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Search of human proteins with 21361861
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|21361861 Fanconi anemia complementation group D2 isoform a
[Homo sapiens]
(1471 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|21361861 Fanconi anemia complementation group D2 isoform a [H... 2898 0.0
gi|66528888 Fanconi anemia complementation group D2 isoform b [H... 2802 0.0
gi|82830440 Fanconi anemia, complementation group I isoform 2 [H... 39 0.037
gi|39932589 Rho GTPase activating protein 18 [Homo sapiens] 38 0.082
gi|164607124 Fanconi anemia, complementation group I isoform 1 [... 36 0.24
gi|12383082 DNA cross-link repair 1B (PSO2 homolog, S. cerevisia... 35 0.70
gi|153791497 ciliary rootlet coiled-coil [Homo sapiens] 34 1.2
gi|124248554 melanoma antigen family A, 9 -like [Homo sapiens] 33 2.0
gi|4885473 melanoma antigen family A, 9 [Homo sapiens] 33 2.0
gi|62243696 stromal antigen 1 [Homo sapiens] 33 2.0
gi|134948605 ankyrin repeat domain 12 isoform 2 [Homo sapiens] 33 2.6
gi|134948558 ankyrin repeat domain 12 isoform 1 [Homo sapiens] 33 2.6
gi|46249349 homer 2 isoform 1 [Homo sapiens] 33 2.6
gi|94557295 mitogen-activated protein kinase 8 interacting prote... 33 2.6
gi|154240686 FYVE, RhoGEF and PH domain containing 6 [Homo sapiens] 33 2.6
gi|38327039 heat shock 70kDa protein 4 [Homo sapiens] 32 3.5
gi|205360925 mucin 15 isoform c [Homo sapiens] 32 3.5
gi|205360923 mucin 15 isoform a [Homo sapiens] 32 3.5
gi|4504195 general transcription factor IIE, polypeptide 2, beta... 32 4.5
gi|5803145 ralA binding protein 1 [Homo sapiens] 32 4.5
gi|90963001 hypothetical protein LOC170063 [Homo sapiens] 32 4.5
gi|110349794 homer 2 isoform 3 [Homo sapiens] 32 5.9
gi|219842214 protein phosphatase 1, regulatory (inhibitor) subun... 31 7.7
gi|219842212 protein phosphatase 1, regulatory (inhibitor) subun... 31 7.7
gi|4505317 protein phosphatase 1, regulatory (inhibitor) subunit... 31 7.7
gi|21269877 cysteinyl-tRNA synthetase isoform a [Homo sapiens] 31 7.7
gi|62240994 cysteinyl-tRNA synthetase isoform d [Homo sapiens] 31 7.7
gi|62240992 cysteinyl-tRNA synthetase isoform c [Homo sapiens] 31 7.7
gi|10835051 cysteinyl-tRNA synthetase isoform b [Homo sapiens] 31 7.7
gi|170650672 Leber congenital amaurosis 5 [Homo sapiens] 31 7.7
>gi|21361861 Fanconi anemia complementation group D2 isoform a [Homo
sapiens]
Length = 1471
Score = 2899 bits (7514), Expect = 0.0
Identities = 1471/1471 (100%), Positives = 1471/1471 (100%)
Query: 1 MVSKRRLSKSEDKESLTEDASKTRKQPLSKKTKKSHIANEVEENDSIFVKLLKISGIILK 60
MVSKRRLSKSEDKESLTEDASKTRKQPLSKKTKKSHIANEVEENDSIFVKLLKISGIILK
Sbjct: 1 MVSKRRLSKSEDKESLTEDASKTRKQPLSKKTKKSHIANEVEENDSIFVKLLKISGIILK 60
Query: 61 TGESQNQLAVDQIAFQKKLFQTLRRHPSYPKIIEEFVSGLESYIEDEDSFRNCLLSCERL 120
TGESQNQLAVDQIAFQKKLFQTLRRHPSYPKIIEEFVSGLESYIEDEDSFRNCLLSCERL
Sbjct: 61 TGESQNQLAVDQIAFQKKLFQTLRRHPSYPKIIEEFVSGLESYIEDEDSFRNCLLSCERL 120
Query: 121 QDEEASMGASYSKSLIKLLLGIDILQPAIIKTLFEKLPEYFFENKNSDEINIPRLIVSQL 180
QDEEASMGASYSKSLIKLLLGIDILQPAIIKTLFEKLPEYFFENKNSDEINIPRLIVSQL
Sbjct: 121 QDEEASMGASYSKSLIKLLLGIDILQPAIIKTLFEKLPEYFFENKNSDEINIPRLIVSQL 180
Query: 181 KWLDRVVDGKDLTTKIMQLISIAPENLQHDIITSLPEILGDSQHADVGKELSDLLIENTS 240
KWLDRVVDGKDLTTKIMQLISIAPENLQHDIITSLPEILGDSQHADVGKELSDLLIENTS
Sbjct: 181 KWLDRVVDGKDLTTKIMQLISIAPENLQHDIITSLPEILGDSQHADVGKELSDLLIENTS 240
Query: 241 LTVPILDVLSSLRLDPNFLLKVRQLVMDKLSSIRLEDLPVIIKFILHSVTAMDTLEVISE 300
LTVPILDVLSSLRLDPNFLLKVRQLVMDKLSSIRLEDLPVIIKFILHSVTAMDTLEVISE
Sbjct: 241 LTVPILDVLSSLRLDPNFLLKVRQLVMDKLSSIRLEDLPVIIKFILHSVTAMDTLEVISE 300
Query: 301 LREKLDLQHCVLPSRLQASQVKLKSKGRASSSGNQESSGQSCIILLFDVIKSAIRYEKTI 360
LREKLDLQHCVLPSRLQASQVKLKSKGRASSSGNQESSGQSCIILLFDVIKSAIRYEKTI
Sbjct: 301 LREKLDLQHCVLPSRLQASQVKLKSKGRASSSGNQESSGQSCIILLFDVIKSAIRYEKTI 360
Query: 361 SEAWIKAIENTASVSEHKVFDLVMLFIIYSTNTQTKKYIDRVLRNKIRSGCIQEQLLQST 420
SEAWIKAIENTASVSEHKVFDLVMLFIIYSTNTQTKKYIDRVLRNKIRSGCIQEQLLQST
Sbjct: 361 SEAWIKAIENTASVSEHKVFDLVMLFIIYSTNTQTKKYIDRVLRNKIRSGCIQEQLLQST 420
Query: 421 FSVHYLVLKDMCSSILSLAQSLLHSLDQSIISFGSLLYKYAFKFFDTYCQQEVVGALVTH 480
FSVHYLVLKDMCSSILSLAQSLLHSLDQSIISFGSLLYKYAFKFFDTYCQQEVVGALVTH
Sbjct: 421 FSVHYLVLKDMCSSILSLAQSLLHSLDQSIISFGSLLYKYAFKFFDTYCQQEVVGALVTH 480
Query: 481 ICSGNEAEVDTALDVLLELVVLNPSAMMMNAVFVKGILDYLDNISPQQIRKLFYVLSTLA 540
ICSGNEAEVDTALDVLLELVVLNPSAMMMNAVFVKGILDYLDNISPQQIRKLFYVLSTLA
Sbjct: 481 ICSGNEAEVDTALDVLLELVVLNPSAMMMNAVFVKGILDYLDNISPQQIRKLFYVLSTLA 540
Query: 541 FSKQNEASSHIQDDMHLVIRKQLSSTVFKYKLIGIIGAVTMAGIMAADRSESPSLTQERA 600
FSKQNEASSHIQDDMHLVIRKQLSSTVFKYKLIGIIGAVTMAGIMAADRSESPSLTQERA
Sbjct: 541 FSKQNEASSHIQDDMHLVIRKQLSSTVFKYKLIGIIGAVTMAGIMAADRSESPSLTQERA 600
Query: 601 NLSDEQCTQVTSLLQLVHSCSEQSPQASALYYDEFANLIQHEKLDPKALEWVGHTICNDF 660
NLSDEQCTQVTSLLQLVHSCSEQSPQASALYYDEFANLIQHEKLDPKALEWVGHTICNDF
Sbjct: 601 NLSDEQCTQVTSLLQLVHSCSEQSPQASALYYDEFANLIQHEKLDPKALEWVGHTICNDF 660
Query: 661 QDAFVVDSCVVPEGDFPFPVKALYGLEEYDTQDGIAINLLPLLFSQDFAKDGGPVTSQES 720
QDAFVVDSCVVPEGDFPFPVKALYGLEEYDTQDGIAINLLPLLFSQDFAKDGGPVTSQES
Sbjct: 661 QDAFVVDSCVVPEGDFPFPVKALYGLEEYDTQDGIAINLLPLLFSQDFAKDGGPVTSQES 720
Query: 721 GQKLVSPLCLAPYFRLLRLCVERQHNGNLEEIDGLLDCPIFLTDLEPGEKLESMSAKERS 780
GQKLVSPLCLAPYFRLLRLCVERQHNGNLEEIDGLLDCPIFLTDLEPGEKLESMSAKERS
Sbjct: 721 GQKLVSPLCLAPYFRLLRLCVERQHNGNLEEIDGLLDCPIFLTDLEPGEKLESMSAKERS 780
Query: 781 FMCSLIFLTLNWFREIVNAFCQETSPEMKGKVLTRLKHIVELQIILEKYLAVTPDYVPPL 840
FMCSLIFLTLNWFREIVNAFCQETSPEMKGKVLTRLKHIVELQIILEKYLAVTPDYVPPL
Sbjct: 781 FMCSLIFLTLNWFREIVNAFCQETSPEMKGKVLTRLKHIVELQIILEKYLAVTPDYVPPL 840
Query: 841 GNFDVETLDITPHTVTAISAKIRKKGKIERKQKTDGSKTSSSDTLSEEKNSECDPTPSHR 900
GNFDVETLDITPHTVTAISAKIRKKGKIERKQKTDGSKTSSSDTLSEEKNSECDPTPSHR
Sbjct: 841 GNFDVETLDITPHTVTAISAKIRKKGKIERKQKTDGSKTSSSDTLSEEKNSECDPTPSHR 900
Query: 901 GQLNKEFTGKEEKTSLLLHNSHAFFRELDIEVFSILHCGLVTKFILDTEMHTEATEVVQL 960
GQLNKEFTGKEEKTSLLLHNSHAFFRELDIEVFSILHCGLVTKFILDTEMHTEATEVVQL
Sbjct: 901 GQLNKEFTGKEEKTSLLLHNSHAFFRELDIEVFSILHCGLVTKFILDTEMHTEATEVVQL 960
Query: 961 GPPELLFLLEDLSQKLESMLTPPIARRVPFLKNKGSRNIGFSHLQQRSAQEIVHCVFQLL 1020
GPPELLFLLEDLSQKLESMLTPPIARRVPFLKNKGSRNIGFSHLQQRSAQEIVHCVFQLL
Sbjct: 961 GPPELLFLLEDLSQKLESMLTPPIARRVPFLKNKGSRNIGFSHLQQRSAQEIVHCVFQLL 1020
Query: 1021 TPMCNHLENIHNYFQCLAAENHGVVDGPGVKVQEYHIMSSCYQRLLQIFHGLFAWSGFSQ 1080
TPMCNHLENIHNYFQCLAAENHGVVDGPGVKVQEYHIMSSCYQRLLQIFHGLFAWSGFSQ
Sbjct: 1021 TPMCNHLENIHNYFQCLAAENHGVVDGPGVKVQEYHIMSSCYQRLLQIFHGLFAWSGFSQ 1080
Query: 1081 PENQNLLYSALHVLSSRLKQGEHSQPLEELLSQSVHYLQNFHQSIPSFQCALYLIRLLMV 1140
PENQNLLYSALHVLSSRLKQGEHSQPLEELLSQSVHYLQNFHQSIPSFQCALYLIRLLMV
Sbjct: 1081 PENQNLLYSALHVLSSRLKQGEHSQPLEELLSQSVHYLQNFHQSIPSFQCALYLIRLLMV 1140
Query: 1141 ILEKSTASAQNKEKIASLARQFLCRVWPSGDKEKSNISNDQLHALLCIYLEHTESILKAI 1200
ILEKSTASAQNKEKIASLARQFLCRVWPSGDKEKSNISNDQLHALLCIYLEHTESILKAI
Sbjct: 1141 ILEKSTASAQNKEKIASLARQFLCRVWPSGDKEKSNISNDQLHALLCIYLEHTESILKAI 1200
Query: 1201 EEIAGVGVPELINSPKDASSSTFPTLTRHTFVVFFRVMMAELEKTVKKIEPGTAADSQQI 1260
EEIAGVGVPELINSPKDASSSTFPTLTRHTFVVFFRVMMAELEKTVKKIEPGTAADSQQI
Sbjct: 1201 EEIAGVGVPELINSPKDASSSTFPTLTRHTFVVFFRVMMAELEKTVKKIEPGTAADSQQI 1260
Query: 1261 HEEKLLYWNMAVRDFSILINLIKVFDSHPVLHVCLKYGRLFVEAFLKQCMPLLDFSFRKH 1320
HEEKLLYWNMAVRDFSILINLIKVFDSHPVLHVCLKYGRLFVEAFLKQCMPLLDFSFRKH
Sbjct: 1261 HEEKLLYWNMAVRDFSILINLIKVFDSHPVLHVCLKYGRLFVEAFLKQCMPLLDFSFRKH 1320
Query: 1321 REDVLSLLETFQLDTRLLHHLCGHSKIHQDTRLTQHVPLLKKTLELLVCRVKAMLTLNNC 1380
REDVLSLLETFQLDTRLLHHLCGHSKIHQDTRLTQHVPLLKKTLELLVCRVKAMLTLNNC
Sbjct: 1321 REDVLSLLETFQLDTRLLHHLCGHSKIHQDTRLTQHVPLLKKTLELLVCRVKAMLTLNNC 1380
Query: 1381 REAFWLGNLKNRDLQGEEIKSQNSQESTADESEDDMSSQASKSKATEVSLQNPPESGTDG 1440
REAFWLGNLKNRDLQGEEIKSQNSQESTADESEDDMSSQASKSKATEVSLQNPPESGTDG
Sbjct: 1381 REAFWLGNLKNRDLQGEEIKSQNSQESTADESEDDMSSQASKSKATEVSLQNPPESGTDG 1440
Query: 1441 CILLIVLSWWSRTLPTYVYCQMLLCPFPFPP 1471
CILLIVLSWWSRTLPTYVYCQMLLCPFPFPP
Sbjct: 1441 CILLIVLSWWSRTLPTYVYCQMLLCPFPFPP 1471
>gi|66528888 Fanconi anemia complementation group D2 isoform b [Homo
sapiens]
Length = 1451
Score = 2802 bits (7263), Expect = 0.0
Identities = 1428/1437 (99%), Positives = 1431/1437 (99%)
Query: 1 MVSKRRLSKSEDKESLTEDASKTRKQPLSKKTKKSHIANEVEENDSIFVKLLKISGIILK 60
MVSKRRLSKSEDKESLTEDASKTRKQPLSKKTKKSHIANEVEENDSIFVKLLKISGIILK
Sbjct: 1 MVSKRRLSKSEDKESLTEDASKTRKQPLSKKTKKSHIANEVEENDSIFVKLLKISGIILK 60
Query: 61 TGESQNQLAVDQIAFQKKLFQTLRRHPSYPKIIEEFVSGLESYIEDEDSFRNCLLSCERL 120
TGESQNQLAVDQIAFQKKLFQTLRRHPSYPKIIEEFVSGLESYIEDEDSFRNCLLSCERL
Sbjct: 61 TGESQNQLAVDQIAFQKKLFQTLRRHPSYPKIIEEFVSGLESYIEDEDSFRNCLLSCERL 120
Query: 121 QDEEASMGASYSKSLIKLLLGIDILQPAIIKTLFEKLPEYFFENKNSDEINIPRLIVSQL 180
QDEEASMGASYSKSLIKLLLGIDILQPAIIKTLFEKLPEYFFENKNSDEINIPRLIVSQL
Sbjct: 121 QDEEASMGASYSKSLIKLLLGIDILQPAIIKTLFEKLPEYFFENKNSDEINIPRLIVSQL 180
Query: 181 KWLDRVVDGKDLTTKIMQLISIAPENLQHDIITSLPEILGDSQHADVGKELSDLLIENTS 240
KWLDRVVDGKDLTTKIMQLISIAPENLQHDIITSLPEILGDSQHADVGKELSDLLIENTS
Sbjct: 181 KWLDRVVDGKDLTTKIMQLISIAPENLQHDIITSLPEILGDSQHADVGKELSDLLIENTS 240
Query: 241 LTVPILDVLSSLRLDPNFLLKVRQLVMDKLSSIRLEDLPVIIKFILHSVTAMDTLEVISE 300
LTVPILDVLSSLRLDPNFLLKVRQLVMDKLSSIRLEDLPVIIKFILHSVTAMDTLEVISE
Sbjct: 241 LTVPILDVLSSLRLDPNFLLKVRQLVMDKLSSIRLEDLPVIIKFILHSVTAMDTLEVISE 300
Query: 301 LREKLDLQHCVLPSRLQASQVKLKSKGRASSSGNQESSGQSCIILLFDVIKSAIRYEKTI 360
LREKLDLQHCVLPSRLQASQVKLKSKGRASSSGNQESSGQSCIILLFDVIKSAIRYEKTI
Sbjct: 301 LREKLDLQHCVLPSRLQASQVKLKSKGRASSSGNQESSGQSCIILLFDVIKSAIRYEKTI 360
Query: 361 SEAWIKAIENTASVSEHKVFDLVMLFIIYSTNTQTKKYIDRVLRNKIRSGCIQEQLLQST 420
SEAWIKAIENTASVSEHKVFDLVMLFIIYSTNTQTKKYIDRVLRNKIRSGCIQEQLLQST
Sbjct: 361 SEAWIKAIENTASVSEHKVFDLVMLFIIYSTNTQTKKYIDRVLRNKIRSGCIQEQLLQST 420
Query: 421 FSVHYLVLKDMCSSILSLAQSLLHSLDQSIISFGSLLYKYAFKFFDTYCQQEVVGALVTH 480
FSVHYLVLKDMCSSILSLAQSLLHSLDQSIISFGSLLYKYAFKFFDTYCQQEVVGALVTH
Sbjct: 421 FSVHYLVLKDMCSSILSLAQSLLHSLDQSIISFGSLLYKYAFKFFDTYCQQEVVGALVTH 480
Query: 481 ICSGNEAEVDTALDVLLELVVLNPSAMMMNAVFVKGILDYLDNISPQQIRKLFYVLSTLA 540
ICSGNEAEVDTALDVLLELVVLNPSAMMMNAVFVKGILDYLDNISPQQIRKLFYVLSTLA
Sbjct: 481 ICSGNEAEVDTALDVLLELVVLNPSAMMMNAVFVKGILDYLDNISPQQIRKLFYVLSTLA 540
Query: 541 FSKQNEASSHIQDDMHLVIRKQLSSTVFKYKLIGIIGAVTMAGIMAADRSESPSLTQERA 600
FSKQNEASSHIQDDMHLVIRKQLSSTVFKYKLIGIIGAVTMAGIMAADRSESPSLTQERA
Sbjct: 541 FSKQNEASSHIQDDMHLVIRKQLSSTVFKYKLIGIIGAVTMAGIMAADRSESPSLTQERA 600
Query: 601 NLSDEQCTQVTSLLQLVHSCSEQSPQASALYYDEFANLIQHEKLDPKALEWVGHTICNDF 660
NLSDEQCTQVTSLLQLVHSCSEQSPQASALYYDEFANLIQHEKLDPKALEWVGHTICNDF
Sbjct: 601 NLSDEQCTQVTSLLQLVHSCSEQSPQASALYYDEFANLIQHEKLDPKALEWVGHTICNDF 660
Query: 661 QDAFVVDSCVVPEGDFPFPVKALYGLEEYDTQDGIAINLLPLLFSQDFAKDGGPVTSQES 720
QDAFVVDSCVVPEGDFPFPVKALYGLEEYDTQDGIAINLLPLLFSQDFAKDGGPVTSQES
Sbjct: 661 QDAFVVDSCVVPEGDFPFPVKALYGLEEYDTQDGIAINLLPLLFSQDFAKDGGPVTSQES 720
Query: 721 GQKLVSPLCLAPYFRLLRLCVERQHNGNLEEIDGLLDCPIFLTDLEPGEKLESMSAKERS 780
GQKLVSPLCLAPYFRLLRLCVERQHNGNLEEIDGLLDCPIFLTDLEPGEKLESMSAKERS
Sbjct: 721 GQKLVSPLCLAPYFRLLRLCVERQHNGNLEEIDGLLDCPIFLTDLEPGEKLESMSAKERS 780
Query: 781 FMCSLIFLTLNWFREIVNAFCQETSPEMKGKVLTRLKHIVELQIILEKYLAVTPDYVPPL 840
FMCSLIFLTLNWFREIVNAFCQETSPEMKGKVLTRLKHIVELQIILEKYLAVTPDYVPPL
Sbjct: 781 FMCSLIFLTLNWFREIVNAFCQETSPEMKGKVLTRLKHIVELQIILEKYLAVTPDYVPPL 840
Query: 841 GNFDVETLDITPHTVTAISAKIRKKGKIERKQKTDGSKTSSSDTLSEEKNSECDPTPSHR 900
GNFDVETLDITPHTVTAISAKIRKKGKIERKQKTDGSKTSSSDTLSEEKNSECDPTPSHR
Sbjct: 841 GNFDVETLDITPHTVTAISAKIRKKGKIERKQKTDGSKTSSSDTLSEEKNSECDPTPSHR 900
Query: 901 GQLNKEFTGKEEKTSLLLHNSHAFFRELDIEVFSILHCGLVTKFILDTEMHTEATEVVQL 960
GQLNKEFTGKEEKTSLLLHNSHAFFRELDIEVFSILHCGLVTKFILDTEMHTEATEVVQL
Sbjct: 901 GQLNKEFTGKEEKTSLLLHNSHAFFRELDIEVFSILHCGLVTKFILDTEMHTEATEVVQL 960
Query: 961 GPPELLFLLEDLSQKLESMLTPPIARRVPFLKNKGSRNIGFSHLQQRSAQEIVHCVFQLL 1020
GPPELLFLLEDLSQKLESMLTPPIARRVPFLKNKGSRNIGFSHLQQRSAQEIVHCVFQLL
Sbjct: 961 GPPELLFLLEDLSQKLESMLTPPIARRVPFLKNKGSRNIGFSHLQQRSAQEIVHCVFQLL 1020
Query: 1021 TPMCNHLENIHNYFQCLAAENHGVVDGPGVKVQEYHIMSSCYQRLLQIFHGLFAWSGFSQ 1080
TPMCNHLENIHNYFQCLAAENHGVVDGPGVKVQEYHIMSSCYQRLLQIFHGLFAWSGFSQ
Sbjct: 1021 TPMCNHLENIHNYFQCLAAENHGVVDGPGVKVQEYHIMSSCYQRLLQIFHGLFAWSGFSQ 1080
Query: 1081 PENQNLLYSALHVLSSRLKQGEHSQPLEELLSQSVHYLQNFHQSIPSFQCALYLIRLLMV 1140
PENQNLLYSALHVLSSRLKQGEHSQPLEELLSQSVHYLQNFHQSIPSFQCALYLIRLLMV
Sbjct: 1081 PENQNLLYSALHVLSSRLKQGEHSQPLEELLSQSVHYLQNFHQSIPSFQCALYLIRLLMV 1140
Query: 1141 ILEKSTASAQNKEKIASLARQFLCRVWPSGDKEKSNISNDQLHALLCIYLEHTESILKAI 1200
ILEKSTASAQNKEKIASLARQFLCRVWPSGDKEKSNISNDQLHALLCIYLEHTESILKAI
Sbjct: 1141 ILEKSTASAQNKEKIASLARQFLCRVWPSGDKEKSNISNDQLHALLCIYLEHTESILKAI 1200
Query: 1201 EEIAGVGVPELINSPKDASSSTFPTLTRHTFVVFFRVMMAELEKTVKKIEPGTAADSQQI 1260
EEIAGVGVPELINSPKDASSSTFPTLTRHTFVVFFRVMMAELEKTVKKIEPGTAADSQQI
Sbjct: 1201 EEIAGVGVPELINSPKDASSSTFPTLTRHTFVVFFRVMMAELEKTVKKIEPGTAADSQQI 1260
Query: 1261 HEEKLLYWNMAVRDFSILINLIKVFDSHPVLHVCLKYGRLFVEAFLKQCMPLLDFSFRKH 1320
HEEKLLYWNMAVRDFSILINLIKVFDSHPVLHVCLKYGRLFVEAFLKQCMPLLDFSFRKH
Sbjct: 1261 HEEKLLYWNMAVRDFSILINLIKVFDSHPVLHVCLKYGRLFVEAFLKQCMPLLDFSFRKH 1320
Query: 1321 REDVLSLLETFQLDTRLLHHLCGHSKIHQDTRLTQHVPLLKKTLELLVCRVKAMLTLNNC 1380
REDVLSLLETFQLDTRLLHHLCGHSKIHQDTRLTQHVPLLKKTLELLVCRVKAMLTLNNC
Sbjct: 1321 REDVLSLLETFQLDTRLLHHLCGHSKIHQDTRLTQHVPLLKKTLELLVCRVKAMLTLNNC 1380
Query: 1381 REAFWLGNLKNRDLQGEEIKSQNSQESTADESEDDMSSQASKSKATEVSLQNPPESG 1437
REAFWLGNLKNRDLQGEEIKSQNSQESTADESEDDMSSQASKSKATE ++ +G
Sbjct: 1381 REAFWLGNLKNRDLQGEEIKSQNSQESTADESEDDMSSQASKSKATEDGEEDEVSAG 1437
>gi|82830440 Fanconi anemia, complementation group I isoform 2 [Homo
sapiens]
Length = 1268
Score = 38.9 bits (89), Expect = 0.037
Identities = 88/488 (18%), Positives = 189/488 (38%), Gaps = 86/488 (17%)
Query: 436 LSLAQSLLHSLDQSIISFGSLLYKYAFKFFDTYCQQEVVGALVTHICSGNEAEVDTALDV 495
+ + SL +Q G+ + FK + +QE++ ++ + + + + LD+
Sbjct: 404 IETSPSLSRMPNQHACKLGANILLETFKIHEMI-RQEILEQVLNRVVTRASSPISHFLDL 462
Query: 496 LLELVVLNPSAMMMNAVFVKGILDYLDNISPQQIRKLFYVLSTLAFSKQNEASSHIQDDM 555
L +V+ P + + V DYL + Q +++L + L + S ++D +
Sbjct: 463 LSNIVMYAPLVLQSCSSKVTEAFDYLSFLPLQTVQRLLKAVQPLL-----KVSMSMRDCL 517
Query: 556 HLVIRKQLSSTVFKYKLIGIIGAV-------TMAGIMAADRSESPSLTQERANLSD--EQ 606
LV+RK + + + + G + + + ++ S+S S++Q ++
Sbjct: 518 ILVLRKAMFANQLDARKSAVAGFLLLLKNFKVLGSLSSSQCSQSLSVSQVHVDVHSHYNS 577
Query: 607 CTQVTSLLQLVHS---CSEQSPQASALYYDEFANLIQHEKLDPKALEWVGHTICN----- 658
T L+++ S C Q + Y+ F ++++ + + V T+ +
Sbjct: 578 VANETFCLEIMDSLRRCLSQQADVRLMLYEGFYDVLRR---NSQLANSVMQTLLSQLKQF 634
Query: 659 -----DFQDAFVVDSCVVPEGD---FPFPVKAL-------------------YGLEEYDT 691
D +++C++ +GD P+ L G EE +
Sbjct: 635 YEPKPDLLPPLKLEACILTQGDKISLQEPLDYLLCCIQHCLAWYKNTVIPLQQGEEEEEE 694
Query: 692 QDGIAINLLPLLFS----------QDFAKDGGPVTSQESGQKLVSPLCLAPYFRLLRLCV 741
++ +L +L S +DF D SQ + + + +C + + +
Sbjct: 695 EEAFYEDLDDILESITNRMIKSELEDFELDKSADFSQSTSIGIKNNICAFLVMGVCEVLI 754
Query: 742 ERQHN------GNLEEIDGLLDCPIFLTDL--EPGEKLESMSAKERS-------FMCSL- 785
E + E+I L C L+D+ E K ++ A + S F+ SL
Sbjct: 755 EYNFSISSFSKNRFEDILSLFMCYKKLSDILNEKAGKAKTKMANKTSDSLLSMKFVSSLL 814
Query: 786 --IFLTLNWFREIVNAFCQETSPEMKGKVLTRLKHIVELQIILEKYLAVTPDYVPPLGNF 843
+F L W + +E+ + KGK ++ ++ L+ + + + AV Y P + F
Sbjct: 815 TALFRVLLWRYTSIPTSVEESGKKEKGKSIS----LLCLEGLQKIFSAVQQFYQPKIQQF 870
Query: 844 DVETLDIT 851
+ LD+T
Sbjct: 871 -LRALDVT 877
>gi|39932589 Rho GTPase activating protein 18 [Homo sapiens]
Length = 663
Score = 37.7 bits (86), Expect = 0.082
Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 25/142 (17%)
Query: 1040 ENHGVVDGPGVKVQEYHIMSSCYQRLLQIFHGLFAWSGFSQPENQNLLYSALHVLSSRLK 1099
E G++ PG ++ I + C + + + G F W Q + +LL +L
Sbjct: 359 ETEGLLRIPGAAIR---IKNLCQELEAKFYEGTFNWESVKQHDAASLL---------KLF 406
Query: 1100 QGEHSQPLEELLSQSVHYLQNFH--QSIPSFQCALYLIRLLMVILEKSTASAQNKEKIAS 1157
E QPL SV YL+ F Q++P+ + L + LL+++L + N++ + +
Sbjct: 407 IRELPQPL-----LSVEYLKAFQAVQNLPTKKQQLQALNLLVILLPDA-----NRDTLKA 456
Query: 1158 LARQFLCRVWPSGDKEKSNISN 1179
L +FL RV + +K K + N
Sbjct: 457 LL-EFLQRVIDNKEKNKMTVMN 477
>gi|164607124 Fanconi anemia, complementation group I isoform 1
[Homo sapiens]
Length = 1328
Score = 36.2 bits (82), Expect = 0.24
Identities = 38/217 (17%), Positives = 91/217 (41%), Gaps = 18/217 (8%)
Query: 436 LSLAQSLLHSLDQSIISFGSLLYKYAFKFFDTYCQQEVVGALVTHICSGNEAEVDTALDV 495
+ + SL +Q G+ + FK + +QE++ ++ + + + + LD+
Sbjct: 404 IETSPSLSRMPNQHACKLGANILLETFKIHEMI-RQEILEQVLNRVVTRASSPISHFLDL 462
Query: 496 LLELVVLNPSAMMMNAVFVKGILDYLDNISPQQIRKLFYVLSTLAFSKQNEASSHIQDDM 555
L +V+ P + + V DYL + Q +++L + L + S ++D +
Sbjct: 463 LSNIVMYAPLVLQSCSSKVTEAFDYLSFLPLQTVQRLLKAVQPLL-----KVSMSMRDCL 517
Query: 556 HLVIRKQLSSTVFKYKLIGIIGAV-------TMAGIMAADRSESPSLTQERANLSD--EQ 606
LV+RK + + + + G + + + ++ S+S S++Q ++
Sbjct: 518 ILVLRKAMFANQLDARKSAVAGFLLLLKNFKVLGSLSSSQCSQSLSVSQVHVDVHSHYNS 577
Query: 607 CTQVTSLLQLVHS---CSEQSPQASALYYDEFANLIQ 640
T L+++ S C Q + Y+ F ++++
Sbjct: 578 VANETFCLEIMDSLRRCLSQQADVRLMLYEGFYDVLR 614
>gi|12383082 DNA cross-link repair 1B (PSO2 homolog, S. cerevisiae)
[Homo sapiens]
Length = 532
Score = 34.7 bits (78), Expect = 0.70
Identities = 40/173 (23%), Positives = 68/173 (39%), Gaps = 29/173 (16%)
Query: 1254 AADSQQIHEEKLLYWNMAVRDFSILINLIKVFDSHPVLHVCLKYGRLFVEAFLKQCMPLL 1313
A D +I +L WN +IL K+ SHP +HV +P
Sbjct: 231 AVDHMEICHSNMLRWNQTHPTIAILPTSRKIHSSHPDIHV----------------IPYS 274
Query: 1314 DFSFRKHREDVLSLLETFQLDTRLLHHLCGHSKIHQDTRLTQHVPLLKKTLELLVCRVKA 1373
D S ++ L+ Q+ + CG + R++ VPL+ +++ +
Sbjct: 275 DHSSYSELRAFVAALKPCQVVPIVSRRPCGGFQDSLSPRIS--VPLIPDSVQ------QY 326
Query: 1374 MLTLNNCREAFWL--GNLKNRDLQGEEIKSQNSQESTADESEDDMSSQASKSK 1424
M + + WL LK QG + S E +AD+S+ D S+ +K +
Sbjct: 327 MSSSSRKPSLLWLLERRLKRPRTQGVVFE---SPEESADQSQADRDSKKAKKE 376
>gi|153791497 ciliary rootlet coiled-coil [Homo sapiens]
Length = 2017
Score = 33.9 bits (76), Expect = 1.2
Identities = 24/121 (19%), Positives = 57/121 (47%), Gaps = 6/121 (4%)
Query: 13 KESLTEDASKTRKQPLSKKTKKSHIANEVEENDSIFVKLLKISGIILKTGESQNQLAVDQ 72
+E +T + S+ L T+ + + + EEN + +L ++ ++ ++ +++LA+
Sbjct: 52 REIVTRNLSQPESPVLLPATEMASLLSLQEENQLLQQELSRVEDLLAQSRAERDELAIKY 111
Query: 73 IAFQKKLFQTLRRHPSYPK------IIEEFVSGLESYIEDEDSFRNCLLSCERLQDEEAS 126
A ++L Q LR P + ++ + V E++ S+R L + + Q +A
Sbjct: 112 NAVSERLEQALRLEPGELETQEPRGLVRQSVELRRQLQEEQASYRRKLQAYQEGQQRQAQ 171
Query: 127 M 127
+
Sbjct: 172 L 172
>gi|124248554 melanoma antigen family A, 9 -like [Homo sapiens]
Length = 315
Score = 33.1 bits (74), Expect = 2.0
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 1393 DLQGEEIKSQNSQESTADESEDDMSSQASKSKATEVSLQNPPESGTDGC--ILLIVLSWW 1450
+ QGE++ +QE T +E E SS + + + + +PP+S G + + + W
Sbjct: 17 EAQGEDLGLMGAQEPTGEEEETTSSSDSKEEEVSAAGSSSPPQSPQGGASSSISVYYTLW 76
Query: 1451 SR 1452
S+
Sbjct: 77 SQ 78
>gi|4885473 melanoma antigen family A, 9 [Homo sapiens]
Length = 315
Score = 33.1 bits (74), Expect = 2.0
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 1393 DLQGEEIKSQNSQESTADESEDDMSSQASKSKATEVSLQNPPESGTDGC--ILLIVLSWW 1450
+ QGE++ +QE T +E E SS + + + + +PP+S G + + + W
Sbjct: 17 EAQGEDLGLMGAQEPTGEEEETTSSSDSKEEEVSAAGSSSPPQSPQGGASSSISVYYTLW 76
Query: 1451 SR 1452
S+
Sbjct: 77 SQ 78
>gi|62243696 stromal antigen 1 [Homo sapiens]
Length = 1258
Score = 33.1 bits (74), Expect = 2.0
Identities = 17/74 (22%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 314 SRLQASQVKLKSKGRASSSGNQESSGQSCIILLFDVIKSAIRYEKTISEAWIKAIENTAS 373
SR++A ++ GR ++G+ + +G+ + LF+V+K +++ + WI++ +
Sbjct: 58 SRIEAG---IRGAGRGRANGHPQQNGEGEPVTLFEVVKLGKSAMQSVVDDWIESYKQDRD 114
Query: 374 VSEHKVFDLVMLFI 387
++ + DL+ FI
Sbjct: 115 IA---LLDLINFFI 125
>gi|134948605 ankyrin repeat domain 12 isoform 2 [Homo sapiens]
Length = 2039
Score = 32.7 bits (73), Expect = 2.6
Identities = 22/113 (19%), Positives = 44/113 (38%), Gaps = 19/113 (16%)
Query: 823 QIILEKYLAVTPDYVPPLGNFDVETLDITPHTVTAISAKIRKKGKIERKQKTDGSKTSSS 882
+ + K ++ + +P N D++T +S + ++KGK++RK K +
Sbjct: 409 EALQNKKISTSCSVIPETSNSDMQT-----KKEYVVSGEHKQKGKVKRKLKNQNKNKENQ 463
Query: 883 DTLSEEKNSE--------------CDPTPSHRGQLNKEFTGKEEKTSLLLHNS 921
+ E++ E C G K F+ K++ + L H S
Sbjct: 464 ELKQEKEGKENTRITNLTVNTGLDCSEKTREEGNFRKSFSPKDDTSLHLFHIS 516
>gi|134948558 ankyrin repeat domain 12 isoform 1 [Homo sapiens]
Length = 2062
Score = 32.7 bits (73), Expect = 2.6
Identities = 22/113 (19%), Positives = 44/113 (38%), Gaps = 19/113 (16%)
Query: 823 QIILEKYLAVTPDYVPPLGNFDVETLDITPHTVTAISAKIRKKGKIERKQKTDGSKTSSS 882
+ + K ++ + +P N D++T +S + ++KGK++RK K +
Sbjct: 432 EALQNKKISTSCSVIPETSNSDMQT-----KKEYVVSGEHKQKGKVKRKLKNQNKNKENQ 486
Query: 883 DTLSEEKNSE--------------CDPTPSHRGQLNKEFTGKEEKTSLLLHNS 921
+ E++ E C G K F+ K++ + L H S
Sbjct: 487 ELKQEKEGKENTRITNLTVNTGLDCSEKTREEGNFRKSFSPKDDTSLHLFHIS 539
>gi|46249349 homer 2 isoform 1 [Homo sapiens]
Length = 343
Score = 32.7 bits (73), Expect = 2.6
Identities = 17/72 (23%), Positives = 35/72 (48%)
Query: 861 KIRKKGKIERKQKTDGSKTSSSDTLSEEKNSECDPTPSHRGQLNKEFTGKEEKTSLLLHN 920
++++ KI + + + +TSS+ + + N D SH G N + +K + L
Sbjct: 105 EVKEAAKIAKDKTQEKIETSSNHSQASSVNGTDDEKASHAGPANTHLKSENDKLKIALTQ 164
Query: 921 SHAFFRELDIEV 932
S A ++ +IE+
Sbjct: 165 SAANVKKWEIEL 176
>gi|94557295 mitogen-activated protein kinase 8 interacting protein
3 isoform 2 [Homo sapiens]
Length = 1330
Score = 32.7 bits (73), Expect = 2.6
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 13/79 (16%)
Query: 196 IMQLISIAPENLQHDIITSLPEILGD--------SQHADVGKELSDLLIENTSLTVPILD 247
+ + I ++L H++ T+ E++GD + + +GKE+ +LL+EN+ L L+
Sbjct: 371 VNKAFGINTDSLYHELSTAGSEVIGDVDEGADLLGEFSGMGKEVGNLLLENSQL----LE 426
Query: 248 VLSSLRLDPNFLL-KVRQL 265
++L + N L+ KV QL
Sbjct: 427 TKNALNVVKNDLIAKVDQL 445
>gi|154240686 FYVE, RhoGEF and PH domain containing 6 [Homo sapiens]
Length = 1430
Score = 32.7 bits (73), Expect = 2.6
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Query: 4 KRRLSKSEDKESLTEDASKTRKQPLSKK--------TKKSHIANEVEENDSIFVKLLKI 54
+ + S D++ ++ ++SK PL K +K HIA E+ ++ +FV +LK+
Sbjct: 834 EEEIINSSDEDDVSSESSKGEPDPLEDKQDEDNGMKSKVHHIAKEIMSSEKVFVDVLKL 892
>gi|38327039 heat shock 70kDa protein 4 [Homo sapiens]
Length = 840
Score = 32.3 bits (72), Expect = 3.5
Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 9/118 (7%)
Query: 1 MVSKRRLSKSE-DKESLTEDASKTRKQPLSKKTKKSHIANEVEENDSIFVKLLKISGIIL 59
M+ + +L K D ++ E+ + LS + +K +E + N S +KL +
Sbjct: 604 MIMQDKLEKERNDAKNAVEEYVYEMRDKLSGEYEK--FVSEDDRN-SFTLKLEDTENWLY 660
Query: 60 KTGESQ-NQLAVDQIAFQKKLFQTLR----RHPSYPKIIEEFVSGLESYIEDEDSFRN 112
+ GE Q Q+ VD++A K L Q ++ PK+ EE ++ Y++ SF+N
Sbjct: 661 EDGEDQPKQVYVDKLAELKNLGQPIKIRFQESEERPKLFEELGKQIQQYMKIISSFKN 718
>gi|205360925 mucin 15 isoform c [Homo sapiens]
Length = 311
Score = 32.3 bits (72), Expect = 3.5
Identities = 31/126 (24%), Positives = 54/126 (42%), Gaps = 8/126 (6%)
Query: 1315 FSFRKH----REDVLSLLETFQLDTRLLHHLCG-HSKIHQDTRLTQHVPLLKKTLELLVC 1369
+SF+K + +L+L + + T L G H K +QD TQ++ + KT+E
Sbjct: 15 YSFKKKPIPKKPTMLALAKILLISTLFYSLLSGSHGKENQDINTTQNIAEVFKTMENKPI 74
Query: 1370 RVKAMLTLNNCREAFWLGNLKNRDLQGEEIKSQNSQESTADESEDDMSSQASKS-KATEV 1428
+++ LN+ +E NLK + N+ D S + + + S K T
Sbjct: 75 SLESEANLNSDKENITTSNLKAS--HSPPLNLPNNSHGITDFSSNSSAEHSLGSLKPTST 132
Query: 1429 SLQNPP 1434
+PP
Sbjct: 133 ISTSPP 138
>gi|205360923 mucin 15 isoform a [Homo sapiens]
Length = 361
Score = 32.3 bits (72), Expect = 3.5
Identities = 31/126 (24%), Positives = 54/126 (42%), Gaps = 8/126 (6%)
Query: 1315 FSFRKH----REDVLSLLETFQLDTRLLHHLCG-HSKIHQDTRLTQHVPLLKKTLELLVC 1369
+SF+K + +L+L + + T L G H K +QD TQ++ + KT+E
Sbjct: 15 YSFKKKPIPKKPTMLALAKILLISTLFYSLLSGSHGKENQDINTTQNIAEVFKTMENKPI 74
Query: 1370 RVKAMLTLNNCREAFWLGNLKNRDLQGEEIKSQNSQESTADESEDDMSSQASKS-KATEV 1428
+++ LN+ +E NLK + N+ D S + + + S K T
Sbjct: 75 SLESEANLNSDKENITTSNLKAS--HSPPLNLPNNSHGITDFSSNSSAEHSLGSLKPTST 132
Query: 1429 SLQNPP 1434
+PP
Sbjct: 133 ISTSPP 138
>gi|4504195 general transcription factor IIE, polypeptide 2, beta
34kDa [Homo sapiens]
Length = 291
Score = 32.0 bits (71), Expect = 4.5
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 214 SLPEILGDSQHADVGKELSDLLIENTSLTVPILDVLSSLRLDPNFLLKVRQLVMDKLSSI 273
+L EIL ++QH D+G + L+ + P ++V +D + K + V DK + +
Sbjct: 98 TLDEILDETQHLDIGLKQKQWLMTEALVNNPKIEV-----IDGKYAFKPKYNVRDKKALL 152
Query: 274 RLED 277
RL D
Sbjct: 153 RLLD 156
>gi|5803145 ralA binding protein 1 [Homo sapiens]
Length = 655
Score = 32.0 bits (71), Expect = 4.5
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 16/131 (12%)
Query: 4 KRRLSKSEDKESLTEDASKTRKQPLSKKTKKSHIANEVEENDSIFVKLLKISGIILKTGE 63
KR+L +++ +E T+ A Q ++ +K+ E+ EN+ + LL IL E
Sbjct: 440 KRKLREAKRQECETKIA-----QEIASLSKEDVSKEEMNENEEVINILLAQENEILTEQE 494
Query: 64 ---SQNQLAVDQIAFQKKLFQTLR--------RHPSYPKIIEEFVSGLESYIEDEDSFRN 112
+ Q QIA +K+ + LR R EE+ S ES EDE+ +
Sbjct: 495 ELLAMEQFLRRQIASEKEEIERLRAEIAEIQSRQQHGRSETEEYSSESESESEDEEELQI 554
Query: 113 CLLSCERLQDE 123
L +R +E
Sbjct: 555 ILEDLQRQNEE 565
>gi|90963001 hypothetical protein LOC170063 [Homo sapiens]
Length = 976
Score = 32.0 bits (71), Expect = 4.5
Identities = 19/82 (23%), Positives = 38/82 (46%), Gaps = 5/82 (6%)
Query: 1171 DKEKSNISNDQLHALLCIYLEHTESILKAIEEIAGVGVPELINSPKDASSSTFPTLTRHT 1230
D EK I+ + ++C ++ H + K + I +G+ + +D S + + H
Sbjct: 458 DPEKGKITGGGMVDVMCSFVPHQLGVFKVKQMIEIIGLV----AEEDLQSLSVKSF-HHV 512
Query: 1231 FVVFFRVMMAELEKTVKKIEPG 1252
++ F + A +K V K +PG
Sbjct: 513 YLAFNSICKASTKKVVMKFDPG 534
>gi|110349794 homer 2 isoform 3 [Homo sapiens]
Length = 288
Score = 31.6 bits (70), Expect = 5.9
Identities = 29/124 (23%), Positives = 56/124 (45%), Gaps = 7/124 (5%)
Query: 861 KIRKKGKIERKQKTDGSKTSSSDTLSEEKNSECDPTPSHRGQLNKEFTGKEEKTSLLLHN 920
++++ KI + + + +TSS+ + + N D SH G N + +K + L
Sbjct: 105 EVKEAAKIAKDKTQEKIETSSNHSQASSVNGTDDEKASHAGPANTHLKSENDKLKIALTQ 164
Query: 921 SHAFFRELDIEVFSILHCGLVTKF-ILDTEMHTEATEVVQLGP-----PELLFLLEDLSQ 974
S A + +I + L + L+ E+ + TE+ L P+L+ E +S+
Sbjct: 165 SAANVKN-EINREKEKNTQLKRRIEELEAELREKETELKDLRKQSEIIPQLMSECEYVSE 223
Query: 975 KLES 978
KLE+
Sbjct: 224 KLEA 227
>gi|219842214 protein phosphatase 1, regulatory (inhibitor) subunit
12A isoform b [Homo sapiens]
Length = 943
Score = 31.2 bits (69), Expect = 7.7
Identities = 39/166 (23%), Positives = 66/166 (39%), Gaps = 13/166 (7%)
Query: 1282 IKVFDSHPVLHVCLKYG-----RLFVEAF--LKQCMPLLDFSFRKHREDVLSLLETFQLD 1334
IK +D LH +G R+ V+ ++ + +F ED+L LE Q
Sbjct: 140 IKDYDGWTPLHAAAHWGKEEACRILVDNLCDMEMVNKVGQTAFDVADEDILGYLEELQKK 199
Query: 1335 TRLLHHLCGHSKIHQDTRLTQHVPLLKKTLELLVCRVKAMLTLNNCREAFWLGNLKNRDL 1394
LLH K + + L + + + K L + + A + +L+ +
Sbjct: 200 QNLLH----SEKRDKKSPLIESTANMDNNQSQKTFKNKETLIIEPEKNASRIESLEQEKV 255
Query: 1395 -QGEEIKSQNSQESTADESEDDMSSQASKSKATEV-SLQNPPESGT 1438
+ EE K S S+ ++ EDD S+A K + S+ N S T
Sbjct: 256 DEEEEGKKDESSCSSEEDEEDDSESEAETDKTKPLASVTNANTSST 301
>gi|219842212 protein phosphatase 1, regulatory (inhibitor) subunit
12A isoform a [Homo sapiens]
Length = 1030
Score = 31.2 bits (69), Expect = 7.7
Identities = 39/166 (23%), Positives = 66/166 (39%), Gaps = 13/166 (7%)
Query: 1282 IKVFDSHPVLHVCLKYG-----RLFVEAF--LKQCMPLLDFSFRKHREDVLSLLETFQLD 1334
IK +D LH +G R+ V+ ++ + +F ED+L LE Q
Sbjct: 227 IKDYDGWTPLHAAAHWGKEEACRILVDNLCDMEMVNKVGQTAFDVADEDILGYLEELQKK 286
Query: 1335 TRLLHHLCGHSKIHQDTRLTQHVPLLKKTLELLVCRVKAMLTLNNCREAFWLGNLKNRDL 1394
LLH K + + L + + + K L + + A + +L+ +
Sbjct: 287 QNLLH----SEKRDKKSPLIESTANMDNNQSQKTFKNKETLIIEPEKNASRIESLEQEKV 342
Query: 1395 -QGEEIKSQNSQESTADESEDDMSSQASKSKATEV-SLQNPPESGT 1438
+ EE K S S+ ++ EDD S+A K + S+ N S T
Sbjct: 343 DEEEEGKKDESSCSSEEDEEDDSESEAETDKTKPLASVTNANTSST 388
>gi|4505317 protein phosphatase 1, regulatory (inhibitor) subunit 12A
isoform a [Homo sapiens]
Length = 1030
Score = 31.2 bits (69), Expect = 7.7
Identities = 39/166 (23%), Positives = 66/166 (39%), Gaps = 13/166 (7%)
Query: 1282 IKVFDSHPVLHVCLKYG-----RLFVEAF--LKQCMPLLDFSFRKHREDVLSLLETFQLD 1334
IK +D LH +G R+ V+ ++ + +F ED+L LE Q
Sbjct: 227 IKDYDGWTPLHAAAHWGKEEACRILVDNLCDMEMVNKVGQTAFDVADEDILGYLEELQKK 286
Query: 1335 TRLLHHLCGHSKIHQDTRLTQHVPLLKKTLELLVCRVKAMLTLNNCREAFWLGNLKNRDL 1394
LLH K + + L + + + K L + + A + +L+ +
Sbjct: 287 QNLLH----SEKRDKKSPLIESTANMDNNQSQKTFKNKETLIIEPEKNASRIESLEQEKV 342
Query: 1395 -QGEEIKSQNSQESTADESEDDMSSQASKSKATEV-SLQNPPESGT 1438
+ EE K S S+ ++ EDD S+A K + S+ N S T
Sbjct: 343 DEEEEGKKDESSCSSEEDEEDDSESEAETDKTKPLASVTNANTSST 388
>gi|21269877 cysteinyl-tRNA synthetase isoform a [Homo sapiens]
Length = 726
Score = 31.2 bits (69), Expect = 7.7
Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 19/144 (13%)
Query: 1153 EKIASLARQFLCRVWPSGDKEKSNISNDQLHALLCIYLEHTESILKAIEEIAGVGVPELI 1212
E++ +L Q C ++ + K N L + +YL H I A+EE + +G P +
Sbjct: 516 EEMRALVSQ--CNLYMAARKAVRKRPNQALLENIALYLTHMLKIFGAVEEDSSLGFP--V 571
Query: 1213 NSPKDASSSTFPTLTRHTFVVFFRVMMAELEKTVKKIEPGTAADSQQIHEEKLLYWNMAV 1272
P +L+ V+ + +++E + V+KI A Q++ E +L + A+
Sbjct: 572 GGPG-------TSLSLEATVMPYLQVLSEFREGVRKI-----AREQKVPE--ILQLSDAL 617
Query: 1273 RDFSILINLIKVFDSHPVLHVCLK 1296
RD +IL L F+ H L +K
Sbjct: 618 RD-NILPELGVRFEDHEGLPTVVK 640
>gi|62240994 cysteinyl-tRNA synthetase isoform d [Homo sapiens]
Length = 738
Score = 31.2 bits (69), Expect = 7.7
Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 19/144 (13%)
Query: 1153 EKIASLARQFLCRVWPSGDKEKSNISNDQLHALLCIYLEHTESILKAIEEIAGVGVPELI 1212
E++ +L Q C ++ + K N L + +YL H I A+EE + +G P +
Sbjct: 506 EEMRALVSQ--CNLYMAARKAVRKRPNQALLENIALYLTHMLKIFGAVEEDSSLGFP--V 561
Query: 1213 NSPKDASSSTFPTLTRHTFVVFFRVMMAELEKTVKKIEPGTAADSQQIHEEKLLYWNMAV 1272
P +L+ V+ + +++E + V+KI A Q++ E +L + A+
Sbjct: 562 GGPG-------TSLSLEATVMPYLQVLSEFREGVRKI-----AREQKVPE--ILQLSDAL 607
Query: 1273 RDFSILINLIKVFDSHPVLHVCLK 1296
RD +IL L F+ H L +K
Sbjct: 608 RD-NILPELGVRFEDHEGLPTVVK 630
>gi|62240992 cysteinyl-tRNA synthetase isoform c [Homo sapiens]
Length = 831
Score = 31.2 bits (69), Expect = 7.7
Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 19/144 (13%)
Query: 1153 EKIASLARQFLCRVWPSGDKEKSNISNDQLHALLCIYLEHTESILKAIEEIAGVGVPELI 1212
E++ +L Q C ++ + K N L + +YL H I A+EE + +G P +
Sbjct: 599 EEMRALVSQ--CNLYMAARKAVRKRPNQALLENIALYLTHMLKIFGAVEEDSSLGFP--V 654
Query: 1213 NSPKDASSSTFPTLTRHTFVVFFRVMMAELEKTVKKIEPGTAADSQQIHEEKLLYWNMAV 1272
P +L+ V+ + +++E + V+KI A Q++ E +L + A+
Sbjct: 655 GGPG-------TSLSLEATVMPYLQVLSEFREGVRKI-----AREQKVPE--ILQLSDAL 700
Query: 1273 RDFSILINLIKVFDSHPVLHVCLK 1296
RD +IL L F+ H L +K
Sbjct: 701 RD-NILPELGVRFEDHEGLPTVVK 723
>gi|10835051 cysteinyl-tRNA synthetase isoform b [Homo sapiens]
Length = 748
Score = 31.2 bits (69), Expect = 7.7
Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 19/144 (13%)
Query: 1153 EKIASLARQFLCRVWPSGDKEKSNISNDQLHALLCIYLEHTESILKAIEEIAGVGVPELI 1212
E++ +L Q C ++ + K N L + +YL H I A+EE + +G P +
Sbjct: 516 EEMRALVSQ--CNLYMAARKAVRKRPNQALLENIALYLTHMLKIFGAVEEDSSLGFP--V 571
Query: 1213 NSPKDASSSTFPTLTRHTFVVFFRVMMAELEKTVKKIEPGTAADSQQIHEEKLLYWNMAV 1272
P +L+ V+ + +++E + V+KI A Q++ E +L + A+
Sbjct: 572 GGPG-------TSLSLEATVMPYLQVLSEFREGVRKI-----AREQKVPE--ILQLSDAL 617
Query: 1273 RDFSILINLIKVFDSHPVLHVCLK 1296
RD +IL L F+ H L +K
Sbjct: 618 RD-NILPELGVRFEDHEGLPTVVK 640
>gi|170650672 Leber congenital amaurosis 5 [Homo sapiens]
Length = 697
Score = 31.2 bits (69), Expect = 7.7
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 10/92 (10%)
Query: 4 KRRLSKSEDKESLTEDASKTRKQPLSK------KTKKSHIANEVEENDSIFVKL----LK 53
K RL KS++KE TE K + L + K K+ A + E D + KL LK
Sbjct: 172 KERLRKSQEKERATEKRVKDTESELFRTKFSLQKLKEISEARHLPERDDLAKKLVSAELK 231
Query: 54 ISGIILKTGESQNQLAVDQIAFQKKLFQTLRR 85
+ + E L + +FQ++L +R
Sbjct: 232 LDDTERRIKELSKNLELSTNSFQRQLLAERKR 263
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.134 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,828,316
Number of Sequences: 37866
Number of extensions: 2311474
Number of successful extensions: 7305
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 7267
Number of HSP's gapped (non-prelim): 60
length of query: 1471
length of database: 18,247,518
effective HSP length: 115
effective length of query: 1356
effective length of database: 13,892,928
effective search space: 18838810368
effective search space used: 18838810368
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 69 (31.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.