Guide to the Human Genome
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Name: ST7L Sequence: fasta or formatted (544aa) NCBI GI: 21264621
Description:

suppression of tumorigenicity 7-like isoform 3

Not currently referenced in the text

Other entries for this name:
alt prot {575aa} suppression of tumorigenicity 7-like isoform 1
alt prot {558aa} suppression of tumorigenicity 7-like isoform 2
alt prot {555aa} suppression of tumorigenicity 7-like isoform 4
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.9         54           3
 C cysteine            1.8         10           1
 D aspartate           2.9         16           2
 E glutamate           7.4         40           3
 F phenylalanine       4.4         24           2
 G glycine             5.7         31           2
 H histidine           2.9         16           2
 I isoleucine          4.8         26           1
 K lysine              4.4         24           2
 L leucine            11.9         65           2
 M methionine          2.0         11           1
 N asparagine          3.5         19           2
 P proline             5.1         28           2
 Q glutamine           4.0         22           2
 R arginine            6.1         33           2
 S serine              7.0         38           2
 T threonine           6.1         33           2
 V valine              4.8         26           1
 W tryptophan          2.0         11           2
 Y tyrosine            3.1         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   suppression of tumorigenicity 7-like isoform 3 [Homo... 
ST7L                  0.985   suppression of tumorigenicity 7-like isoform 1 [Homo...
ST7L                  0.945   suppression of tumorigenicity 7-like isoform 2 [Homo...
ST7L                  0.924   suppression of tumorigenicity 7-like isoform 4 [Homo...
ST7                   0.678   suppression of tumorigenicity 7 isoform a 
ST7                   0.673   suppression of tumorigenicity 7 isoform b 
KRT72                 0.007   keratin 72 isoform 2 
OSBP2                 0.006   oxysterol binding protein 2 isoform a 
CALML6                0.006   calmodulin-like 6 
PPFIA3                0.005   PTPRF interacting protein alpha 3 
CCDC13                0.005   coiled-coil domain containing 13 
TAF7L                 0.005   TATA box binding protein-associated factor, RNA poly...
ADAMTS4               0.005   ADAM metallopeptidase with thrombospondin type 1 mo...
PDE4DIP               0.005   phosphodiesterase 4D interacting protein isoform 2 [...
PDE4DIP               0.005   phosphodiesterase 4D interacting protein isoform 5 [...
PDE4DIP               0.005   phosphodiesterase 4D interacting protein isoform 1 ...
PIGZ                  0.005   phosphatidylinositol glycan anchor biosynthesis, cla...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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