (62), Expect = 3.1
 Identities = 26/123 (21%), Positives = 60/123 (48%), Gaps = 13/123 (10%)

Query: 14  TLEKKGVLGHLKARIRAEVFNALDDDREPRPSLSHENLL-----INELIREYLEFNKYKY 68
           T+EK+ +  HL A ++  + N LD++R    SL ++        +  L+++++E+ K  +
Sbjct: 425 TVEKQLLGEHLTAILQKGLNNLLDENRIQDLSLLYQLFSRVRGGVQVLLQQWIEYIK-AF 483

Query: 69  TASVLIAESGQPVVPLDRQFLIHELNAFEESKDNTIPLLYGILAHFLRGTKDGIQNAFLK 128
            ++++I        P   + ++ EL  F++  D+ I + +     F+   K+  +    K
Sbjct: 484 GSTIVIN-------PEKDKTMVQELLDFKDKVDHIIDICFLKNEKFINAMKEAFETFINK 536

Query: 129 GPS 131
            P+
Sbjct: 537 RPN 539


>gi|121114298 cullin 4B isoform 1 [Homo sapiens]
          Length = 913

 Score = 28.5 bits (62), Expect = 3.1
 Identities = 26/123 (21%), Positives = 60/123 (48%), Gaps = 13/123 (10%)

Query: 14  TLEKKGVLGHLKARIRAEVFNALDDDREPRPSLSHENLL-----INELIREYLEFNKYKY 68
           T+EK+ +  HL A ++  + N LD++R    SL ++        +  L+++++E+ K  +
Sbjct: 443 TVEKQLLGEHLTAILQKGLNNLLDENRIQDLSLLYQLFSRVRGGVQVLLQQWIEYIK-AF 501

Query: 69  TASVLIAESGQPVVPLDRQFLIHELNAFEESKDNTIPLLYGILAHFLRGTKDGIQNAFLK 128
            ++++I        P   + ++ EL  F++  D+ I + +     F+   K+  +    K
Sbjct: 502 GSTIVIN-------PEKDKTMVQELLDFKDKVDHIIDICFLKNEKFINAMKEAFETFINK 554

Query: 129 GPS 131
            P+
Sbjct: 555 RPN 557


>gi|122937512 myosin VIIB [Homo sapiens]
          Length = 2116

 Score = 28.5 bits (62), Expect = 3.1
 Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 11/67 (16%)

Query: 28  IRAEVFNALD----------DDREPRPSLSHENLLINELIREYLEFNKYKYTASVLIAES 77
           IRAE F  L           DD      L+   ++ N LIR Y +   Y YT S+L+A +
Sbjct: 48  IRAEDFGVLSPMHPNSVQGVDDMIRLGDLNEAGMVHNLLIR-YQQHKIYTYTGSILVAVN 106

Query: 78  GQPVVPL 84
              V+PL
Sbjct: 107 PFQVLPL 113


>gi|30410805 CUB domain-containing protein 1 isoform 1 [Homo
           sapiens]
          Length = 836

 Score = 28.1 bits (61), Expect = 4.0
 Identities = 12/28 (42%), Positives = 17/28 (60%)

Query: 27  RIRAEVFNALDDDREPRPSLSHENLLIN 54
           R RAE   +LD+D  P+PS  H +  +N
Sbjct: 612 RTRAEEIFSLDEDVLPKPSFHHHSFWVN 639


>gi|52353330 olfactory receptor, family 52, subfamily I, member 2
           [Homo sapiens]
          Length = 350

 Score = 27.7 bits (60), Expect = 5.2
 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 2/47 (4%)

Query: 70  ASVLIAESGQPVVPLDRQFLIHELNAFEESKDNTIPLLYGILAHFLR 116
           AS+  A  GQ VVPL  Q L+ +L     +  N  P++YG+    LR
Sbjct: 287 ASIYAAWLGQDVVPLHTQVLLADLYVIIPATLN--PIIYGMRTKQLR 331


>gi|226958414 isovaleryl Coenzyme A dehydrogenase isoform 2 [Homo
           sapiens]
          Length = 396

 Score = 26.9 bits (58), Expect = 8.9
 Identities = 12/30 (40%), Positives = 17/30 (56%)

Query: 47  SHENLLINELIREYLEFNKYKYTASVLIAE 76
           +H NL IN+L+R   E  K KY   ++  E
Sbjct: 101 AHSNLCINQLVRNGNEAQKEKYLPKLISGE 130


>gi|226958412 isovaleryl Coenzyme A dehydrogenase isoform 1 [Homo
           sapiens]
          Length = 426

 Score = 26.9 bits (58), Expect = 8.9
 Identities = 12/30 (40%), Positives = 17/30 (56%)

Query: 47  SHENLLINELIREYLEFNKYKYTASVLIAE 76
           +H NL IN+L+R   E  K KY   ++  E
Sbjct: 131 AHSNLCINQLVRNGNEAQKEKYLPKLISGE 160


>gi|22902136 osterix [Homo sapiens]
          Length = 431

 Score = 26.9 bits (58), Expect = 8.9
 Identities = 12/35 (34%), Positives = 18/35 (51%)

Query: 116 RGTKDGIQNAFLKGPSLQPSDPSLGRQPSRRKPMD 150
           +G  DG+Q     GP+  P +P L   PS   P++
Sbjct: 172 QGQGDGLQGTLPTGPAQPPLNPQLPTYPSDFAPLN 206


>gi|153792694 baculoviral IAP repeat-containing 6 [Homo sapiens]
          Length = 4857

 Score = 26.9 bits (58), Expect = 8.9
 Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 3/54 (5%)

Query: 75   AESGQPVVPLDRQFLIHELNAFEESKDNTIPLLYGILAHFLRGTKDGIQNAFLK 128
            A SG     L+   L   LN    S D+TI +LY +      GTKD IQ A LK
Sbjct: 3405 AASGSDPTDLNSPLLFGRLNGL--SSDSTIDILYQLGTTQDPGTKDRIQ-ALLK 3455


>gi|37588869 ring finger protein 123 [Homo sapiens]
          Length = 1314

 Score = 26.9 bits (58), Expect = 8.9
 Identities = 12/44 (27%), Positives = 24/44 (54%)

Query: 4   VAELKAVLKDTLEKKGVLGHLKARIRAEVFNALDDDREPRPSLS 47
           ++ L+  LKD L  K  +      +++   + LD+D EP P+++
Sbjct: 609 LSHLRKTLKDDLASKANIVIDPLELQSTAMDDLDEDEEPAPAMA 652


>gi|224282119 splicing factor, arginine/serine-rich 14 [Homo
           sapiens]
          Length = 1082

 Score = 26.9 bits (58), Expect = 8.9
 Identities = 13/41 (31%), Positives = 22/41 (53%)

Query: 107 LYGILAHFLRGTKDGIQNAFLKGPSLQPSDPSLGRQPSRRK 147
           L G +AH     ++G+++    GPS + S+PS+      RK
Sbjct: 65  LSGSVAHSRDAGREGLRSDVFPGPSFRSSNPSISDDSYFRK 105


>gi|224282117 splicing factor, arginine/serine-rich 14 [Homo
           sapiens]
          Length = 1082

 Score = 26.9 bits (58), Expect = 8.9
 Identities = 13/41 (31%), Positives = 22/41 (53%)

Query: 107 LYGILAHFLRGTKDGIQNAFLKGPSLQPSDPSLGRQPSRRK 147
           L G +AH     ++G+++    GPS + S+PS+      RK
Sbjct: 65  LSGSVAHSRDAGREGLRSDVFPGPSFRSSNPSISDDSYFRK 105


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.135    0.375 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,563,080
Number of Sequences: 37866
Number of extensions: 292627
Number of successful extensions: 896
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 883
Number of HSP's gapped (non-prelim): 17
length of query: 174
length of database: 18,247,518
effective HSP length: 95
effective length of query: 79
effective length of database: 14,650,248
effective search space: 1157369592
effective search space used: 1157369592
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.