Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ILVBL Sequence: fasta or formatted (632aa) NCBI GI: 21361361
Description:

ilvB (bacterial acetolactate synthase)-like

Referenced in:

Additional Enzymes and Related Sequences

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.6         73           4
 C cysteine            1.7         11           1
 D aspartate           4.4         28           1
 E glutamate           4.4         28           2
 F phenylalanine       3.8         24           1
 G glycine             9.2         58           2
 H histidine           2.4         15           1
 I isoleucine          3.2         20           3
 K lysine              3.3         21           2
 L leucine            12.5         79           3
 M methionine          1.9         12           1
 N asparagine          2.7         17           1
 P proline             5.9         37           2
 Q glutamine           4.7         30           3
 R arginine            6.2         39           2
 S serine              4.6         29           2
 T threonine           4.1         26           1
 V valine             10.8         68           3
 W tryptophan          1.3          8           1
 Y tyrosine            1.4          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ilvB (bacterial acetolactate synthase)-like 
HACL1                 0.134   2-hydroxyphytanoyl-CoA lyase 
AMOT                  0.008   angiomotin isoform 2 
AMOT                  0.008   angiomotin isoform 1 
FRMPD1                0.007   FERM and PDZ domain containing 1 
AKNA                  0.007   AT-hook transcription factor 
WDR81                 0.006   PREDICTED: WD repeat domain 81 
WDR81                 0.006   PREDICTED: WD repeat domain 81 
WDR81                 0.006   PREDICTED: WD repeat domain 81 
C16orf90              0.006   hypothetical protein LOC646174 
C10orf18              0.005   hypothetical protein LOC54906 
IMMT                  0.004   inner membrane protein, mitochondrial isoform 3 [Ho...
IMMT                  0.004   inner membrane protein, mitochondrial isoform 2 [Ho...
IMMT                  0.004   inner membrane protein, mitochondrial isoform 1 [Ho...
RIN3                  0.004   Ras and Rab interactor 3 
IARS                  0.004   isoleucine tRNA synthetase 
IARS                  0.004   isoleucine tRNA synthetase 
C16orf11              0.004   hypothetical protein LOC146325 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press