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Search of human proteins with 207113149
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|207113149 haloacid dehalogenase-like hydrolase domain
containing 1A isoform a [Homo sapiens]
(251 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|207113149 haloacid dehalogenase-like hydrolase domain contain... 500 e-142
gi|197382691 haloacid dehalogenase-like hydrolase domain contain... 442 e-124
gi|22907049 aldehyde dehydrogenase 3A1 [Homo sapiens] 32 0.40
gi|206597441 aldehyde dehydrogenase 3A1 [Homo sapiens] 32 0.40
gi|206597439 aldehyde dehydrogenase 3A1 [Homo sapiens] 32 0.40
gi|48255900 SWI/SNF-related matrix-associated actin-dependent re... 31 0.89
gi|48255898 SWI/SNF-related matrix-associated actin-dependent re... 31 0.89
gi|7705433 eukaryotic translation initiation factor 3 subunit 6 ... 31 1.2
gi|14589929 protocadherin 18 precursor [Homo sapiens] 31 1.2
gi|7706501 WW domain binding protein 11 [Homo sapiens] 30 2.6
gi|34878777 ring finger protein 20 [Homo sapiens] 29 3.4
gi|33188443 microfilament and actin filament cross-linker protei... 28 5.8
gi|33188445 microfilament and actin filament cross-linker protei... 28 5.8
gi|157388908 hypothetical protein LOC54954 [Homo sapiens] 28 7.6
gi|192807323 SWI/SNF-related matrix-associated actin-dependent r... 28 9.9
gi|192807320 SWI/SNF-related matrix-associated actin-dependent r... 28 9.9
gi|192807318 SWI/SNF-related matrix-associated actin-dependent r... 28 9.9
gi|192807316 SWI/SNF-related matrix-associated actin-dependent r... 28 9.9
gi|192807314 SWI/SNF-related matrix-associated actin-dependent r... 28 9.9
gi|192807312 SWI/SNF-related matrix-associated actin-dependent r... 28 9.9
gi|21071056 SWI/SNF-related matrix-associated actin-dependent re... 28 9.9
gi|6912286 caspase 14 precursor [Homo sapiens] 28 9.9
gi|48928019 Nedd4 binding protein 1 [Homo sapiens] 28 9.9
gi|41327779 DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Homo sapi... 28 9.9
gi|30260188 Golgi autoantigen, golgin subfamily a, 5 [Homo sapiens] 28 9.9
>gi|207113149 haloacid dehalogenase-like hydrolase domain containing
1A isoform a [Homo sapiens]
Length = 251
Score = 500 bits (1288), Expect = e-142
Identities = 251/251 (100%), Positives = 251/251 (100%)
Query: 1 MAAPPQPVTHLIFDMDGLLLGYTGSIVAAASGESSRGLQSRWTDTERLYSVVFQEICNRY 60
MAAPPQPVTHLIFDMDGLLLGYTGSIVAAASGESSRGLQSRWTDTERLYSVVFQEICNRY
Sbjct: 1 MAAPPQPVTHLIFDMDGLLLGYTGSIVAAASGESSRGLQSRWTDTERLYSVVFQEICNRY 60
Query: 61 DKKYSWDVKSLVMGKKALEAAQIIIDVLQLPMSKEELVEESQTKLKEVFPTAALMPGAEK 120
DKKYSWDVKSLVMGKKALEAAQIIIDVLQLPMSKEELVEESQTKLKEVFPTAALMPGAEK
Sbjct: 61 DKKYSWDVKSLVMGKKALEAAQIIIDVLQLPMSKEELVEESQTKLKEVFPTAALMPGAEK 120
Query: 121 LIIHLRKHGIPFALATSSGSASFDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLA 180
LIIHLRKHGIPFALATSSGSASFDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLA
Sbjct: 121 LIIHLRKHGIPFALATSSGSASFDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLA 180
Query: 181 CAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQDF 240
CAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQDF
Sbjct: 181 CAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQDF 240
Query: 241 QPELFGLPSYE 251
QPELFGLPSYE
Sbjct: 241 QPELFGLPSYE 251
>gi|197382691 haloacid dehalogenase-like hydrolase domain containing
1A isoform b [Homo sapiens]
Length = 228
Score = 442 bits (1138), Expect = e-124
Identities = 228/251 (90%), Positives = 228/251 (90%), Gaps = 23/251 (9%)
Query: 1 MAAPPQPVTHLIFDMDGLLLGYTGSIVAAASGESSRGLQSRWTDTERLYSVVFQEICNRY 60
MAAPPQPVTHLIFDMDGLLL DTERLYSVVFQEICNRY
Sbjct: 1 MAAPPQPVTHLIFDMDGLLL-----------------------DTERLYSVVFQEICNRY 37
Query: 61 DKKYSWDVKSLVMGKKALEAAQIIIDVLQLPMSKEELVEESQTKLKEVFPTAALMPGAEK 120
DKKYSWDVKSLVMGKKALEAAQIIIDVLQLPMSKEELVEESQTKLKEVFPTAALMPGAEK
Sbjct: 38 DKKYSWDVKSLVMGKKALEAAQIIIDVLQLPMSKEELVEESQTKLKEVFPTAALMPGAEK 97
Query: 121 LIIHLRKHGIPFALATSSGSASFDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLA 180
LIIHLRKHGIPFALATSSGSASFDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLA
Sbjct: 98 LIIHLRKHGIPFALATSSGSASFDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLA 157
Query: 181 CAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQDF 240
CAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQDF
Sbjct: 158 CAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQDF 217
Query: 241 QPELFGLPSYE 251
QPELFGLPSYE
Sbjct: 218 QPELFGLPSYE 228
>gi|22907049 aldehyde dehydrogenase 3A1 [Homo sapiens]
Length = 453
Score = 32.3 bits (72), Expect = 0.40
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Query: 76 KALEAAQIIIDVLQLPMSKEELVEESQTKLKEVFPTAALMPGAEKLIIHLRKHGIPFALA 135
++LE A I+ + P++ + K + T++ A +I+H+ H +PF
Sbjct: 346 RSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLPFGGV 405
Query: 136 TSSGSASFDMKTSRHKEFFSLFSH 159
+SG S+ K S F FSH
Sbjct: 406 GNSGMGSYHGKKS-----FETFSH 424
>gi|206597441 aldehyde dehydrogenase 3A1 [Homo sapiens]
Length = 453
Score = 32.3 bits (72), Expect = 0.40
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Query: 76 KALEAAQIIIDVLQLPMSKEELVEESQTKLKEVFPTAALMPGAEKLIIHLRKHGIPFALA 135
++LE A I+ + P++ + K + T++ A +I+H+ H +PF
Sbjct: 346 RSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLPFGGV 405
Query: 136 TSSGSASFDMKTSRHKEFFSLFSH 159
+SG S+ K S F FSH
Sbjct: 406 GNSGMGSYHGKKS-----FETFSH 424
>gi|206597439 aldehyde dehydrogenase 3A1 [Homo sapiens]
Length = 453
Score = 32.3 bits (72), Expect = 0.40
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Query: 76 KALEAAQIIIDVLQLPMSKEELVEESQTKLKEVFPTAALMPGAEKLIIHLRKHGIPFALA 135
++LE A I+ + P++ + K + T++ A +I+H+ H +PF
Sbjct: 346 RSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLPFGGV 405
Query: 136 TSSGSASFDMKTSRHKEFFSLFSH 159
+SG S+ K S F FSH
Sbjct: 406 GNSGMGSYHGKKS-----FETFSH 424
>gi|48255900 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a2 isoform a [Homo sapiens]
Length = 1590
Score = 31.2 bits (69), Expect = 0.89
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 166 PEVQHGKPDPDIFLACAK-RFSP---PPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGN 221
P+ G+P P + L + R SP P ++ + ++ ++A +A +Q + G+
Sbjct: 308 PQPAPGQPSPVLQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLPGS 367
Query: 222 LSRDLTTKATLVLNSLQ--DFQPEL 244
L DL TKAT+ L +L+ +FQ +L
Sbjct: 368 LPPDLRTKATVELKALRLLNFQRQL 392
>gi|48255898 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a2 isoform b [Homo sapiens]
Length = 1572
Score = 31.2 bits (69), Expect = 0.89
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 166 PEVQHGKPDPDIFLACAK-RFSP---PPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGN 221
P+ G+P P + L + R SP P ++ + ++ ++A +A +Q + G+
Sbjct: 308 PQPAPGQPSPVLQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLPGS 367
Query: 222 LSRDLTTKATLVLNSLQ--DFQPEL 244
L DL TKAT+ L +L+ +FQ +L
Sbjct: 368 LPPDLRTKATVELKALRLLNFQRQL 392
>gi|7705433 eukaryotic translation initiation factor 3 subunit 6
interacting protein [Homo sapiens]
Length = 564
Score = 30.8 bits (68), Expect = 1.2
Identities = 32/148 (21%), Positives = 64/148 (43%), Gaps = 13/148 (8%)
Query: 31 SGESSRGLQSRWTDTERLYSVVFQEICNRYDKKYSWDVKSLVMGKK-ALEAAQIIIDVLQ 89
+G+ + L ++ Y V+ E+ + + + V L+ K L+A+++ DV+
Sbjct: 27 TGDPKQDLAYERQYEQQTYQVI-PEVIKNFIQYFHKTVSDLIDQKVYELQASRVSSDVID 85
Query: 90 LPMSK-EELVEESQTKLKEVFPTAALMPGAEKLIIHLRKHGIPFAL----------ATSS 138
+ + +++ E S TKL E F P AE + + + L A S
Sbjct: 86 QKVYEIQDIYENSWTKLTERFFKNTPWPEAEAIAPQVGNDAVFLILYKELYYRHIYAKVS 145
Query: 139 GSASFDMKTSRHKEFFSLFSHIVLGDDP 166
G S + + + + +LF++I+ D P
Sbjct: 146 GGPSLEQRFESYYNYCNLFNYILNADGP 173
>gi|14589929 protocadherin 18 precursor [Homo sapiens]
Length = 1135
Score = 30.8 bits (68), Expect = 1.2
Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 7 PVTHLIFDMDGLLL--GYTGSIVAAASGESSRGLQSRWT-DTERLYSVVFQEICNRYDKK 63
PV L+ D++ G G IV + S S + + D+ER + +F+++ K
Sbjct: 260 PVGTLLLDLNATDPDEGANGKIVYSFSSHVSPKIMETFKIDSERGHLTLFKQVDYEITKS 319
Query: 64 YSWDVKSLVMGKKALEA-AQIIIDVLQLPMSKEEL 97
Y DV++ +G ++ A +III V+ + +K E+
Sbjct: 320 YEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEI 354
>gi|7706501 WW domain binding protein 11 [Homo sapiens]
Length = 641
Score = 29.6 bits (65), Expect = 2.6
Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 12/157 (7%)
Query: 67 DVKSLVMGKKALEAAQIIIDVLQLPMSKEELVEESQTKLKEVFPTAALMPGAEKLIIH-- 124
D K ++ + L+ + + +Q P E+++++ + KL+E F + E I+
Sbjct: 49 DPKQIIRDMEKLDEMEF--NPVQQPQLNEKVLKDKRKKLRETFERILRLYEKENPDIYKE 106
Query: 125 LRKHGIPFALATSSGSASFD-MKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACAK 183
LRK + + + S FD +K ++H E S I L D P DI L A+
Sbjct: 107 LRKLEVEYEQKRAQLSQYFDAVKNAQHVEVES----IPLPDMPHAPSNILIQDIPLPGAQ 162
Query: 184 RFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDG 220
PP ++K + V G V +P G
Sbjct: 163 ---PPSILKKTSAYGPPTRAVSILPLLGHGVPRLPPG 196
>gi|34878777 ring finger protein 20 [Homo sapiens]
Length = 975
Score = 29.3 bits (64), Expect = 3.4
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 9/58 (15%)
Query: 61 DKKYSWDVKSLVMGK-KALEAAQIIIDV---LQLPMSK-----EELVEESQTKLKEVF 109
+K+ ++L M K KA+EAAQ+ D+ L+L K +E+VE S TK K++F
Sbjct: 820 EKELGLRTQALEMNKRKAMEAAQLADDLKAQLELAQKKLHDFQDEIVENSVTKEKDMF 877
>gi|33188443 microfilament and actin filament cross-linker protein
isoform b [Homo sapiens]
Length = 5938
Score = 28.5 bits (62), Expect = 5.8
Identities = 46/209 (22%), Positives = 85/209 (40%), Gaps = 35/209 (16%)
Query: 26 IVAAASGESSRGLQSRWTDTERLYSVVFQEICNRYDK---------KYSWDVKSLVMG-- 74
+++ GE R LQ++ + + + + ++ +R + KY W V+ LV
Sbjct: 3301 LLSVPPGEEKRTLQNQLVELKNHWEELSKKTADRQSRLKDCMQKAQKYQWHVEDLVPWIE 3360
Query: 75 --KKALEAAQIIIDVLQLP----MSKEELVE-ESQTKLKEVFPTAA--LMPGA------- 118
K + ++ +D +QL SK L E E + L E+ +AA L+ +
Sbjct: 3361 DCKAKMSELRVTLDPVQLESSLLRSKAMLNEVEKRRSLLEILNSAADILINSSEADEDGI 3420
Query: 119 --EKLIIHLRKHGIPFALATSSGSASFDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPD 176
EK I+ + L +G S + T R +EF F +I + +V+ K +
Sbjct: 3421 RDEKAGINQNMDAVTEELQAKTG--SLEEMTQRLREFQESFKNI----EKKVEGAKHQLE 3474
Query: 177 IFLACAKRFSPPPAMEKCLVFEDAPNGVE 205
IF A + +EK ++ +E
Sbjct: 3475 IFDALGSQACSNKNLEKLRAQQEVLQALE 3503
>gi|33188445 microfilament and actin filament cross-linker protein
isoform a [Homo sapiens]
Length = 5430
Score = 28.5 bits (62), Expect = 5.8
Identities = 46/209 (22%), Positives = 85/209 (40%), Gaps = 35/209 (16%)
Query: 26 IVAAASGESSRGLQSRWTDTERLYSVVFQEICNRYDK---------KYSWDVKSLVMG-- 74
+++ GE R LQ++ + + + + ++ +R + KY W V+ LV
Sbjct: 2799 LLSVPPGEEKRTLQNQLVELKNHWEELSKKTADRQSRLKDCMQKAQKYQWHVEDLVPWIE 2858
Query: 75 --KKALEAAQIIIDVLQLP----MSKEELVE-ESQTKLKEVFPTAA--LMPGA------- 118
K + ++ +D +QL SK L E E + L E+ +AA L+ +
Sbjct: 2859 DCKAKMSELRVTLDPVQLESSLLRSKAMLNEVEKRRSLLEILNSAADILINSSEADEDGI 2918
Query: 119 --EKLIIHLRKHGIPFALATSSGSASFDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPD 176
EK I+ + L +G S + T R +EF F +I + +V+ K +
Sbjct: 2919 RDEKAGINQNMDAVTEELQAKTG--SLEEMTQRLREFQESFKNI----EKKVEGAKHQLE 2972
Query: 177 IFLACAKRFSPPPAMEKCLVFEDAPNGVE 205
IF A + +EK ++ +E
Sbjct: 2973 IFDALGSQACSNKNLEKLRAQQEVLQALE 3001
>gi|157388908 hypothetical protein LOC54954 [Homo sapiens]
Length = 1096
Score = 28.1 bits (61), Expect = 7.6
Identities = 34/129 (26%), Positives = 51/129 (39%), Gaps = 20/129 (15%)
Query: 75 KKALEAAQIIIDVLQLPMSKEELVEESQTKLKEVFPTAALMPGAEKLI---IHLRKHGIP 131
+K A + +D+L+L + ++ Q +++ PTAAL PGA + + L+ P
Sbjct: 11 EKRCPGAVVPVDLLKLARTVSRQ-QQQQHLHRQLPPTAALAPGAPRAARGSVPLQPPLPP 69
Query: 132 FALATSSGSASFDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACAKRFSPPPAM 191
AL SG A RH F H HG+ P + PPP +
Sbjct: 70 AALGAYSGGAG----PIRHHHPAHHFHH----------HGQAQPGLHPPLPP--PPPPQL 113
Query: 192 EKCLVFEDA 200
V DA
Sbjct: 114 PGARVLVDA 122
>gi|192807323 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform A [Homo sapiens]
Length = 1679
Score = 27.7 bits (60), Expect = 9.9
Identities = 17/59 (28%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 188 PPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQ--DFQPEL 244
P ++ + ++ ++A +A +Q + G+L+ DL TKAT+ L +L+ +FQ +L
Sbjct: 358 PRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQL 416
>gi|192807320 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform F [Homo sapiens]
Length = 1613
Score = 27.7 bits (60), Expect = 9.9
Identities = 17/59 (28%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 188 PPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQ--DFQPEL 244
P ++ + ++ ++A +A +Q + G+L+ DL TKAT+ L +L+ +FQ +L
Sbjct: 358 PRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQL 416
>gi|192807318 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform E [Homo sapiens]
Length = 1614
Score = 27.7 bits (60), Expect = 9.9
Identities = 17/59 (28%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 188 PPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQ--DFQPEL 244
P ++ + ++ ++A +A +Q + G+L+ DL TKAT+ L +L+ +FQ +L
Sbjct: 358 PRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQL 416
>gi|192807316 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform D [Homo sapiens]
Length = 1616
Score = 27.7 bits (60), Expect = 9.9
Identities = 17/59 (28%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 188 PPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQ--DFQPEL 244
P ++ + ++ ++A +A +Q + G+L+ DL TKAT+ L +L+ +FQ +L
Sbjct: 358 PRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQL 416
>gi|192807314 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform C [Homo sapiens]
Length = 1617
Score = 27.7 bits (60), Expect = 9.9
Identities = 17/59 (28%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 188 PPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQ--DFQPEL 244
P ++ + ++ ++A +A +Q + G+L+ DL TKAT+ L +L+ +FQ +L
Sbjct: 358 PRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQL 416
>gi|192807312 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 27.7 bits (60), Expect = 9.9
Identities = 17/59 (28%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 188 PPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQ--DFQPEL 244
P ++ + ++ ++A +A +Q + G+L+ DL TKAT+ L +L+ +FQ +L
Sbjct: 358 PRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQL 416
>gi|21071056 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 27.7 bits (60), Expect = 9.9
Identities = 17/59 (28%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 188 PPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQ--DFQPEL 244
P ++ + ++ ++A +A +Q + G+L+ DL TKAT+ L +L+ +FQ +L
Sbjct: 358 PRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQL 416
>gi|6912286 caspase 14 precursor [Homo sapiens]
Length = 242
Score = 27.7 bits (60), Expect = 9.9
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 42 WTDTERLYSVVFQEICNRYDKKYSWDVKSL--VMGKKALEAAQIIIDVLQLPMSKEELVE 99
+TD +YS V I R+D+K S +++L V K+ +++ +V + M++ ELV+
Sbjct: 162 YTDALHVYSTVEGYIAYRHDQKGSCFIQTLVDVFTKRKGHILELLTEVTR-RMAEAELVQ 220
Query: 100 ESQTK 104
E + +
Sbjct: 221 EGKAR 225
>gi|48928019 Nedd4 binding protein 1 [Homo sapiens]
Length = 896
Score = 27.7 bits (60), Expect = 9.9
Identities = 12/39 (30%), Positives = 24/39 (61%)
Query: 80 AAQIIIDVLQLPMSKEELVEESQTKLKEVFPTAALMPGA 118
AA+ ++D P K EL+E+S+ +++ +F + + GA
Sbjct: 2 AARAVLDEFTAPAEKAELLEQSRGRIEGLFGVSLAVLGA 40
>gi|41327779 DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Homo
sapiens]
Length = 600
Score = 27.7 bits (60), Expect = 9.9
Identities = 12/45 (26%), Positives = 26/45 (57%)
Query: 84 IIDVLQLPMSKEELVEESQTKLKEVFPTAALMPGAEKLIIHLRKH 128
+I +L++ + +EE +++SQ + PT L ++++ H KH
Sbjct: 64 VIPILEILLRREEKLKKSQVGAIIITPTRELAIQIDEVLSHFTKH 108
>gi|30260188 Golgi autoantigen, golgin subfamily a, 5 [Homo sapiens]
Length = 731
Score = 27.7 bits (60), Expect = 9.9
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Query: 82 QIIIDVLQLPMSKEELVEESQTKLKEVFPTAALMPGAEKLIIHLRKHGIPFALATSSGSA 141
Q+ + L L SK+EL++ Q + ++ EKLI L K G F SS ++
Sbjct: 413 QVKLYKLNLESSKQELIDYKQKATR-------ILQSKEKLINSL-KEGSGFEGLDSSTAS 464
Query: 142 SFDMKTSRHKE 152
S +++ RH++
Sbjct: 465 SMELEELRHEK 475
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.134 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,989,722
Number of Sequences: 37866
Number of extensions: 431753
Number of successful extensions: 915
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 907
Number of HSP's gapped (non-prelim): 25
length of query: 251
length of database: 18,247,518
effective HSP length: 100
effective length of query: 151
effective length of database: 14,460,918
effective search space: 2183598618
effective search space used: 2183598618
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.